Blast performed on February-4-2012
BLASTP 2.2.24+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: nr_env
20,512,688 sequences; 6,167,035,527 total letters
Query= EG14302 hokE
Length=50
Score E
Sequences producing significant alignments: (Bits) Value
dbj|BAI54052.1| conserved hypothetical protein [Escherichia coli... 101 5e-20
ref|YP_001879244.1| Hok/Gef family protein [Shigella boydii CDC ... 101 5e-20
ref|YP_001457392.1| Hok/Gef family protein [Escherichia coli HS]... 101 5e-20
ref|YP_002328055.1| regulatory protein MokC for HokC 2 [Escheric... 101 6e-20
gb|EGB54535.1| hok/gef family protein [Escherichia coli H489] 100 7e-20
ref|YP_001879242.1| Hok/Gef family protein [Shigella boydii CDC ... 100 8e-20
ref|ZP_07146007.1| Hok/gef family protein [Escherichia coli MS 1... 100 9e-20
ref|ZP_07222092.1| Hok/gef family protein [Escherichia coli MS 7... 100 1e-19
ref|ZP_07143056.1| Hok/gef family protein [Escherichia coli MS 1... 100 1e-19
ref|YP_025295.1| toxic polypeptide, small [Escherichia coli str.... 99.8 1e-19
ref|ZP_08372876.1| conserved domain protein [Escherichia coli TA... 99.8 1e-19
ref|YP_001879248.1| Hok/Gef family protein [Shigella boydii CDC ... 99.4 2e-19
ref|NP_836210.1| hypothetical protein S0500 [Shigella flexneri 2... 99.4 2e-19
ref|YP_002383633.1| small toxic membrane polypeptide, HokE-like ... 99.4 2e-19
ref|NP_286308.1| hypothetical protein Z0722 [Escherichia coli O1... 99.4 2e-19
ref|ZP_07154320.1| Hok/gef family protein [Escherichia coli MS 2... 99.4 2e-19
ref|YP_002291921.1| hypothetical protein ECSE_0646 [Escherichia ... 98.6 3e-19
ref|YP_668540.1| hypothetical protein ECP_0613 [Escherichia coli... 98.6 3e-19
ref|ZP_03031064.1| Hok/Gef family protein [Escherichia coli B7A]... 98.2 4e-19
ref|ZP_02804074.1| Hok/Gef family protein [Escherichia coli O157... 98.2 4e-19
ref|ZP_08352607.1| conserved domain protein [Escherichia coli M7... 97.8 5e-19
gb|EFX27672.1| Hok/Gef family protein [Escherichia coli O55:H7 s... 97.4 7e-19
gb|EGB62945.1| hok/gef family protein [Escherichia coli M863] >g... 97.4 7e-19
gb|EFX22405.1| Hok/Gef family protein [Escherichia coli O55:H7 s... 97.1 8e-19
ref|ZP_08362868.1| conserved domain protein [Escherichia coli TA... 97.1 1e-18
gb|EGB62943.1| hok/gef family protein [Escherichia coli M863] >g... 97.1 1e-18
ref|NP_286307.1| hypothetical protein Z0721 [Escherichia coli O1... 96.7 1e-18
ref|ZP_07680615.1| hok/gef family protein [Shigella dysenteriae ... 96.7 1e-18
gb|EFZ44749.1| hok/gef family protein [Escherichia coli E128010] 95.9 2e-18
gb|EFU50703.1| Hok/gef family protein [Escherichia coli MS 153-1] 95.9 2e-18
ref|NP_836209.1| hypothetical protein S0499 [Shigella flexneri 2... 95.9 2e-18
gb|EFX27568.1| Hok/Gef family protein [Escherichia coli O55:H7 s... 95.5 3e-18
ref|ZP_07188882.1| Hok/gef family protein [Escherichia coli MS 6... 95.5 3e-18
gb|EGB62944.1| hok/gef family protein [Escherichia coli M863] >g... 95.5 3e-18
ref|ZP_06652546.1| conserved hypothetical protein [Escherichia c... 95.1 3e-18
ref|ZP_02902179.1| Hok/Gef family protein [Escherichia albertii ... 95.1 4e-18
ref|NP_308647.1| hypothetical protein ECs0620 [Escherichia coli ... 94.7 4e-18
gb|EFX31969.1| Hok/Gef family protein [Escherichia coli O157:H7 ... 94.0 8e-18
ref|YP_003364210.1| host cell-killing modulation protein [Citrob... 91.7 4e-17
ref|YP_001336726.1| small toxic membrane polypeptide [Klebsiella... 85.9 2e-15
ref|YP_002236897.1| Hok/Gef family protein [Klebsiella pneumonia... 85.5 3e-15
ref|YP_003500907.1| Small toxic membrane polypeptide [Escherichi... 84.7 5e-15
ref|YP_001881499.1| hok/gef family protein [Shigella boydii CDC ... 84.7 5e-15
ref|YP_002920949.1| small toxic membrane polypeptide [Klebsiella... 84.0 8e-15
ref|ZP_07115210.1| Hok/gef family protein [Escherichia coli MS 1... 84.0 8e-15
ref|NP_289311.1| hypothetical protein Z4071 [Escherichia coli O1... 84.0 9e-15
ref|YP_003940501.1| Hok/gef cell toxic protein [Enterobacter clo... 80.5 8e-14
gb|EFZ49828.1| hok/gef family protein [Shigella sonnei 53G] >gb|... 79.0 2e-13
ref|ZP_08306187.1| Hok/gef family protein [Klebsiella sp. MS 92-... 72.4 2e-11
ref|ZP_07222091.1| Hok/gef family protein [Escherichia coli MS 7... 70.9 7e-11
ref|ZP_07143057.1| Hok/gef family protein [Escherichia coli MS 1... 70.5 1e-10
ref|ZP_02900778.1| conserved domain protein [Escherichia alberti... 66.2 2e-09
ref|YP_001144366.1| hypothetical protein ASA_P5G151 [Aeromonas s... 55.5 3e-06
gb|ADA75900.1| putative membrane permeability altering protein [... 49.7 2e-04
ref|YP_001812480.1| post-segregation killing protein [Proteus mi... 48.9 3e-04
ref|ZP_08350474.1| conserved domain protein [Escherichia coli M6... 47.8 7e-04
ref|YP_003367662.1| small toxic membrane protein HokA [Citrobact... 47.4 8e-04
ref|ZP_07143768.1| Hok/gef family protein [Escherichia coli MS 1... 46.2 0.002
ref|ZP_07164784.1| Hok/gef family protein [Escherichia coli MS 1... 46.2 0.002
ref|ZP_08303544.1| Hok/gef family protein [Klebsiella sp. MS 92-... 45.8 0.003
ref|ZP_07136872.1| Hok/gef family protein [Escherichia coli MS 1... 45.4 0.003
ref|YP_543057.1| small toxic polypeptide [Escherichia coli UTI89... 45.4 0.003
ref|YP_026229.1| toxic polypeptide, small [Escherichia coli str.... 45.4 0.003
ref|YP_312608.1| small toxic polypeptide [Shigella sonnei Ss046]... 45.4 0.003
ref|ZP_06551228.1| small toxic polypeptide [Klebsiella sp. 1_1_5... 45.1 0.004
ref|YP_003437125.1| Hok/gef cell toxic protein [Klebsiella varii... 45.1 0.005
ref|YP_001144316.1| SrnB protein [Aeromonas salmonicida subsp. s... 45.1 0.005
ref|YP_409869.1| small toxic polypeptide [Shigella boydii Sb227]... 45.1 0.005
ref|ZP_07593915.1| Hok/gef cell toxic protein [Escherichia coli ... 45.1 0.005
ref|ZP_08394538.1| small toxic polypeptide [Shigella sp. D9] >gb... 44.7 0.005
ref|ZP_08385806.1| conserved domain protein [Escherichia coli H2... 44.7 0.005
gb|EFZ68115.1| protein pndA [Escherichia coli 1357] 44.7 0.006
ref|NP_290142.1| small toxic polypeptide [Escherichia coli O157:... 44.7 0.006
ref|ZP_04872797.1| conserved hypothetical protein [Escherichia s... 44.7 0.006
ref|ZP_07172293.1| Hok/gef family protein [Escherichia coli MS 2... 44.7 0.006
ref|YP_001745843.1| small toxic polypeptide [Escherichia coli SM... 44.3 0.007
ref|YP_001465033.1| small toxic polypeptide [Escherichia coli E2... 44.3 0.007
ref|ZP_04621153.1| hypothetical protein yaldo0001_36870 [Yersini... 44.3 0.007
ref|YP_002295106.1| small toxic polypeptide [Escherichia coli SE... 44.3 0.007
ref|YP_001337574.1| small toxic polypeptide [Klebsiella pneumoni... 44.3 0.008
ref|ZP_04627665.1| hypothetical protein yberc0001_14270 [Yersini... 44.3 0.008
ref|ZP_06658909.1| srnB protein [Escherichia coli B185] >gb|EFF0... 43.9 0.009
ref|ZP_03049409.1| protein hokA [Escherichia coli E110019] >ref|... 43.9 0.009
ref|ZP_07104706.1| Hok/gef family protein [Escherichia coli MS 1... 43.9 0.009
ref|NP_061384.1| post-segregation killing protein [Plasmid F] >r... 43.9 0.010
gb|EGB59887.1| hok/gef family protein [Escherichia coli M863] 43.9 0.010
gb|EFZ69370.1| protein pndA [Escherichia coli 1357] 43.9 0.010
ref|ZP_06014679.1| conserved hypothetical protein [Klebsiella pn... 43.9 0.010
ref|YP_001965411.1| Post-segregational killing toxin [Escherichi... 43.9 0.010
ref|NP_061383.1| modulator of post-segregation killing protein [... 43.9 0.010
ref|ZP_06013867.1| conserved hypothetical protein [Klebsiella pn... 43.9 0.010
ref|ZP_06655660.1| small toxic polypeptide [Escherichia coli B35... 43.5 0.012
ref|NP_053109.1| hypothetical protein pB171_047 [Escherichia col... 43.5 0.012
ref|YP_001711926.1| hypothetical protein pVM01_p077 [Escherichia... 43.5 0.012
ref|YP_001816555.1| SrnB [Escherichia coli 1520] >ref|YP_0039376... 43.5 0.012
ref|YP_001481218.1| hypothetical protein APECO1_O1CoBM63 [Escher... 43.5 0.013
ref|ZP_07125337.1| Hok/gef family protein [Escherichia coli MS 8... 43.5 0.014
ref|YP_002236068.1| protein HokA [Klebsiella pneumoniae 342] >gb... 43.1 0.016
ref|ZP_07248314.1| Hok/gef family protein [Escherichia coli MS 1... 43.1 0.016
ref|ZP_08497500.1| hypothetical protein HMPREF9086_1761 [Enterob... 43.1 0.016
ref|YP_003611380.1| small toxic polypeptide [Enterobacter cloaca... 43.1 0.017
ref|ZP_05966793.2| hypothetical protein ENTCAN_05135 [Enterobact... 43.1 0.018
ref|ZP_03001470.1| protein hokA [Escherichia coli 53638] >gb|EDU... 43.1 0.018
gb|EGL73446.1| protein hok [Cronobacter sakazakii E899] 42.7 0.019
ref|ZP_07102183.1| Hok/gef family protein [Escherichia coli MS 1... 42.7 0.020
ref|YP_003501752.1| small toxic polypeptide [Escherichia coli O5... 42.7 0.021
ref|YP_003232548.1| modulator of post-segregation killing protei... 42.7 0.021
ref|YP_308717.1| post-segregation killing protein [Escherichia c... 42.7 0.021
ref|ZP_02901004.1| protein hokA [Escherichia albertii TW07627] >... 42.7 0.022
gb|EGI90261.1| protein pndA [Shigella boydii 5216-82] 42.7 0.024
ref|ZP_08368990.1| conserved domain protein [Escherichia coli TA... 42.4 0.028
ref|YP_405728.1| small toxic polypeptide [Shigella dysenteriae S... 42.4 0.029
ref|ZP_07192234.1| Hok/gef family protein [Escherichia coli MS 1... 42.0 0.032
ref|ZP_05974139.1| conserved domain protein [Providencia rustigi... 42.0 0.032
ref|ZP_03007093.1| conserved domain protein [Escherichia coli O1... 42.0 0.034
ref|YP_003208406.1| protein hok [Cronobacter turicensis z3032] >... 42.0 0.038
ref|ZP_03047599.1| conserved domain protein [Escherichia coli E2... 42.0 0.040
ref|YP_003212427.1| Stable plasmid inheritance protein [Cronobac... 41.6 0.050
ref|NP_941312.1| small toxic polypeptide [Serratia marcescens] >... 41.2 0.067
emb|CBX72613.1| stable plasmid inheritance protein [Yersinia ent... 40.8 0.070
ref|ZP_06015359.1| conserved hypothetical protein [Klebsiella pn... 40.8 0.083
gb|EGL71915.1| Stable plasmid inheritance protein [Cronobacter s... 40.4 0.099
>dbj|BAI54052.1| conserved hypothetical protein [Escherichia coli SE15]
Length=98
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/50 (100%), Positives = 50/50 (100%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 49 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 98
>ref|YP_001879244.1| Hok/Gef family protein [Shigella boydii CDC 3083-94]
ref|YP_001879246.1| Hok/Gef family protein [Shigella boydii CDC 3083-94]
gb|ACD07300.1| Hok/Gef family protein [Shigella boydii CDC 3083-94]
gb|ACD10364.1| Hok/Gef family protein [Shigella boydii CDC 3083-94]
Length=83
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/50 (100%), Positives = 50/50 (100%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 34 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 83
>ref|YP_001457392.1| Hok/Gef family protein [Escherichia coli HS]
ref|ZP_05437670.1| putative small toxic membrane polypeptide, Putative HokE-like
protein (partial) [Escherichia sp. 4_1_40B]
ref|ZP_07125366.1| Hok/gef family protein [Escherichia coli MS 84-1]
15 more sequence titles
Length=83
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/50 (100%), Positives = 50/50 (100%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 34 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 83
>ref|YP_002328055.1| regulatory protein MokC for HokC 2 [Escherichia coli O127:H6
str. E2348/69]
emb|CAS08030.1| regulatory protein MokC for HokC 2 [Escherichia coli O127:H6
str. E2348/69]
Length=83
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/50 (100%), Positives = 50/50 (100%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 34 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 83
>gb|EGB54535.1| hok/gef family protein [Escherichia coli H489]
Length=73
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/50 (100%), Positives = 50/50 (100%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 24 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 73
>ref|YP_001879242.1| Hok/Gef family protein [Shigella boydii CDC 3083-94]
gb|ACD07431.1| Hok/Gef family protein [Shigella boydii CDC 3083-94]
Length=62
Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/50 (100%), Positives = 50/50 (100%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 13 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 62
>ref|ZP_07146007.1| Hok/gef family protein [Escherichia coli MS 187-1]
gb|EFK25007.1| Hok/gef family protein [Escherichia coli MS 187-1]
Length=85
Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/50 (100%), Positives = 50/50 (100%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 36 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 85
>ref|ZP_07222092.1| Hok/gef family protein [Escherichia coli MS 78-1]
gb|EFK72299.1| Hok/gef family protein [Escherichia coli MS 78-1]
Length=53
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/50 (100%), Positives = 50/50 (100%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 4 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 53
>ref|ZP_07143056.1| Hok/gef family protein [Escherichia coli MS 182-1]
gb|EFK00058.1| Hok/gef family protein [Escherichia coli MS 182-1]
Length=52
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/50 (100%), Positives = 50/50 (100%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 3 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 52
>ref|YP_025295.1| toxic polypeptide, small [Escherichia coli str. K-12 substr.
MG1655]
ref|AP_001227.1| toxic polypeptide, small [Escherichia coli str. K-12 substr.
W3110]
ref|YP_001726015.1| Hok/gef cell toxic protein [Escherichia coli ATCC 8739]
56 more sequence titles
ref|YP_001729481.1| toxic polypeptide, small [Escherichia coli str. K-12 substr.
DH10B]
ref|YP_001729582.1| toxic polypeptide, small [Escherichia coli str. K-12 substr.
DH10B]
ref|ZP_03002081.1| Hok/gef family protein [Escherichia coli 53638]
ref|ZP_03069625.1| Hok/Gef family protein [Escherichia coli 101-1]
ref|YP_002328056.1| small toxic membrane peptide HokC 2 [Escherichia coli O127:H6
str. E2348/69]
ref|YP_002925655.1| toxic polypeptide, small [Escherichia coli BW2952]
ref|YP_003037268.1| Hok/gef cell toxic protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
ref|YP_003043769.1| toxic polypeptide, small [Escherichia coli B str. REL606]
ref|ZP_05434398.1| regulatory protein MokC for HokC 2 [Shigella sp. D9]
ref|YP_003227723.1| small toxic membrane polypeptide HokE [Escherichia coli O26:H11
str. 11368]
ref|YP_003233132.1| small toxic membrane polypeptide HokE [Escherichia coli O111:H-
str. 11128]
ref|ZP_06652544.1| conserved hypothetical protein [Escherichia coli B354]
ref|ZP_06940246.1| regulatory protein MokC for HokC 2 [Escherichia coli OP50]
ref|ZP_07190924.1| Hok/gef family protein [Escherichia coli MS 196-1]
ref|ZP_07778671.1| hok/gef family protein [Escherichia coli 2362-75]
ref|ZP_07784837.1| hok/gef family protein [Escherichia coli 1827-70]
ref|ZP_08342211.1| conserved domain protein [Escherichia coli H736]
ref|ZP_08394127.1| hok/Gef family protein [Shigella sp. D9]
sp|P77091.2|HOKE_ECOLI RecName: Full=Protein hokE
gb|AAT48125.1| toxic polypeptide, small [Escherichia coli str. K-12 substr.
MG1655]
dbj|BAA35222.2| toxic polypeptide, small [Escherichia coli str. K12 substr. W3110]
gb|ACA78688.1| Hok/gef cell toxic protein [Escherichia coli ATCC 8739]
gb|ACB01703.1| toxic polypeptide, small [Escherichia coli str. K-12 substr.
DH10B]
gb|ACB01804.1| toxic polypeptide, small [Escherichia coli str. K-12 substr.
DH10B]
gb|EDU65113.1| Hok/gef family protein [Escherichia coli 53638]
gb|EDX39687.1| Hok/Gef family protein [Escherichia coli 101-1]
emb|CAS08031.1| small toxic membrane peptide HokC 2 [Escherichia coli O127:H6
str. E2348/69]
gb|ACR65667.1| toxic polypeptide, small [Escherichia coli BW2952]
emb|CAQ31053.1| hokE [Escherichia coli BL21(DE3)]
gb|ACT30083.1| Hok/gef cell toxic protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gb|ACT38233.1| toxic polypeptide, small [Escherichia coli B str. REL606]
gb|ACT42426.1| toxic polypeptide, small [Escherichia coli BL21(DE3)]
dbj|BAI23983.1| small toxic membrane polypeptide HokE [Escherichia coli O26:H11
str. 11368]
dbj|BAI34581.1| small toxic membrane polypeptide HokE [Escherichia coli O111:H-
str. 11128]
gb|EFF14366.1| conserved hypothetical protein [Escherichia coli B354]
gb|EFI87486.1| Hok/gef family protein [Escherichia coli MS 196-1]
emb|CBJ00116.1| putative host cell-killing modulation protein [Escherichia coli
ETEC H10407]
gb|EFQ02443.1| hok/gef family protein [Escherichia coli 1827-70]
gb|EFR18730.1| hok/gef family protein [Escherichia coli 2362-75]
dbj|BAJ42406.1| Hok/Gef family protein [Escherichia coli DH1]
gb|EFU97123.1| hok/gef family protein [Escherichia coli 3431]
gb|EFW51993.1| HokE protein [Shigella dysenteriae CDC 74-1112]
gb|EFW57848.1| HokE protein [Shigella flexneri CDC 796-83]
gb|EFZ39953.1| hok/gef family protein [Escherichia coli EPECa14]
gb|EFZ49827.1| hok/gef family protein [Shigella sonnei 53G]
gb|EFZ56351.1| hok/gef family protein [Escherichia coli LT-68]
gb|EFZ76483.1| hok/gef family protein [Escherichia coli RN587/1]
gb|EGB34692.1| hok/gef family protein [Escherichia coli E1520]
gb|EGB39274.1| hok/gef family protein [Escherichia coli E482]
gb|EGB54525.1| hok/gef family protein [Escherichia coli H489]
gb|EGB67417.1| hok/gef family protein [Escherichia coli TA007]
gb|EGB89407.1| Hok/gef family protein [Escherichia coli MS 117-3]
gb|EGI10094.1| conserved domain protein [Escherichia coli H736]
gb|EGJ03656.1| hok/gef family protein [Shigella boydii 3594-74]
gb|EGJ07412.1| hok/Gef family protein [Shigella sp. D9]
gb|AEE55256.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length=50
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/50 (100%), Positives = 50/50 (100%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
>ref|ZP_08372876.1| conserved domain protein [Escherichia coli TA280]
gb|EGI42428.1| conserved domain protein [Escherichia coli TA280]
Length=83
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/50 (98%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 34 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 83
>ref|YP_001879248.1| Hok/Gef family protein [Shigella boydii CDC 3083-94]
ref|YP_002291922.1| hypothetical protein ECSE_0647 [Escherichia coli SE11]
ref|YP_002386037.1| putative small toxic membrane polypeptide HokE-like protein (partial)
[Escherichia coli IAI1]
19 more sequence titles
Length=83
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/50 (98%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 34 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 83
>ref|NP_836210.1| hypothetical protein S0500 [Shigella flexneri 2a str. 2457T]
gb|AAP16016.1| hypothetical protein S0500 [Shigella flexneri 2a str. 2457T]
gb|ADA72869.1| hypothetical protein SFxv_0545 [Shigella flexneri 2002017]
Length=83
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/50 (98%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 34 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 83
>ref|YP_002383633.1| small toxic membrane polypeptide, HokE-like protein (partial)
[Escherichia fergusonii ATCC 35469]
emb|CAQ90021.1| putative small toxic membrane polypeptide, Putative HokE-like
protein (partial) [Escherichia fergusonii ATCC 35469]
Length=83
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/50 (98%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 34 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 83
>ref|NP_286308.1| hypothetical protein Z0722 [Escherichia coli O157:H7 EDL933]
ref|NP_308648.1| hypothetical protein ECs0621 [Escherichia coli O157:H7 str. Sakai]
ref|ZP_03081511.1| hypothetical protein EscherichcoliO157_06641 [Escherichia coli
O157:H7 str. EC4024]
14 more sequence titles
Length=83
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/50 (98%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 34 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 83
>ref|ZP_07154320.1| Hok/gef family protein [Escherichia coli MS 21-1]
gb|EFK18986.1| Hok/gef family protein [Escherichia coli MS 21-1]
gb|ADR25955.1| putative small toxic membrane polypeptide, Putative HokE-like
protein [Escherichia coli O83:H1 str. NRG 857C]
Length=83
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/50 (98%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 34 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 83
>ref|YP_002291921.1| hypothetical protein ECSE_0646 [Escherichia coli SE11]
ref|ZP_06661128.1| hokE [Escherichia coli B088]
ref|ZP_08376947.1| conserved domain protein [Escherichia coli H591]
dbj|BAG76170.1| conserved hypothetical protein [Escherichia coli SE11]
gb|EFE64636.1| hokE [Escherichia coli B088]
gb|EGI47575.1| conserved domain protein [Escherichia coli H591]
Length=62
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/50 (98%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFK VLAYEPKK
Sbjct 13 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKVVLAYEPKK 62
>ref|YP_668540.1| hypothetical protein ECP_0613 [Escherichia coli 536]
ref|YP_002411434.1| toxic polypeptide, small [Escherichia coli UMN026]
ref|ZP_06989227.1| hokE [Escherichia coli FVEC1302]
9 more sequence titles
Length=62
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/50 (98%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 13 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 62
>ref|ZP_03031064.1| Hok/Gef family protein [Escherichia coli B7A]
ref|ZP_03044425.1| Hok/Gef family protein [Escherichia coli E22]
ref|ZP_03050020.1| Hok/Gef family protein [Escherichia coli E110019]
24 more sequence titles
Length=50
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/50 (98%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFK VLAYEPKK
Sbjct 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKVVLAYEPKK 50
>ref|ZP_02804074.1| Hok/Gef family protein [Escherichia coli O157:H7 str. EC4076]
ref|ZP_02811431.1| Hok/Gef family protein [Escherichia coli O157:H7 str. EC869]
ref|YP_001742698.1| Hok/Gef family protein [Escherichia coli SMS-3-5]
139 more sequence titles
Length=50
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/50 (98%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 1 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
>ref|ZP_08352607.1| conserved domain protein [Escherichia coli M718]
gb|EGI21924.1| conserved domain protein [Escherichia coli M718]
Length=62
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/50 (96%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKERNIEF+AVLAYEPKK
Sbjct 13 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFRAVLAYEPKK 62
>gb|EFX27672.1| Hok/Gef family protein [Escherichia coli O55:H7 str. USDA 5905]
Length=98
Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/50 (96%), Positives = 48/50 (96%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTV GFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 49 MLTKYALVAVIVLCLTVPGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 98
>gb|EGB62945.1| hok/gef family protein [Escherichia coli M863]
gb|EGB71525.1| hok/gef family protein [Escherichia coli TW10509]
gb|EGB71526.1| hok/gef family protein [Escherichia coli TW10509]
gb|EGC08683.1| hok/gef family protein [Escherichia fergusonii B253]
gb|EGE65885.1| hok/gef family protein [Escherichia coli STEC_7v]
gb|EGK29432.1| hok/gef family protein [Shigella flexneri K-272]
gb|EGK40090.1| hok/gef family protein [Shigella flexneri K-227]
Length=50
Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/50 (96%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKERNIEF+AVLAYEPKK
Sbjct 1 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFRAVLAYEPKK 50
>gb|EFX22405.1| Hok/Gef family protein [Escherichia coli O55:H7 str. 3256-97
TW 07815]
Length=83
Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/50 (96%), Positives = 48/50 (96%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTV GFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 34 MLTKYALVAVIVLCLTVPGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 83
>ref|ZP_08362868.1| conserved domain protein [Escherichia coli TA143]
gb|EGI32331.1| conserved domain protein [Escherichia coli TA143]
Length=50
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/50 (98%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYALAAVIVLCLTVLGFTLLVG SLCEFTVKERNIEFKAVLAYEPKK
Sbjct 1 MLTKYALAAVIVLCLTVLGFTLLVGGSLCEFTVKERNIEFKAVLAYEPKK 50
>gb|EGB62943.1| hok/gef family protein [Escherichia coli M863]
gb|EGE65882.1| hok/gef family protein [Escherichia coli STEC_7v]
Length=50
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/50 (96%), Positives = 49/50 (98%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFT+LVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 1 MLTKYALVAVIVLCLTVLGFTVLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
>ref|NP_286307.1| hypothetical protein Z0721 [Escherichia coli O157:H7 EDL933]
ref|ZP_03081510.1| hypothetical protein EscherichcoliO157_06636 [Escherichia coli
O157:H7 str. EC4024]
ref|YP_003076584.1| hypothetical protein ECSP_0634 [Escherichia coli O157:H7 str.
TW14359]
13 more sequence titles
Length=98
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/50 (94%), Positives = 48/50 (96%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTV GFTLLVGDSLCEFTVKERNIEF+AVLAYEPKK
Sbjct 49 MLTKYALVAVIVLCLTVPGFTLLVGDSLCEFTVKERNIEFRAVLAYEPKK 98
>ref|ZP_07680615.1| hok/gef family protein [Shigella dysenteriae 1617]
gb|EFP71575.1| hok/gef family protein [Shigella dysenteriae 1617]
Length=50
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/50 (96%), Positives = 48/50 (96%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVL YEPKK
Sbjct 1 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLTYEPKK 50
>gb|EFZ44749.1| hok/gef family protein [Escherichia coli E128010]
Length=54
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/49 (97%), Positives = 48/49 (97%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFK VLAYEPKK
Sbjct 6 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKVVLAYEPKK 54
>gb|EFU50703.1| Hok/gef family protein [Escherichia coli MS 153-1]
Length=50
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/50 (96%), Positives = 48/50 (96%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDS CEFTVKERNIEFKAVLAYEPKK
Sbjct 1 MLTKYALVAVIVLCLTVLGFTLLVGDSRCEFTVKERNIEFKAVLAYEPKK 50
>ref|NP_836209.1| hypothetical protein S0499 [Shigella flexneri 2a str. 2457T]
sp|Q7UDG0.1|HOKF_SHIFL RecName: Full=Putative protein hokF
gb|AAP16015.1| hypothetical protein S0499 [Shigella flexneri 2a str. 2457T]
6 more sequence titles
Length=50
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/50 (94%), Positives = 48/50 (96%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLL GDSLCEFTVKERNIEF+AVLAYEPKK
Sbjct 1 MLTKYALVAVIVLCLTVLGFTLLAGDSLCEFTVKERNIEFRAVLAYEPKK 50
>gb|EFX27568.1| Hok/Gef family protein [Escherichia coli O55:H7 str. USDA 5905]
Length=50
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/50 (96%), Positives = 48/50 (96%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTV GFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 1 MLTKYALVAVIVLCLTVPGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
>ref|ZP_07188882.1| Hok/gef family protein [Escherichia coli MS 69-1]
ref|ZP_08372877.1| conserved domain protein [Escherichia coli TA280]
gb|EFJ79651.1| Hok/gef family protein [Escherichia coli MS 69-1]
gb|EGI42429.1| conserved domain protein [Escherichia coli TA280]
Length=62
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/50 (96%), Positives = 48/50 (96%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLV DSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 13 MLTKYALVAVIVLCLTVLGFTLLVRDSLCEFTVKERNIEFKAVLAYEPKK 62
>gb|EGB62944.1| hok/gef family protein [Escherichia coli M863]
gb|EGE65883.1| hok/gef family protein [Escherichia coli STEC_7v]
Length=50
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/50 (94%), Positives = 48/50 (96%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKE NIEF+AVLAYEPKK
Sbjct 1 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKEHNIEFRAVLAYEPKK 50
>ref|ZP_06652546.1| conserved hypothetical protein [Escherichia coli B354]
gb|EFF14368.1| conserved hypothetical protein [Escherichia coli B354]
Length=50
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/50 (96%), Positives = 48/50 (96%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTVLGFTLLV DSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 1 MLTKYALVAVIVLCLTVLGFTLLVRDSLCEFTVKERNIEFKAVLAYEPKK 50
>ref|ZP_02902179.1| Hok/Gef family protein [Escherichia albertii TW07627]
gb|EDS92145.1| Hok/Gef family protein [Escherichia albertii TW07627]
Length=50
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/50 (94%), Positives = 47/50 (94%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVI LCLTVLGFT LVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 1 MLTKYALVAVIALCLTVLGFTFLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
>ref|NP_308647.1| hypothetical protein ECs0620 [Escherichia coli O157:H7 str. Sakai]
ref|ZP_03440574.1| Hok/Gef family protein [Escherichia coli O157:H7 str. TW14588]
ref|ZP_05938329.1| hypothetical protein EscherichiacoliO157_05514 [Escherichia coli
O157:H7 str. FRIK2000]
7 more sequence titles
Length=50
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/50 (94%), Positives = 48/50 (96%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTV GFTLLVGDSLCEFTVKERNIEF+AVLAYEPKK
Sbjct 1 MLTKYALVAVIVLCLTVPGFTLLVGDSLCEFTVKERNIEFRAVLAYEPKK 50
>gb|EFX31969.1| Hok/Gef family protein [Escherichia coli O157:H7 str. LSU-61]
Length=98
Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/50 (92%), Positives = 47/50 (94%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL AVIVLCLTV GFTLLVGDSLCEFTVKERNIEF+AVLAY PKK
Sbjct 49 MLTKYALVAVIVLCLTVPGFTLLVGDSLCEFTVKERNIEFRAVLAYGPKK 98
>ref|YP_003364210.1| host cell-killing modulation protein [Citrobacter rodentium ICC168]
emb|CBG87357.1| putative host cell-killing modulation protein [Citrobacter rodentium
ICC168]
Length=50
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 48/50 (96%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL A+IVLC+TVLGFTLLVGDSLCEF+VKER +EFKAVLAYEPKK
Sbjct 1 MLTKYALMAIIVLCVTVLGFTLLVGDSLCEFSVKERGMEFKAVLAYEPKK 50
>ref|YP_001336726.1| small toxic membrane polypeptide [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
ref|ZP_06550437.1| hokE [Klebsiella sp. 1_1_55]
gb|ABR78496.1| small toxic membrane polypeptide [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gb|EFD84060.1| hokE [Klebsiella sp. 1_1_55]
Length=67
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 45/50 (90%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL A+IVLC+TVLGFTLLV SLCE ++KERNIEFKAVLAYE KK
Sbjct 18 MLTKYALVAIIVLCITVLGFTLLVHSSLCELSIKERNIEFKAVLAYESKK 67
>ref|YP_002236897.1| Hok/Gef family protein [Klebsiella pneumoniae 342]
ref|YP_003437910.1| Hok/gef cell toxic protein [Klebsiella variicola At-22]
gb|ACI09617.1| Hok/Gef family protein [Klebsiella pneumoniae 342]
gb|ADC56898.1| Hok/gef cell toxic protein [Klebsiella variicola At-22]
Length=50
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 45/50 (90%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL A+IVLC+TVLGFTLLV SLCE ++KERNIEFKAVLAYE KK
Sbjct 1 MLTKYALVAIIVLCITVLGFTLLVHSSLCELSIKERNIEFKAVLAYESKK 50
>ref|YP_003500907.1| Small toxic membrane polypeptide [Escherichia coli O55:H7 str.
CB9615]
gb|ADD57923.1| Small toxic membrane polypeptide [Escherichia coli O55:H7 str.
CB9615]
Length=95
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 45/50 (90%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL A+IVLC TVLGFTL+VGDSLCE +++ER +EFKAVLAYE KK
Sbjct 46 MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK 95
>ref|YP_001881499.1| hok/gef family protein [Shigella boydii CDC 3083-94]
ref|ZP_03028649.1| conserved domain protein [Escherichia coli B7A]
ref|ZP_03071071.1| conserved domain protein [Escherichia coli 101-1]
29 more sequence titles
Length=50
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 45/50 (90%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL A+IVLC TVLGFTL+VGDSLCE +++ER +EFKAVLAYE KK
Sbjct 1 MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK 50
>ref|YP_002920949.1| small toxic membrane polypeptide [Klebsiella pneumoniae NTUH-K2044]
dbj|BAH64882.1| small toxic membrane polypeptide [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length=67
Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 45/50 (90%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL A+IVLC+TVLGFTLLV SLC+ ++KERNIEFKAVLAYE KK
Sbjct 18 MLTKYALVAIIVLCITVLGFTLLVHSSLCKLSIKERNIEFKAVLAYESKK 67
>ref|ZP_07115210.1| Hok/gef family protein [Escherichia coli MS 198-1]
gb|EFJ75312.1| Hok/gef family protein [Escherichia coli MS 198-1]
Length=73
Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 45/50 (90%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL A+IVLC TVLGFTL+VGDSLCE +++ER +EFKAVLAYE KK
Sbjct 24 MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK 73
>ref|NP_289311.1| hypothetical protein Z4071 [Escherichia coli O157:H7 EDL933]
ref|NP_311643.1| hypothetical protein ECs3616 [Escherichia coli O157:H7 str. Sakai]
ref|YP_542108.1| hypothetical protein UTI89_C3125 [Escherichia coli UTI89]
116 more sequence titles
Length=50
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 45/50 (90%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYAL A+IVLC TVLGFTL+VGDSLCE +++ER +EFKAVLAYE KK
Sbjct 1 MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK 50
>ref|YP_003940501.1| Hok/gef cell toxic protein [Enterobacter cloacae SCF1]
gb|ADO47217.1| Hok/gef cell toxic protein [Enterobacter cloacae SCF1]
Length=50
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
MLTKYA+ A+I LC+T LGFTL+V DSLCE +++ER +EFKAVLAYEPKK
Sbjct 1 MLTKYAVVAIIALCITALGFTLMVRDSLCELSIRERGMEFKAVLAYEPKK 50
>gb|EFZ49828.1| hok/gef family protein [Shigella sonnei 53G]
gb|EFZ65506.1| hok/gef family protein [Escherichia coli 1180]
Length=39
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/39 (97%), Positives = 39/39 (100%), Gaps = 0/39 (0%)
Query 12 VLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+LCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sbjct 1 MLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 39
>ref|ZP_08306187.1| Hok/gef family protein [Klebsiella sp. MS 92-3]
gb|EGF61697.1| Hok/gef family protein [Klebsiella sp. MS 92-3]
Length=43
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 38/42 (90%), Gaps = 0/42 (0%)
Query 9 AVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
A+IVLC+TVLGFTLLV SLCE ++KERNIEFKAVLAYE KK
Sbjct 2 AIIVLCITVLGFTLLVHSSLCELSIKERNIEFKAVLAYESKK 43
>ref|ZP_07222091.1| Hok/gef family protein [Escherichia coli MS 78-1]
gb|EFK72329.1| Hok/gef family protein [Escherichia coli MS 78-1]
Length=69
Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/36 (97%), Positives = 35/36 (97%), Gaps = 0/36 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKER 36
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKER
Sbjct 34 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKER 69
>ref|ZP_07143057.1| Hok/gef family protein [Escherichia coli MS 182-1]
gb|EFK00021.1| Hok/gef family protein [Escherichia coli MS 182-1]
Length=48
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/36 (97%), Positives = 35/36 (97%), Gaps = 0/36 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKER 36
MLTKYAL AVIVLCLTVLGFTLLVGDSLCEFTVKER
Sbjct 13 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKER 48
>ref|ZP_02900778.1| conserved domain protein [Escherichia albertii TW07627]
gb|EDS94044.1| conserved domain protein [Escherichia albertii TW07627]
Length=39
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 35/39 (89%), Gaps = 0/39 (0%)
Query 12 VLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+LC TVLGFTL+VGDSLCE +++ER +EFKAVLAYE KK
Sbjct 1 MLCFTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK 39
>ref|YP_001144366.1| hypothetical protein ASA_P5G151 [Aeromonas salmonicida subsp.
salmonicida A449]
gb|ABO92618.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length=50
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M K A+ A++++C+TVL FT LV DSLCE +V++ E +A LAYEP++
Sbjct 1 MPGKTAVMALLIVCVTVLAFTALVRDSLCELSVRQGGTEIRAYLAYEPRE 50
>gb|ADA75900.1| putative membrane permeability altering protein [Shigella flexneri
2002017]
gb|EGJ80419.1| protein pndA [Shigella flexneri K-671]
gb|EGJ80575.1| protein pndA [Shigella flexneri 4343-70]
6 more sequence titles
Length=50
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LAY+ K+
Sbjct 1 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLAYKLKE 50
>ref|YP_001812480.1| post-segregation killing protein [Proteus mirabilis]
emb|CAQ34877.1| post-segregation killing protein [Proteus mirabilis HI4320]
Length=48
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 0/48 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPK 49
+TKYAL +I +CLTVL F+LL+ D LC +V N +A L+YE +
Sbjct 1 MTKYALIGLIAVCLTVLCFSLLMRDRLCSISVNSGNTVVQATLSYEER 48
>ref|ZP_08350474.1| conserved domain protein [Escherichia coli M605]
dbj|BAI56932.1| conserved hypothetical protein [Escherichia coli SE15]
gb|EGB61468.1| hok/gef family protein [Escherichia coli M863]
gb|EGC05876.1| hok/gef family protein [Escherichia fergusonii B253]
gb|EGE62901.1| protein pndA [Escherichia coli STEC_7v]
gb|EGH38134.1| putative membrane permeability altering protein [Escherichia
coli AA86]
gb|EGI14030.1| conserved domain protein [Escherichia coli M605]
gb|AEG38548.1| Toxic polypeptide, samll [Escherichia coli NA114]
Length=50
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ N E A LA
Sbjct 1 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQENYELAAFLA 45
>ref|YP_003367662.1| small toxic membrane protein HokA [Citrobacter rodentium ICC168]
emb|CBG90945.1| small toxic membrane protein HokA [Citrobacter rodentium ICC168]
Length=50
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M K L ++IV+CLT+L FT +V DSLCE +++ N E A LA E K+
Sbjct 1 MPQKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACEVKQ 50
>ref|ZP_07143768.1| Hok/gef family protein [Escherichia coli MS 187-1]
gb|EFK27267.1| Hok/gef family protein [Escherichia coli MS 187-1]
Length=72
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 23 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLA 67
>ref|ZP_07164784.1| Hok/gef family protein [Escherichia coli MS 116-1]
ref|ZP_07167458.1| Hok/gef family protein [Escherichia coli MS 175-1]
gb|EFJ67804.1| Hok/gef family protein [Escherichia coli MS 175-1]
gb|EFK13428.1| Hok/gef family protein [Escherichia coli MS 116-1]
Length=70
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 21 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLA 65
>ref|ZP_08303544.1| Hok/gef family protein [Klebsiella sp. MS 92-3]
gb|EGF64337.1| Hok/gef family protein [Klebsiella sp. MS 92-3]
Length=50
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M KY L ++V+C T+L T +V DSLCE +++ NIE A LA + K+
Sbjct 1 MPQKYLLFGLVVICFTILLLTWMVRDSLCELQIRQGNIELVAFLACDIKQ 50
>ref|ZP_07136872.1| Hok/gef family protein [Escherichia coli MS 115-1]
gb|EFJ95881.1| Hok/gef family protein [Escherichia coli MS 115-1]
Length=70
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 21 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLA 65
>ref|YP_543057.1| small toxic polypeptide [Escherichia coli UTI89]
ref|YP_671535.1| small toxic polypeptide [Escherichia coli 536]
ref|ZP_04533809.1| small toxic polypeptide [Escherichia sp. 3_2_53FAA]
8 more sequence titles
Length=70
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 21 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLA 65
>ref|YP_026229.1| toxic polypeptide, small [Escherichia coli str. K-12 substr.
MG1655]
ref|AP_004237.1| toxic polypeptide, small [Escherichia coli str. K-12 substr.
W3110]
ref|YP_001460350.1| small toxic polypeptide [Escherichia coli HS]
71 more sequence titles
Length=50
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 1 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLA 45
>ref|YP_312608.1| small toxic polypeptide [Shigella sonnei Ss046]
gb|AAZ90373.1| Putative membrane permeability altering protein [Shigella sonnei
Ss046]
Length=50
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 1 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLA 45
>ref|ZP_06551228.1| small toxic polypeptide [Klebsiella sp. 1_1_55]
gb|EFD83650.1| small toxic polypeptide [Klebsiella sp. 1_1_55]
Length=70
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M KY L ++V+C T+L T +V DSLCE +++ NIE A LA + K+
Sbjct 21 MPQKYLLFGLVVICFTILLLTWMVRDSLCELQLRQGNIELVAFLACDIKQ 70
>ref|YP_003437125.1| Hok/gef cell toxic protein [Klebsiella variicola At-22]
gb|ADC56113.1| Hok/gef cell toxic protein [Klebsiella variicola At-22]
Length=50
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M KY L ++V+C T+L T +V DSLCE +++ NIE A LA + K+
Sbjct 1 MPQKYLLFGLVVICFTILLLTWMVRDSLCELQLRQGNIELVAFLACDIKQ 50
>ref|YP_001144316.1| SrnB protein [Aeromonas salmonicida subsp. salmonicida A449]
gb|ABO92568.1| SrnB protein [Aeromonas salmonicida subsp. salmonicida A449]
Length=120
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M K A+ +++++C+T LG LV DSLCE V + E + LAYE K+
Sbjct 71 MFGKTAVVSLLIVCITALGVISLVRDSLCELEVHQGETEIRLNLAYEAKR 120
>ref|YP_409869.1| small toxic polypeptide [Shigella boydii Sb227]
ref|YP_001882250.1| small toxic polypeptide [Shigella boydii CDC 3083-94]
gb|ABB68041.1| Putative membrane permeability altering protein [Shigella boydii
Sb227]
gb|ACD07595.1| protein hokA [Shigella boydii CDC 3083-94]
gb|EFW52206.1| putative membrane permeability altering protein [Shigella dysenteriae
CDC 74-1112]
gb|EFW61786.1| putative membrane permeability altering protein [Shigella flexneri
CDC 796-83]
gb|EGI94519.1| protein pndA [Shigella boydii 3594-74]
Length=50
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT +V DSLCE +K+ E A LA
Sbjct 1 MPQKYGLLSLIVICFTLLFFTWMVRDSLCELHIKQGRYELAAFLA 45
>ref|ZP_07593915.1| Hok/gef cell toxic protein [Escherichia coli W]
gb|EFN36543.1| Hok/gef cell toxic protein [Escherichia coli W]
gb|ADX48835.1| Hok/gef cell toxic protein [Escherichia coli KO11]
Length=98
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 21 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYELAAFLA 65
>ref|ZP_08394538.1| small toxic polypeptide [Shigella sp. D9]
gb|ADT77169.1| toxic polypeptide, small [Escherichia coli W]
gb|EGJ07823.1| small toxic polypeptide [Shigella sp. D9]
Length=78
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 1 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYELAAFLA 45
>ref|ZP_08385806.1| conserved domain protein [Escherichia coli H299]
gb|EGI48803.1| conserved domain protein [Escherichia coli H299]
Length=50
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT +V DSLCE +K+ + E A LA
Sbjct 1 MPQKYRLLSLIVICFTLLFFTWMVRDSLCELHIKQGSYELAAFLA 45
>gb|EFZ68115.1| protein pndA [Escherichia coli 1357]
Length=70
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 21 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYELAAFLA 65
>ref|NP_290142.1| small toxic polypeptide [Escherichia coli O157:H7 EDL933]
ref|ZP_03080470.1| small toxic polypeptide [Escherichia coli O157:H7 str. EC4024]
ref|ZP_05939157.1| small toxic polypeptide [Escherichia coli O157:H7 str. FRIK2000]
8 more sequence titles
ref|ZP_05946758.1| small toxic polypeptide [Escherichia coli O157:H7 str. FRIK966]
gb|AAG58706.1|AE005582_9 putative membrane permeability altering protein [Escherichia
coli O157:H7 str. EDL933]
gb|EFX09472.1| small toxic polypeptide [Escherichia coli O157:H7 str. G5101]
gb|EFX14065.1| small toxic polypeptide [Escherichia coli O157:H- str. 493-89]
gb|EFX18791.1| small toxic polypeptide [Escherichia coli O157:H- str. H 2687]
gb|EFX23806.1| small toxic polypeptide [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gb|EFX29078.1| small toxic polypeptide [Escherichia coli O55:H7 str. USDA 5905]
gb|EFX33670.1| small toxic polypeptide [Escherichia coli O157:H7 str. LSU-61]
Length=70
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 21 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYELAAFLA 65
>ref|ZP_04872797.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gb|EEH71270.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
Length=64
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 15 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYELAAFLA 59
>ref|ZP_07172293.1| Hok/gef family protein [Escherichia coli MS 200-1]
ref|YP_004119705.1| PndA [Escherichia coli]
gb|ADJ38422.1| PndA [Escherichia coli]
gb|EFJ63565.1| Hok/gef family protein [Escherichia coli MS 200-1]
gb|EGB79999.1| Hok/gef family protein [Escherichia coli MS 60-1]
Length=50
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M + L +IV+C+T+L F +V DSLC F +++ N F A LAYE K+
Sbjct 1 MPQRTFLMMLIVVCVTILCFVWMVRDSLCGFRIEQGNTVFVATLAYEVKR 50
>ref|YP_001745843.1| small toxic polypeptide [Escherichia coli SMS-3-5]
ref|ZP_07152016.1| Hok/gef family protein [Escherichia coli MS 21-1]
gb|ACB19105.1| protein hokA [Escherichia coli SMS-3-5]
gb|EFK21242.1| Hok/gef family protein [Escherichia coli MS 21-1]
Length=50
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 1 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYELAAFLA 45
>ref|YP_001465033.1| small toxic polypeptide [Escherichia coli E24377A]
ref|ZP_02797488.2| protein hokA [Escherichia coli O157:H7 str. EC4196]
ref|ZP_02771919.2| protein hokA [Escherichia coli O157:H7 str. EC4113]
64 more sequence titles
Length=50
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 1 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYELAAFLA 45
>ref|ZP_04621153.1| hypothetical protein yaldo0001_36870 [Yersinia aldovae ATCC 35236]
gb|EEP94319.1| hypothetical protein yaldo0001_36870 [Yersinia aldovae ATCC 35236]
Length=50
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M K + ++++C+TVL FTL+ SLCE +K+ N E A+LAYE ++
Sbjct 1 MPQKTFVLCLLIVCITVLAFTLITHKSLCELRLKDGNKEVAAILAYESER 50
>ref|YP_002295106.1| small toxic polypeptide [Escherichia coli SE11]
dbj|BAG79355.1| conserved hypothetical protein [Escherichia coli SE11]
Length=70
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 21 MPQKYRLLSLIVICYTLLFFTWMIRDSLCELHIKQGSYELAAFLA 65
>ref|YP_001337574.1| small toxic polypeptide [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
ref|YP_002921767.1| small toxic polypeptide [Klebsiella pneumoniae NTUH-K2044]
gb|ABR79307.1| putative hok/gef cell toxic protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
dbj|BAH65700.1| putative hok/gef cell toxic protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length=70
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M KY L ++V+C T+L T +V DSLCE ++ NIE A LA + K+
Sbjct 21 MPQKYLLFGLVVICFTILLLTWMVRDSLCELQRRQGNIELVAFLACDIKQ 70
>ref|ZP_04627665.1| hypothetical protein yberc0001_14270 [Yersinia bercovieri ATCC
43970]
gb|EEQ07513.1| hypothetical protein yberc0001_14270 [Yersinia bercovieri ATCC
43970]
Length=50
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 0/41 (0%)
Query 10 VIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
++++C+TVL FTL+ SLCE +K+ N E A+LAYE ++
Sbjct 10 LLIVCITVLAFTLITHKSLCELRLKDGNKEVAAILAYESER 50
>ref|ZP_06658909.1| srnB protein [Escherichia coli B185]
gb|EFF04609.1| srnB protein [Escherichia coli B185]
Length=69
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL ++ +C TVL F+L+ + LCE + N + LAYE +K
Sbjct 21 MTKYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 69
>ref|ZP_03049409.1| protein hokA [Escherichia coli E110019]
ref|ZP_07141499.1| Hok/gef family protein [Escherichia coli MS 182-1]
ref|ZP_07221427.1| Hok/gef family protein [Escherichia coli MS 78-1]
gb|EDV88539.1| protein hokA [Escherichia coli E110019]
gb|EFK01584.1| Hok/gef family protein [Escherichia coli MS 182-1]
gb|EFK72978.1| Hok/gef family protein [Escherichia coli MS 78-1]
gb|EGB90347.1| Hok/gef family protein [Escherichia coli MS 117-3]
Length=50
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA
Sbjct 1 MPQKYRLLSLIVICYTLLFFTWMIRDSLCELHIKQGSYELAAFLA 45
>ref|ZP_07104706.1| Hok/gef family protein [Escherichia coli MS 119-7]
gb|EFK43991.1| Hok/gef family protein [Escherichia coli MS 119-7]
Length=68
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL ++ +C TVL F+L+ + LCE + N + LAYE +K
Sbjct 20 MTKYALIGLLAVCATVLCFSLMFRERLCELNIHRGNTVVQVTLAYEARK 68
>ref|NP_061384.1| post-segregation killing protein [Plasmid F]
ref|YP_001919356.1| conserved domain protein [Escherichia coli 53638]
ref|ZP_08353564.1| conserved domain protein [Escherichia coli M718]
dbj|BAA97875.1| srnB' [Plasmid F]
gb|ACD54554.1| conserved domain protein [Escherichia coli 53638]
gb|EGI21725.1| conserved domain protein [Escherichia coli M718]
Length=49
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL ++ +C TVL F+L+ + LCE + N + LAYE +K
Sbjct 1 MTKYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 49
>gb|EGB59887.1| hok/gef family protein [Escherichia coli M863]
Length=69
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL ++ +C TVL F+L+ + LCE + N + LAYE +K
Sbjct 21 MTKYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 69
>gb|EFZ69370.1| protein pndA [Escherichia coli 1357]
Length=43
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 0/40 (0%)
Query 11 IVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
IV+C+T+L F +V DSLC F +++ N F A LAYE K+
Sbjct 4 IVVCVTILCFVWMVRDSLCGFRIEQGNTVFVATLAYEVKR 43
>ref|ZP_06014679.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gb|EEW42213.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length=43
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 23/24 (95%), Gaps = 0/24 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLV 24
MLTKYAL A+IVLC+TVLGFTLLV
Sbjct 18 MLTKYALVAIIVLCITVLGFTLLV 41
>ref|YP_001965411.1| Post-segregational killing toxin [Escherichia coli]
ref|ZP_03062864.1| conserved domain protein [Escherichia coli B171]
ref|YP_002332180.1| post-segregational killing toxin [Escherichia coli O127:H6 str.
E2348/69]
gb|ABG29539.1| Post-segregational killing toxin [Escherichia coli]
gb|EDX27907.1| conserved domain protein [Escherichia coli B171]
emb|CAS07473.1| post-segregational killing toxin [Escherichia coli O127:H6 str.
E2348/69]
gb|EFZ45027.1| protein srnB [Escherichia coli E128010]
Length=49
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL V+ +C TVL F L+ + LCE + N + LAYE +K
Sbjct 1 MTKYALIGVLAVCATVLCFLLIFRERLCELNIHRGNTVVQVTLAYEARK 49
>ref|NP_061383.1| modulator of post-segregation killing protein [Plasmid F]
sp|P13970.1|SRNB_ECOLI RecName: Full=Protein SrnB
emb|CAA32614.1| unnamed protein product [Plasmid F]
gb|AAA99006.1| snrB [Escherichia coli]
gb|AAA98078.1| srnB [Plasmid F]
dbj|BAA97874.1| srnB [Plasmid F]
prf||1207222A gene srnB
Length=68
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL ++ +C TVL F+L+ + LCE + N + LAYE +K
Sbjct 20 MTKYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 68
>ref|ZP_06013867.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gb|EEW43026.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length=50
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M KY L ++V+C T+L T +V DSLCE ++ NIE A LA + K+
Sbjct 1 MPQKYLLFGLVVICFTILLLTWMVRDSLCELQRRQGNIELVAFLACDIKQ 50
>ref|ZP_06655660.1| small toxic polypeptide [Escherichia coli B354]
gb|EFF11132.1| small toxic polypeptide [Escherichia coli B354]
gb|EGB70139.1| hok/gef family protein [Escherichia coli TW10509]
Length=50
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A LA K+
Sbjct 1 MPQKYRLLSLIVICCTLLFFTWMIRDSLCELHIKQGSYELAAFLACNLKE 50
>ref|NP_053109.1| hypothetical protein pB171_047 [Escherichia coli]
dbj|BAA84882.1| snrB [Escherichia coli]
Length=68
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL V+ +C TVL F L+ + LCE + N + LAYE +K
Sbjct 20 MTKYALIGVLAVCATVLCFLLIFRERLCELNIHRGNTVVQVTLAYEARK 68
>ref|YP_001711926.1| hypothetical protein pVM01_p077 [Escherichia coli]
gb|ACA34800.1| SrnB [Escherichia coli]
gb|EGC09766.1| hok/gef family protein [Escherichia coli E1167]
Length=68
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL ++ +C TVL F+L+ + LCE + N + LAYE +K
Sbjct 20 MTKYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 68
>ref|YP_001816555.1| SrnB [Escherichia coli 1520]
ref|YP_003937652.1| modulator of post-segregation killing protein SrnB [Escherichia
coli]
emb|CAP07741.1| SrnB [Escherichia coli]
emb|CBX35970.1| modulator of post-segregation killing protein SrnB [Escherichia
coli]
Length=103
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL ++ +C TVL F+L+ + LCE + N + LAYE +K
Sbjct 55 MTKYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 103
>ref|YP_001481218.1| hypothetical protein APECO1_O1CoBM63 [Escherichia coli APEC O1]
ref|YP_002527575.1| post-segregation killing protein SrnB [Escherichia coli]
ref|YP_002539334.1| Hok/Gef family protein [Escherichia coli]
gb|ABD51633.1| SrnB [Escherichia coli APEC O1]
gb|ACJ63604.1| post-segregation killing protein SrnB [Escherichia coli]
gb|ACM18268.1| Hok/Gef family protein [Escherichia coli]
gb|ADR29944.1| post-segregation killing protein SrnB [Escherichia coli O83:H1
str. NRG 857C]
Length=103
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL ++ +C TVL F+L+ + LCE + N + LAYE +K
Sbjct 55 MTKYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 103
>ref|ZP_07125337.1| Hok/gef family protein [Escherichia coli MS 84-1]
ref|ZP_07213106.1| Hok/gef family protein [Escherichia coli MS 124-1]
gb|EFJ84112.1| Hok/gef family protein [Escherichia coli MS 84-1]
gb|EFK65480.1| Hok/gef family protein [Escherichia coli MS 124-1]
gb|EFU32557.1| Hok/gef family protein [Escherichia coli MS 85-1]
gb|EFU55611.1| Hok/gef family protein [Escherichia coli MS 16-3]
Length=97
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL ++ +C TVL F+L+ + LCE + N + LAYE +K
Sbjct 49 MTKYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 97
>ref|YP_002236068.1| protein HokA [Klebsiella pneumoniae 342]
gb|ACI11712.1| protein HokA [Klebsiella pneumoniae 342]
Length=50
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M KY L ++V+C T+L T +V DSLCE +++ +IE A LA + K+
Sbjct 1 MPQKYLLFGLVVICFTILLLTWMVRDSLCELQLRQGDIELVAFLACDIKQ 50
>ref|ZP_07248314.1| Hok/gef family protein [Escherichia coli MS 146-1]
gb|EFK88153.1| Hok/gef family protein [Escherichia coli MS 146-1]
Length=136
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL V+ +C TVL F L+ + LCE + N + LAYE +K
Sbjct 88 MTKYALIGVLAVCATVLCFLLIFRERLCELNIHRGNTVVQVTLAYEARK 136
>ref|ZP_08497500.1| hypothetical protein HMPREF9086_1761 [Enterobacter hormaechei
ATCC 49162]
gb|EGK61816.1| hypothetical protein HMPREF9086_1761 [Enterobacter hormaechei
ATCC 49162]
Length=93
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M + L + ++C T+L FT +V DSLCE ++ E AVLAYE K+
Sbjct 44 MPKRTLLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAKR 93
>ref|YP_003611380.1| small toxic polypeptide [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gb|ADF60431.1| small toxic polypeptide [Enterobacter cloacae subsp. cloacae
ATCC 13047]
emb|CBK87669.1| Hok/gef family [Enterobacter cloacae subsp. cloacae NCTC 9394]
Length=50
Score = 43.1 bits (100), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M + L + ++C T+L FT +V DSLCE ++ E AVLAYE K+
Sbjct 1 MPKRTLLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAKR 50
>ref|ZP_05966793.2| hypothetical protein ENTCAN_05135 [Enterobacter cancerogenus
ATCC 35316]
gb|EFC57700.1| conserved domain protein [Enterobacter cancerogenus ATCC 35316]
Length=93
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M + L + ++C T+L FT +V DSLCE ++ E AVLAYE K+
Sbjct 44 MPKRALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAKR 93
>ref|ZP_03001470.1| protein hokA [Escherichia coli 53638]
gb|EDU64502.1| protein hokA [Escherichia coli 53638]
Length=50
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L T ++ DSLCE +K+ + E A LA
Sbjct 1 MPQKYRLLSLIVICFTLLFLTWMIRDSLCELHIKQESYELAAFLA 45
>gb|EGL73446.1| protein hok [Cronobacter sakazakii E899]
Length=92
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 0/47 (0%)
Query 4 KYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
K+++ I +CLT+L FT L +SLCE +K+ EF A LAYE K
Sbjct 46 KHSVLVRINVCLTLLIFTFLTRNSLCELRLKDGQREFAAFLAYESGK 92
>ref|ZP_07102183.1| Hok/gef family protein [Escherichia coli MS 119-7]
ref|ZP_08371230.1| conserved domain protein [Escherichia coli TA271]
ref|ZP_08380308.1| conserved domain protein [Escherichia coli H591]
gb|EFK46472.1| Hok/gef family protein [Escherichia coli MS 119-7]
gb|EGI34373.1| conserved domain protein [Escherichia coli TA271]
gb|EGI44135.1| conserved domain protein [Escherichia coli H591]
Length=50
Score = 42.7 bits (99), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M KY L ++IV+C T+L FT ++ DSLCE +K+ E A LA K+
Sbjct 1 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGCYELAAFLACNLKE 50
>ref|YP_003501752.1| small toxic polypeptide [Escherichia coli O55:H7 str. CB9615]
gb|ADD58768.1| small toxic polypeptide [Escherichia coli O55:H7 str. CB9615]
Length=70
Score = 42.7 bits (99), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C +L FT ++ DSLCE +K+ + E A LA
Sbjct 21 MPQKYRLLSLIVICFALLFFTWMIRDSLCELHIKQGSYELAAFLA 65
>ref|YP_003232548.1| modulator of post-segregation killing protein SnrB [Escherichia
coli O26:H11 str. 11368]
dbj|BAI28873.1| modulator of post-segregation killing protein SnrB [Escherichia
coli O26:H11 str. 11368]
Length=68
Score = 42.7 bits (99), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL ++ +C TVL F+L+ + LCE + N + LAYE +K
Sbjct 20 MTKYALIGLLAVCATVLCFSLIFRERLCELNIYRGNTVVQVTLAYEARK 68
>ref|YP_308717.1| post-segregation killing protein [Escherichia coli]
gb|AAZ76435.1| Post-segregation killing protein [Escherichia coli]
Length=50
Score = 42.7 bits (99), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M + L +IV+C+T+L F +V DSLC F V++ N A LAYE K+
Sbjct 1 MPQRTFLTMLIVVCVTILCFVWMVRDSLCGFRVEQGNTVLVATLAYEVKR 50
>ref|ZP_02901004.1| protein hokA [Escherichia albertii TW07627]
gb|EDS92920.1| protein hokA [Escherichia albertii TW07627]
Length=50
Score = 42.7 bits (99), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E LA
Sbjct 1 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYELATFLA 45
>gb|EGI90261.1| protein pndA [Shigella boydii 5216-82]
Length=50
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 0/44 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVL 44
M KY L ++IV+C T+L FT ++ DSLCE +K+ + E A L
Sbjct 1 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYELAAFL 44
>ref|ZP_08368990.1| conserved domain protein [Escherichia coli TA271]
gb|EGI36559.1| conserved domain protein [Escherichia coli TA271]
Length=68
Score = 42.4 bits (98), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL ++ +C TVL F L+ + LCE + N + LAYE +K
Sbjct 20 MTKYALIGLLAVCATVLCFLLIFRERLCELNIHRGNTVVQVTLAYEARK 68
>ref|YP_405728.1| small toxic polypeptide [Shigella dysenteriae Sd197]
ref|ZP_07682371.1| protein pndA [Shigella dysenteriae 1617]
gb|ABB64237.1| Putative membrane permeability altering protein [Shigella dysenteriae
Sd197]
gb|EFP70006.1| protein pndA [Shigella dysenteriae 1617]
Length=50
Score = 42.4 bits (98), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 0/45 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
M KY L ++IV+C T+L FT ++ DSLCE +++ E A LA
Sbjct 1 MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIEQGGYELAAFLA 45
>ref|ZP_07192234.1| Hok/gef family protein [Escherichia coli MS 196-1]
ref|ZP_07197903.1| Hok/gef family protein [Escherichia coli MS 185-1]
gb|EFI86172.1| Hok/gef family protein [Escherichia coli MS 196-1]
gb|EFJ53662.1| Hok/gef family protein [Escherichia coli MS 185-1]
Length=49
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKY L ++ +C TVL F+L+ + LCE + N + LAYE +K
Sbjct 1 MTKYTLIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 49
>ref|ZP_05974139.1| conserved domain protein [Providencia rustigianii DSM 4541]
ref|ZP_05974777.1| conserved domain protein [Providencia rustigianii DSM 4541]
gb|EFB70306.1| conserved domain protein [Providencia rustigianii DSM 4541]
gb|EFB71020.1| conserved domain protein [Providencia rustigianii DSM 4541]
Length=47
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 0/44 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45
+TK+ L +I +C+TVLG +LL+ D LC F+V N +A L+
Sbjct 1 MTKFTLMGLIAVCITVLGLSLLMRDRLCSFSVISGNTAVQATLS 44
>ref|ZP_03007093.1| conserved domain protein [Escherichia coli O157:H7 str. EC4486]
ref|ZP_07155354.1| Hok/gef family protein [Escherichia coli MS 21-1]
ref|ZP_07193037.1| Hok/gef family protein [Escherichia coli MS 196-1]
sp|P11902.1|PNDA1_ECOLX RecName: Full=Protein pndA
emb|CAA31320.1| unnamed protein product [Escherichia coli]
gb|EDU78974.1| conserved domain protein [Escherichia coli O157:H7 str. EC4486]
gb|EFI85368.1| Hok/gef family protein [Escherichia coli MS 196-1]
gb|EFK17914.1| Hok/gef family protein [Escherichia coli MS 21-1]
Length=50
Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 0/50 (0%)
Query 1 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
M + L +IV+C+T+L F +V DSLC F +++ N A LAYE K+
Sbjct 1 MPQRTFLMMLIVVCVTILCFVWMVRDSLCGFRIEQGNTVLVATLAYEVKR 50
>ref|YP_003208406.1| protein hok [Cronobacter turicensis z3032]
emb|CBA26678.1| Protein hok [Cronobacter turicensis z3032]
Length=52
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 0/41 (0%)
Query 10 VIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
V+++C+T+L FT L SLCE +K+ EF A LAYE K
Sbjct 12 VLMICITLLMFTFLTRHSLCELRLKDGQREFAAFLAYESGK 52
>ref|ZP_03047599.1| conserved domain protein [Escherichia coli E22]
gb|EDV80459.1| conserved domain protein [Escherichia coli E22]
Length=49
Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 0/49 (0%)
Query 2 LTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
+TKYAL ++ +C VL F+L+ + LCE + N + LAYE +K
Sbjct 1 MTKYALIGLLAVCAMVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 49
>ref|YP_003212427.1| Stable plasmid inheritance protein [Cronobacter turicensis z3032]
emb|CBA34388.1| Stable plasmid inheritance protein [Cronobacter turicensis z3032]
Length=52
Score = 41.6 bits (96), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 0/41 (0%)
Query 10 VIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
V+++C+T+L FTLL+ SLCE K+R E A LAYE K
Sbjct 12 VLIVCITLLIFTLLIRKSLCEIRYKDRYREAAAFLAYESGK 52
>ref|NP_941312.1| small toxic polypeptide [Serratia marcescens]
ref|YP_002791485.1| hypothetical protein pEC-IMP_223 [Enterobacter cloacae]
ref|YP_002791798.1| hypothetical protein pEC-IMPQ_230 [Enterobacter cloacae]
emb|CAE51768.1| plasmid inheritance protein [Serratia marcescens]
gb|ACO54109.1| hypothetical protein [Enterobacter cloacae]
gb|ACO54422.1| hypothetical protein [Enterobacter cloacae]
Length=52
Score = 41.2 bits (95), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 0/41 (0%)
Query 10 VIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
++++CLT+L FT L +SLCE +K+ E A+LAYE K
Sbjct 12 ILIVCLTLLIFTWLTRNSLCELRMKDGTREVSAILAYESGK 52
>emb|CBX72613.1| stable plasmid inheritance protein [Yersinia enterocolitica W22703]
Length=50
Score = 40.8 bits (94), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 0/41 (0%)
Query 10 VIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
++++C+TVL FTL+ SLCE VK E A+LAYE ++
Sbjct 10 LLIVCITVLAFTLITHKSLCELRVKNGIKEVAAILAYESER 50
>ref|ZP_06015359.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gb|EEW41606.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length=61
Score = 40.8 bits (94), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 0/44 (0%)
Query 7 LAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
L V+++CLT+L FT L SLCE ++ N E A LAYE K
Sbjct 18 LGCVLIVCLTLLIFTYLTRKSLCEIRYRDTNREVAAFLAYESAK 61
>gb|EGL71915.1| Stable plasmid inheritance protein [Cronobacter sakazakii E899]
Length=52
Score = 40.4 bits (93), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 0/41 (0%)
Query 10 VIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50
V+++C T+L FTLL+ SLCE K+R E A LAYE K
Sbjct 12 VLIVCTTLLIFTLLIRKSLCEIRYKDRYREAAAFLAYESGK 52
Lambda K H
0.328 0.141 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 153771579981
Database: nr_env
Posted date: Feb 1, 2012 7:14 AM
Number of letters in database: 6,167,035,527
Number of sequences in database: 20,512,688
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40