GenePage for the hokD gene of Escherichia coli K-12

Primary Gene Name: hokD
EcoGene Accession Number: EG11130
K-12 Gene Accession Number: ECK1556
MG1655 Gene Identifier: b1562
Gene Name Mnemonic: Host killing
Alternate Gene Symbols: relF
Description: Small toxic membrane polypeptide, Qin prophage; homologous to plasmid-encoded plasmid stabilization toxins regulated by antisense RNA; functional relevance of chromosomal homologs is unknown
  # bp Upstream # bp Downstream
MW: 5736.89 ---------51 aa Pre-Run BlastP UniProt
Pre-Run BlastP NR+Env
Left End: 1645119
Left Intergenic Region

Name: rem_hokD

Length: 216 bp gap

Orientation: Codirectional-

Left_end: 1644903

Right_end: 1645118

Centisome: 35.44

Genomic Address
Counterclockwise
Minute or Centisome (%) = 35.44
Right End: 1645274
Right Intergenic Region

Name: hokD_relE

Length: 71 bp gap

Orientation: Codirectional-

Left_end: 1645275

Right_end: 1645345

Centisome: 35.45

hokD regulatory elements are apparently deleted in K-12 and hokD is fused to relBE transcript.

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BamHI EcoRI HindIII