GenePage for the casD gene of Escherichia coli K-12

Primary Gene Name: casD
EcoGene Accession Number: EG13116
K-12 Gene Accession Number: ECK2752
MG1655 Gene Identifier: b2757
Gene Name Mnemonic: CRISPR-associated
Alternate Gene Symbols: cas5; ygcI
Description: CRISPR RNA (crRNA) containing Cascade antiviral complex
  # bp Upstream # bp Downstream
MW: 25208.80 ---------224 aa Pre-Run BlastP UniProt
Pre-Run BlastP NR+Env
Left End: 2880374
Left Intergenic Region

Name: casE_casD

Length: 14 bp overlap

Orientation: Codirectional-

Left_end: 2880374

Right_end: 2880387

Centisome: 62.05

Genomic Address
Counterclockwise
Minute or Centisome (%) = 62.05
Right End: 2881048
Right Intergenic Region

Name: casD_casC

Length: 2 bp gap

Orientation: Codirectional-

Left_end: 2881049

Right_end: 2881050

Centisome: 62.07

The Cascade antiviral complex is comprised of CasABCDE and short CRISPR RNAs (crRNAs) and requires the predicted helicase YgcB(Cas3) for activity (Brouns, 2008).

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BamHI EcoRI HindIII