Blast performed on February-4-2012
BLASTP 2.2.24+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: nr_env
20,512,688 sequences; 6,167,035,527 total letters
Query= EG14471 ibsE
Length=19
***** No hits found *****
Lambda K H
0.346 0.158 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 117173675013
Database: nr_env
Posted date: Feb 1, 2012 7:14 AM
Number of letters in database: 6,167,035,527
Number of sequences in database: 20,512,688
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40