BLAST Search Results

Blast performed on February-4-2012 BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: nr_env 20,512,688 sequences; 6,167,035,527 total letters Query= EG13116 casD Length=224 Score E Sequences producing significant alignments: (Bits) Value ref|ZP_07164393.1| CRISPR-associated protein Cas5 [Escherichia c... 463 1e-128 ref|AP_003324.1| hypothetical protein [Escherichia coli str. K-1... 462 1e-128 ref|YP_001459524.1| CRISPR-associated Cas5 family Ecoli subtype ... 430 6e-119 ref|YP_001723951.1| CRISPR-associated Cas5 family protein [Esche... 425 2e-117 ref|YP_002381514.1| hypothetical protein EFER_0306 [Escherichia ... 421 4e-116 gb|EGB32076.1| CRISPR-associated protein cas5 [Escherichia coli ... 402 3e-110 gb|EGB37594.1| CRISPR protein cas5 [Escherichia coli E482] 335 2e-90 gb|AEE57978.1| CRISPR-associated protein [Escherichia coli UMNK88] 330 8e-89 gb|EGE63174.1| CRISPR-associated protein family protein [Escheri... 323 2e-86 ref|YP_002647840.1| CRISPR-associated Cas5 family protein [Erwin... 222 3e-56 gb|ADP09967.1| CRISPR-associated Cas5 family protein [Erwinia sp... 218 4e-55 ref|NP_952441.1| CRISPR-associated Cas5e family protein [Geobact... 218 4e-55 emb|CBX81699.1| CRISPR-associated protein Cas5, Ecoli subtype [E... 215 4e-54 ref|YP_003532171.1| CRISPR-associated protein Cas5 [Erwinia amyl... 214 1e-53 ref|ZP_01313568.1| CRISPR-associated protein, CT1976 [Desulfurom... 204 9e-51 ref|ZP_08486333.1| CRISPR-associated protein Cas5 family [Methyl... 194 1e-47 ref|ZP_07656298.1| CRISPR-associated protein Cas5 family [Methyl... 182 2e-44 ref|YP_003760636.1| Cas5 family CRISPR-associated protein [Nitro... 172 3e-41 ref|YP_003442631.1| Cas5 family CRISPR-associated protein [Alloc... 155 4e-36 ref|YP_003039547.1| hypothetical protein PAU_00710 [Photorhabdus... 126 2e-27 ref|NP_928094.1| hypothetical protein plu0749 [Photorhabdus lumi... 124 1e-26 ref|YP_942987.1| CRISPR-associated Cas5 family protein [Psychrom... 119 3e-25 ref|YP_003713849.1| hypothetical protein XNC1_3721 [Xenorhabdus ... 114 8e-24 ref|YP_001342382.1| CRISPR-associated Cas5 family protein [Marin... 114 1e-23 ref|YP_572293.1| CRISPR-associated Cas5e family protein [Chromoh... 112 6e-23 ref|YP_387357.1| CRISPR-associated Cas5e family protein [Desulfo... 111 1e-22 ref|NP_828715.1| hypothetical protein SAV_7539 [Streptomyces ave... 109 3e-22 ref|YP_003469635.1| hypothetical protein XBJ1_3753 [Xenorhabdus ... 105 6e-21 ref|ZP_08536246.1| hypothetical Protein MAMP_02709 [Methylophaga... 103 2e-20 ref|YP_004428011.1| CRISPR-associated protein Cas5 family [Alter... 102 3e-20 ref|YP_003797210.1| CRISPR-associated protein Cas5e [Candidatus ... 100 1e-19 ref|YP_797164.1| hypothetical protein LBL_0660 [Leptospira borgp... 100 2e-19 ref|YP_801661.1| hypothetical protein LBJ_2452 [Leptospira borgp... 100 2e-19 ref|YP_003133574.1| CRISPR-associated protein Cas5 [Saccharomono... 100 2e-19 ref|ZP_07284435.1| CRISPR-associated protein [Streptomyces sp. C... 100 2e-19 ref|ZP_01236523.1| hypothetical protein VAS14_16317 [Vibrio angu... 99.4 4e-19 ref|ZP_07730854.1| CRISPR system CASCADE complex protein CasD [L... 99.4 4e-19 ref|YP_015490.1| hypothetical protein PBPRC0036 [Photobacterium ... 98.6 6e-19 ref|YP_002377730.1| CRISPR-associated protein Cas5 family [Cyano... 97.4 1e-18 ref|ZP_07202114.1| CRISPR system CASCADE complex protein CasD [d... 97.1 2e-18 ref|YP_001536851.1| CRISPR-associated Cas5 family protein [Salin... 97.1 2e-18 ref|ZP_08539899.1| CRISPR system CASCADE complex protein CasD [O... 96.7 2e-18 ref|ZP_07307361.1| CRISPR-associated protein [Streptomyces virid... 95.9 4e-18 ref|YP_003133262.1| CRISPR-associated protein Cas5 [Saccharomono... 94.7 8e-18 dbj|BAE95441.1| CRISPR-associated protein [Streptomyces kanamyce... 94.7 8e-18 ref|ZP_06560097.1| CRISPR system CASCADE complex protein CasD [M... 94.7 9e-18 ref|YP_425263.1| CRISPR-associated Cas5e family protein [Rhodosp... 94.0 1e-17 ref|ZP_01158691.1| hypothetical protein SKA34_08673 [Photobacter... 94.0 1e-17 ref|ZP_04705535.1| hypothetical protein SalbJ_26494 [Streptomyce... 94.0 2e-17 ref|YP_250425.1| hypothetical protein jk0645 [Corynebacterium je... 93.2 3e-17 ref|ZP_03915771.1| CRISPR-associated protein [Anaerococcus lacto... 93.2 3e-17 ref|ZP_08047462.1| CRISPR-associated protein Cas5 [Streptococcus... 92.8 3e-17 ref|ZP_07735177.1| CRISPR system CASCADE complex protein CasD [L... 92.8 3e-17 emb|CAJ88800.1| conserved hypothetical protein [Streptomyces amb... 92.4 4e-17 ref|ZP_07733767.1| CRISPR system CASCADE complex protein CasD [L... 92.0 6e-17 ref|ZP_03833700.1| hypothetical protein PcarcW_20953 [Pectobacte... 92.0 6e-17 gb|EDJ48907.1| hypothetical protein GOS_1686317 [marine metagenome] 92.0 7e-17 ref|ZP_07903531.1| CRISPR-associated protein [Eubacterium saburr... 91.7 7e-17 ref|ZP_06414951.1| CRISPR-associated protein Cas5 family [Franki... 91.7 8e-17 ref|YP_001275017.1| CRISPR-associated Cas5 family protein [Rosei... 91.7 8e-17 ref|YP_004202416.1| CRISPR-associated protein Cas5 [Thermus scot... 91.7 9e-17 ref|YP_565318.1| CRISPR-associated Cas5e family protein [Methano... 91.7 9e-17 ref|ZP_07093803.1| CRISPR system CASCADE complex protein CasD [P... 91.3 9e-17 ref|ZP_07739088.1| CRISPR-associated protein, Cas5e family [Amin... 91.3 1e-16 ref|YP_003298568.1| CRISPR-associated Cas5 family protein [Therm... 90.9 1e-16 ref|YP_001234931.1| CRISPR-associated Cas5 family protein [Acidi... 90.5 2e-16 ref|YP_151962.1| hypothetical protein SPA2796 [Salmonella enteri... 90.5 2e-16 ref|NP_457329.1| hypothetical protein STY3067 [Salmonella enteri... 90.5 2e-16 ref|ZP_02092017.1| hypothetical protein FAEPRAM212_02306 [Faecal... 89.7 3e-16 ref|ZP_06827673.1| CRISPR-associated protein [Streptomyces sp. S... 89.7 3e-16 ref|ZP_07887576.1| CRISPR-associated protein cas5 [Streptococcus... 89.7 3e-16 ref|YP_001530867.1| CRISPR-associated Cas5 family protein [Desul... 89.7 3e-16 ref|YP_004616616.1| CRISPR-associated protein Cas5 family [Metha... 89.7 3e-16 ref|ZP_02683899.1| CRISPR-associated protein Cas5 [Salmonella en... 89.4 4e-16 ref|ZP_08505508.1| hypothetical protein METUNv1_02571 [Methylove... 89.4 4e-16 ref|YP_003257851.1| CRISPR-associated protein Cas5 family [Pecto... 89.0 5e-16 ref|ZP_02661038.1| CRISPR-associated protein Cas5 [Salmonella en... 89.0 5e-16 gb|EGC81843.1| CRISPR system CASCADE complex protein CasD [Anaer... 89.0 5e-16 ref|YP_308458.1| hypothetical protein cbdb_B36 [Dehalococcoides ... 88.6 7e-16 dbj|BAE95526.1| CRISPR-associated protein [Streptomyces kanamyce... 88.6 7e-16 ref|ZP_08324810.1| CRISPR system CASCADE complex protein CasD [P... 88.2 8e-16 gb|AEI37908.1| CRISPR-associated protein Cas5 family [Zymomonas ... 88.2 8e-16 ref|YP_003484525.1| hypothetical protein SmuNN2025_0607 [Strepto... 87.8 1e-15 gb|ADW07904.1| CRISPR-associated protein Cas5 family [Streptomyc... 87.4 1e-15 ref|ZP_04998419.1| crispr-associated protein [Streptomyces sp. M... 87.4 2e-15 ref|YP_001220072.1| CRISPR-associated Cas5 family protein [Acidi... 87.0 2e-15 dbj|BAJ32233.1| putative CRISPR-associated protein [Kitasatospor... 86.7 2e-15 ref|YP_289648.1| CRISPR-associated Cas5e family protein [Thermob... 86.7 2e-15 ref|YP_003133587.1| CRISPR-associated protein, Cas5e family [Sac... 86.7 3e-15 ref|ZP_06368471.1| CRISPR-associated protein Cas5 family [Desulf... 86.7 3e-15 ref|YP_003679228.1| CRISPR-associated protein Cas5 family [Nocar... 86.7 3e-15 ref|YP_685785.1| hypothetical protein RCIX1151 [uncultured metha... 86.7 3e-15 ref|ZP_07610873.1| CRISPR-associated protein Cas5 family [Strept... 86.3 3e-15 ref|ZP_04653549.1| CRISPR-associated protein Cas5 [Salmonella en... 86.3 4e-15 gb|EGI92622.1| CRISPR-associated protein Cas5 domain protein [Sh... 85.9 4e-15 ref|ZP_07333998.1| CRISPR-associated protein Cas5 family [Desulf... 85.9 4e-15 ref|YP_003300273.1| CRISPR-associated Cas5 family protein [Therm... 85.9 4e-15 ref|YP_004372357.1| CRISPR-associated protein, Cas5e family [Cor... 85.1 7e-15 ref|YP_001661547.1| CRISPR-associated Cas5 family protein [Strep... 85.1 8e-15 ref|YP_003323627.1| CRISPR-associated protein Cas5 family [Therm... 84.7 1e-14 ref|YP_289655.1| CRISPR-associated Cas5e family protein [Thermob... 84.0 1e-14 ref|ZP_07272640.1| CRISPR-associated protein [Streptomyces sp. S... 84.0 2e-14 dbj|BAJ26390.1| putative CRISPR-associated protein [Kitasatospor... 84.0 2e-14 ref|ZP_08365221.1| CRISPR-associated protein Cas5 [Escherichia c... 84.0 2e-14 ref|YP_003114635.1| CRISPR-associated protein Cas5 family [Caten... 84.0 2e-14 ref|ZP_03934572.1| CRISPR-associated protein [Corynebacterium st... 83.2 3e-14 ref|ZP_02043675.1| hypothetical protein ACTODO_00523 [Actinomyce... 82.8 3e-14 ref|YP_003652141.1| Cas5 family CRISPR-associated protein [Therm... 82.8 3e-14 ref|YP_003437885.1| CRISPR-associated protein Cas5 family [Klebs... 82.8 4e-14 ref|YP_001438899.1| hypothetical protein ESA_02834 [Cronobacter ... 82.4 4e-14 ref|ZP_05965615.1| CRISPR-associated protein Cas5 [Bifidobacteri... 82.4 5e-14 ref|YP_003202376.1| CRISPR-associated Cas5 family protein [Nakam... 82.4 5e-14 ref|ZP_06609098.1| CRISPR-associated protein Cas5 [Actinomyces o... 82.0 6e-14 ref|YP_479144.1| CRISPR-associated Cas5e family protein [Frankia... 82.0 7e-14 ref|ZP_02900922.1| CRISPR-associated protein Cas5 [Escherichia a... 81.6 7e-14 ref|YP_003109597.1| CRISPR-associated protein Cas5 family [Acidi... 81.6 8e-14 ref|ZP_06264280.1| CRISPR system CASCADE complex protein CasD [P... 81.6 8e-14 ref|YP_002989167.1| CRISPR-associated protein Cas5 family [Dicke... 81.6 8e-14 ref|YP_003810004.1| CRISPR-associated protein, CT1976 [gamma pro... 81.6 9e-14 ref|YP_004606591.1| CRISPR-associated protein [Corynebacterium r... 81.3 1e-13 ref|ZP_08384969.1| CRISPR-associated protein Cas5 [Escherichia c... 80.9 1e-13 emb|CBL34420.1| CRISPR-associated protein Cas5, Ecoli subtype [E... 80.9 1e-13 ref|YP_003744990.1| crispr-associated protein, cas5e-type [Ralst... 80.9 1e-13 ref|YP_001464079.1| CRISPR-associated Cas5 family protein [Esche... 80.9 2e-13 gb|AEG68388.1| CRISPR-associated protein, Cas5e-type [Ralstonia ... 80.5 2e-13 gb|EGL71483.1| hypothetical protein CSE899_17572 [Cronobacter sa... 80.5 2e-13 ref|YP_003767958.1| hypothetical protein AMED_5809 [Amycolatopsi... 80.5 2e-13 ref|YP_003331954.1| Cas5 family CRISPR-associated protein [Dicke... 80.5 2e-13 ref|ZP_03028602.1| CRISPR-associated protein Cas5 [Escherichia c... 80.5 2e-13 ref|ZP_08355236.1| CRISPR-associated protein Cas5 [Escherichia c... 80.5 2e-13 ref|NP_289306.1| hypothetical protein Z4066 [Escherichia coli O1... 80.5 2e-13 gb|EFZ58577.1| CRISPR-associated protein Cas5 domain protein [Es... 80.1 2e-13 ref|ZP_07096055.1| CRISPR-associated protein Cas5 [Escherichia c... 80.1 2e-13 ref|ZP_05365997.1| CRISPR-associated protein Cas5 [Corynebacteri... 80.1 2e-13 ref|YP_001691075.1| hypothetical protein FMG_P0058 [Finegoldia m... 80.1 2e-13 ref|ZP_07799842.1| CRISPR-associated protein Cas5 [Faecalibacter... 79.7 3e-13 ref|ZP_07135554.1| CRISPR-associated protein Cas5 [Escherichia c... 79.7 3e-13 ref|YP_001843511.1| hypothetical protein LAF_0695 [Lactobacillus... 79.7 3e-13 ref|ZP_03349717.1| hypothetical protein Salmonentericaenterica_0... 79.7 3e-13 gb|EGC05372.1| CRISPR protein [Escherichia fergusonii B253] >gb|... 79.7 3e-13 ref|ZP_05949225.1| hypothetical protein EscherichiacoliO157EcO_1... 79.0 5e-13 ref|YP_120639.1| hypothetical protein nfa44240 [Nocardia farcini... 79.0 5e-13 ref|YP_001952710.1| CRISPR-associated protein Cas5 family [Geoba... 79.0 6e-13 gb|EAY58008.1| CRISPR-ssociated protein, Cas5 [Leptospirillum ru... 78.6 6e-13 ref|ZP_06835008.1| CRISPR-associated protein Cas5 [Gluconacetoba... 78.6 6e-13 ref|YP_002294287.1| hypothetical protein ECSE_3012 [Escherichia ... 78.6 7e-13 ref|YP_003209411.1| hypothetical protein CTU_10480 [Cronobacter ... 78.6 7e-13 ref|YP_001825057.1| CRISPR-associated Cas5e family protein [Stre... 78.6 8e-13 ref|YP_001678815.1| crispr-associated protein cas5 [Heliobacteri... 77.8 1e-12 ref|ZP_07400244.1| CRISPR-associated protein cas5 [Peptoniphilus... 77.8 1e-12 gb|EGB73716.1| CRISPR protein [Escherichia coli TW10509] 77.8 1e-12 ref|ZP_07151358.1| CRISPR-associated protein Cas5 [Escherichia c... 77.8 1e-12 ref|ZP_08019575.1| CRISPR-associated protein Cas5 family protein... 77.4 1e-12 ref|YP_356383.1| hypothetical protein Pcar_0960 [Pelobacter carb... 77.4 1e-12 ref|YP_003189273.1| CRISPR-associated protein Cas5 [Acetobacter ... 77.4 1e-12 ref|ZP_03310304.1| hypothetical protein DESPIG_00187 [Desulfovib... 77.4 1e-12 ref|YP_113415.1| CRISPR-associated Cas5e family protein [Methylo... 77.4 2e-12 ref|ZP_07190554.1| CRISPR-associated protein Cas5 [Escherichia c... 77.4 2e-12 ref|YP_002404022.1| hypothetical protein EC55989_3030 [Escherich... 77.4 2e-12 ref|YP_311742.1| putative cytoplasmic protein [Shigella sonnei S... 77.4 2e-12 gb|EGB42475.1| CRISPR-associated protein [Escherichia coli H120] 77.0 2e-12 ref|ZP_05861273.1| CRISPR-associated protein Cas5, Ecoli subtype... 77.0 2e-12 ref|YP_003235838.1| hypothetical protein ECO111_3481 [Escherichi... 77.0 2e-12 ref|ZP_08292605.1| CRISPR system CASCADE complex protein CasD [A... 77.0 2e-12 ref|YP_002388217.1| hypothetical protein ECIAI1_2860 [Escherichi... 77.0 2e-12 ref|ZP_08241299.1| CRISPR-associated protein cas5 [Atopobium vag... 77.0 2e-12 ref|ZP_05433323.1| putative cytoplasmic protein [Shigella sp. D9... 76.6 2e-12 gb|EBF86743.1| hypothetical protein GOS_9527715 [marine metagenome] 76.6 2e-12 ref|YP_001229612.1| CRISPR-associated Cas5 family protein [Geoba... 76.6 3e-12 ref|ZP_03917749.1| CRISPR-associated protein [Corynebacterium gl... 76.3 3e-12 ref|ZP_06265842.1| crispr-associated protein Cas5 [Pyramidobacte... 76.3 3e-12 ref|ZP_06159640.1| CRISPR-associated protein Cas5 [Slackia exigu... 76.3 3e-12 ref|ZP_07124417.1| CRISPR-associated protein Cas5 [Escherichia c... 76.3 3e-12 gb|AEA31975.1| CRISPR-associated protein [Lactobacillus amylovor... 76.3 3e-12 ref|ZP_06658642.1| CRISPR-associated protein cas5 [Escherichia c... 76.3 3e-12 ref|YP_003373987.1| CRISPR system CASCADE complex protein CasD [... 76.3 4e-12 ref|YP_001801360.1| CRISPR-associated protein [Corynebacterium u... 76.3 4e-12 ref|YP_004404948.1| CRISPR-associated Cas5 family protein [Verru... 76.3 4e-12 ref|ZP_07100694.1| CRISPR-associated protein Cas5 [Escherichia c... 76.3 4e-12 ref|YP_001744909.1| CRISPR-associated Cas5 family protein [Esche... 75.9 4e-12 ref|ZP_05752899.1| CRISPR-associated protein [Lactobacillus helv... 75.9 5e-12 ref|ZP_08552813.1| CRISPR-associated Cas5e family protein [Salin... 74.7 9e-12 ref|ZP_06897601.1| CRISPR-associated protein cas5 [Roseomonas ce... 74.7 1e-11 ref|YP_002355868.1| CRISPR-associated protein Cas5 family [Thaue... 74.7 1e-11 ref|ZP_04414159.1| CRISPR-associated protein CT1976 [Vibrio chol... 74.7 1e-11 ref|ZP_06976626.1| hypothetical protein GV51_0907 [Gardnerella v... 74.7 1e-11 ref|ZP_07665798.1| CRISPR system CASCADE complex protein CasD [G... 74.3 1e-11 ref|YP_002413771.1| hypothetical protein ECUMN_3084 [Escherichia... 74.3 1e-11 ref|YP_001218553.1| CRISPR-associated protein Cas5, ecoli subtyp... 74.3 1e-11 ref|YP_004049617.1| CRISPR-associated protein Cas5 family [Ocean... 73.9 2e-11 gb|EGL13343.1| CRISPR system CASCADE complex protein CasD [Gardn... 73.9 2e-11 ref|YP_003601682.1| CRISPR-associated protein, cas5e-type [Lacto... 73.9 2e-11 ref|ZP_08516286.1| CRISPR-associated Cas5 family protein [Coryne... 73.9 2e-11 ref|ZP_06050695.1| CRISPR-associated protein [Vibrio cholerae CT... 73.6 2e-11 ref|ZP_04690886.1| CRISPR-associated protein, CT1976 [Streptomyc... 73.6 2e-11 emb|CAH18540.1| hypothetical protein [Streptoalloteichus tenebra... 73.6 2e-11 ref|ZP_06927475.1| hypothetical protein GVAMD_0134 [Gardnerella ... 73.6 2e-11 ref|ZP_08231100.1| CRISPR-associated protein cas5 family protein... 73.2 3e-11 ref|YP_001537409.1| CRISPR-associated Cas5 family protein [Salin... 72.8 3e-11 ref|YP_004001418.1| protein [Bifidobacterium longum subsp. longu... 72.8 4e-11 ref|YP_004367834.1| CRISPR-associated protein Cas5 family [Marin... 72.8 4e-11 gb|EBF71287.1| hypothetical protein GOS_9552933 [marine metagenome] 72.4 5e-11 ref|YP_074497.1| hypothetical protein STH668 [Symbiobacterium th... 72.0 6e-11 ref|ZP_06712206.1| CRISPR-associated protein cas5, subtype [Stre... 71.6 8e-11 ref|YP_002133147.1| CRISPR-associated protein Cas5 family [Anaer... 71.2 1e-10 ref|YP_001534552.1| Cas5 family CRISPR-associated protein [Dinor... 70.9 1e-10 ref|YP_003289774.1| CRISPR-associated protein Cas5 family [Rhodo... 70.9 1e-10 ref|YP_710743.1| hypothetical protein FRAAL0456 [Frankia alni AC... 70.9 1e-10 ref|YP_003698057.1| CRISPR-associated protein Cas5 family [Arcan... 70.9 1e-10 ref|YP_002834437.1| CRISPR-associated protein [Corynebacterium a... 70.5 2e-10 ref|YP_745198.1| hypothetical protein GbCGDNIH1_1377 [Granulibac... 70.1 2e-10 ref|ZP_07981242.1| hypothetical protein SSA3_31592 [Streptomyces... 70.1 3e-10 ref|YP_002466639.1| CRISPR-associated protein Cas5 family [Metha... 69.7 3e-10 ref|ZP_06581742.1| crispr-associated protein cas5 family protein... 69.7 3e-10 ref|ZP_08216757.1| CRISPR-associated Cas5 family protein [Strept... 69.7 3e-10 ref|YP_003508779.1| Cas5 family CRISPR-associated protein [Meiot... 69.7 3e-10 ref|ZP_07985495.1| hypothetical protein SSA3_15935 [Streptomyces... 69.7 3e-10 ref|ZP_06772211.1| CRISPR-associated protein Cas5 [Streptomyces ... 69.7 3e-10 ref|YP_003718071.1| CRISPR-associated protein [Mobiluncus curtis... 69.3 4e-10 ref|YP_902004.1| CRISPR-associated Cas5 family protein [Pelobact... 68.9 5e-10 ref|ZP_05006970.1| crispr-associated protein [Streptomyces clavu... 68.9 5e-10 ref|YP_004304570.1| CRISPR-associated protein Cas5 family [polym... 68.9 6e-10 ref|ZP_07372888.1| CRISPR-associated protein cas5 [Mobiluncus cu... 68.6 6e-10 gb|EES53470.1| CRISPR-associated protein, Cas5 [Leptospirillum f... 68.6 7e-10 ref|YP_001602451.1| hypothetical protein GDI_2206 [Gluconacetoba... 68.6 7e-10 ref|ZP_05077982.1| CRISPR-associated protein Cas5, Ecoli subtype... 68.6 8e-10 ref|ZP_07976074.1| CRISPR-associated Cas5e family protein [Strep... 68.2 9e-10 ref|YP_741794.1| CRISPR-associated Cas5 family protein [Alkalili... 67.4 2e-09 gb|ECT12416.1| hypothetical protein GOS_7088405 [marine metagenome] 67.4 2e-09 ref|YP_003705960.1| Cas5 family CRISPR-associated protein [Truep... 67.0 2e-09 ref|ZP_03993262.1| conserved hypothetical protein [Mobiluncus mu... 67.0 2e-09 ref|YP_594141.1| CRISPR-associated Cas5e family protein [Deinoco... 67.0 2e-09 ref|YP_502836.1| CRISPR-associated Cas5e family protein [Methano... 66.6 3e-09 ref|YP_003684639.1| CRISPR-associated protein Cas5 family [Meiot... 66.2 3e-09 ref|YP_145430.1| hypothetical protein TTHB191 [Thermus thermophi... 66.2 4e-09 ref|YP_004264317.1| CRISPR-associated protein Cas5 family [Deino... 65.9 4e-09 ref|YP_004452046.1| Cas5 family CRISPR-associated protein [Cellu... 65.5 6e-09 ref|ZP_05745537.1| CRISPR-associated protein [Lactobacillus antr... 65.5 6e-09 ref|ZP_04932938.1| hypothetical protein PA2G_00233 [Pseudomonas ... 65.5 7e-09 ref|YP_003003265.1| Cas5 family CRISPR-associated protein [Dicke... 65.5 7e-09 ref|ZP_03971211.1| CRISPR-associated protein [Corynebacterium gl... 65.1 8e-09 ref|YP_805654.1| CRISPR-associated protein [Lactobacillus casei ... 64.7 9e-09 ref|YP_812841.1| CRISPR-associated protein [Lactobacillus delbru... 64.7 1e-08 ref|YP_618906.1| hypothetical protein Ldb0872 [Lactobacillus del... 64.7 1e-08 ref|YP_004628676.1| hypothetical protein CULC22_00036 [Corynebac... 64.7 1e-08 gb|AEG80579.1| hypothetical protein CULC809_00038 [Corynebacteri... 64.3 1e-08 ref|YP_217859.1| putative cytoplasmic protein [Salmonella enteri... 64.3 1e-08 ref|YP_004033823.1| crispr-associated protein [Lactobacillus del... 63.9 2e-08 ref|ZP_07303560.1| CRISPR-associated protein cas5 [Streptomyces ... 63.5 3e-08 ref|YP_002491202.1| CRISPR-associated protein Cas5 family [Anaer... 63.2 3e-08 ref|YP_001189237.1| CRISPR-associated Cas5e family protein [Pseu... 63.2 3e-08 ref|ZP_07091777.1| CRISPR system CASCADE complex protein CasD [L... 63.2 3e-08 ref|YP_002798909.1| CRISPR-associated protein, CT1976 [Azotobact... 63.2 3e-08 ref|YP_002919861.1| CRISPR-associated Cse5e family protein [Kleb... 62.8 4e-08 ref|YP_003366554.1| CRISPR-associated protein [Citrobacter roden... 62.4 5e-08 gb|EFY11131.1| CRISPR-associated protein Cas5 [Salmonella enteri... 62.0 6e-08 gb|EGI92820.1| CRISPR-associated protein family protein [Shigell... 62.0 6e-08 ref|YP_002147838.1| CRISPR-associated protein Cas5 [Salmonella e... 61.6 8e-08 emb|CCB82589.1| CRISPR-associated protein [Lactobacillus pentosu... 60.8 1e-07 ref|ZP_02832354.1| CRISPR-associated protein Cas5 [Salmonella en... 60.8 2e-07 ref|ZP_02697833.1| crispr-associated protein Cas5 [Salmonella en... 60.8 2e-07 ref|YP_002016082.1| CRISPR-associated protein Cas5 family protei... 60.5 2e-07 ref|ZP_02343962.1| CRISPR-associated protein Cas5 [Salmonella en... 60.5 2e-07 ref|ZP_07402672.1| CRISPR system CASCADE complex protein CasD [C... 60.5 2e-07 ref|NP_461861.1| cytoplasmic protein [Salmonella enterica subsp.... 60.5 2e-07 ref|YP_002479512.1| CRISPR-associated protein Cas5 family [Desul... 60.5 2e-07 ref|YP_745517.1| hypothetical protein GbCGDNIH1_1696 [Granulibac... 60.5 2e-07 ref|ZP_02667616.1| CRISPR-associated protein Cas5 [Salmonella en... 60.5 2e-07 ref|YP_002227682.1| hypothetical protein SG2843 [Salmonella ente... 60.1 2e-07 ref|YP_002216907.1| CRISPR-associated protein Cas5 [Salmonella e... 59.7 3e-07 ref|YP_409117.1| cytoplasmic protein [Shigella boydii Sb227] >gb... 59.3 5e-07 ref|YP_002299509.1| CRISPR-associated protein, CT1976 family [Rh... 58.9 5e-07 ref|YP_001960549.1| CRISPR-associated protein Cas5 family [Chlor... 58.5 8e-07 ref|YP_002500558.1| CRISPR-associated protein Cas5 family [Methy... 58.5 8e-07 ref|ZP_06550463.1| CRISPR-associated protein cas5, subtype [Kleb... 58.5 8e-07 ref|ZP_06014707.1| conserved hypothetical protein [Klebsiella pn... 58.5 8e-07 ref|ZP_08307346.1| CRISPR system CASCADE complex protein CasD [K... 58.2 9e-07 ref|YP_004411733.1| CRISPR-associated protein Cas5 family [Spiro... 57.8 1e-06 ref|YP_474206.1| CRISPR-associated Cas5 family protein [Synechoc... 57.8 1e-06 ref|ZP_08219864.1| CRISPR-associated Cas5 family protein [Strept... 57.4 2e-06 ref|YP_003321655.1| CRISPR-associated protein Cas5 family [Sphae... 57.4 2e-06 ref|ZP_06355215.1| CRISPR-associated protein Cas5 [Citrobacter y... 55.5 7e-06 ref|YP_002434079.1| CRISPR-associated protein Cas5 family [Desul... 55.1 8e-06 ref|YP_002484765.1| Cas5 family CRISPR-associated protein [Cyano... 54.3 1e-05 ref|YP_003167473.1| Cas5 family CRISPR-associated protein [Candi... 53.9 2e-05 ref|ZP_04448348.1| hypothetical protein BIFANG_03354 [Bifidobact... 52.4 5e-05 ref|ZP_03339556.1| hypothetical protein Salmonelentericaenterica... 50.8 1e-04 gb|EBF80641.1| hypothetical protein GOS_9537547 [marine metagenome] 50.4 2e-04 ref|ZP_03323605.1| hypothetical protein BIFCAT_00373 [Bifidobact... 50.1 3e-04 ref|YP_425437.1| CRISPR-associated Cas5e family protein [Rhodosp... 49.7 3e-04 dbj|BAJ19034.1| hypothetical protein [Streptomyces sp. SANK 62799] 48.9 5e-04 ref|NP_940516.1| hypothetical protein DIP2208 [Corynebacterium d... 48.9 6e-04 ref|YP_001881501.1| CRISPR-associated protein Cas5 [Shigella boy... 48.5 7e-04 ref|ZP_07701602.1| CRISPR-associated protein Cas5 [Lactobacillus... 48.5 7e-04 ref|ZP_03927592.1| CRISPR-associated Cas5 family protein [Actino... 48.5 8e-04 gb|ECU86540.1| hypothetical protein GOS_3006111 [marine metagenome] 48.1 0.001 ref|ZP_08457094.1| putative CRISPR-associated protein cas5, subt... 45.8 0.004 ref|NP_662852.1| hypothetical protein CT1976 [Chlorobium tepidum... 43.5 0.025 gb|ECP12389.1| hypothetical protein GOS_6251286 [marine metagenome] 42.4 0.049 >ref|ZP_07164393.1| CRISPR-associated protein Cas5 [Escherichia coli MS 116-1] gb|AAA69267.1| ORF_f226 [Escherichia coli str. K-12 substr. MG1655] gb|EFK13798.1| CRISPR-associated protein Cas5 [Escherichia coli MS 116-1] Length=226 Score = 463 bits (1191), Expect = 1e-128, Method: Compositional matrix adjust. Identities = 224/224 (100%), Positives = 224/224 (100%), Gaps = 0/224 (0%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES Sbjct 3 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 62 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL Sbjct 63 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 122 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD Sbjct 123 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 182 Query 181 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 224 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ Sbjct 183 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 226 >ref|AP_003324.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110] ref|NP_417237.2| CRISP RNA (crRNA) containing Cascade antiviral complex protein [Escherichia coli str. K-12 substr. MG1655] ref|YP_001731652.1| hypothetical protein ECDH10B_2925 [Escherichia coli str. K-12 substr. DH10B] 12 more sequence titles Length=224 Score = 462 bits (1190), Expect = 1e-128, Method: Compositional matrix adjust. Identities = 224/224 (100%), Positives = 224/224 (100%), Gaps = 0/224 (0%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES Sbjct 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL Sbjct 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD Sbjct 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 Query 181 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 224 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ Sbjct 181 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 224 >ref|YP_001459524.1| CRISPR-associated Cas5 family Ecoli subtype protein [Escherichia coli HS] ref|ZP_03001517.1| CRISPR-associated protein Cas5 [Escherichia coli 53638] gb|ABV07141.1| CRISPR-associated protein Cas5, Ecoli subtype [Escherichia coli HS] gb|EDU64549.1| CRISPR-associated protein Cas5 [Escherichia coli 53638] Length=226 Score = 430 bits (1106), Expect = 6e-119, Method: Compositional matrix adjust. Identities = 218/224 (97%), Positives = 222/224 (99%), Gaps = 0/224 (0%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES Sbjct 3 MKSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 62 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFT+A+ Sbjct 63 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTIAI 122 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 WLTP ATMV+SELEKAVLKPRYTPYLGRRSCPLTHPLFL TCQASDPQKALLNYEPVGGD Sbjct 123 WLTPQATMVMSELEKAVLKPRYTPYLGRRSCPLTHPLFLATCQASDPQKALLNYEPVGGD 182 Query 181 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 224 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ Sbjct 183 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 226 >ref|YP_001723951.1| CRISPR-associated Cas5 family protein [Escherichia coli ATCC 8739] ref|ZP_04871859.1| CRISPR-associated protein cas5 family [Escherichia sp. 1_1_43] gb|ACA76624.1| CRISPR-associated protein Cas5 family [Escherichia coli ATCC 8739] gb|EEH71446.1| CRISPR-associated protein cas5 family [Escherichia sp. 1_1_43] emb|CBJ02448.1| CRISPR-associated protein [Escherichia coli ETEC H10407] Length=224 Score = 425 bits (1093), Expect = 2e-117, Method: Compositional matrix adjust. Identities = 218/224 (97%), Positives = 219/224 (97%), Gaps = 0/224 (0%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES Sbjct 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL Sbjct 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 WLTP ATMV+SELEKAVLKPRYTPYLGRRSCPLT PLFLGTCQASDPQK LLNYEPVGGD Sbjct 121 WLTPQATMVMSELEKAVLKPRYTPYLGRRSCPLTQPLFLGTCQASDPQKVLLNYEPVGGD 180 Query 181 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 224 IYSEESV GHHLKFT RDEPMITLPRQFASREWYVIKGGMDVSQ Sbjct 181 IYSEESVDGHHLKFTVRDEPMITLPRQFASREWYVIKGGMDVSQ 224 >ref|YP_002381514.1| hypothetical protein EFER_0306 [Escherichia fergusonii ATCC 35469] emb|CAQ87871.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469] gb|EGB62263.1| CRISPR protein cas5 [Escherichia coli M863] Length=224 Score = 421 bits (1082), Expect = 4e-116, Method: Compositional matrix adjust. Identities = 216/224 (96%), Positives = 218/224 (97%), Gaps = 0/224 (0%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 MRSYLILRLAGPMQAWG PTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQ LSES Sbjct 1 MRSYLILRLAGPMQAWGLPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQVLSES 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVA+ Sbjct 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAI 120 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 WLTP ATMV+SELEKAVLKPRYTPYLGRRSCPLT PLFLGTCQASDPQKALLNYEPVGGD Sbjct 121 WLTPQATMVMSELEKAVLKPRYTPYLGRRSCPLTQPLFLGTCQASDPQKALLNYEPVGGD 180 Query 181 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 224 IYSEESV GHHLKFT RDEPMITLPRQFASREWYVIKGGMDVSQ Sbjct 181 IYSEESVDGHHLKFTVRDEPMITLPRQFASREWYVIKGGMDVSQ 224 >gb|EGB32076.1| CRISPR-associated protein cas5 [Escherichia coli E1520] Length=212 Score = 402 bits (1032), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 206/212 (97%), Positives = 207/212 (97%), Gaps = 0/212 (0%) Query 13 MQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELIL 72 MQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELIL Sbjct 1 MQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELIL 60 Query 73 DDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISE 132 DDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP ATMV+SE Sbjct 61 DDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPQATMVMSE 120 Query 133 LEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSEESVTGHHL 192 LEKAVLKPRYTPYLGRRSCPLT PLFLGTCQASDPQK LLNYEPVGGDIYSEESV GHHL Sbjct 121 LEKAVLKPRYTPYLGRRSCPLTQPLFLGTCQASDPQKVLLNYEPVGGDIYSEESVDGHHL 180 Query 193 KFTARDEPMITLPRQFASREWYVIKGGMDVSQ 224 KFT RDEPMITLPRQFASREWYVIKGGMDVSQ Sbjct 181 KFTVRDEPMITLPRQFASREWYVIKGGMDVSQ 212 >gb|EGB37594.1| CRISPR protein cas5 [Escherichia coli E482] Length=164 Score = 335 bits (860), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 158/164 (96%), Positives = 162/164 (98%), Gaps = 0/164 (0%) Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 +QFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFT+A+ Sbjct 1 MQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTIAI 60 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 WLTP ATMV+SELEKAVLKPRYTPYLGRRSCPLTHPLFL TCQASDPQKALLNYEPVGGD Sbjct 61 WLTPQATMVMSELEKAVLKPRYTPYLGRRSCPLTHPLFLATCQASDPQKALLNYEPVGGD 120 Query 181 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 224 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ Sbjct 121 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 164 >gb|AEE57978.1| CRISPR-associated protein [Escherichia coli UMNK88] Length=164 Score = 330 bits (847), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 157/164 (95%), Positives = 159/164 (96%), Gaps = 0/164 (0%) Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 +QFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL Sbjct 1 MQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 60 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 WLTP ATMV+SELEKAVLKPRYTPYLGRRSCPLT PLFLGTCQASDPQK LLNYEPVGGD Sbjct 61 WLTPQATMVMSELEKAVLKPRYTPYLGRRSCPLTQPLFLGTCQASDPQKVLLNYEPVGGD 120 Query 181 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 224 IYSEESV GHHLKFT RDEPMITLPRQFASREWYVIKGGMDVSQ Sbjct 121 IYSEESVDGHHLKFTVRDEPMITLPRQFASREWYVIKGGMDVSQ 164 >gb|EGE63174.1| CRISPR-associated protein family protein [Escherichia coli STEC_7v] Length=160 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 153/160 (95%), Positives = 156/160 (97%), Gaps = 0/160 (0%) Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 +RCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVA+WLTP Sbjct 1 MRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAIWLTP 60 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSE 184 ATMV+SELEKAVLKPRYTPYLGRRSCPLT PLFLGTCQASDPQKALLNYEPVGGDIYSE Sbjct 61 QATMVMSELEKAVLKPRYTPYLGRRSCPLTQPLFLGTCQASDPQKALLNYEPVGGDIYSE 120 Query 185 ESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 224 ESV GHHLKFT RDEPMITLPRQFASREWYVIKGGMDVSQ Sbjct 121 ESVDGHHLKFTVRDEPMITLPRQFASREWYVIKGGMDVSQ 160 >ref|YP_002647840.1| CRISPR-associated Cas5 family protein [Erwinia pyrifoliae Ep1/96] emb|CAX54590.1| CRISPR-associated protein Cas5, Ecoli subtype [Erwinia pyrifoliae Ep1/96] emb|CAY73236.1| CRISPR-associated protein Cas5, Ecoli subtype [Erwinia pyrifoliae DSM 12163] Length=218 Score = 222 bits (565), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 128/221 (57%), Positives = 155/221 (70%), Gaps = 8/221 (3%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI+RL GPMQAWG P FE TRP+ FPTRSGLLGLLGACLGI R D ++LQ L++S Sbjct 1 MTDYLIMRLCGPMQAWGLPGFEATRPSAPFPTRSGLLGLLGACLGIPRSDRTALQQLADS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 V+FAVRCD DDR D+HTV AR+++ LKS++TI TWREYL DA+FTVAL Sbjct 61 VRFAVRCD----DDRPYQTVSRVDFHTVQDARKEHGSLKSNDTILTWREYLYDAAFTVAL 116 Query 121 WLTPHAT---MVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPV 177 W TP A + +L+ A+ KP +TPYLGRRSCPL+ PLF QA P +AL P Sbjct 117 W-TPAADKPGYTLEQLKIALQKPVFTPYLGRRSCPLSQPLFYAQQQAQHPGQALSEASPG 175 Query 178 GGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKG 218 G IYSE +++G+ + T RDEP+I LPRQFASR WY I G Sbjct 176 KGVIYSEMAISGNERRLTMRDEPLIHLPRQFASRTWYAIAG 216 >gb|ADP09967.1| CRISPR-associated Cas5 family protein [Erwinia sp. Ejp617] Length=218 Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 127/221 (57%), Positives = 153/221 (69%), Gaps = 8/221 (3%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI+RL GPMQAWG P FE TRP+ FPTRSGLLGLLGACLGIQR D S+LQ L++S Sbjct 1 MTDYLIMRLCGPMQAWGLPGFEATRPSASFPTRSGLLGLLGACLGIQRSDRSALQQLADS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 V+FAVRCD DDR D+HTV AR+++ LKS++TI TWREYL DA+FTVAL Sbjct 61 VRFAVRCD----DDRPYKTVSRVDFHTVQDARKEHGSLKSNDTILTWREYLYDAAFTVAL 116 Query 121 WLTPHATM---VISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPV 177 W TP A + +L+ A+ KP +TPYLGRRSCPL+ PLF QA +AL P Sbjct 117 W-TPAADQPGYTLEQLKLALQKPVFTPYLGRRSCPLSQPLFYAQHQAQHAGQALSEALPG 175 Query 178 GGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKG 218 G IYSE ++ G+ + T RDEP+ LPRQFA+R WY I G Sbjct 176 KGVIYSETAIGGNERRLTMRDEPLTHLPRQFANRTWYAIAG 216 >ref|NP_952441.1| CRISPR-associated Cas5e family protein [Geobacter sulfurreducens PCA] gb|AAR34764.1| CRISPR-associated protein, CT1976 family [Geobacter sulfurreducens PCA] gb|ADI84215.1| CRISPR processing complex protein CasD [Geobacter sulfurreducens KN400] Length=226 Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 131/229 (57%), Positives = 162/229 (70%), Gaps = 8/229 (3%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 MR YLIL+L GPMQ+WG+ TFEG RP+G FPTRS LLGLLGACLGI+R++ LQ L++S Sbjct 1 MRDYLILKLQGPMQSWGEHTFEGKRPSGNFPTRSALLGLLGACLGIRRNEAGRLQQLADS 60 Query 61 VQFAVRCDE---LILDDRRVSVTGLR--DYHTVLGAREDYRGLKSHETIQTWREYLCDAS 115 V FAVR +E + D R+ S+ ++ DYHTV AREDY GLKSHETIQTWREYL DA+ Sbjct 61 VAFAVRKEERFRIRHDGRKTSLPIIKATDYHTVRDAREDYFGLKSHETIQTWREYLFDAT 120 Query 116 FTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 +TVA+W T AT+ + ELE+AV P +TPYLGRRSCPL+ PLF + A++ AL Sbjct 121 YTVAVWNTDVATISLVELEQAVKSPHFTPYLGRRSCPLSRPLFEMSFSAANACDALRMIP 180 Query 176 PVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 224 GG IYSEE G RD P++ PRQFASR +V GG+DVS+ Sbjct 181 SDGGVIYSEEP--GETRTIRLRDVPLVRQPRQFASRNVHVY-GGVDVSE 226 >emb|CBX81699.1| CRISPR-associated protein Cas5, Ecoli subtype [Erwinia amylovora ATCC BAA-2158] Length=218 Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 125/221 (56%), Positives = 153/221 (69%), Gaps = 8/221 (3%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI+RL GPMQAWG P FE TR + FPTRSGLLGLLGACLGI R D ++LQ L++S Sbjct 1 MTDYLIMRLCGPMQAWGLPGFEATRSSASFPTRSGLLGLLGACLGIPRSDRTALQKLADS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 V+FAVRCD DD D+HTV AR+++ LKS++TI TWREYL DA+FTVAL Sbjct 61 VRFAVRCD----DDSPYKAVSRVDFHTVQDARKEHGSLKSNDTILTWREYLYDAAFTVAL 116 Query 121 WLTPHATMV---ISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPV 177 W TP A + + +L+ A+ KP +TPYLGRRSCPL+ PLF QA +AL P Sbjct 117 W-TPAADQLGYTLEQLKLALQKPVFTPYLGRRSCPLSQPLFYAQHQAEHAGQALREASPG 175 Query 178 GGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKG 218 G IYSE +++G+ + T RDEP+I LPRQFASR WY I G Sbjct 176 QGVIYSETAISGNERRLTMRDEPLIHLPRQFASRTWYAIAG 216 >ref|YP_003532171.1| CRISPR-associated protein Cas5 [Erwinia amylovora CFBP1430] ref|YP_003537856.1| CRISPR-associated protein [Erwinia amylovora ATCC 49946] emb|CBJ45441.1| CRISPR-associated protein [Erwinia amylovora ATCC 49946] emb|CBA22468.1| CRISPR-associated protein Cas5, Ecoli subtype [Erwinia amylovora CFBP1430] Length=218 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 125/221 (56%), Positives = 151/221 (68%), Gaps = 8/221 (3%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI+RL GPMQAWG P FE TR + FPTRSGLLGLLGACLGI R D ++LQ L++S Sbjct 1 MTDYLIMRLCGPMQAWGLPGFEATRSSASFPTRSGLLGLLGACLGIPRSDRTALQKLADS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 V+FAVRCD DD D+HTV AR+++ LKS++TI TWREYL DA+FTVAL Sbjct 61 VRFAVRCD----DDSPYKAVSRVDFHTVQDARKEHGSLKSNDTILTWREYLYDAAFTVAL 116 Query 121 WLTPHATM---VISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPV 177 W TP A + +L+ A+ KP +TPYLGRRSCPL+ PLF QA +AL P Sbjct 117 W-TPAADQQGYTLEQLKLALQKPVFTPYLGRRSCPLSQPLFYAQHQAEHAGQALREASPG 175 Query 178 GGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKG 218 G IYSE +++G+ T RDEP+I LPRQFASR WY I G Sbjct 176 QGVIYSETAISGNERHLTMRDEPLIHLPRQFASRTWYAIAG 216 >ref|ZP_01313568.1| CRISPR-associated protein, CT1976 [Desulfuromonas acetoxidans DSM 684] gb|EAT14747.1| CRISPR-associated protein, CT1976 [Desulfuromonas acetoxidans DSM 684] Length=228 Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 120/229 (52%), Positives = 154/229 (67%), Gaps = 6/229 (2%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M +LIL+L GPMQAWG+ +FEGTR +G FPT S LLGLLGACLGI+R++ LQ L++S Sbjct 1 MEDFLILKLQGPMQAWGEHSFEGTRSSGNFPTLSALLGLLGACLGIRRNEHGRLQQLADS 60 Query 61 VQFAVRCDELILDDRR----VSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASF 116 V FAVR + + ++V + DYHTV AR++Y GLKSHETIQTWREYL DA F Sbjct 61 VHFAVRKEVRHVKTAGSTCPLTVIKMTDYHTVQDARQNYSGLKSHETIQTWREYLQDAEF 120 Query 117 TVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEP 176 TVA+W+ AT+ +++LE+A+ KP +TPYLGRRSCPL PLF A +P +A E Sbjct 121 TVAIWVDAGATVSLADLERAIKKPIFTPYLGRRSCPLAQPLFSRKVSAQNPLQAFEQCEG 180 Query 177 VGGDIYSEESVTG-HHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ 224 GG ++++ + G RD PMI PRQFASR Y I GG VS+ Sbjct 181 AGGVVFTDADIDGLADRSIRLRDVPMINQPRQFASRTVY-IYGGPHVSE 228 >ref|ZP_08486333.1| CRISPR-associated protein Cas5 family [Methylomicrobium album BG8] gb|EGL02774.1| CRISPR-associated protein Cas5 family [Methylomicrobium album BG8] Length=217 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 117/226 (51%), Positives = 143/226 (63%), Gaps = 11/226 (4%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 MR YLIL+L GPMQAWG+ +FEG RP+ FP RS LLGLLGACLGI R D LQ L+ S Sbjct 1 MRDYLILKLQGPMQAWGRESFEGLRPSELFPGRSALLGLLGACLGIDRTDRQRLQDLAAS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 V FAVR D + DYHTV AREDYRGLKSH+TIQTWREY DA +TVA+ Sbjct 61 VSFAVRVDR--------QGQKMTDYHTVKDAREDYRGLKSHDTIQTWREYWQDACYTVAI 112 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 W A + ++ +E+A+ +P YTP LGRRSCPL PLF A AL G Sbjct 113 WANVDAPLNLAAIEQAIKQPIYTPVLGRRSCPLARPLFETKIAAESALTALAQTGANQGT 172 Query 181 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYV--IKGGMDVSQ 224 +YSEE+ G + RD P+I PRQFASR ++ ++G + VS+ Sbjct 173 LYSEENSPG-AIPLKKRDVPIIHQPRQFASRTVFMTAVQGALHVSE 217 >ref|ZP_07656298.1| CRISPR-associated protein Cas5 family [Methylobacter tundripaludum SV96] gb|EFO03788.1| CRISPR-associated protein Cas5 family [Methylobacter tundripaludum SV96] Length=230 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 141/226 (62%), Gaps = 9/226 (3%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YLI++L G MQAWG T+E RP+ FPTRSG++GLLGACLGI+R+D +L+AL +S Sbjct 1 MQDYLIIKLQGAMQAWGGHTYEDYRPSLIFPTRSGIVGLLGACLGIEREDIKALKALDKS 60 Query 61 VQFAVRCDELIL------DDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDA 114 Q VR ++ + +D+ VS+ + D+HTV AR+ G E I + REYLCDA Sbjct 61 FQLTVRTNKRKISQRESTEDKFVSMQKITDFHTVQHARK-VDGKPRPEAIVSRREYLCDA 119 Query 115 SFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNY 174 FT+A+ A + ++++A+ KP YTP+LGRRSCP+ L+ A + Q AL+ Sbjct 120 EFTLAMAFVKDADYGLEQVKQAIQKPVYTPFLGRRSCPIQSRLYEAIVNAENAQAALIKV 179 Query 175 EPVGGDIYSEESVTGHHLKFTARDEPMI-TLPRQFASREWYVIKGG 219 EP G +YSE + G T RD+P+ T RQF +R+ Y++ G Sbjct 180 EPYHGTLYSEIELDGGTPMMT-RDQPLFATKVRQFNNRKIYILGSG 224 >ref|YP_003760636.1| Cas5 family CRISPR-associated protein [Nitrosococcus watsonii C-113] gb|ADJ28315.1| CRISPR-associated protein Cas5 family [Nitrosococcus watsonii C-113] Length=222 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 112/215 (52%), Positives = 144/215 (66%), Gaps = 7/215 (3%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+S+L+L+LAG MQAWG T+E RP+ FP+RSGLLGLLGACLG++RDD + AL++S Sbjct 1 MQSFLMLKLAGMMQAWGSHTYEVYRPSLNFPSRSGLLGLLGACLGLRRDDEAGQLALAQS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 ++F+VR DE R S L D+HTVL AR+ G SH + + REYLCDASFTVA+ Sbjct 61 IRFSVRADE-----RTFSPVKLADFHTVLDARK-VGGKISHYPVVSRREYLCDASFTVAV 114 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 A + ++ L +AV +P +TPYLGRRSCPL PLF +A+D AL EP+GG Sbjct 115 KAAAAAPIPLAALIQAVQQPVFTPYLGRRSCPLQRPLFEAVVEAADSLAALSLVEPLGGV 174 Query 181 IYSEESVTGHHLKFTARDEPMITLPRQFASREWYV 215 IYSEE + RDEP+I PRQFASR Y+ Sbjct 175 IYSEEG-EAELPQLRLRDEPIIVRPRQFASRRAYI 208 >ref|YP_003442631.1| Cas5 family CRISPR-associated protein [Allochromatium vinosum DSM 180] gb|ADC61599.1| CRISPR-associated protein Cas5 family [Allochromatium vinosum DSM 180] Length=227 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 109/225 (48%), Positives = 137/225 (60%), Gaps = 15/225 (6%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M SYLILRL GPMQAWG TFE RP+ FPTRSGLLGLLGACLG+ R DT SL AL+ES Sbjct 1 MPSYLILRLDGPMQAWGTHTFEDYRPSNPFPTRSGLLGLLGACLGLDRSDTPSLDALAES 60 Query 61 VQFAVRCD--------ELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLC 112 V F VR D + ++ R T L DYHTVL AR+ G + IQ+ REYL Sbjct 61 VAFTVRLDTGAPRPGVDRLMPKRH---TKLSDYHTVLDARK-VDGSTNKFPIQSHREYLF 116 Query 113 DASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLF--LGTCQASDPQKA 170 DA+F VA+ P A+ ++ + +++ +PR+TP LGRRSCPL PL +A D + A Sbjct 117 DAAFAVAIGSRPDASFSLARIAESLRQPRFTPVLGRRSCPLGRPLLERPDCIEADDAKAA 176 Query 171 LLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYV 215 L + P GG IYSE+ + + RD P RQFA+R Y+ Sbjct 177 LAQFPPHGGLIYSEDELVSDQPTWI-RDVPRYGRHRQFATRRLYL 220 >ref|YP_003039547.1| hypothetical protein PAU_00710 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] emb|CAR67432.1| Hypothetical Protein PA-RVA13-1304 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] emb|CAQ82802.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length=252 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/173 (39%), Positives = 100/173 (57%), Gaps = 2/173 (1%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M++YL+ RL GPM +WGQP G R T +P RS +LGLLGA LGI+RD+ S L L +S Sbjct 5 MKAYLVFRLYGPMASWGQPAIGGERLTELYPGRSAILGLLGAALGIRRDNESELAKLQKS 64 Query 61 VQFAVR--CDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTV 118 V A++ ++ D + D + V +R+ + TI + R+Y CD + V Sbjct 65 VLIAIKQIVPGFLIRDYHTTQVPTHDNNVVHQSRKSELSVNKLNTILSNRDYRCDGIWVV 124 Query 119 ALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKAL 171 A+ LT HA++ + +L A+LKP + YLGR+SCP PL ++S + AL Sbjct 125 AISLTRHASLTLEQLRDALLKPVFVLYLGRKSCPPALPLCPKLIKSSKLKAAL 177 >ref|NP_928094.1| hypothetical protein plu0749 [Photorhabdus luminescens subsp. laumondii TTO1] emb|CAE13044.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length=248 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 95/167 (56%), Gaps = 18/167 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M++YL+ RL GPM +WGQP G RPT +P RS +LGLLGA LGIQRD+ S L L +S Sbjct 1 MKAYLVFRLYGPMASWGQPAVGGERPTELYPGRSAILGLLGAALGIQRDNESELAKLQKS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARED----YRGLKSH------ETIQTWREY 110 V A++ + V + +RDYHT + ++ KS TI + R+Y Sbjct 61 VLIAIK--------QTVPGSLMRDYHTTQVPTHNNNVVHQNRKSELRSDKLNTILSNRDY 112 Query 111 LCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 CD + VA+ LT HA + A+LKP + +LGR+SCPL PL Sbjct 113 RCDGIWIVAITLTEHACFTLERFRDALLKPVFILHLGRKSCPLALPL 159 >ref|YP_942987.1| CRISPR-associated Cas5 family protein [Psychromonas ingrahamii 37] gb|ABM03388.1| CRISPR-associated protein, Cas5e family [Psychromonas ingrahamii 37] Length=217 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 25/216 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 LIL+ G M A+G TF+ R FPTRS ++G+LGA +GI R++ + L ALSE ++ A Sbjct 4 LILKTEG-MSAYGLQTFDVHRRANHFPTRSAIMGILGAAMGITRENFNELYALSEQLKIA 62 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAR----EDYRGLKSHETIQTWREYLCDASFTVAL 120 V+ + +S + DYHTV R + +G+K T+REY CD+ T A+ Sbjct 63 VQVN--------LSGEKMVDYHTVQHFRSPQGKIQKGVKP-----TYREYWCDSEHTFAI 109 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 H VI +L +V P +T + GR+SCPLT PLF +P AL N+ G Sbjct 110 SAAEH---VIEKLVNSVKFPEFTLFQGRKSCPLTRPLFEAVTDDDNPANALKNHGE-QGQ 165 Query 181 IYSEESVTGHHLKFTARDEPMIT-LPRQFASREWYV 215 I+S+ S RD +IT +PR++A R YV Sbjct 166 IFSDISGDNQLAIVQVRD--LITAIPRKYAMRTVYV 199 >ref|YP_003713849.1| hypothetical protein XNC1_3721 [Xenorhabdus nematophila ATCC 19061] emb|CBJ91752.1| conserved hypothetical protein (similar to protein ygcI precursor of E. coli) [Xenorhabdus nematophila ATCC 19061] Length=254 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 63/169 (37%), Positives = 93/169 (55%), Gaps = 19/169 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M++YL+ RL G + +WG RPT +PTRS +LGLLGA LGI+RDD + L AL +S Sbjct 1 MKTYLVFRLYGALASWGVEAVGKDRPTASYPTRSAILGLLGAALGIRRDDEARLAALQQS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V A++ +R+S + +RDYHT L + + TI + R+ Sbjct 61 VNIAIK--------QRISGSLMRDYHTSQVPSQEKKRVHLTRKSELSDKSKLNTILSSRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLF 158 Y D + +A+ LT A ++ L A++KP +T LGR+SCPL P+ Sbjct 113 YRTDGIWIIAISLTEQAHFTLNTLHDALIKPVFTLSLGRKSCPLALPMM 161 >ref|YP_001342382.1| CRISPR-associated Cas5 family protein [Marinomonas sp. MWYL1] gb|ABR72447.1| CRISPR-associated protein Cas5 family [Marinomonas sp. MWYL1] Length=258 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/165 (42%), Positives = 93/165 (56%), Gaps = 23/165 (13%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ RL GPM +WGQP G R T PTRS +LGLLGA LGI+RDD L AL S Sbjct 1 MKDYLVFRLYGPMASWGQPAVGGDRATAIAPTRSAILGLLGAALGIKRDDAQQLDALHSS 60 Query 61 VQFAVRCDELILDDRRVSVTG-LRDYHTV-LGARED---YRGLKSH---------ETIQT 106 VQ A ++V+ T LRDYHT + +R + YR K+ TI + Sbjct 61 VQMAT---------KQVTPTSLLRDYHTSQVPSRNNKYVYRTRKNELLDEHKEKLNTILS 111 Query 107 WREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSC 151 R+Y CD + VA+ LT + + L++A++KP Y LGR+SC Sbjct 112 TRDYRCDGIWIVAVSLTQESLFSLERLKQALIKPVYVLSLGRKSC 156 >ref|YP_572293.1| CRISPR-associated Cas5e family protein [Chromohalobacter salexigens DSM 3043] gb|ABE57594.1| CRISPR-associated protein, Cas5e family [Chromohalobacter salexigens DSM 3043] Length=260 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 96/183 (52%), Gaps = 20/183 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M +L+ RL PM +WG+ RPT +P R +LGL+GA LGI+RDD L +S Sbjct 1 MTGHLVFRLYAPMASWGEAAVGEARPTATYPGRGAILGLIGAALGIRRDDDEGQLRLRQS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVL----GAREDYRGLKSH--------ETIQTWR 108 + AV+ +R LRDYHTV ++ +YR + TI + R Sbjct 61 LGIAVK--------QRSPGWLLRDYHTVQVPPSQSKVNYRSRREELSVPKDALNTILSSR 112 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQ 168 +Y CD + VAL L P A + EL+ A+ +PR+T YLGR++CPL PL +A + Sbjct 113 DYRCDGLWVVALRLMPDAVWTLDELKSALERPRFTLYLGRKACPLAAPLTPAIVEADHWR 172 Query 169 KAL 171 AL Sbjct 173 GAL 175 >ref|YP_387357.1| CRISPR-associated Cas5e family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gb|ABB37662.1| CRISPR-associated protein, Cas5e family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length=245 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 84/239 (35%), Positives = 114/239 (47%), Gaps = 19/239 (7%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL ++ GP+QA+G RPT PTRS +LG+L A +GI+RD+ + L L + Sbjct 1 MAQYLTFQIYGPLQAYGTVAVGEIRPTSTMPTRSAVLGILAAAIGIRRDEETRLAELRDG 60 Query 61 VQFAVRCD---ELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFT 117 + AVR D +++LD + G R L R D L TI + REYL DA FT Sbjct 61 YRVAVREDAPGKVMLDYHTIQTPGARGKRQ-LHCRRDELLLTEPNTILSRREYLMDALFT 119 Query 118 VALWLTPHAT-MVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEP 176 V LW H + E+ +A+ PR+T LGR+SCP P + PQ+A+ Y Sbjct 120 VCLWQANHTVPYSLQEIARALRSPRWTIGLGRKSCPPALPFAPKITDHTTPQEAVAAYPA 179 Query 177 ---VGGDIYSEE------SVTGHH--LKFTARDEPMITLPRQFAS---REWYVIKGGMD 221 V + S + G H + T RD P+ RQFA RE V K D Sbjct 180 DKLVSAGLRSPQVMRMLLDTEGPHTDTETTVRDVPLHHGRRQFAERKVRELLVRKAATD 238 >ref|NP_828715.1| hypothetical protein SAV_7539 [Streptomyces avermitilis MA-4680] dbj|BAC75250.1| putative CRISPR-associated protein [Streptomyces avermitilis MA-4680] Length=278 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 83/235 (35%), Positives = 113/235 (48%), Gaps = 30/235 (12%) Query 2 RSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSES 60 ++ L+LRL+GP+Q+WG+ + R T RFPTRSG++GLL A LG +R ++ L LS Sbjct 6 KAGLLLRLSGPLQSWGERSHFNERDTARFPTRSGVIGLLAAALGRRRGENIDDLARLS-- 63 Query 61 VQFAVRCDE--LILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTV 118 VR D ++L D GL TV A R + T+ T R YL DA FT+ Sbjct 64 --LTVRADRPGVLLRDLHTVGGGLPPKATVTTAEGKKRSGDT-TTLLTHRTYLADAVFTI 120 Query 119 ALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG------------TCQASD 166 AL P T +++ A+ P++ PYLGRRSCP PL LG A Sbjct 121 ALTAIPDNTGLLTRTATALSSPQWPPYLGRRSCPPEGPLLLGRFDDALHHLVHLPIAAPP 180 Query 167 PQKA----------LLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASR 211 PQ L++ P D ++ TG H D+P+ PRQ A R Sbjct 181 PQHGPHGIEFLSDHPLDHLPTPEDTCPPDAETGSHPSGEVNDQPLNFHPRQRAYR 235 >ref|YP_003469635.1| hypothetical protein XBJ1_3753 [Xenorhabdus bovienii SS-2004] emb|CBJ82871.1| Complete genome; segment 3/17 [Xenorhabdus bovienii SS-2004] Length=250 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 18/166 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M++YL+ RL G + +WG +RPT PTRS +LGLLGA LGI+RDD L L +S Sbjct 1 MQTYLVFRLYGVLASWGVEAVGESRPTSLHPTRSAILGLLGAALGIRRDDEMRLAELQQS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYR----------GLKSHETIQTWREY 110 V A++ + V+ + +RDYHT ++ + G TI + R+Y Sbjct 61 VNIAIK--------QIVAGSLMRDYHTSQVPSQNNKQQHFTRKSELGESELNTILSSRDY 112 Query 111 LCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHP 156 D + +A+ LT A + ++ L A+LKP +T LGR+SCPL P Sbjct 113 RSDGLWIIAISLTDQAHLTLTTLRDALLKPVFTLSLGRKSCPLCVP 158 >ref|ZP_08536246.1| hypothetical Protein MAMP_02709 [Methylophaga aminisulfidivorans MP] gb|EGL55715.1| hypothetical Protein MAMP_02709 [Methylophaga aminisulfidivorans MP] Length=265 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/183 (35%), Positives = 99/183 (54%), Gaps = 20/183 (10%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 YL+ RL G M +WG+ R + +P++S ++GLLGA LG++R+D + L+ + Q Sbjct 3 YLVFRLYGAMASWGEIAVGEMRHSSNYPSKSAIVGLLGAALGLRREDDDAHMNLTNTYQQ 62 Query 64 AVRCDELILDDRRVSVTGLRDYHTVLG----AREDYRG-----LKSHE---TIQTWREYL 111 AV+ +L R+ L+DYHT + YR + HE T+ + REY Sbjct 63 AVK----VLSAGRL----LKDYHTAQAPDSVGKFHYRTRRDEIVTGHERLGTVLSTREYY 114 Query 112 CDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKAL 171 DA VA+ A ++EL++A+ KP++ YLGR+SCPL PL T +A +AL Sbjct 115 VDAQAVVAIRANEQAKWALTELQQALCKPKFHLYLGRKSCPLAAPLDPKTIEADGFLQAL 174 Query 172 LNY 174 NY Sbjct 175 ENY 177 >ref|YP_004428011.1| CRISPR-associated protein Cas5 family [Alteromonas macleodii str. 'Deep ecotype'] gb|AEA99013.1| CRISPR-associated protein Cas5 family [Alteromonas macleodii str. 'Deep ecotype'] Length=243 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 77/189 (40%), Positives = 105/189 (55%), Gaps = 21/189 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ RL GPM +WG P G R T PTRS LLGLLGA LGI D+ L+AL +S Sbjct 1 MKEYLVFRLYGPMASWGVPAVGGDRATAIAPTRSALLGLLGAALGITTDNAEKLEALQQS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGL-----KSH------ETIQTWRE 109 V F V+ + V + LRDYHT E RG+ KS T+ + R+ Sbjct 61 VSFGVK--------QCVPSSILRDYHTAQVPSEK-RGVTHLTRKSELSEAKLNTVLSSRD 111 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQK 169 Y CD + VA+WL + + +S ++ A+ KP + YLGR+SCPL+ PL T + Q+ Sbjct 112 YRCDGVWVVAVWLRANPQVALSAIKAALEKPVFPLYLGRKSCPLSLPLSPKTIETETLQQ 171 Query 170 AL-LNYEPV 177 AL ++ PV Sbjct 172 ALDTDFPPV 180 >ref|YP_003797210.1| CRISPR-associated protein Cas5e [Candidatus Nitrospira defluvii] emb|CBK41285.1| CRISPR-associated protein Cas5e [Candidatus Nitrospira defluvii] Length=266 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 96/196 (48%), Gaps = 27/196 (13%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GP+ AWG TRP+ P++S ++GL+ A LG++R DT A +E+ Sbjct 1 MHDYLVFQLYGPIAAWGDIAVGETRPSTMTPSKSAVVGLVAAALGLRRPDT----AQTEA 56 Query 61 VQFAVRCDELILDDR-----RVSVTG--LRDYHTV-------------LGARED--YRGL 98 + D L L D +V G L DYHTV R D RG Sbjct 57 QRSEWELDHLALADGYGMAIKVDAVGVPLTDYHTVQVPSSGTGRNRQFFATRRDELNRGP 116 Query 99 KSH-ETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 KS TI + REY D + +ALW A + EL +A+L+PR+ YLGR+SCPL PL Sbjct 117 KSDLNTILSRREYRQDVYYAIALWARSQAPHTLRELRQALLEPRFVLYLGRKSCPLGLPL 176 Query 158 FLGTCQASDPQKALLN 173 Q + L N Sbjct 177 HPEIKQGETIEAVLAN 192 >ref|YP_797164.1| hypothetical protein LBL_0660 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gb|ABJ78231.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length=247 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ RL GP+ +WG RP+ FPT+S ++GL+ A G R + + L +S Sbjct 1 MKDYLVFRLYGPLVSWGNIAVGEYRPSDSFPTKSAIIGLISASFGFDRSEDGKISELVKS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSH----------ETIQTWREY 110 V FA + L+ + LRDYHT+ R L + ETI + R+Y Sbjct 61 VFFATKT----LNPGNL----LRDYHTIQSPGNVKRSLLTRKDELLDSEYVETILSSRDY 112 Query 111 LCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 DA + VAL A + E+ A+L P +TPYLGR+SC + P+ Sbjct 113 RVDAVYDVALSEKKRAPYSLKEIRNALLSPIHTPYLGRKSCSIALPM 159 >ref|YP_801661.1| hypothetical protein LBJ_2452 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gb|ABJ76903.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length=247 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ RL GP+ +WG RP+ FPT+S ++GL+ A G R + + L +S Sbjct 1 MKDYLVFRLYGPLVSWGNIAVGEYRPSDSFPTKSAIIGLISASFGFDRSEDGKISELVKS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSH----------ETIQTWREY 110 V FA + L+ + LRDYHT+ R L + ETI + R+Y Sbjct 61 VFFATKT----LNPGNL----LRDYHTIQSPGNVKRSLLTRKDELLDSEYVETILSSRDY 112 Query 111 LCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 DA + VAL A + E+ A+L P +TPYLGR+SC + P+ Sbjct 113 RVDAVYDVALSEKKRAPYSLKEIRNALLSPIHTPYLGRKSCSIALPM 159 >ref|YP_003133574.1| CRISPR-associated protein Cas5 [Saccharomonospora viridis DSM 43017] gb|ACU96747.1| CRISPR-associated protein Cas5 [Saccharomonospora viridis DSM 43017] Length=255 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 101/201 (50%), Gaps = 24/201 (11%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S L+LRLAGP+Q+WG+ + R T FPT SGLLGLL +G +R + SL+ L+ ++ Sbjct 2 SGLLLRLAGPLQSWGERSTFDVRDTAGFPTHSGLLGLLACVMGRRRGE--SLEDLA-ALT 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGA--------REDYRGLKSHE-TIQTWREYLCD 113 F +R D T + DY T GA D +G + + T+QTWREYL D Sbjct 59 FTIRVDR--------PGTRIIDYQTAGGALPPSMKVPTADGKGRPAGKGTVQTWREYLAD 110 Query 114 ASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLN 173 A F VA+ + V+ ++ A+ P + PYLGRRSCP PL L DP L Sbjct 111 AVFVVAVQ---GPSEVLDQVRHALRYPHWQPYLGRRSCPPDQPLLL-DVPVEDPVAELCT 166 Query 174 YEPVGGDIYSEESVTGHHLKF 194 P+ + +E F Sbjct 167 RVPLARRVGKDEETVPVDFIF 187 >ref|ZP_07284435.1| CRISPR-associated protein [Streptomyces sp. C] gb|EFL12804.1| CRISPR-associated protein [Streptomyces sp. C] Length=249 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/185 (40%), Positives = 94/185 (50%), Gaps = 20/185 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M S LILRLAGP+Q+WG R T PT+SG++GLL A LG RD T+ L L+ + Sbjct 1 MNSVLILRLAGPLQSWGASARFARRTTETAPTKSGVIGLLAAALG--RDRTADLTDLA-A 57 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 + FAVR + T LRD+ T A + + + E R YL DA F AL Sbjct 58 LHFAVRTGQ--------PGTRLRDFQTAHHA-DPGKAMPVSE-----RFYLADAVFVAAL 103 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 +I L A+ P Y PYLGRRSCP PL LG +DP +AL E D Sbjct 104 AGN---DTLIRTLHTALQAPVYLPYLGRRSCPPQGPLDLGVMDTNDPVQALTTQEWQASD 160 Query 181 IYSEE 185 Y ++ Sbjct 161 WYRQQ 165 >ref|ZP_01236523.1| hypothetical protein VAS14_16317 [Vibrio angustum S14] gb|EAS63363.1| hypothetical protein VAS14_16317 [Vibrio angustum S14] Length=252 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 102/182 (56%), Gaps = 20/182 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ RL G M +WGQPT G R TG P+RS LLGLLGA LGI+RD+ S+L L +S Sbjct 1 MQPYLVFRLYGAMASWGQPTVGGDRHTGVIPSRSALLGLLGAALGIKRDEQSTLTMLQKS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSH-----------ETIQTWRE 109 VQFA++ + + LRDYHT A ++ + H T+ + R+ Sbjct 61 VQFAIK--------QLAPSSLLRDYHTTQVA-ANHNNVHYHTRKQELDKGKLATVLSSRD 111 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQK 169 Y CD + VA+ LT A + +L++A+L P Y LGR+SCP PL ++ ++ Sbjct 112 YRCDGVWVVAVSLTNDAMFSLEQLQQALLTPAYPLCLGRKSCPPALPLMPTILESCSLKQ 171 Query 170 AL 171 AL Sbjct 172 AL 173 >ref|ZP_07730854.1| CRISPR system CASCADE complex protein CasD [Lactobacillus iners LEAF 3008A-a] gb|EFQ52096.1| CRISPR system CASCADE complex protein CasD [Lactobacillus iners LEAF 3008A-a] Length=241 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 95/175 (54%), Gaps = 19/175 (10%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 ++L+L GPMQ+WG + TR T +P++S ++G++ A LG +RD+ +Q L+E + FA Sbjct 4 ILLKLKGPMQSWGTSSHFETRTTDYYPSKSAVIGIIAASLGYKRDNDEKIQKLNE-LNFA 62 Query 65 VRCDELILDDRRVSVTGL--RDYHTVLGAR-EDYRGLKSHETIQTWREYLCDASFTVALW 121 +R D+ G+ +DYH+ + R +K ++ T R Y+ DA F VA+ Sbjct 63 IRIDQ----------PGVLAKDYHSAMSCRFPRVSDVKDNKKYVTNRYYMEDAIFVVAI- 111 Query 122 LTPHA-TMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 HA I + A+ P +TP++GRRSCPL F+ T D AL N E Sbjct 112 --SHADDQWIDSIYHALQNPYFTPFMGRRSCPLPAD-FIITVTNKDALDALQNLE 163 >ref|YP_015490.1| hypothetical protein PBPRC0036 [Photobacterium profundum SS9] emb|CAG17974.1| hypothetical protein [Photobacterium profundum SS9] Length=220 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 109/217 (50%), Gaps = 27/217 (12%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 LIL+ G + A+G TF+ R FPTRS ++G+L A LGI RD+ + + LS + A Sbjct 13 LILKTEG-LSAYGLQTFDVHRRVNHFPTRSAIVGILCAALGISRDEHAKIHELSTKLTIA 71 Query 65 VRCDELILDDRRVSVTG--LRDYHTVLGAREDYR---GLKSHETIQTWREYLCDASFTVA 119 V +V TG + DYHTV E++R G T T+REY CD+ + A Sbjct 72 V----------QVHHTGEKMMDYHTV----ENFRSPLGKIQKGTKPTYREYWCDSEHSFA 117 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGG 179 + I L +AV P +T + GR+ CPLT PL + S+P A L + G Sbjct 118 ISADE---QTIKLLIQAVKSPVFTIFQGRKCCPLTRPLLECVLEESNPSDA-LKHLGEKG 173 Query 180 DIYSEESVTGHHLKFTARDEPMIT-LPRQFASREWYV 215 I+S+ + H RD +IT + R++A R YV Sbjct 174 QIFSDIQGSNHVATLQVRD--LITPVARKYAIRTVYV 208 >ref|YP_002377730.1| CRISPR-associated protein Cas5 family [Cyanothece sp. PCC 7424] gb|ACK70862.1| CRISPR-associated protein Cas5 family [Cyanothece sp. PCC 7424] Length=215 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 96/160 (60%), Gaps = 14/160 (8%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M L+LRLAGP+Q+WG+ + R T PT+SG++GL+ A +GI RD+ L L++ Sbjct 1 MMKTLLLRLAGPLQSWGRGSRFDFRDTDTIPTKSGVIGLVAAAMGINRDNQVELAKLAQ- 59 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHET-IQTWREYLCDASFTVA 119 +R + + ++ V DYHTV+G + K H+ IQ++R+YLC+A F V Sbjct 60 ----LRMGVCVEKEGKLVV----DYHTVIGTI--HADGKPHKAPIQSYRQYLCNAEFLVG 109 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFL 159 L + + +++E+E + P++ +LGR++CP + P+F+ Sbjct 110 LESSEYH--LLNEIEHYLCFPKWELFLGRKACPPSKPIFV 147 >ref|ZP_07202114.1| CRISPR system CASCADE complex protein CasD [delta proteobacterium NaphS2] gb|EFK08634.1| CRISPR system CASCADE complex protein CasD [delta proteobacterium NaphS2] Length=283 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 89/184 (48%), Gaps = 20/184 (10%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 YL+ RL GPM +WG+ +R T R+P +S ++GLL A LGI+R++ + E Sbjct 20 YLLFRLYGPMASWGEIAVGESRHTARYPGKSAIIGLLSAALGIKRNNEEEQLLMQEGYAI 79 Query 64 AVRCDELILDDRRVSVTGLRDYHTVLGARE----DYRGLKSH--------ETIQTWREYL 111 AV+ T LRDYHT R YR + TI + REY Sbjct 80 AVQVFS--------HGTLLRDYHTAQAPRSVRNTSYRSRREELVSGKAYLGTILSSREYR 131 Query 112 CDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKAL 171 DA V++ P A + ++ + KP++ YLGR+SCPL PL+ +A D +A Sbjct 132 TDALALVSVRELPDAPHTLQTIKSHLKKPKFHLYLGRKSCPLAAPLYPQIIEAGDYHEAF 191 Query 172 LNYE 175 YE Sbjct 192 KAYE 195 >ref|YP_001536851.1| CRISPR-associated Cas5 family protein [Salinispora arenicola CNS-205] gb|ABV97860.1| CRISPR-associated protein Cas5 family [Salinispora arenicola CNS-205] Length=257 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 114/242 (47%), Gaps = 49/242 (20%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRLAGPMQ+WG + R TG PTRS ++G++ A G R + L L+ VQF Sbjct 4 LLLRLAGPMQSWGDHSTFSVRDTGTVPTRSAMIGIIAAAQGRHRGE--PLGDLAP-VQFT 60 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHE---------TIQTWREYLCDAS 115 VR D T + D+HTV G R + + E TI + R YL DA Sbjct 61 VRVDR--------PGTVMSDFHTVGGGAPPERTVPTAEGKRRTAGAGTIVSRRFYLADAV 112 Query 116 FTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKAL---- 171 FTVA+ ++ ++ A+ P + PYLGRRSCP+ HP FL + DP L Sbjct 113 FTVAVT---GPDDLVGQIHTALNNPVWGPYLGRRSCPVAHP-FLMSGPIPDPVGRLEHLP 168 Query 172 LNYEPVGGDIYSEESV-----------TGHHLKFTARDEPMITLP-------RQFASREW 213 LN GD EE+V G + T D PM +P R++ +R+ Sbjct 169 LNRRRPPGD---EETVRVDFVTGAPHGDGSISRMTLNDVPMEPVPGSPDPRRRRYLTRQV 225 Query 214 YV 215 YV Sbjct 226 YV 227 >ref|ZP_08539899.1| CRISPR system CASCADE complex protein CasD [Oribacterium sp. oral taxon 108 str. F0425] gb|EGL38219.1| CRISPR system CASCADE complex protein CasD [Oribacterium sp. oral taxon 108 str. F0425] Length=187 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/158 (37%), Positives = 91/158 (57%), Gaps = 15/158 (9%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 ++L+ GP+Q++G + TR T +P++S ++GLL ACLG +RD+ +L+ LS+ ++FA Sbjct 4 ILLKFTGPLQSYGTSSHFETRYTDYYPSKSAVIGLLAACLGYRRDEAENLRELSK-LKFA 62 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D+ T LRDYH E +G++S +T T R YL DA F VAL Sbjct 63 VRIDQ--------DGTLLRDYHIARSYNE--KGVES-KTYVTNRYYLEDALFVVAL---S 108 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTC 162 +I L +A+ P + P++GRRS P+ FLG Sbjct 109 GMDELIDTLIEAIKTPYFQPFMGRRSLPVPVDFFLGVS 146 >ref|ZP_07307361.1| CRISPR-associated protein [Streptomyces viridochromogenes DSM 40736] gb|EFL35730.1| CRISPR-associated protein [Streptomyces viridochromogenes DSM 40736] Length=257 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 18/156 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRLAGP+Q+WG + R T PT+SG++GLL A G++R D ++L L+ +++F Sbjct 7 LVLRLAGPLQSWGASSRFTRRTTESAPTKSGVVGLLAAAAGVERGDDTALAPLA-ALRFG 65 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D+ T +RD+HT + G+ + R YL DA F A+ Sbjct 66 VRIDQ--------PGTRIRDFHTA------HHGVSGVSMPLSERFYLADAVFVAAVE--- 108 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 +++ L A+L P Y PYLGRRSCP + P+ LG Sbjct 109 GDQTLLTGLRDALLAPAYPPYLGRRSCPPSEPVDLG 144 >ref|YP_003133262.1| CRISPR-associated protein Cas5 [Saccharomonospora viridis DSM 43017] gb|ACU96435.1| CRISPR-associated protein Cas5 [Saccharomonospora viridis DSM 43017] Length=236 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 75/217 (34%), Positives = 108/217 (49%), Gaps = 22/217 (10%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+L L GPMQAWG + R T +PTRSG++G++ A LG Q D SL LS ++F Sbjct 4 LVLHLDGPMQAWGHASQWDHRDTLDYPTRSGVIGMIAAALGKQWGD--SLDDLS-PLRFT 60 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGARE----DYRGLKSHETIQTWREYLCDASFTVAL 120 +R D RR+ DYHT G E +G + + R Y+ DA++TVA+ Sbjct 61 IRIDR---PGRRIV-----DYHTAGGGYEVGIARVKGGNRAHAVLSDRFYMSDAAYTVAI 112 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNY--EPVG 178 ++ ++ A+ P + P+LGRRSCP P LG DP + L + +P Sbjct 113 ---TGPDTLLYRVDDALRAPVFGPFLGRRSCPPAGPWHLG-LHDGDPLRTLPLHRDKPRD 168 Query 179 GDIYSEESVTGHHLKF-TARDEPMITLPRQFASREWY 214 GD + E V+ H T R + +T P +F R Y Sbjct 169 GDTVAVEFVSDHETHGPTDRVDTTLTDPHEFGPRRSY 205 >dbj|BAE95441.1| CRISPR-associated protein [Streptomyces kanamyceticus] Length=280 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 88/168 (52%), Gaps = 20/168 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRL+GP+Q+WG+ + R T RFPTRSG++G+L A LG +R E V Sbjct 14 LLLRLSGPLQSWGERSHFNERDTARFPTRSGIIGMLAAALGRRR---------GEPVDDL 64 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHE---------TIQTWREYLCDAS 115 R + DR + LRD HTV G + + E T+ T R YL DA+ Sbjct 65 ARLSLTVRTDRPGIL--LRDLHTVGGGLPAKATVTTAEGKKRPGTTGTLLTHRTYLADAA 122 Query 116 FTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ 163 FT+AL TP ++ + +A+ P + +LGRRSCP PL LG + Sbjct 123 FTIALTSTPDDRPLLDQAAQALNTPCWPLFLGRRSCPPEGPLLLGASE 170 >ref|ZP_06560097.1| CRISPR system CASCADE complex protein CasD [Megasphaera genomosp. type_1 str. 28L] gb|EFD93802.1| CRISPR system CASCADE complex protein CasD [Megasphaera genomosp. type_1 str. 28L] Length=250 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 13/159 (8%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 ++L+LAGP+Q+WG R T +P++S +LGLL +GI+R+DTS + ++ FA Sbjct 4 ILLKLAGPLQSWGTRANFEIRHTDYYPSKSAVLGLLLGAMGIRREDTSETIDVFNALDFA 63 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 +R ++ L+DYH + L +T T R YL DA F AL Sbjct 64 IRVEQ--------PGELLKDYHIARSYESNGSLL---QTYVTERYYLEDAVFLAALGSEN 112 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ 163 A VI+E+E A+ P + P++GRRSCP+ FLG + Sbjct 113 GA--VIAEIEHALKYPHFQPFMGRRSCPVPADFFLGVFE 149 >ref|YP_425263.1| CRISPR-associated Cas5e family protein [Rhodospirillum rubrum ATCC 11170] gb|ABC20976.1| CRISPR-associated protein, Cas5e family [Rhodospirillum rubrum ATCC 11170] Length=261 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 102/234 (43%), Gaps = 32/234 (13%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 +R +L+ RL GPM AWG R T P +S +LGLL A LGI R D ++ +AL Sbjct 3 VRDFLVFRLVGPMAAWGDIAVGERRGTWDVPAKSAILGLLAAGLGIDRADRTAHEALDRG 62 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV----------LGAREDYRGLKSHETIQTWREY 110 + FAVR D LRDYHT R D T+ + R Y Sbjct 63 LGFAVRQDR--------PGRLLRDYHTAQAPKARKNARWSTRRDELNDDDLNTVLSDRLY 114 Query 111 LCDASFTVALWLTPHATM-VISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQK 169 +A T A+W + +L +A+L+PR+TPYLGR++CPL P QA Sbjct 115 RTNAIATPAIWRRQGTEGPTLDQLTQALLRPRFTPYLGRKACPLGWPPRPRLLQADGLLA 174 Query 170 ALLNYEPVGGDIYSE--ESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMD 221 A Y+ D + ++ G T R P+ W+ I G+D Sbjct 175 AFDAYDSAEWDAARQFHKAYPGGWPGDTDRPTPV-----------WFEIAAGLD 217 >ref|ZP_01158691.1| hypothetical protein SKA34_08673 [Photobacterium sp. SKA34] gb|EAR57647.1| hypothetical protein SKA34_08673 [Photobacterium sp. SKA34] Length=252 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 99/182 (54%), Gaps = 20/182 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ RL G M +WGQP R TG P+RS LLGLLGA LGI+RD+ S+L L +S Sbjct 1 MQPYLVFRLYGAMASWGQPAVGCDRHTGVIPSRSALLGLLGAALGIKRDEQSTLTMLQKS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSH-----------ETIQTWRE 109 VQFA++ + LRDYHT A ++ + H T+ + R+ Sbjct 61 VQFAIK--------QSAPSLLLRDYHTTQVA-ANHNNVHYHTRKQELDKGKLATVLSSRD 111 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQK 169 Y CD + VA+ LT A + +L++A+L P Y LGR+SCP PL ++ ++ Sbjct 112 YRCDGVWVVAVSLTNDAMFSLEQLQQALLTPAYPLCLGRKSCPPALPLMPTILESCSLKQ 171 Query 170 AL 171 AL Sbjct 172 AL 173 >ref|ZP_04705535.1| hypothetical protein SalbJ_26494 [Streptomyces albus J1074] ref|ZP_06594233.1| crispr-associated protein [Streptomyces albus J1074] gb|EFE84694.1| crispr-associated protein [Streptomyces albus J1074] Length=274 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 83/237 (35%), Positives = 114/237 (48%), Gaps = 32/237 (13%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSESV 61 S L+LRLAGP+Q+WG + R T RFPTRSG++G+L A LG +R+ L ALS +V Sbjct 7 SGLLLRLAGPLQSWGTHSKYLWRDTARFPTRSGVVGMLAAGLGREREAPVDDLTALSMTV 66 Query 62 QFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALW 121 + V ++L D GL TV+ RG + T+ + R+YL DA FTVA Sbjct 67 R--VDRPGVVLTDFHTVGGGLPADETVITVDGKRRG-EGKGTLVSKRQYLADAVFTVA-- 121 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNY-----EP 176 LT ++ A+ P + +LGRRSCP P+ LGT + DP L+ P Sbjct 122 LTSDDAELLHRCAAALRDPHWPLFLGRRSCPPEGPILLGTVE--DPLDHLVRLPLAARRP 179 Query 177 VGG----DIYSEESV-------------TGHHLKFTARDEPMITLP--RQFASREWY 214 GG + YS+ + G H DEP+ P RQ+ R Y Sbjct 180 RGGPQPTEFYSDRPLGVLPVVSDAPDREDGDHHSGEVADEPLSFAPLGRQYRPRPLY 236 >ref|YP_250425.1| hypothetical protein jk0645 [Corynebacterium jeikeium K411] ref|ZP_05846113.1| CRISPR-associated protein [Corynebacterium jeikeium ATCC 43734] emb|CAI36807.1| hypothetical protein jk0645 [Corynebacterium jeikeium K411] gb|EEW16908.1| CRISPR-associated protein [Corynebacterium jeikeium ATCC 43734] Length=235 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 90/166 (54%), Gaps = 19/166 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSE 59 M S L+LRL+GPMQ+WG + R T + PT+SG+LGLL A G +R DD L AL+ Sbjct 1 MPSTLLLRLSGPMQSWGVSSRFKQRATEQVPTKSGVLGLLAAAQGRRRTDDLQDLAALT- 59 Query 60 SVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVA 119 FAVR D+ + LRDY T A+ + K + + T R YL DA F A Sbjct 60 ---FAVRVDQ--------PGSLLRDYQT---AQPWQKRPKDNANLVT-RYYLEDAVFVAA 104 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 + I EL AV +PR+ +LGRRSCP L+LGT + S Sbjct 105 --VESDNDSFIDELASAVQRPRFPLFLGRRSCPAPPNLYLGTFRGS 148 >ref|ZP_03915771.1| CRISPR-associated protein [Anaerococcus lactolyticus ATCC 51172] gb|EEI86600.1| CRISPR-associated protein [Anaerococcus lactolyticus ATCC 51172] Length=244 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 99/183 (54%), Gaps = 17/183 (9%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 ++L+L GPMQ+WG + TR + +P++SG++G++ A G +RD+ +Q L++ + FA Sbjct 7 ILLKLTGPMQSWGTSSRFETRTSDYYPSKSGVIGIIAASFGYERDEDEKIQKLND-LDFA 65 Query 65 VRCD-ELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLT 123 VR D E +L +DYH AR+ + T T R Y+ DA F VA ++ Sbjct 66 VRVDQEGVLK---------KDYHI---ARKVKPNGELERTYVTNRYYMEDAVFVVA--IS 111 Query 124 PHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYS 183 + E+ + + P + P++GRRSCPL LGT + P +AL N + D + Sbjct 112 HEDDKWMEEILQGLKYPYFQPFMGRRSCPLPARFILGTNEEG-PIEALENLDWQAADWFK 170 Query 184 EES 186 +++ Sbjct 171 KKN 173 >ref|ZP_08047462.1| CRISPR-associated protein Cas5 [Streptococcus sp. C150] gb|EFX55037.1| CRISPR-associated protein Cas5 [Streptococcus sp. C150] Length=241 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 14/161 (8%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 ++L+ AGP+Q+WG + TR T +P++S ++GLL A LG +RD+ +Q L+E + FA Sbjct 4 ILLKFAGPLQSWGTSSHFETRHTDFYPSKSAVIGLLAASLGYRRDEDEKIQKLNE-LDFA 62 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D+ LRD+H E +G K T R YL DA F VAL T Sbjct 63 VRVDQ--------QGNLLRDFHIAQKYTE--KG-KFDRNYVTNRYYLEDAVFVVALSHTD 111 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 + + I ++ A+ P + P++GRR+ P+ LG + Sbjct 112 DSFIDI--IKVALKNPYFQPFMGRRALPIISDFILGETDVN 150 >ref|ZP_07735177.1| CRISPR system CASCADE complex protein CasD [Lactobacillus iners LEAF 2053A-b] gb|EFQ47702.1| CRISPR system CASCADE complex protein CasD [Lactobacillus iners LEAF 2053A-b] Length=245 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 23/179 (12%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 ++L+L GPMQ+WG + TR T +P++S ++G++ A LG +RD+ +Q L+E + FA Sbjct 4 ILLKLKGPMQSWGTSSHFETRTTDYYPSKSAVIGIIAASLGYKRDNDEKIQKLNE-LNFA 62 Query 65 VRCDELILDDRRVSVTGL--RDYHTV----LGAREDYR-GLKSHETIQTWREYLCDASFT 117 +R D+ G+ +DYH + + Y+ + T R Y+ DA F Sbjct 63 IRIDQ----------PGVLSKDYHIATKYKVNIDKKYKISVAFDRNYVTNRYYMEDAIFV 112 Query 118 VALWLTPHA-TMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 VA+ HA I + A+ P +TP++GRRSCPL F+ T D AL N E Sbjct 113 VAI---SHADDQWIDSIYHALQNPYFTPFMGRRSCPLPAD-FIITVTNKDALDALKNLE 167 >emb|CAJ88800.1| conserved hypothetical protein [Streptomyces ambofaciens ATCC 23877] Length=247 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 18/169 (10%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRLAGP+Q+WG + R T PT+SG++GLL A GI+R D + L L+ +++F Sbjct 7 LVLRLAGPLQSWGASSRFTRRTTESAPTKSGIVGLLAAAAGIERGDDTRLAPLA-ALRFG 65 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D+ T +RD+HT G+ + R YL DA F A+ Sbjct 66 VRIDQ--------PGTRIRDFHTA------RHGVTGASMPLSERFYLADAVFVAAV---E 108 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLN 173 +I+ L A+ P Y P+LGRRSCP P+ LG + + + AL + Sbjct 109 GDQRLIAGLHDALRSPVYAPFLGRRSCPPAEPVDLGRYEETTLEDALTS 157 >ref|ZP_07733767.1| CRISPR system CASCADE complex protein CasD [Lactobacillus iners LEAF 2052A-d] ref|ZP_08276569.1| CRISPR system CASCADE complex protein CasD [Lactobacillus iners SPIN 1401G] gb|EFQ49119.1| CRISPR system CASCADE complex protein CasD [Lactobacillus iners LEAF 2052A-d] gb|EGG33807.1| CRISPR system CASCADE complex protein CasD [Lactobacillus iners SPIN 1401G] Length=245 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 23/179 (12%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 ++L+L GPMQ+WG + TR T +P++S ++G++ A G +RD+ +Q L+E + FA Sbjct 4 ILLKLKGPMQSWGTSSHFETRTTDYYPSKSAVIGIIAASFGYKRDNDEKIQKLNE-LNFA 62 Query 65 VRCDELILDDRRVSVTGL--RDYHTV----LGAREDYR-GLKSHETIQTWREYLCDASFT 117 +R D+ G+ +DYH + + Y+ + T R Y+ DA F Sbjct 63 IRIDQ----------PGVLAKDYHIATKYKVNIDKKYKISVAFDRNYVTNRYYMEDAIFV 112 Query 118 VALWLTPHA-TMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 VA+ HA I + A+ P +TP++GRRSCPL F+ T D AL N E Sbjct 113 VAI---SHADDQWIDSIYHALQNPYFTPFMGRRSCPLPAD-FIITVTNKDALDALQNLE 167 >ref|ZP_03833700.1| hypothetical protein PcarcW_20953 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length=244 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 89/244 (36%), Positives = 120/244 (49%), Gaps = 36/244 (14%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M +YL+ ++ P+ +WG+ R T P+RS LLGLL A LGI+RDD ++L ++ Sbjct 1 MDNYLVFQIYAPLVSWGEVAVGEVRHTSTVPSRSALLGLLAAALGIRRDDRAALTVFNQH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYR-------------GLKSHETIQTW 107 AVR L DR T L DYHTV +E+ + +S ET+ T Sbjct 61 YHVAVRP----LSDRE---TWLNDYHTVQMPKENRKVPRYTRRDELRSEAGQSLETMLTS 113 Query 108 REYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHP----LFLGTC- 162 REY CDA + +A+ TP A +S L A+L P +T Y GR+SCP P LF GT Sbjct 114 REYRCDAYYHIAISATPDAPYSLSALRDALLSPVFTLYFGRKSCPPALPLAPHLFAGTLA 173 Query 163 ---QASDPQKAL--LNYEPVG---GDIYSE-ESVTG--HHLKFTARDEPMITLPRQFASR 211 Q + AL L E +G G Y E E+ TG + + D+P QF SR Sbjct 174 EVWQLAKQTPALNELALEMIGRAEGVCYWEQETDTGLTEQYRVSRNDQPADRRRWQFTSR 233 Query 212 EWYV 215 YV Sbjct 234 VQYV 237 >gb|EDJ48907.1| hypothetical protein GOS_1686317 [marine metagenome] Length=364 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 85/165 (51%), Gaps = 14/165 (8%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S L+L LAGP QAWG RPT PT SG++G+L A G+ R +S + E ++ Sbjct 109 SSLLLCLAGPTQAWGIEATRDYRPTRAHPTLSGIIGMLSAAQGLPRKHATSW--VDEHLE 166 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVL--GAREDYRGLKSHETIQTWREYLCDASFTVAL 120 +VR D+ T RDYHT G Y G + +TI + REYL DA F A Sbjct 167 LSVRVDK--------PGTITRDYHTANTDGDMPKYPGQRHTDTIVSEREYLDDARFIAA- 217 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 LT T +I+ L A+ P + P LGRR+C PL+LG + Sbjct 218 -LTHPNTDLITHLADAIQHPTWAPSLGRRACTPALPLYLGVTHQT 261 >ref|ZP_07903531.1| CRISPR-associated protein [Eubacterium saburreum DSM 3986] gb|EFU77569.1| CRISPR-associated protein [Eubacterium saburreum DSM 3986] Length=241 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 15/160 (9%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 ++L+ AGPMQ+WG + TR T +P++S ++GL+GA LGI+RDD S + + ++FA Sbjct 4 ILLKFAGPMQSWGTDSHFETRHTDLYPSKSAVIGLIGAALGIRRDDKSISEL--DVLKFA 61 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR DR S+ L+DYH AR+ + T R YL DA F VA ++ Sbjct 62 VRV------DREGSL--LKDYHI---ARKYKPTGELERNYVTERYYLEDAVFVVA--ISH 108 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQA 164 I ++ +A+ +P + +LGRRS P++ LG A Sbjct 109 EDDNFIEKIYEALKRPYFQMFLGRRSVPVSADFILGIFDA 148 >ref|ZP_06414951.1| CRISPR-associated protein Cas5 family [Frankia sp. EUN1f] gb|EFC82260.1| CRISPR-associated protein Cas5 family [Frankia sp. EUN1f] Length=257 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 93/184 (50%), Gaps = 24/184 (13%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S L+LRLAGP+Q+WG+ + R T FPTRSGL+GL A +G+ R + + + ++ Sbjct 2 SGLVLRLAGPLQSWGEHSVFAVRDTAGFPTRSGLIGLFAAAMGLSRGEPLT---RFDGLR 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHE---------TIQTWREYLCD 113 VR D L D+HTV G +R + + + TI T R YL D Sbjct 59 LTVRVD--------APGVLLTDFHTVGGNLPAHRTVPTADGKHRSGDTGTIVTRRRYLSD 110 Query 114 ASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLN 173 A FTVA+ ++ + +A+ +P + PYLGRRSCP P L +DP+ L Sbjct 111 AVFTVAVT---GPDDIVHTVGQALERPVWQPYLGRRSCPPDEPFVL-RRDTTDPEGDLRA 166 Query 174 YEPV 177 P+ Sbjct 167 RVPL 170 >ref|YP_001275017.1| CRISPR-associated Cas5 family protein [Roseiflexus sp. RS-1] gb|ABQ89067.1| CRISPR-associated protein, Cas5e family [Roseiflexus sp. RS-1] Length=262 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 96/202 (47%), Gaps = 45/202 (22%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L LRL GP+Q+WG G R T PT+SG++GLLG LG++RDD + L+ LS++++ Sbjct 4 LFLRLEGPLQSWGLRARWGERDTTDAPTKSGVIGLLGCALGLRRDD-ARLRDLSDNLRMG 62 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAR--------------EDYRG------------- 97 VR D + +RDYHT G R E Y G Sbjct 63 VRVD--------LPGILMRDYHTTGGGRYSTIASTGGPRYHDEPYIGGVLSAEVTKGRIK 114 Query 98 ------LKSHETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSC 151 ET + R YL DASF VAL +P I EL A+ P + +LGR++C Sbjct 115 VKINQKTGEPETDVSERYYLADASFLVALQGSPD---YIGELATAIQSPVWPLFLGRKAC 171 Query 152 PLTHPLFLGTCQASDPQKALLN 173 + P+F GT Q + AL N Sbjct 172 VPSTPIFAGTGQFDILEDALKN 193 >ref|YP_004202416.1| CRISPR-associated protein Cas5 [Thermus scotoductus SA-01] gb|ADW21867.1| crispr-associated protein Cas5 [Thermus scotoductus SA-01] Length=224 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 92/175 (52%), Gaps = 25/175 (14%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSESVQF 63 L+LRL GPMQ+WG + R T +PT+SG+LGLL A LG R +D S L AL + Sbjct 4 LLLRLQGPMQSWGTRSRFDHRDTWPYPTKSGVLGLLAAALGRDREEDISDLAAL----RM 59 Query 64 AVRCDELILDDRRVSVTGLRDYHT---VLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 VR D R V + DY T ++ A LK+ +Q+WR YL DA+F V L Sbjct 60 GVRVD-------RKGVLRV-DYQTAQEIIAA-----SLKAKVNVQSWRHYLSDAAFLVGL 106 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDP-QKALLNY 174 ++ E +A+L PRY YLGR+ + P++L +P + AL NY Sbjct 107 ---EGPAFLLEEAHQALLNPRYVLYLGRKGYVPSPPVYLADGVREEPLEVALRNY 158 >ref|YP_565318.1| CRISPR-associated Cas5e family protein [Methanococcoides burtonii DSM 6242] gb|ABE51568.1| CRISPR-associated protein, CT1976-like [Methanococcoides burtonii DSM 6242] Length=244 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 95/194 (48%), Gaps = 28/194 (14%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YLI RL GPM +WG RPT P++S + GL+ A LGI+RD+ LS + Sbjct 1 MKEYLIFRLYGPMASWGDIAVGQHRPTYDHPSKSAIFGLIAAALGIRRDEEERHLELSNA 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHT-------------VLGAREDYRGLKSHE--TIQ 105 + LI ++ LRDYHT R+D + E T+ Sbjct 61 YSYGT----LINSAGKL----LRDYHTSQVPSAGTGRNRKTFATRKDELAVPKEELNTVL 112 Query 106 TWREYLCDASFTVALWL---TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTC 162 + R+Y CD +TV L TP ++ + L ++ +P + YLGR+SCPL P+ Sbjct 113 STRDYYCDGVYTVILSCKTDTPPYSLEL--LGNSLKEPSFCLYLGRKSCPLALPINPKIV 170 Query 163 QASDPQKALLNYEP 176 AS+ ++AL + +P Sbjct 171 SASNIKEALQSVDP 184 >ref|ZP_07093803.1| CRISPR system CASCADE complex protein CasD [Peptoniphilus sp. oral taxon 836 str. F0141] gb|EFK39564.1| CRISPR system CASCADE complex protein CasD [Peptoniphilus sp. oral taxon 836 str. F0141] Length=235 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 100/173 (57%), Gaps = 20/173 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 MR+ ++L+LAGP+Q+WG + TR T +P++SG+LG++ LG++RDD ++++ L+E Sbjct 1 MRT-ILLKLAGPLQSWGTNSHFETRHTDLYPSKSGILGIVAGSLGLKRDDNTNIKKLNE- 58 Query 61 VQFAVRCDE--LILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTV 118 + FA R D+ +IL D ++S + G E R S+ R YL DA F V Sbjct 59 LLFATRIDQEGMILRDFQISAK-----YKANGTFE--RNYVSN------RYYLSDAIFIV 105 Query 119 ALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKAL 171 + L+ I ++ +A+ KP + ++GRRS P+ + F+ + + +P K L Sbjct 106 S--LSHEDKEYIQKIYQALKKPYFQQFMGRRSLPVNYD-FIISVEDDEPIKLL 155 >ref|ZP_07739088.1| CRISPR-associated protein, Cas5e family [Aminomonas paucivorans DSM 12260] gb|EFQ22977.1| CRISPR-associated protein, Cas5e family [Aminomonas paucivorans DSM 12260] Length=236 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/178 (40%), Positives = 97/178 (54%), Gaps = 23/178 (12%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRL PMQ+WG + G R TGR P++SG++GLL A LG RD L L+ S+ Sbjct 4 LLLRLGAPMQSWGVHSAFGIRDTGREPSKSGVVGLLAAALG--RDRHDPLDDLA-SLVLG 60 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAR--------EDYRGLKSHETIQTWREYLCDASF 116 VR DR S+ +RD+ T G + G K+ +T+ + R YL DA F Sbjct 61 VRV------DREGSL--MRDFQTAGGGQFCGSPYGVRKANG-KAGDTVVSPRWYLADALF 111 Query 117 TVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNY 174 VAL A + LE+A+L+PRY YLGRRS P T PL LG + ++AL +Y Sbjct 112 LVALGGEDPA--FLKSLEEALLRPRYPLYLGRRSYPPTFPLVLGVVSEAA-EEALRSY 166 >ref|YP_003298568.1| CRISPR-associated Cas5 family protein [Thermomonospora curvata DSM 43183] gb|ACY96530.1| CRISPR-associated protein Cas5 family [Thermomonospora curvata DSM 43183] Length=273 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 25/179 (13%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSESVQF 63 L+L L+GP+Q+WG+ + R T PTRSGL+G++ A G +R + + L+AL +F Sbjct 9 LLLHLSGPLQSWGERSRFNQRDTATAPTRSGLIGMIAAAFGRRRTEPVTDLRAL----RF 64 Query 64 AVRCDELILDDRRVSVTGLRDYHTVLGA---------REDYRGLKSHETIQTWREYLCDA 114 VR D T LRD+HTV G E R T+ + R YL DA Sbjct 65 TVRIDR--------PGTLLRDFHTVGGGMPRDLTVITAEGKRRAADTATVTSDRYYLQDA 116 Query 115 SFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLN 173 +FTVA +T ++ +A+ PR+ YLGRRSCP PL L T +DP AL++ Sbjct 117 AFTVA--VTADDPALLDRCAQALRAPRWPLYLGRRSCPPNAPLLL-TVLRTDPVTALID 172 >ref|YP_001234931.1| CRISPR-associated Cas5 family protein [Acidiphilium cryptum JF-5] gb|ABQ31012.1| CRISPR-associated protein, Cas5e family [Acidiphilium cryptum JF-5] Length=249 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 93/211 (44%), Gaps = 21/211 (9%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+S+L L P+ ++G R + P RS +LGL+GACLGI+R+D AL Sbjct 1 MKSFLTFTLFAPIASFGAIAVGERRESWSRPARSAVLGLVGACLGIEREDAEEQAALERE 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV----------LGAREDYRGLKSHETIQTWREY 110 FA+ C S L D+HT+ R + + +TI T R+Y Sbjct 61 FGFALLCG--------TSGGSLADFHTLQVGRPARGQTFRTRAEELNSNTVDTILTRRDY 112 Query 111 LCDASFTVALWLTPHAT--MVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQ 168 A ALW+ + +L A+ +P +TPYLGRR+CPL PL A P Sbjct 113 RVSAWHLAALWVRSEVDPRWALEDLADAMKQPAFTPYLGRRACPLGLPLAPQIIDADSPA 172 Query 169 KALLNYEPVGGDIYSEESVTGH-HLKFTARD 198 AL G + S+ G F ARD Sbjct 173 SALDRRWASGPEAEFRPSLAGTIQDLFVARD 203 >ref|YP_151962.1| hypothetical protein SPA2796 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] ref|YP_002143452.1| hypothetical protein SSPA2607 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gb|AAV78650.1| hypothetical protein SPA2796 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] emb|CAR60846.1| hypothetical protein SSPA2607 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length=241 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/169 (41%), Positives = 91/169 (53%), Gaps = 19/169 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ +L P+ +WG+ R + PTRS LLGLL A LGI+RD+ + L + Sbjct 1 MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARED--YR--------GLKSHE--TIQTWR 108 AV L DR LRDYHTV RE+ YR L S E T+ + R Sbjct 61 YHLAVHA--LASQDR-----WLRDYHTVSAPRENKKYRYYTRRDELTLASDEVGTLISQR 113 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 EY CD + VA+ TP A +SEL +A+L P + YLGR+SCPL PL Sbjct 114 EYRCDGYWHVAISATPDAPYSLSELREALLTPHFPLYLGRKSCPLALPL 162 >ref|NP_457329.1| hypothetical protein STY3067 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] ref|NP_806538.1| hypothetical protein t2841 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] ref|ZP_03346662.1| hypothetical protein Salmoneentericaenterica_13258 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] 8 more sequence titles Length=241 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/169 (41%), Positives = 91/169 (53%), Gaps = 19/169 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ +L P+ +WG+ R + PTRS LLGLL A LGI+RD+ + L + Sbjct 1 MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARED--YR--------GLKSHE--TIQTWR 108 AV L DR LRDYHTV RE+ YR L S E T+ + R Sbjct 61 YHLAVHA--LASQDR-----WLRDYHTVSAPRENKKYRYYTRRDELTLASDEVGTLISQR 113 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 EY CD + VA+ TP A +SEL +A+L P + YLGR+SCPL PL Sbjct 114 EYRCDGYWHVAISATPDAPYSLSELREALLTPHFPLYLGRKSCPLALPL 162 >ref|ZP_02092017.1| hypothetical protein FAEPRAM212_02306 [Faecalibacterium prausnitzii M21/2] gb|EDP20978.1| hypothetical protein FAEPRAM212_02306 [Faecalibacterium prausnitzii M21/2] emb|CBL01827.1| CRISPR-associated protein, Cas5e family [Faecalibacterium prausnitzii SL3/3] Length=220 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 20/172 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRLA P+QAWG + TR TGR PT+SG++GLL A LG++RD++ +L L+ ++F Sbjct 4 LLLRLAAPLQAWGADSKFETRKTGREPTKSGVIGLLAAALGLRRDESEALTRLT-GLRFG 62 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR + L DYHT E + T+R YL DA F + T Sbjct 63 VRVER--------EGQLLVDYHTAKTQDE-------KTSYVTYRHYLQDAVFLAGIEST- 106 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEP 176 T ++ +L++A+L P + YLGRR CP T PL LG C S + +L EP Sbjct 107 -DTALLQQLQQALLHPAFPLYLGRRCCPPTLPLCLGVCPGS--LQEVLQAEP 155 >ref|ZP_06827673.1| CRISPR-associated protein [Streptomyces sp. SPB74] gb|EDY43247.1| CRISPR-associated protein [Streptomyces sp. SPB74] Length=299 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 90/167 (53%), Gaps = 18/167 (10%) Query 5 LILRLAGPMQAWGQPT-FEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 L++ LAGP+Q+WG+ + F R TG PTRS L+GL A LG RDD +L + Sbjct 30 LLMHLAGPLQSWGERSRFPSQRDTGVTPTRSALIGLFAAALGRGRDD--ALTGPNPDTDG 87 Query 64 AVRCDELILDDRRVSVTGLRDYHTVLG----------AREDYRGLKSHETIQTWREYLCD 113 +R ++ R T LRD+HTV G A YR K + T R YL D Sbjct 88 DLRTLSFLVRTDRPG-TRLRDFHTVGGGLPRTKTVVTAEGTYR--KGANALVTTRHYLQD 144 Query 114 ASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 A+FTVA+ T T ++ ++A+ +PR+ YLGRRSCP T + LG Sbjct 145 AAFTVAVTAT--DTALLERCDEALRRPRWPLYLGRRSCPPTGRVRLG 189 >ref|ZP_07887576.1| CRISPR-associated protein cas5 [Streptococcus sanguinis ATCC 49296] gb|EFU63291.1| CRISPR-associated protein cas5 [Streptococcus sanguinis ATCC 49296] Length=242 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 14/159 (8%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 ++L+ AGP+Q+WG + TR T +P++S ++GL+ + LG +RDD + L+E + FA Sbjct 7 ILLKFAGPLQSWGTSSHFETRHTDFYPSKSSVIGLIASSLGYRRDDDEKIVRLNE-LDFA 65 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D+ LRD+H E +G K T R YL DA F VA L+ Sbjct 66 VRVDQ--------QGNLLRDFHIAQKYTE--KG-KFERNYVTNRYYLEDAVFVVA--LSH 112 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ 163 + + + +A+ P + P++GRR+ PLT LG + Sbjct 113 NNEQFLEMILQALRNPYFQPFMGRRALPLTADFILGETE 151 >ref|YP_001530867.1| CRISPR-associated Cas5 family protein [Desulfococcus oleovorans Hxd3] gb|ABW68790.1| CRISPR-associated protein Cas5 family [Desulfococcus oleovorans Hxd3] Length=259 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/166 (36%), Positives = 83/166 (50%), Gaps = 20/166 (12%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 YL+ RL GPM +WG+ TR T +P RS ++GL+ A LGI+R +T + QAL + Sbjct 3 YLLFRLYGPMASWGEIAVGETRHTANYPGRSAIIGLMAAALGIKRSETENQQALDQGCLI 62 Query 64 AVRCDELILDDRRVSVTGLRDYHT----------VLGARED--YRGLKSHETIQTWREYL 111 AV R + LRDYHT V R D G TI + REY Sbjct 63 AVEA--------RSHGSLLRDYHTTQVPDSVGGFVYRTRRDELIIGKPRLGTILSSREYR 114 Query 112 CDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 DA A+ + P A + ++ + +PR YLGR+SCPL+ P+ Sbjct 115 QDALAVSAVRVLPGARYELQTIKTHLEQPRLHVYLGRKSCPLSAPM 160 >ref|YP_004616616.1| CRISPR-associated protein Cas5 family [Methanosalsum zhilinae DSM 4017] gb|AEH61397.1| CRISPR-associated protein Cas5 family [Methanosalsum zhilinae DSM 4017] Length=240 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 28/188 (14%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YLI R+ P+ +WG RPT P++S + GLL A LGI RDD + L+ S Sbjct 1 MKDYLIFRIYAPIASWGDIAIGTHRPTFDHPSKSAIFGLLAAALGIDRDDDEAHLKLNSS 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHT--VLGAREDYRGLKSHE---------TIQTWRE 109 + V + LRDYHT V G + + E TI + R+ Sbjct 61 YNYGVLVNS--------HGNMLRDYHTSQVPGKSKKTHSSRKEELETDDNNLNTIISTRD 112 Query 110 YLCDASFTVALWLTPHA-----TMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQA 164 Y D +T+ L +M+I +L P + YLGR+SCPL+ PL A Sbjct 113 YYSDCLYTIILSSKSEEPPYPFSMLIDKLN----NPSFNLYLGRKSCPLSLPLDPKVVSA 168 Query 165 SDPQKALL 172 S+ ++ALL Sbjct 169 SNMKEALL 176 >ref|ZP_02683899.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] ref|YP_002042182.1| CRISPR-associated Cas5 family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gb|ACF61675.1| crispr-associated protein Cas5, ecoli subtype [Salmonella enterica subsp. enterica serovar Newport str. SL254] gb|EDZ35819.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length=241 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 19/169 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ +L P+ +WG+ R + PTRS LLGLL A LGI+RD+ + L ++ Sbjct 1 MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNQH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARED--YRGLKSHE----------TIQTWR 108 AV L DR LRDYHTV RE+ YR + T+ + R Sbjct 61 YHLAVHA--LASQDR-----WLRDYHTVGAPRENKKYRYYTRRDELTLAPDEVGTLISQR 113 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 EY CD + VA+ TP A +SEL +A+L P + YLGR+SCPL PL Sbjct 114 EYRCDGYWHVAISATPDAPHSLSELREALLTPHFPLYLGRKSCPLALPL 162 >ref|ZP_08505508.1| hypothetical protein METUNv1_02571 [Methyloversatilis universalis FAM5] gb|EGK71184.1| hypothetical protein METUNv1_02571 [Methyloversatilis universalis FAM5] Length=252 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 26/187 (13%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 +LI +L P+ +WG RP+ +P S L+GLLGA LGI+RDD ++ AL + + Sbjct 3 FLIFQLQAPLASWGDTAVGEYRPSRDYPGLSALVGLLGAALGIRRDDEAAHAALRDHYAY 62 Query 64 AVRCDELILDDRRVSVTG--LRDYHTVL------------GAREDYRGLKSHE--TIQTW 107 V + G LRD+HT +R D + H+ TI + Sbjct 63 TV----------GIQSPGDLLRDFHTAQVPSQATLKKRPHASRRDELVIPGHDLNTILST 112 Query 108 REYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDP 167 R+Y A+ VA+ A + +L A+ +PR+T YLGR+SCP PLF +A+D Sbjct 113 RDYRQGAACVVAVEAGETAGYSLEQLAHALRRPRFTLYLGRKSCPPGAPLFPQVIEAADA 172 Query 168 QKALLNY 174 + A Y Sbjct 173 ESAFETY 179 >ref|YP_003257851.1| CRISPR-associated protein Cas5 family [Pectobacterium wasabiae WPP163] gb|ACX86244.1| CRISPR-associated protein Cas5 family [Pectobacterium wasabiae WPP163] Length=244 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 65/170 (38%), Positives = 92/170 (54%), Gaps = 20/170 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M +YL+ ++ P+ +WG+ R T P+RS LLGLL A LGI+RDD ++L A ++ Sbjct 1 MDNYLVFQIYAPLVSWGEAAVGEVRHTSTVPSRSALLGLLAAALGIRRDDRAALTAFNQH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYR-------------GLKSHETIQTW 107 AVR L DR T L DYHTV +E+ + +S ET+ T Sbjct 61 YSVAVRP----LSDRE---TWLNDYHTVQMPKENRKVPRYTRRDELRPEAGQSLETMLTS 113 Query 108 REYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 REY CDA + +A+ +TP A ++ L A+L P + Y GR+SCP PL Sbjct 114 REYRCDAYYHIAISVTPDAPYSLTALRDALLSPVFALYFGRKSCPPALPL 163 >ref|ZP_02661038.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] ref|YP_002115890.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gb|ACF92600.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gb|EDY30130.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length=241 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 89/169 (52%), Gaps = 19/169 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ +L P+ +WG+ R + PTRS LLGLL A LGI+RD+ + L + Sbjct 1 MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARED--YRGLKSHE----------TIQTWR 108 AV L DR LRDYHTV RE+ YR + T+ + R Sbjct 61 YHLAVHA--LASQDR-----WLRDYHTVSAPRENKKYRYYTRRDELTLAPDEVGTLISQR 113 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 EY CD + VA+ TP A +SEL +A+L P + YLGR+SCPL PL Sbjct 114 EYRCDGYWHVAISATPDAPHSLSELREALLTPHFPLYLGRKSCPLALPL 162 >gb|EGC81843.1| CRISPR system CASCADE complex protein CasD [Anaerococcus prevotii ACS-065-V-Col13] Length=227 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 16/157 (10%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 ++L+L+GPMQAWG + TR T +P++S ++G+L A LG +RDD + L+E + FA Sbjct 4 ILLKLSGPMQAWGTGSKFETRYTDHYPSKSAIIGMLAASLGYRRDD-ERISKLNE-IDFA 61 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D+ R ++ +RDYH + ++ G + T R YL D F VA+ Sbjct 62 VRVDQ------RPNL--IRDYH--IASKYKKNGTFERNYV-TNRYYLEDGVFVVAVGSND 110 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGT 161 +I +L +A+ P + PY+GRRSCP +G Sbjct 111 E---LIEKLYRALENPYFQPYMGRRSCPPPADFLIGV 144 >ref|YP_308458.1| hypothetical protein cbdb_B36 [Dehalococcoides sp. CBDB1] ref|YP_003463067.1| CRISPR-associated protein Cas5 family [Dehalococcoides sp. GT] emb|CAI83542.1| conserved hypothetical protein,CRISP-associated [Dehalococcoides sp. CBDB1] gb|ADC74611.1| CRISPR-associated protein Cas5 family [Dehalococcoides sp. GT] Length=205 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 57/153 (37%), Positives = 89/153 (58%), Gaps = 17/153 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L++RL GPMQ+WG + R T PTRSG++GL+ A +GI RD+ A + ++ Sbjct 7 LLMRLEGPMQSWGYRSRFDCRDTALEPTRSGVIGLICAAMGIARDEDI---ARFDGIRMG 63 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGA-REDYRGLKSHETIQTWREYLCDASFTVALWLT 123 VR D D +V +DYHT L + D G +T+ ++R+YL DASFTV L + Sbjct 64 VRVDR----DGKVE----QDYHTALDVIKADGSG---KDTVVSYRDYLTDASFTVGLESS 112 Query 124 PHATMVISELEKAVLKPRYTPYLGRRSCPLTHP 156 ++ ++ KA++ P++ +LGR++ PLT P Sbjct 113 DRN--LLEKIAKALVSPQWVLFLGRKAFPLTKP 143 >dbj|BAE95526.1| CRISPR-associated protein [Streptomyces kanamyceticus] Length=245 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 85/158 (53%), Gaps = 20/158 (12%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S L L+LAGP+QAWG R T PT+SG++GLL A G++R T+ L AL+ +++ Sbjct 2 SVLALQLAGPLQAWGASARFARRTTENAPTKSGVIGLLAAAQGLER--TADLTALT-ALR 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWL 122 F VR D+ T +RD+ T + + R YL DA F AL Sbjct 59 FGVRIDQ--------PGTRIRDFQTA------HHPDTGQAMPISDRYYLADAVFVAALEG 104 Query 123 TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 T +I+EL+ A+ P Y P+LGRRSCP + PL LG Sbjct 105 T---ADLIAELDAALRCPHYLPFLGRRSCPPSRPLNLG 139 >ref|ZP_08324810.1| CRISPR system CASCADE complex protein CasD [Parasutterella excrementihominis YIT 11859] gb|EGG50907.1| CRISPR system CASCADE complex protein CasD [Parasutterella excrementihominis YIT 11859] Length=249 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 33/222 (14%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M +LI +L GPM +WG+ G R T PT+S LLG+L +GI RD A + + Sbjct 1 MDQFLIFQLFGPMASWGECAPGGVRQTLGIPTKSALLGILEGAVGITRDREKMHGAFAAN 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 +F + E + +D+HTV L +E+ + ETI + R+ Sbjct 61 YEFVICGSE--------NPVWAQDFHTVQVPKENKKILYLTRKEELSNPEQLETILSTRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL-----------F 158 YL D+ + VA+ P A + EL++ + +P +TPYLGR+S P P Sbjct 113 YLSDSWWLVAVKAKPQAPYSLEELKEYMERPTFTPYLGRKSNPSGLPFCPQIMSGDLKGV 172 Query 159 LGTCQASDPQK---ALLNYEPVGGDIYSEESVTGHHLKFTAR 197 LG+C +K LN + D Y E KF R Sbjct 173 LGSCSKKFKEKLNSVGLNLPELQTDGYWERECQDLKPKFIIR 214 >gb|AEI37908.1| CRISPR-associated protein Cas5 family [Zymomonas mobilis subsp. pomaceae ATCC 29192] Length=268 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 88/192 (45%), Gaps = 27/192 (14%) Query 2 RSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESV 61 R +L+ RL GPM A+G+ R P++S +LGL+ A G+ R D L AL E++ Sbjct 4 REFLLFRLKGPMAAFGEIAVGERRSLWDVPSKSAILGLVAAAKGLGRQDPK-LLALDENL 62 Query 62 QFAVRCDELILDDRRVSVTGLRDYHT------------------VLGAREDYRGLKSHET 103 FAV D V+ LRD+HT + R D T Sbjct 63 GFAVHRD--------VAPQKLRDFHTAQIPSEADRKKRQKAGQDISTRRGDLNTKDKLNT 114 Query 104 IQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ 163 + + R Y D +FTVALW + +S L K + P + YLGR+SCPL+ P + Sbjct 115 VISERFYQTDVAFTVALWAKSEKLVDLSLLGKFLKYPNFVLYLGRKSCPLSAPPYPKIMT 174 Query 164 ASDPQKALLNYE 175 AS +KA Y Sbjct 175 ASGLRKAFHFYN 186 >ref|YP_003484525.1| hypothetical protein SmuNN2025_0607 [Streptococcus mutans NN2025] dbj|BAH87633.1| hypothetical protein [Streptococcus mutans NN2025] Length=238 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 18/149 (12%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 ++L+ AGP+Q+WG + TR T +P++S ++G++ A LG +R++ ++ L+E + FA Sbjct 4 ILLKFAGPLQSWGTNSHFETRHTDFYPSKSAVIGMIAASLGYRRNEDEKIRKLNE-LDFA 62 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D+ LRD+H A+ D K + T R YL DA F VA+ Sbjct 63 VRVDQ--------QGNLLRDWH---NAKSD----KRKDPYTTNRYYLEDAVFVVAISHQN 107 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPL 153 +A I +E + P + P++GRR+CPL Sbjct 108 YA--FIQMIEDGLRSPYFQPFMGRRACPL 134 >gb|ADW07904.1| CRISPR-associated protein Cas5 family [Streptomyces flavogriseus ATCC 33331] Length=241 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 83/158 (52%), Gaps = 18/158 (11%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S L LRLAGP+Q+WG R T PT+S ++GLL A GI+R D + L+ L+ +++ Sbjct 2 SVLSLRLAGPLQSWGASGRFTRRTTESAPTKSAVIGLLAAAAGIERGDDTRLEPLA-ALR 60 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWL 122 F VR D+ + +RD+ T + + + R YL DA F A+ Sbjct 61 FGVRIDQ--------PGSRVRDFQTA------HHSVSGKSMPLSERFYLADAVFVAAV-- 104 Query 123 TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 T ++S+L A+ P Y P+LGRRSCP P+ LG Sbjct 105 -EGDTTLLSDLHAALRNPVYPPFLGRRSCPPAQPVDLG 141 >ref|ZP_04998419.1| crispr-associated protein [Streptomyces sp. Mg1] gb|EDX22930.1| crispr-associated protein [Streptomyces sp. Mg1] Length=257 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 108/239 (45%), Gaps = 41/239 (17%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSESV 61 S L LRLAGP+Q+WG R T PT+SG++G+L A LG R DD S L AL Sbjct 2 SVLTLRLAGPLQSWGSSARFARRTTETAPTKSGVVGMLAAALGRDRTDDLSDLAALG--- 58 Query 62 QFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALW 121 FAVR D+ S T +RD+ T A D + + + + VA Sbjct 59 -FAVRIDQ--------SGTRVRDFQTAHHADTD-------KAMPVSERFYLADAVFVAAV 102 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDI 181 H ++ L +AV P Y PYLGRRSCP P+ LG DP A L +EP Sbjct 103 AGDHD--LVRTLHEAVRAPVYLPYLGRRSCPPQGPVDLGITDGDDPAAA-LGHEPWQAAE 159 Query 182 YSE--------------ESVTGHHLKFTARDEPMITLP--RQFASREWYVIKGGMDVSQ 224 + + E G L T RD+P+ P R++A R V+ ++VS Sbjct 160 HHQRRHTTATVSLPVLAEVAAGVTLGATLRDQPVSFAPSHRRYALRN--VVSTSIEVSN 216 >ref|YP_001220072.1| CRISPR-associated Cas5 family protein [Acidiphilium cryptum JF-5] gb|ABQ28930.1| CRISPR-associated protein, Cas5e family [Acidiphilium cryptum JF-5] Length=249 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 92/211 (43%), Gaps = 21/211 (9%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ +L L P+ ++G R + P RS +LGL+GACLGI+R+D AL Sbjct 1 MKRFLTFTLFAPIASFGAIAVGERRESWSRPARSAVLGLVGACLGIEREDAEEQAALERD 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV----------LGAREDYRGLKSHETIQTWREY 110 FA+ C S L D+HT+ R + + +TI T R+Y Sbjct 61 FGFALLCG--------TSGGPLADFHTLQVGRPARGQTFRTRAEELNSNTVDTILTRRDY 112 Query 111 LCDASFTVALWLTP--HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQ 168 A ALW+ + +L A+ +P +TPYLGRR+CPL PL A P Sbjct 113 RVSAWHLAALWVRSVVDPRWALEDLADAMKQPAFTPYLGRRACPLGLPLAPQIIDADSPA 172 Query 169 KALLNYEPVGGDIYSEESVTGH-HLKFTARD 198 AL G + S+ G F ARD Sbjct 173 SALDRRWASGPEAEFRPSLAGTIQDLFVARD 203 >dbj|BAJ32233.1| putative CRISPR-associated protein [Kitasatospora setae KM-6054] Length=270 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 83/159 (52%), Gaps = 11/159 (6%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSESVQF 63 L+L LAGP+Q+WG+ + R T FPTRSG++GLL LG +R +D L LS Sbjct 7 LLLHLAGPLQSWGERSKFNERDTAPFPTRSGVIGLLACALGRRRGEDIDDLARLS----L 62 Query 64 AVRCDE--LILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALW 121 VR D ++L D GL HTV A E + + T+ + R YL DA FT AL Sbjct 63 TVRADRPGVLLRDLHTVGGGLPARHTVTTA-EGKKRPAAAATLLSHRYYLADAVFTAALT 121 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 + A+ +P + PYLGRRSCP PL LG Sbjct 122 ---GPADTLRTCAAALREPFWPPYLGRRSCPPEGPLLLG 157 >ref|YP_289648.1| CRISPR-associated Cas5e family protein [Thermobifida fusca YX] gb|AAZ55625.1| CRISPR-associated protein, Cas5e family [Thermobifida fusca YX] Length=254 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 97/188 (51%), Gaps = 12/188 (6%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S +LRLAGPMQ+WG+ + G R T +P+RSGL+G+ A G++R D L E ++ Sbjct 2 SGFLLRLAGPMQSWGEHSMFGERDTLPYPSRSGLIGMFAAAQGVRRGD--PLDRYKE-LK 58 Query 63 FAVRCDE--LILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 F VR D + L D GL TV A + R K TI T R YL DA FTVA+ Sbjct 59 FTVRVDRPGVRLVDFHTIGGGLPKERTVPTAAGERRDPK-KATIVTSRSYLADAVFTVAV 117 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 P A + A+ P + PYLGRR+ + PL + + +DP + L+ P+ Sbjct 118 -TGPEADTIAD----ALAAPYWQPYLGRRAF-VPDPLLVLRRRVADPVRELVEAVPLPHR 171 Query 181 IYSEESVT 188 E++ T Sbjct 172 RVEEDAAT 179 >ref|YP_003133587.1| CRISPR-associated protein, Cas5e family [Saccharomonospora viridis DSM 43017] gb|ACU96760.1| CRISPR-associated protein, Cas5e family [Saccharomonospora viridis DSM 43017] Length=262 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 92/187 (49%), Gaps = 36/187 (19%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRLAGP+Q+WG + R T PT+SG+LGLL A G R T S + L+E ++F Sbjct 7 LLLRLAGPLQSWGDRSVFNRRETRPEPTKSGVLGLLAAAQG--RPRTQSPEDLAE-LRFG 63 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHE-----------------TIQTW 107 VR D+ + LRDYHTV DYRG+ + T T Sbjct 64 VRVDQ--------PGSLLRDYHTV----SDYRGVPLRQAGVNAKGEQKPTSPVKTTHVTH 111 Query 108 REYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDP 167 R YL DA F A+ V++ L +AV +P Y LGRRSCP T PL L D Sbjct 112 RYYLQDAVFVAAVA---GPAPVMTALAEAVRRPAYPLALGRRSCPPTQPLVL-KLDERDM 167 Query 168 QKALLNY 174 + AL Y Sbjct 168 ETALTEY 174 >ref|ZP_06368471.1| CRISPR-associated protein Cas5 family [Desulfovibrio sp. FW1012B] gb|EFC21334.1| CRISPR-associated protein Cas5 family [Desulfovibrio sp. FW1012B] Length=266 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 91/197 (46%), Gaps = 33/197 (16%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L G + A+G R + PTRS + GLL ACLGI+R + + L ALS Sbjct 1 MARYLIFQLYGMLAAYGLVAVGEVRLSAGHPTRSAVFGLLAACLGIRRHEEARLAALSGG 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGL---KSHE------------TIQ 105 AVR D T L DYHT+ E + + ++ E T+ Sbjct 61 YALAVRVD--------APGTSLLDYHTIQTPPEKSKRIYRTRADELGGLLGIDEPPYTVL 112 Query 106 TWREYLCDASFTVALWLTPHAT--------MVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 + R YLCDA FT LTP A + L +A+ +P TPYLGR+SCP + P Sbjct 113 SRRGYLCDAHFTA--CLTPAAAPPTDATPPHTLEALAEALRRPVLTPYLGRKSCPPSLPF 170 Query 158 FLGTCQASDPQKALLNY 174 + + AL +Y Sbjct 171 HPRLGEYDSLEAALADY 187 >ref|YP_003679228.1| CRISPR-associated protein Cas5 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gb|ADH66722.1| CRISPR-associated protein Cas5 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length=242 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 65/170 (38%), Positives = 91/170 (53%), Gaps = 22/170 (12%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S L L LAGP+QAWG + R T PT+SG+LGLL A LG RD T+ L L+ +++ Sbjct 5 SVLPLVLAGPLQAWGSASRFARRGTENAPTKSGVLGLLAAALG--RDRTADLSDLA-ALR 61 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQ-TWREYLCDASFTVALW 121 F VR D+ + +RDY T + L + ++ + R YL DA F A+ Sbjct 62 FGVRVDQPGIR--------VRDYQTA-------KHLDTDTSMPVSERFYLSDAVFVAAV- 105 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKAL 171 +++EL +AV P Y PYLGRRSCP + P+ LG A ++ L Sbjct 106 --EGPEGLVAELYRAVRDPVYLPYLGRRSCPPSRPVDLGEPVAGTVEEVL 153 >ref|YP_685785.1| hypothetical protein RCIX1151 [uncultured methanogenic archaeon RC-I] emb|CAJ36459.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length=227 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 74/150 (49%), Gaps = 15/150 (10%) Query 11 GPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDEL 70 GPMQ+WG R TG PT+SG++GLLG LG R D L ++ + Sbjct 13 GPMQSWGLKARWDIRDTGDEPTKSGIIGLLGCALGYARKDPRLTDELDSQLRIGI----- 67 Query 71 ILDDRRVSVTG--LRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATM 128 RV G RDYHTV G G TI ++R+YL DA+F V L Sbjct 68 -----RVECPGEIARDYHTVSGELRTAEGKLRETTIVSFRDYLQDAAFLVVL---EGPGE 119 Query 129 VISELEKAVLKPRYTPYLGRRSCPLTHPLF 158 +++ + A+ P + YLGR+SCP T P+F Sbjct 120 LLTRISNALKDPVWPIYLGRKSCPPTRPVF 149 >ref|ZP_07610873.1| CRISPR-associated protein Cas5 family [Streptomyces violaceusniger Tu 4113] gb|EFN13666.1| CRISPR-associated protein Cas5 family [Streptomyces violaceusniger Tu 4113] Length=287 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 109/217 (50%), Gaps = 34/217 (15%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+L LAGP+Q+WG+ + R T FPT+SG+ GLL LG +R +T ++ L+ S+ Sbjct 12 LLLHLAGPLQSWGEHSRFNQRDTAPFPTKSGITGLLACALGRRRGET--IEDLA-SMSLT 68 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHE---------TIQTWREYLCDAS 115 +R DRR + LRD HTV G R + + E T+ + R YL DA+ Sbjct 69 IRS------DRRGVL--LRDLHTVGGGLPAKRTVTTAEGKKRPSSAATLLSHRYYLADAA 120 Query 116 FTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 FT A+ H ++ + A+ +P + YLGRRSCP PL +G +P L+ Sbjct 121 FTAAITSDDH--QLLQQCAAALKEPAWPLYLGRRSCPPHGPLLIGDGLFRNPLHHLVRL- 177 Query 176 PVG-------GDIYSEESVTGHHLKFTARDEPMITLP 205 P+ D EE+ + F + D+P+ TLP Sbjct 178 PLATASSSRHDDAAVEETAA---IDFIS-DQPLDTLP 210 >ref|ZP_04653549.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length=241 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 88/169 (52%), Gaps = 19/169 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ +L + +WG+ R + PTRS LLGLL A LGI+RD+ + L + Sbjct 1 MKEYLVFQLYASLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARED--YRGLKSHE----------TIQTWR 108 AV L DR LRDYHTV RE+ YR + T+ + R Sbjct 61 YHLAVHA--LASQDR-----WLRDYHTVSAPRENKKYRYYTRRDELTLAPDEVGTLISQR 113 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 EY CD + VA+ TP A +SEL +A+L P + YLGR+SCPL PL Sbjct 114 EYRCDGYWHVAISATPDAPHSLSELREALLTPHFPLYLGRKSCPLALPL 162 >gb|EGI92622.1| CRISPR-associated protein Cas5 domain protein [Shigella boydii 5216-82] Length=199 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 76/161 (47%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ + I +WR+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSNPELLSAIISWRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A ++ +L++ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYILEQLQEGLRHPVFPLYLGRKS 153 >ref|ZP_07333998.1| CRISPR-associated protein Cas5 family [Desulfovibrio fructosovorans JJ] gb|EFL50712.1| CRISPR-associated protein Cas5 family [Desulfovibrio fructosovorans JJ] Length=244 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 8/192 (4%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M +++LRL GP+ +G + RPT + P++S L GL+ LG + + + L L E Sbjct 1 MTEFMVLRLTGPLMVFGDVAVDENRPTAQLPSQSMLTGLVANALGWRAREGARLNRLQER 60 Query 61 VQFAVRCD---ELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFT 117 + + R D E D + V + + RG ++ +Q WR+Y+ D + T Sbjct 61 IVYGARRDRVGETFTDYQNVHIAPGQTMWRFRTTGPLKRGGLKYDNVQRWRDYVADGAVT 120 Query 118 VALWLTPH-ATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGT-CQASDPQKALL--- 172 V L LTP + + +A L+P +LGR SCP + PL+ G AS +AL Sbjct 121 VVLALTPEDEPPTLDAVRRAFLRPARPLFLGRVSCPPSGPLYRGKDVMASSVPEALALVS 180 Query 173 NYEPVGGDIYSE 184 + E GGD ++ Sbjct 181 SLETPGGDFLAQ 192 >ref|YP_003300273.1| CRISPR-associated Cas5 family protein [Thermomonospora curvata DSM 43183] gb|ACY98235.1| CRISPR-associated protein Cas5 family [Thermomonospora curvata DSM 43183] Length=234 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 66/160 (41%), Positives = 81/160 (50%), Gaps = 22/160 (13%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSESV 61 S L+L+LAGP+QAWG + R T PT+SG++GLL A LG +R D L AL Sbjct 2 SVLLLQLAGPLQAWGSSSRFARRTTEPAPTKSGVIGLLAAALGRERSHDPGDLAAL---- 57 Query 62 QFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALW 121 +F VR D+ T +RDY T E R + E R YL DA F AL Sbjct 58 RFGVRVDQ--------RGTPIRDYQTAHHF-ETGRSMPVSE-----RFYLADAVFVAALE 103 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGT 161 +I L AV P + PYLGRRSCP + PL LG Sbjct 104 ---GPDDLIDTLHDAVRHPVFLPYLGRRSCPPSRPLDLGV 140 >ref|YP_004372357.1| CRISPR-associated protein, Cas5e family [Coriobacterium glomerans PW2] gb|AEB06542.1| CRISPR-associated protein, Cas5e family [Coriobacterium glomerans PW2] Length=234 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 24/161 (14%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 + L+LRL+GP+Q+WG + R T R PT+SG++GLL + LG R++ SL L++ ++ Sbjct 2 AVLLLRLSGPLQSWGDSSRFTRRATRREPTKSGVIGLLASALGRTREE--SLNDLAK-LE 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQ-TWREYLCDASFTVALW 121 F VR D+ LRD+ T R L T+ + R YL DA F AL Sbjct 59 FGVRIDQ--------QGNMLRDFQT-------ERSLDGKTTMPLSNRYYLADAIFLAAL- 102 Query 122 LTPHATM-VISELEKAVLKPRYTPYLGRRSCPLTHPLFLGT 161 H + V+ +L++A+ PR+ YLGRRSCP P+ LG Sbjct 103 ---HGKLDVLHKLDEAIQNPRWPLYLGRRSCPPDPPISLGV 140 >ref|YP_001661547.1| CRISPR-associated Cas5 family protein [Streptomyces sp. HK1] gb|ABY83527.1| CRISPR-associated protein Cas5 [Streptomyces sp. HK1] Length=293 Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 88/267 (32%), Positives = 118/267 (44%), Gaps = 68/267 (25%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSE--S 60 + L+LRLAGP+Q+WG + R TG PT+SG++GLL A G R+ Q L E Sbjct 23 TVLLLRLAGPLQSWGVRSSFNRRDTGAEPTKSGVIGLLAAAAGHPRE-----QPLGELAD 77 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLK------SHETIQ--------- 105 + +R D+ T LRDYHTV DYRG S + IQ Sbjct 78 LTLGIRVDQ--------PGTLLRDYHTV----SDYRGRPLPQAGVSAKGIQKPTSPAKHT 125 Query 106 --TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG--- 160 T R YL DA F AL P +++ L++AV P + LGRRSCP T PL LG Sbjct 126 HVTTRFYLQDAVFVAALEGPP---GLLTTLDRAVRNPAFPLALGRRSCPPTQPLSLGLRT 182 Query 161 ----TCQASDPQKALLN---------------YEPV-GGDIYSEESVTGHHLKFTARDEP 200 T S+P +A + ++P+ G I ++ H +D P Sbjct 183 TDMETALRSEPWQASAHTREQYARRLGRERGLHQPLHPGTIDRAATIEDPHGDDRLQDAP 242 Query 201 MITLPRQ--FASRE----WYVIKGGMD 221 + P Q F SR+ W I G D Sbjct 243 VSFDPHQRAFTSRQVRHTWLAIPTGFD 269 >ref|YP_003323627.1| CRISPR-associated protein Cas5 family [Thermobaculum terrenum ATCC BAA-798] gb|ACZ42805.1| CRISPR-associated protein Cas5 family [Thermobaculum terrenum ATCC BAA-798] Length=230 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 34/207 (16%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L++RL+GPMQ+WG + R TGR P++SG++GL+ A LG R T+ + L ++ Sbjct 4 LLMRLSGPMQSWGTQSRFTVRDTGREPSKSGVIGLICAALG--RPRTAPVDDLVR-LRMG 60 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYR-GLKS----HETIQTWREYLCDASFTVA 119 VR D R + +RDYHT GA R G+ + +Q+ R YL DASF VA Sbjct 61 VRVD-------REGIV-MRDYHTAGGAPAGERYGVATVTGDQRPVQSSRYYLADASFLVA 112 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGT-------CQASDPQKALL 172 L ++ ++++A+ PR+ +LGR+SC + P+ L + D + AL+ Sbjct 113 LEGGEEDRPLLEQIDEALRAPRWQLFLGRKSCVPSEPIHLPKEPPLGPPIREEDLRTALI 172 Query 173 NYE-PVGGDIYSEESVTGHHLKFTARD 198 +Y P G H L+F D Sbjct 173 SYPWPEG----------AHRLRFVFED 189 >ref|YP_289655.1| CRISPR-associated Cas5e family protein [Thermobifida fusca YX] gb|AAZ55632.1| CRISPR-associated protein, Cas5e family [Thermobifida fusca YX] Length=245 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/173 (38%), Positives = 89/173 (51%), Gaps = 25/173 (14%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSESVQF 63 L L LAGP+QAWG + R T PT+SG+LGLL A G +R DD S L AL +F Sbjct 4 LTLLLAGPLQAWGAASRFTRRTTEHAPTKSGVLGLLAAAQGRERTDDLSDLAAL----RF 59 Query 64 AVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQ-TWREYLCDASFTVALWL 122 VR D+ T +RD+ T + L + +++ + R YL DA F A+ Sbjct 60 GVRVDQ--------RGTRIRDFQTAI-------HLDTGKSMPVSERFYLADAVFVAAVE- 103 Query 123 TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 +I L +AV P Y PYLGRRSCP + P+ LG + P + +L E Sbjct 104 --GEDTLIDTLHQAVQHPVYLPYLGRRSCPPSRPINLG-VHSGKPLEQVLAEE 153 >ref|ZP_07272640.1| CRISPR-associated protein [Streptomyces sp. SPB78] gb|EFL01009.1| CRISPR-associated protein [Streptomyces sp. SPB78] Length=242 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 85/159 (53%), Gaps = 24/159 (15%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSESV 61 S L L LAGP+QAWG + R T R PT+SG++GLL A G +RD D S L AL Sbjct 6 SVLTLCLAGPLQAWGTSSRFVRRSTERAPTKSGVIGLLAAAQGRERDADLSDLAAL---- 61 Query 62 QFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQ-TWREYLCDASFTVAL 120 +FAVR D+ T +RD+ T R L + ++ + R YL DA F A+ Sbjct 62 RFAVRLDQ--------PGTRVRDFQTA-------RHLDTDASMPVSERFYLSDAVFVAAV 106 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFL 159 A ++ EL AV P + P+LGRRSCP + P+ L Sbjct 107 E---GAADLVDELLAAVRAPVFLPFLGRRSCPPSRPVDL 142 >dbj|BAJ26390.1| putative CRISPR-associated protein [Kitasatospora setae KM-6054] Length=277 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 72/193 (37%), Positives = 94/193 (48%), Gaps = 38/193 (19%) Query 2 RSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSES 60 R+ L+LRLAGP+Q+WG + R T PT+SG++GLL A G R+ D + L L Sbjct 11 RAVLLLRLAGPLQSWGDRSAFNRRDTTPQPTKSGVVGLLAAAAGRPREADLTDLVGL--- 67 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGL-----------------KSHET 103 + VR D+ T LRDYHTV DYRGL S T Sbjct 68 -RLGVRVDQ--------PGTLLRDYHTV----SDYRGLPLPQAGVNAKGVQKPTSPSKHT 114 Query 104 IQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ 163 T R YL DA F VA+ +++ L +AV +P + LGRRSC T PL LG + Sbjct 115 HVTHRYYLQDAVFLVAVE---GPAELVTALGEAVTRPAFPLALGRRSCTPTQPLSLGVRR 171 Query 164 ASDPQKALLNYEP 176 + P + L EP Sbjct 172 GT-PLETALAEEP 183 >ref|ZP_08365221.1| CRISPR-associated protein Cas5 [Escherichia coli TA143] emb|CBG35781.1| CRISPR-associated protein [Escherichia coli 042] gb|EGI30227.1| CRISPR-associated protein Cas5 [Escherichia coli TA143] Length=248 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 76/161 (47%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ L+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSNLELLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ TP A + +L++ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTPDAPYSLEQLQEDLRHPVFPLYLGRKS 153 >ref|YP_003114635.1| CRISPR-associated protein Cas5 family [Catenulispora acidiphila DSM 44928] gb|ACU72794.1| CRISPR-associated protein Cas5 family [Catenulispora acidiphila DSM 44928] Length=245 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 80/160 (50%), Gaps = 22/160 (13%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSESV 61 S L LR AGP+Q+WG + R T PT+S ++GLL A LG +RD D S L AL Sbjct 2 STLALRFAGPLQSWGVASRFAWRTTTSTPTKSAVVGLLAAALGWERDADLSDLAAL---- 57 Query 62 QFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALW 121 +F VR D+ +RD+ T + G ++R YL DA F A+ Sbjct 58 RFGVRADQ--------PGVRVRDFQTA------HHGDTGVSMPLSYRFYLADAVFLAAV- 102 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGT 161 +I L A+ +P + PYLGRRSCP + P+ +G Sbjct 103 --EGDDQLIEALHAAIKRPHFLPYLGRRSCPPSQPVNIGV 140 >ref|ZP_03934572.1| CRISPR-associated protein [Corynebacterium striatum ATCC 6940] gb|EEI78891.1| CRISPR-associated protein [Corynebacterium striatum ATCC 6940] Length=232 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 83/161 (51%), Gaps = 22/161 (13%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSE 59 M S L+L L GPMQ+WG + R TG+ PT+SG++G+L A LG +R D L LS Sbjct 1 MTSTLLLLLKGPMQSWGDDSRYKQRKTGQVPTKSGVIGMLAAALGRRRVDPIEDLAGLS- 59 Query 60 SVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVA 119 F VR D+ T L+D+ T L G + + + R +L DA F A Sbjct 60 ---FGVRVDQ--------PGTLLKDFQTALP-----EGASNAQLVT--RYFLSDAVFVAA 101 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 + A ++ +E A+ +PR+ +LGRRSCP L LG Sbjct 102 VESEERA--LLENIESALRRPRFPLFLGRRSCPAPADLVLG 140 >ref|ZP_02043675.1| hypothetical protein ACTODO_00523 [Actinomyces odontolyticus ATCC 17982] gb|EDN80087.1| hypothetical protein ACTODO_00523 [Actinomyces odontolyticus ATCC 17982] Length=242 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 86/165 (52%), Gaps = 22/165 (13%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M + L+LRLAGPMQ+WG + R T FPT+S L+GLLGA G +R D ++ L+E Sbjct 1 MSAVLVLRLAGPMQSWGADSRFTRRSTEAFPTKSALVGLLGAAQGRRRSD--PIEDLAE- 57 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 + AVR D+ L D+HT R D SH R Y DA+F A Sbjct 58 LSVAVRVDQ--------PGQLLHDFHT--AHRGDTSMPLSH------RFYRADAAFG-AF 100 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 P +I L +A+++P + YLGRRSCP T PL L + S Sbjct 101 IEGPDD--MIDALAQAIVRPVFPLYLGRRSCPPTLPLRLAVREGS 143 >ref|YP_003652141.1| Cas5 family CRISPR-associated protein [Thermobispora bispora DSM 43833] gb|ADG88248.1| CRISPR-associated protein Cas5 family [Thermobispora bispora DSM 43833] Length=232 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/174 (35%), Positives = 86/174 (49%), Gaps = 22/174 (12%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSESV 61 S L+++LAGP+Q+WG + R T PT+SG++GLL A G R D + L AL Sbjct 2 SVLLMQLAGPLQSWGSSSRFARRATEAAPTKSGVIGLLAAAQGRPRSADLADLAAL---- 57 Query 62 QFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALW 121 +F VR D+ T LRD+ T +R + R YL DA F + Sbjct 58 RFGVRIDQ--------PGTLLRDFQTA------HRFDTGAALPISERFYLADAVFVAGVE 103 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 P +I EL +++L P + PYLGRRSCP P+ LG ++AL E Sbjct 104 GEPG---IIEELHRSLLHPVFLPYLGRRSCPPARPISLGVRHELTLEQALGTEE 154 >ref|YP_003437885.1| CRISPR-associated protein Cas5 family [Klebsiella variicola At-22] gb|ADC56873.1| CRISPR-associated protein Cas5 family [Klebsiella variicola At-22] Length=241 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/169 (37%), Positives = 87/169 (51%), Gaps = 19/169 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ +L P+ +WG+ R + PTRS LLGL+ A LGI+RD+ L ++ Sbjct 1 MKEYLVFQLYAPLASWGEEASGEIRHSAAVPTRSALLGLVAAALGIRRDEEERLNTFNQH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARED--YRGLKSHE----------TIQTWR 108 AV L +R LRDYHTV RE+ YR + T+ + R Sbjct 61 YHLAVHA--LASQER-----WLRDYHTVSAPRENKKYRYFTRRDELTLAPDEIGTLISQR 113 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 EY CD + VAL T A ++ L +A+L P + YLGR+SCPL PL Sbjct 114 EYRCDGYWHVALSATAGAPYALTALREALLTPYFPLYLGRKSCPLALPL 162 >ref|YP_001438899.1| hypothetical protein ESA_02834 [Cronobacter sakazakii ATCC BAA-894] gb|ABU78063.1| hypothetical protein ESA_02834 [Cronobacter sakazakii ATCC BAA-894] Length=250 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 88/174 (50%), Gaps = 19/174 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG+ R T P RS LLGLL A LGI+RDD ++L AL++ Sbjct 1 MNRYLIFQLQGPMASWGEIAVGEVRHTRALPGRSALLGLLAAALGIRRDDEAALNALNQH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE-----------DYRGLKSHETIQTWRE 109 QF V + S RDYHTV RE + R + ET + R+ Sbjct 61 YQFIVCAGK--------SSAWARDYHTVQVPREARKVRYFTRKDELRDAQMLETTLSRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ 163 Y D + VA+ TP A + L+ A+ P + YLGR+S PL PL+ C+ Sbjct 113 YYADGYWLVAVAATPGAPYTLEALQTALRAPVFPLYLGRKSHPLGLPLWPHLCE 166 >ref|ZP_05965615.1| CRISPR-associated protein Cas5 [Bifidobacterium gallicum DSM 20093] gb|EFA23035.1| CRISPR-associated protein Cas5 [Bifidobacterium gallicum DSM 20093] Length=250 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/174 (35%), Positives = 92/174 (52%), Gaps = 15/174 (8%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S LILRLAGPMQ+WG + R T PT+S ++GLL + G +R+D S++ L ++ Sbjct 2 SVLILRLAGPMQSWGDSSRFNRRETRTEPTKSAVIGLLASAQGRRRED--SIEDLL-GLR 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWL 122 F VR D+ R+ +RD+ T G S T R YL DA F VA+ Sbjct 59 FGVRSDQ----PGRI----MRDFQTEKSIARKKSGEFSLTMPLTHRYYLADAKFLVAI-- 108 Query 123 TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEP 176 ++ L+ A+ P++ +LGRRSCP P+ LG ++ ++A L+ EP Sbjct 109 -EGERSLLESLDAALRNPQWPLFLGRRSCPPASPVSLGVKDYANVEEA-LDKEP 160 >ref|YP_003202376.1| CRISPR-associated Cas5 family protein [Nakamurella multipartita DSM 44233] gb|ACV79387.1| CRISPR-associated protein Cas5 family [Nakamurella multipartita DSM 44233] Length=252 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 98/210 (46%), Gaps = 22/210 (10%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S L+LRL GPMQ+WG+ + R T P++S ++GLL A LG +R D +++ L+ + Sbjct 2 SVLVLRLTGPMQSWGERSRYARRETAAEPSKSAIVGLLAAALGRRRTD--AIEDLAGLI- 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQ-TWREYLCDASFTVALW 121 F VR D+ T LRD+ T R L T+ + R YL DA F A+ Sbjct 59 FGVRVDQ--------PGTLLRDFQTA-------RSLDGARTMPLSERYYLSDARFLAAVE 103 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDI 181 P + +I+ L A+ P + YLGRRSCP + P+ C S P A L EP Sbjct 104 -GPES--LIAGLAGALRDPTFPLYLGRRSCPPSEPIAQQDCIRSGPLLAALFDEPWHATK 160 Query 182 YSEESVTGHHLKFTARDEPMITLPRQFASR 211 V A D +P Q A R Sbjct 161 SYRRRVADPARLSIAVDAAATEVPAQLAER 190 >ref|ZP_06609098.1| CRISPR-associated protein Cas5 [Actinomyces odontolyticus F0309] gb|EFF79643.1| CRISPR-associated protein Cas5 [Actinomyces odontolyticus F0309] Length=242 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 86/165 (52%), Gaps = 22/165 (13%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M + L+LRLAGPMQ+WG + R T FPT+S L+GLLGA G +R D ++ L+E Sbjct 1 MSAVLVLRLAGPMQSWGADSRFTRRSTEAFPTKSALVGLLGAAQGRRRSD--PIEDLAE- 57 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 + AVR D+ L D+HT R D SH R Y DA+F A Sbjct 58 LSLAVRVDQ--------PGQLLHDFHT--AHRGDTSMPLSH------RFYRADAAFG-AF 100 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 P +I L +A+++P + YLGRRSCP T PL L + + Sbjct 101 IEGPDD--MIDALAQAIVRPVFPLYLGRRSCPPTLPLRLAVREGN 143 >ref|YP_479144.1| CRISPR-associated Cas5e family protein [Frankia sp. CcI3] gb|ABD09415.1| CRISPR-associated protein, Cas5e family [Frankia sp. CcI3] Length=276 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 89/187 (47%), Gaps = 37/187 (19%) Query 2 RSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESV 61 R L+LRLAGP+Q+WG + R T PT+SG++GLL A G +R T ++ L S+ Sbjct 7 RHCLVLRLAGPLQSWGSRSMFNRRDTLTEPTKSGIIGLLAAAQGRRR--TDPIEDLL-SL 63 Query 62 QFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGL-----------------KSHETI 104 +R D+ T LRDYHTV DYRG + T Sbjct 64 TLGIRTDQ--------PGTLLRDYHTV----SDYRGRPLPSAAVSAKGLQKPTSPAKHTH 111 Query 105 QTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQA 164 T R YL DA F AL V++ L A+ P + LGRR+CP THPL L Sbjct 112 VTERFYLQDAVFVAALAA---PEPVLTTLADALRTPAFPLALGRRACPPTHPLLL--VPD 166 Query 165 SDPQKAL 171 S+P AL Sbjct 167 SEPDAAL 173 >ref|ZP_02900922.1| CRISPR-associated protein Cas5 [Escherichia albertii TW07627] gb|EDS94188.1| CRISPR-associated protein Cas5 [Escherichia albertii TW07627] Length=248 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 75/161 (46%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ +TP A + +L++ + P + YLGR+S Sbjct 113 YYTDAWWMVAVAITPDAPYSLEQLQEGLRHPVFPLYLGRKS 153 >ref|YP_003109597.1| CRISPR-associated protein Cas5 family [Acidimicrobium ferrooxidans DSM 10331] gb|ACU53924.1| CRISPR-associated protein Cas5 family [Acidimicrobium ferrooxidans DSM 10331] Length=253 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 86/176 (48%), Gaps = 31/176 (17%) Query 3 SYLILRLAGPMQAWGQPT-FEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESV 61 S L LRL GP+QAWG + R T RFPT+SG++GLL A LG R +++L L ++ Sbjct 2 SVLALRLGGPLQAWGSSQRLDHYRRTERFPTKSGVIGLLAAALGRPR--SAALDDLG-AL 58 Query 62 QFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHE----------------TIQ 105 +FAVR D R V LRD+HT+ +D + E T Sbjct 59 RFAVRID------RPGEV--LRDFHTLSSLFDDKKRFAPGEGRLPTASGGYRSAATSTQV 110 Query 106 TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGT 161 T R YL DA F L + EL+ A+ P + YLGRRSCP PL LG Sbjct 111 TERFYLADACFVAGL---EGDAAQLQELDDALRTPVFPLYLGRRSCPPDKPLRLGV 163 >ref|ZP_06264280.1| CRISPR system CASCADE complex protein CasD [Propionibacterium acnes J139] gb|EFB87475.1| CRISPR system CASCADE complex protein CasD [Propionibacterium acnes J139] gb|EFS88259.1| CRISPR-associated protein Cas5 [Propionibacterium acnes HL001PA1] gb|EFT11289.1| CRISPR-associated protein Cas5 [Propionibacterium acnes HL082PA2] gb|EFT25769.1| CRISPR-associated protein Cas5 [Propionibacterium acnes HL110PA3] gb|EFT64291.1| CRISPR-associated protein Cas5 [Propionibacterium acnes HL110PA4] gb|EFT66655.1| CRISPR-associated protein Cas5 [Propionibacterium acnes HL060PA1] gb|EGE70491.1| CRISPR-associated protein Cas5 [Propionibacterium acnes HL103PA1] Length=235 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 14/162 (8%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 + L+LRLAGP+Q+WG + TR T R PT+SG++GLL A G +R T SL+ L +++ Sbjct 2 TVLLLRLAGPLQSWGDSSRFTTRATRREPTKSGVIGLLAAAQGRRR--TDSLEDLL-TLR 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWL 122 F VR D+ + +RD+ T + + + + R YL DA F A+ Sbjct 59 FGVRTDQ--------PGSIVRDFQTAMDWAHPKKDGRVKAMPLSNRYYLADAVFVAAVEG 110 Query 123 TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQA 164 P ++ L++A+ P + YLGRRSCP + LG ++ Sbjct 111 DPS---LLQALDEAIRDPEFPLYLGRRSCPTEGQVSLGVRES 149 >ref|YP_002989167.1| CRISPR-associated protein Cas5 family [Dickeya dadantii Ech703] gb|ACS87345.1| CRISPR-associated protein Cas5 family [Dickeya dadantii Ech703] Length=245 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 65/170 (38%), Positives = 88/170 (51%), Gaps = 20/170 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L P+ +WG+P R T P+RS LLGLL A LGI+RD+ L + Sbjct 1 MTEYLVFQLYAPLASWGEPAVGEVRHTSPVPSRSALLGLLAAALGIRRDEEERLAQFNAH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLK-------------SHETIQTW 107 +FA+R L R LRDYHTV RE+ + ++ ET+ T Sbjct 61 YRFALRA----LSRRE---GWLRDYHTVQMPREERKRVRYTRRDELCSDPGQGLETLLTA 113 Query 108 REYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 REY CDA + VA+ T A + +S L A+ P + YLGR+SCP PL Sbjct 114 REYRCDAYYHVAVSATDGAPVTLSRLADALRTPVFPLYLGRKSCPPALPL 163 >ref|YP_003810004.1| CRISPR-associated protein, CT1976 [gamma proteobacterium HdN1] emb|CBL44345.1| CRISPR-associated protein, CT1976 [gamma proteobacterium HdN1] Length=255 Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 94/185 (50%), Gaps = 18/185 (9%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+LRL GP+ +WG+ +R + P+RS LLGLLGA LGI+R D + QAL + Sbjct 1 MTDYLLLRLYGPLASWGEIAVGESRHSAVHPSRSALLGLLGAALGIERHDDAGQQALIQG 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV----------LGAREDYRGLKSHETIQTWREY 110 +F ++ + + LRDYHTV +R +TI + REY Sbjct 61 YRFGIKLE--------CVGSPLRDYHTVQTGVPPRKFQFRSRRQELAADKIDTILSTREY 112 Query 111 LCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKA 170 CD+ VA+ P A + + L +A+ +P + YLGR+SCPL PL A + A Sbjct 113 RCDSLALVAVEAMPGAPVNLISLAEALRRPHFALYLGRKSCPLALPLLPQVISAPSLRVA 172 Query 171 LLNYE 175 L E Sbjct 173 LDGVE 177 >ref|YP_004606591.1| CRISPR-associated protein [Corynebacterium resistens DSM 45100] gb|AEI10427.1| CRISPR-associated protein [Corynebacterium resistens DSM 45100] Length=238 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/175 (35%), Positives = 94/175 (53%), Gaps = 18/175 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M S L+L L GP+Q+WG + TR T P++SG+LG+L A G R D ++ L+ Sbjct 1 MTSTLLLLLKGPLQSWGNDSRYATRTTASVPSKSGVLGMLAAAQGRCRSD--GIEDLA-G 57 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 ++FAVR D+ S + LRDY T ++++ + + R +L DA+F A Sbjct 58 LRFAVRVDQ--------SGSLLRDYQTA----QEWQRKDNPDAKLITRYFLSDAAFVAA- 104 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 + + I L +A+L+P Y +LGRRSCP L LG + + +AL NYE Sbjct 105 -IESEDSDFIDGLRRALLRPVYPVFLGRRSCPAPPNLVLGVVETT-AVEALQNYE 157 >ref|ZP_08384969.1| CRISPR-associated protein Cas5 [Escherichia coli H299] gb|EGI49198.1| CRISPR-associated protein Cas5 [Escherichia coli H299] Length=248 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSAPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ TP A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTPDAPYSLEQLQDGLCHPVFPLYLGRKS 153 >emb|CBL34420.1| CRISPR-associated protein Cas5, Ecoli subtype [Eubacterium siraeum V10Sc8a] Length=227 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 86/156 (55%), Gaps = 21/156 (13%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRLA P+Q+WG + TR T +PT+SG++GL+ + +G +R T L L+E ++ Sbjct 4 LLLRLAAPLQSWGVESKFDTRRTLGYPTKSGVIGLVASAMGRER--TEPLDDLNE-LKIG 60 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 +R + + R++ RDYHT G K+ + I T R YL DA+F V L Sbjct 61 IRVEN---EGRQI-----RDYHTA-------NGEKTKKYI-THRFYLSDATFLVG--LEH 102 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 I ++E A+ P + +LGRRSCP T PL G Sbjct 103 KDAGFIEKIEDALKHPAFPLFLGRRSCPPTPPLVWG 138 >ref|YP_003744990.1| crispr-associated protein, cas5e-type [Ralstonia solanacearum CFBP2957] emb|CBJ42360.1| CRISPR-associated protein, Cas5e-type [Ralstonia solanacearum CFBP2957] Length=257 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 75/260 (28%), Positives = 114/260 (43%), Gaps = 50/260 (19%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ RL GP+ +WG+ +R + +P++S LLGLLGA LG++RDD + QAL+ Sbjct 1 MTEYLLFRLYGPLASWGEIAVGESRHSAMYPSKSALLGLLGAALGVRRDDDAGQQALARG 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGA-----------REDYRGLKSHETIQTWRE 109 +F V+ + + LRDYHTV R++ ++ T+ + RE Sbjct 61 YRFGVKL--------LTAGSPLRDYHTVQAPPQRRKTVYRTRRQELADTQALGTLLSARE 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQK 169 Y CD+ VA P A + + A+ +P + YLGR+SCPL PL +A + Sbjct 113 YRCDSLALVAAEALPDAPHALDAVADALRRPHFPLYLGRKSCPLALPLQPQLARAETLRA 172 Query 170 AL----------------------------LNYEPVGGDIYSEESVTG---HHLKFTARD 198 AL ++P Y E+ + L+ D Sbjct 173 ALDDARFPSPTALLSSHPEQPWPTERDGHVFAFQPAAQRYYWEDGMRAGMEPALQLVRND 232 Query 199 EPMITLPRQFASREWYVIKG 218 +P+ QFA R Y I G Sbjct 233 QPLSRRRWQFAPRREYAILG 252 >ref|YP_001464079.1| CRISPR-associated Cas5 family protein [Escherichia coli E24377A] ref|ZP_06663503.1| CRISPR-associated protein cas5 [Escherichia coli B088] ref|ZP_07592445.1| CRISPR-associated protein Cas5 family [Escherichia coli W] gb|ABV17903.1| CRISPR-associated protein Cas5 [Escherichia coli E24377A] gb|EFE61601.1| CRISPR-associated protein cas5 [Escherichia coli B088] gb|EFN37756.1| CRISPR-associated protein Cas5 family [Escherichia coli W] gb|ADT76365.1| hypothetical protein ECW_m2964 [Escherichia coli W] gb|ADX49647.1| CRISPR-associated protein Cas5 family [Escherichia coli KO11] Length=248 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 74/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ + I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSAPELLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ TP A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKS 153 >gb|AEG68388.1| CRISPR-associated protein, Cas5e-type [Ralstonia solanacearum Po82] Length=257 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 19/168 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ RL GP+ +WG+ +R + +P++S LLGLLGA LG++RDD + QAL+ Sbjct 1 MTEYLLFRLYGPLASWGEIAVGESRHSAMYPSKSALLGLLGAALGVRRDDDAGQQALARG 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGA-----------REDYRGLKSHETIQTWRE 109 +F V+ + T LRDYHTV R++ ++ T+ + RE Sbjct 61 YRFGVKL--------LTAGTPLRDYHTVQAPPQRRKTVYRTRRQELADTQALGTLLSARE 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 Y CD+ VA P A + + +A+ +P + YLGR+SCPL PL Sbjct 113 YRCDSLALVAAEALPDAPHALDAVVEALRRPHFPLYLGRKSCPLALPL 160 >gb|EGL71483.1| hypothetical protein CSE899_17572 [Cronobacter sakazakii E899] Length=250 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/174 (37%), Positives = 87/174 (50%), Gaps = 19/174 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG+ R T P RS LLGLL A LGI+RDD ++L L++ Sbjct 1 MNRYLIFQLQGPMASWGEIAVGEVRHTRALPGRSALLGLLAAALGIRRDDEAALNTLNQH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE-----------DYRGLKSHETIQTWRE 109 QF V + S RDYHTV RE + R + ET + R+ Sbjct 61 YQFIVCAGK--------SSAWARDYHTVQVPREARKVRYFTRKDELRDAQMLETTLSRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ 163 Y D + VA+ TP A + L+ A+ P + YLGR+S PL PL+ C+ Sbjct 113 YYADGYWLVAVAATPGAPYTLEALQTALRAPVFPLYLGRKSHPLGLPLWPHLCE 166 >ref|YP_003767958.1| hypothetical protein AMED_5809 [Amycolatopsis mediterranei U32] gb|ADJ47556.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length=236 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 16/175 (9%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M L L PMQ+WG + R T R PT+SG++GLL A G++RDD + + L+ + Sbjct 1 MTHTLALCFDAPMQSWGLRSRGILRDTAREPTKSGVVGLLAAATGVERDDEAGIATLA-A 59 Query 61 VQFAVRCD-ELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVA 119 ++ VR D E +L+ RDYHT H T+ + R YL DA F VA Sbjct 60 LRLGVRVDREGLLE---------RDYHTTQNVPTTTG--SGHRTVVSERYYLADALFLVA 108 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNY 174 + ++SEL AV PR+ + GRR+ PLF A + ++ L + Sbjct 109 I---EGPETLLSELADAVTNPRWPLFFGRRAFVSARPLFDDGLHAGNLEQILREH 160 >ref|YP_003331954.1| Cas5 family CRISPR-associated protein [Dickeya dadantii Ech586] gb|ACZ75249.1| CRISPR-associated protein Cas5 family [Dickeya dadantii Ech586] Length=245 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 88/164 (53%), Gaps = 20/164 (12%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L P+ +WG+P R T P+RS LLGLL A LGI+RD+ + L + Sbjct 1 MTEYLVFQLYAPLASWGEPAVGEVRHTSPVPSRSALLGLLAAALGIRRDEEARLAQFNAH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLK-------------SHETIQTW 107 +FAVR L R LRDYHTV RE+ + ++ ET+ T Sbjct 61 YRFAVRA----LSRRE---GWLRDYHTVQMPREERKRVRYTRRDELCSDPEQGLETLLTA 113 Query 108 REYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSC 151 REY CDA + VA+ T A + +S+L +A+ P + YLGR+SC Sbjct 114 REYRCDAYYHVAVSATEGAPVTLSQLAQALRTPVFPLYLGRKSC 157 >ref|ZP_03028602.1| CRISPR-associated protein Cas5 [Escherichia coli B7A] ref|ZP_07689647.1| CRISPR-associated protein Cas5 [Escherichia coli MS 145-7] gb|EDV62870.1| CRISPR-associated protein Cas5 [Escherichia coli B7A] gb|EFO58461.1| CRISPR-associated protein Cas5 [Escherichia coli MS 145-7] Length=248 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 74/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ + I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ TP A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKS 153 >ref|ZP_08355236.1| CRISPR-associated protein Cas5 [Escherichia coli M718] gb|EGI19695.1| CRISPR-associated protein Cas5 [Escherichia coli M718] Length=248 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 74/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKSRYFSRREELSDPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ TP A + +L++ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTPDAPYSLEQLQEGLRHPVFPLYLGRKS 153 >ref|NP_289306.1| hypothetical protein Z4066 [Escherichia coli O157:H7 EDL933] ref|NP_311638.1| hypothetical protein ECs3611 [Escherichia coli O157:H7 str. Sakai] ref|ZP_02774938.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4113] 39 more sequence titles

ref|ZP_02780511.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4401] ref|ZP_02787848.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4501] ref|ZP_02793858.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4486] ref|ZP_02799715.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4196] ref|ZP_02803749.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4076] ref|ZP_02813020.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC869] ref|ZP_02825169.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC508] ref|ZP_03084852.1| hypothetical protein EscherichcoliO157_24168 [Escherichia coli O157:H7 str. EC4024] ref|ZP_03249786.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4206] ref|ZP_03254426.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4045] ref|ZP_03258684.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4042] ref|YP_002272221.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4115] ref|ZP_03443097.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. TW14588] ref|YP_003079534.1| hypothetical protein ECSP_3705 [Escherichia coli O157:H7 str. TW14359] ref|ZP_05940333.1| hypothetical protein EscherichiacoliO157_15848 [Escherichia coli O157:H7 str. FRIK2000] ref|YP_003500902.1| CRISPR-associated protein Cas5 [Escherichia coli O55:H7 str. CB9615] gb|AAG57864.1|AE005503_5 orf; hypothetical protein [Escherichia coli O157:H7 str. EDL933] dbj|BAB37034.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gb|EDU33469.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4196] gb|EDU53877.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4113] gb|EDU72495.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4076] gb|EDU75704.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4401] gb|EDU80545.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4486] gb|EDU85278.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4501] gb|EDU90555.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC869] gb|EDU95915.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC508] gb|EDZ76851.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4206] gb|EDZ83061.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4045] gb|EDZ86169.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4042] gb|ACI35624.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. EC4115] gb|EEC27806.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. TW14588] gb|ACT73458.1| hypothetical protein ECSP_3705 [Escherichia coli O157:H7 str. TW14359] gb|ADD57918.1| CRISPR-associated protein Cas5 [Escherichia coli O55:H7 str. CB9615] gb|EFX09941.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. G5101] gb|EFX14928.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H- str. 493-89] gb|EFX19682.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H- str. H 2687] gb|EFX24566.1| CRISPR-associated protein Cas5 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gb|EFX29737.1| CRISPR-associated protein Cas5 [Escherichia coli O55:H7 str. USDA 5905] gb|EFX34350.1| CRISPR-associated protein Cas5 [Escherichia coli O157:H7 str. LSU-61]

Length=248 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSAPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ TP A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKS 153 >gb|EFZ58577.1| CRISPR-associated protein Cas5 domain protein [Escherichia coli LT-68] Length=248 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 74/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ + I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ TP A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKS 153 >ref|ZP_07096055.1| CRISPR-associated protein Cas5 [Escherichia coli MS 107-1] gb|EFK52822.1| CRISPR-associated protein Cas5 [Escherichia coli MS 107-1] Length=248 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 74/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ + I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ TP A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKS 153 >ref|ZP_05365997.1| CRISPR-associated protein Cas5 [Corynebacterium tuberculostearicum SK141] gb|EET77373.1| CRISPR-associated protein Cas5 [Corynebacterium tuberculostearicum SK141] Length=238 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 17/165 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M L+L L GPMQ+WG + TR T P++SG+LG+L A G +R D ++ L+ Sbjct 1 MTYSLLLLLKGPMQSWGTESRYATRATSTLPSKSGVLGMLAAAEGRRRTD--GVEDLA-G 57 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 ++FAVR D+ S + LRDY T + D +G T R +L DA+F A Sbjct 58 LKFAVRVDQ--------SGSLLRDYQTAQNWQNDPKGQAKLIT----RYFLTDAAFVAA- 104 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 + ++ +++ +P Y +LGRRSCP + LG S Sbjct 105 -IESEDQDLLEGFAESLKRPVYPIFLGRRSCPAPPNIVLGVVNGS 148 >ref|YP_001691075.1| hypothetical protein FMG_P0058 [Finegoldia magna ATCC 29328] dbj|BAG09107.1| conserved hypothetical protein [Finegoldia magna ATCC 29328] Length=228 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 35/239 (14%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S ++L+ A P+Q+WG R T +PT+S ++GL+ A G ++ DT S++ L+ S+ Sbjct 2 SVILLKFASPLQSWGGLANYEIRNTEYYPTKSAVIGLVAAAFGYKKTDTESIKRLN-SLN 60 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDY-----RGLKSHETIQTWREYLCDASFT 117 F+VR D+ + +RD+ + Y IQ + Y+ DA F Sbjct 61 FSVRIDQ--------KGSLIRDFQIAMEYNPKYMPNDPNYFVKSNLIQKY--YIQDAKFL 110 Query 118 VALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ-------------A 164 +A L+ ++ ++ A+ P Y +LGR+S P+ +G A Sbjct 111 IA--LSSDDETLMEDVYNALESPAYQLFLGRKSNPINADYLIGKFDGNELEIIKDYEWLA 168 Query 165 SDPQKALLNYEPVGGDIYSEESVTGHHLKFTARD--EPMITLPRQFASR-EW-YVIKGG 219 S K + + V I+S+ TG K RD E R F+SR E+ YV K G Sbjct 169 SKWYKKSIKKDSVELSIFSDYIDTGSKEKLIRRDLTESFENTKRDFSSRFEYRYVTKVG 227 >ref|ZP_07799842.1| CRISPR-associated protein Cas5 [Faecalibacterium cf. prausnitzii KLE1255] gb|EFQ06782.1| CRISPR-associated protein Cas5 [Faecalibacterium cf. prausnitzii KLE1255] Length=220 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 20/172 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRLA P+QAWG + TR TGR PT+SG++GLL A LG++RD+ +L L+ ++F Sbjct 4 LLLRLAAPLQAWGADSKFETRKTGREPTKSGVIGLLAAALGLRRDEREALLRLT-GLRFG 62 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 +R + L DYHT E + T+R YL DA F + Sbjct 63 IRVER--------EGQLLVDYHTAKTQDE-------KTSYVTYRHYLQDAVFLAG--IES 105 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEP 176 ++ +L++A+L P + YLGRR CP T PL LG S + +L EP Sbjct 106 EDAALLQQLQQALLHPVFPLYLGRRCCPPTLPLCLGVRPGS--LQEVLQAEP 155 >ref|ZP_07135554.1| CRISPR-associated protein Cas5 [Escherichia coli MS 115-1] gb|EFJ97182.1| CRISPR-associated protein Cas5 [Escherichia coli MS 115-1] Length=248 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ TP A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVVPTPEAPYSLEQLQDGLRHPVFPLYLGRKS 153 >ref|YP_001843511.1| hypothetical protein LAF_0695 [Lactobacillus fermentum IFO 3956] dbj|BAG27031.1| hypothetical protein [Lactobacillus fermentum IFO 3956] Length=235 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/173 (34%), Positives = 85/173 (49%), Gaps = 31/173 (17%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR--DDTSSLQALSESVQ 62 L++R+A P+Q++G P R T R P++S ++G++GA LG +R DD SL L Sbjct 4 LVIRIAAPLQSYGDPASFEKRTTFRAPSKSAVIGMIGAALGFRRESDDYKSLNDLD---- 59 Query 63 FAVRCDE--LILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 FAVR D+ +L D +++ L+ G SH R YL DA F VAL Sbjct 60 FAVRVDQPGEVLSDFQITHYSLKK-----------PGKLSH------RIYLQDAVFMVAL 102 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLN 173 A M E+E A+ P++ Y GRRS P L + C P K +N Sbjct 103 SSKQDALM--EEIEYALRHPKFQLYFGRRSNPPAGILKMKMC----PDKTAIN 149 >ref|ZP_03349717.1| hypothetical protein Salmonentericaenterica_00731 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length=193 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 86/164 (52%), Gaps = 19/164 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M+ YL+ +L P+ +WG+ R + PTRS LLGLL A LGI+RD+ + L + Sbjct 1 MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARED--YR--------GLKSHE--TIQTWR 108 AV L DR LRDYHTV RE+ YR L S E T+ + R Sbjct 61 YHLAVHA--LASQDR-----WLRDYHTVSAPRENKKYRYYTRRDELTLASDEVGTLISQR 113 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCP 152 EY CD + VA+ TP A +SEL +A+L P + YLGR+ P Sbjct 114 EYRCDGYWHVAISATPDAPYSLSELREALLTPHFPLYLGRKYLP 157 >gb|EGC05372.1| CRISPR protein [Escherichia fergusonii B253] gb|EGC94053.1| CRISPR-associated Cas5 family protein [Escherichia fergusonii ECD227] Length=248 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 74/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTECLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ R I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELRDPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L++ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQEGLRHPVFPLYLGRKS 153 >ref|ZP_05949225.1| hypothetical protein EscherichiacoliO157EcO_12765 [Escherichia coli O157:H7 str. FRIK966] Length=248 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 75/161 (46%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFN-- 58 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 C ++ + RDYHTV RE+ I + R+ Sbjct 59 ------CHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSAPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ TP A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKS 153 >ref|YP_120639.1| hypothetical protein nfa44240 [Nocardia farcinica IFM 10152] dbj|BAD59275.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=235 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 + L+LRLA P+Q+WG + R T ++P++SG+LGL+ A G +R D ++ +++ Sbjct 2 TVLLLRLAAPLQSWGVASRFARRETQQYPSKSGILGLIAAARGHRRTD--PIEEALQNLA 59 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWL 122 F VR D+ +RD+ L K+ + + R YL DA F A+ Sbjct 60 FGVRVDQ--------PGRLIRDFQVALNID------KTKQFPLSQRYYLADAVFLAAI-- 103 Query 123 TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 +I + A+ +P + YLGRRSCP+T PL LG + + AL E Sbjct 104 -QGERGLIEGIGNALRRPEFPLYLGRRSCPVTGPLVLGEPRDVTLEHALHETE 155 >ref|YP_001952710.1| CRISPR-associated protein Cas5 family [Geobacter lovleyi SZ] gb|ACD96190.1| CRISPR-associated protein Cas5 family [Geobacter lovleyi SZ] Length=271 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 111/239 (46%), Gaps = 40/239 (16%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 YL+ RL GP+ +WG+ +R + +P +S LLGL+ A LGI+RD+ AL+ +F Sbjct 3 YLLFRLYGPLASWGEIAVGESRHSAVYPGKSALLGLIAAALGIRRDEEQRQAALASGYRF 62 Query 64 AVRCDELILDDRRVSVTG--LRDYHT----------VLGARED--YRGLKSHETIQTWRE 109 AV +V TG LRDYHT V R D G + TI + RE Sbjct 63 AV----------KVISTGHPLRDYHTAQAPDSVGKFVYRTRRDELVLGKERLGTILSSRE 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQK 169 Y CDA VA+ A + E+ +A++KPR+ YLGR+SCP+ PL A Sbjct 113 YRCDAFSLVAVVAEDDAPYSLDEIREALMKPRFHLYLGRKSCPVAAPLNPLVRDAVGFGD 172 Query 170 ALLNYEPVGGDIYS--------EESVTGHHL-------KFTARDEPMITLPRQFASREW 213 AL +Y P G S +E V G L KF+ DE + +Q W Sbjct 173 ALDSY-PYGALFVSSWLMKTAQKEIVEGGKLAEVPSLAKFSREDETVFAYNKQPVRYYW 230 >gb|EAY58008.1| CRISPR-ssociated protein, Cas5 [Leptospirillum rubarum] gb|EDZ39841.1| CRISPR-associated protein, Cas5 [Leptospirillum sp. Group II '5-way CG'] Length=227 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 22/177 (12%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L++RL PMQ+WG + R TG+ P++SG++GLL A LGI R++ L+ L+ + Sbjct 4 LLIRLVSPMQSWGTSSRFDQRDTGKEPSKSGVIGLLAAALGIDRNNWDDLEPLA-GLSMG 62 Query 65 VRCDELILDDRRVSVTGL--RDYHT---VLGAREDYRGLKSHETIQTWREYLCDASFTVA 119 VR D G+ RDY T ++ A K H T T+REYL DA F V Sbjct 63 VRHDR----------PGIPRRDYQTASKIISADHS----KIHPTAVTYREYLADAVFLVG 108 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEP 176 ++ ++ A+ P + +LGR+S + P+++ + P + L + P Sbjct 109 --FESAEVSLLEKINSALKNPVWPLFLGRKSYVPSEPIWIENGLKNVPLREALEHFP 163 >ref|ZP_06835008.1| CRISPR-associated protein Cas5 [Gluconacetobacter hansenii ATCC 23769] gb|EFG83856.1| CRISPR-associated protein Cas5 [Gluconacetobacter hansenii ATCC 23769] Length=259 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 82/164 (50%), Gaps = 10/164 (6%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M +L + GPM ++G R G P RS +LGL+GACLGI RDD ++ +AL Sbjct 1 MGQFLTFAMVGPMASFGTLAVGERRDGGDRPARSAILGLMGACLGITRDDRNAQEALGMG 60 Query 61 VQFAVRCDE--LILDDRRVSVTG--LRDYHTVLGAREDYRGLKSHETIQTWREYLCDASF 116 AV C +L D + T R++H A+E G TI + R+Y + Sbjct 61 YGLAVLCHAPGRLLTDYHTAQTAPSRRNWHPATRAQE-LAGAGELATILSRRDYRMGSWH 119 Query 117 TVALWL---TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 A+W TP T + +L A+ +P +TP LGR+SCP PL Sbjct 120 LGAIWARDETPRWT--LEDLCHAMCEPVFTPSLGRKSCPPGLPL 161 >ref|YP_002294287.1| hypothetical protein ECSE_3012 [Escherichia coli SE11] dbj|BAG78536.1| conserved hypothetical protein [Escherichia coli SE11] gb|EGB85505.1| CRISPR-associated protein Cas5 [Escherichia coli MS 117-3] Length=248 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 72/161 (44%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GIQRDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIQRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKS 153 >ref|YP_003209411.1| hypothetical protein CTU_10480 [Cronobacter turicensis z3032] emb|CBA28701.1| hypothetical protein CTU_10480 [Cronobacter turicensis z3032] Length=250 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 65/174 (37%), Positives = 86/174 (49%), Gaps = 19/174 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L G M +WG+ R T P RS LLGLL A LGI+RDD ++L AL+ Sbjct 1 MNRYLIFQLQGAMASWGEIAVGEVRHTRALPGRSALLGLLAAALGIRRDDDAALNALNAH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE-----------DYRGLKSHETIQTWRE 109 QF V +L RDYHTV RE + R + ET + R+ Sbjct 61 YQFIVCAGKL--------SAWARDYHTVQVPREARKVRYVTRKDELRDAQMLETTLSRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ 163 Y D + VA+ TP A + L+ A+ P + YLGR+S PL PL+ C+ Sbjct 113 YYADGYWLVAVAATPGAPYTLEALQTALRAPVFPLYLGRKSHPLGLPLWPQLCE 166 >ref|YP_001825057.1| CRISPR-associated Cas5e family protein [Streptomyces griseus subsp. griseus NBRC 13350] dbj|BAG20374.1| putative CRISPR-associated protein CT1976 [Streptomyces griseus subsp. griseus NBRC 13350] Length=270 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 22/158 (13%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSESV 61 + L+LRLAGP+Q+WG R T PT+SG++GLL A G +RD D + L AL Sbjct 2 TVLLLRLAGPLQSWGSAARFTRRTTENAPTKSGVIGLLAAAQGRRRDADLTDLAAL---- 57 Query 62 QFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALW 121 +F VR D+ + LRD+ T + + + + E R YL DA F + Sbjct 58 EFGVRIDQ--------PGSRLRDFQTARHS-DTLKAMPLSE-----RFYLADAVFVAGVS 103 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFL 159 ++ L +A+L+P + PYLGRRSCP + P+ + Sbjct 104 ---GEAGLVQRLYEALLEPVFLPYLGRRSCPPSQPVTI 138 >ref|YP_001678815.1| crispr-associated protein cas5 [Heliobacterium modesticaldum Ice1] gb|ABZ82804.1| crispr-associated protein cas5 [Heliobacterium modesticaldum Ice1] Length=230 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 82/159 (51%), Gaps = 17/159 (10%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L LRL GP+Q+WG + R + PT+SG++GLLG LG R+D L++L +++ Sbjct 6 LALRLEGPLQSWGSRSRWDYRDSALEPTKSGIIGLLGCALGWSRND-KRLESLDAALRLT 64 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHE-----TIQTWREYLCDASFTVA 119 VR D+ T L D+HTV G G + T+ + R YL +ASF Sbjct 65 VRIDK--------PGTPLIDFHTVQGYLLMAEGKQKKSGNDMYTVVSRRVYLQEASF--- 113 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLF 158 L L + + +KA+ P + +LGR+SCP PLF Sbjct 114 LALLTGEQGALHQCKKALNDPVWPVFLGRKSCPPARPLF 152 >ref|ZP_07400244.1| CRISPR-associated protein cas5 [Peptoniphilus duerdenii ATCC BAA-1640] gb|EFM24724.1| CRISPR-associated protein cas5 [Peptoniphilus duerdenii ATCC BAA-1640] Length=232 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 16/155 (10%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+L+ AGP+Q+WG + TR T +P++S ++G++ A G +R + ++ L++ + FA Sbjct 7 LLLKFAGPLQSWGTDSKFETRYTDFYPSKSAVIGMIAASFGYRRHEDEKIKKLND-LDFA 65 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D+ R ++ LRDY + D R +++ T R YL DA F VA+ Sbjct 66 VRVDQ------RGNL--LRDYQIATAYKPDGRFERNYVTN---RYYLEDAIFVVAI---G 111 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFL 159 I ++E ++ P + + G+RS P+ +P F+ Sbjct 112 GEDNFIDQIEHSLKNPYFQTFFGKRSNPI-NPDFI 145 >gb|EGB73716.1| CRISPR protein [Escherichia coli TW10509] Length=248 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTECLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSAPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L++ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQEGLRHPVFPLYLGRKS 153 >ref|ZP_07151358.1| CRISPR-associated protein Cas5 [Escherichia coli MS 21-1] gb|EFK21930.1| CRISPR-associated protein Cas5 [Escherichia coli MS 21-1] Length=248 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTECLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L++ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQEGLRHPAFPLYLGRKS 153 >ref|ZP_08019575.1| CRISPR-associated protein Cas5 family protein [Lautropia mirabilis ATCC 51599] gb|EFV94308.1| CRISPR-associated protein Cas5 family protein [Lautropia mirabilis ATCC 51599] Length=254 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 22/183 (12%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL++RL GPM +WG+ TR + P+RS LLGLLGA LG+ R+D S Q+LS + Sbjct 1 MAEYLMMRLYGPMASWGEIAVGKTRRSSVQPSRSALLGLLGAALGVDRNDESKQQSLSGA 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARED----YRGLKSH------ETIQTWREY 110 +F V+ + + T LRD+HT R +R + + I + R+Y Sbjct 61 YRFGVKLE--------AAGTPLRDFHTTEICRPSRKITFRSRRQELMSDKDDPILSSRDY 112 Query 111 LCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKA 170 CD+ VA+ + + L +A+ +P Y YLGR+SCPL P+ QA+ Sbjct 113 RCDSLAIVAVERVDQSGEELKRLAEALRRPVYPLYLGRKSCPLALPVDPKVVQAN----G 168 Query 171 LLN 173 LLN Sbjct 169 LLN 171 >ref|YP_356383.1| hypothetical protein Pcar_0960 [Pelobacter carbinolicus DSM 2380] gb|ABA88213.1| CRISPR-associated protein, Cas5e family [Pelobacter carbinolicus DSM 2380] Length=244 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/169 (37%), Positives = 87/169 (51%), Gaps = 24/169 (14%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 +L+ RL GP+ AWG+ +R + +P++S LLGLL A LGI+RD+ AL+ Sbjct 2 KHLVFRLYGPLAAWGEIAVGESRHSAVYPSKSALLGLLAAALGIRRDEEEQQAALAAGYL 61 Query 63 FAVRCDELILDDRRVSVTG--LRDYHT----------VLGARED--YRGLKSHETIQTWR 108 FAV +V TG LRDYHT V R + RG TI + R Sbjct 62 FAV----------KVLRTGSLLRDYHTTQVPDSAGKVVYRTRREELIRGKARLGTILSSR 111 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 EY CD+ VA+ +A + + + +LKP + YLGR+SCPL PL Sbjct 112 EYRCDSMALVAVRANANAPFTLETIREKLLKPAFLLYLGRKSCPLAAPL 160 >ref|YP_003189273.1| CRISPR-associated protein Cas5 [Acetobacter pasteurianus IFO 3283-01] dbj|BAI00894.1| CRISPR-associated protein Cas5 [Acetobacter pasteurianus IFO 3283-01] dbj|BAI03942.1| CRISPR-associated protein Cas5 [Acetobacter pasteurianus IFO 3283-03] 6 more sequence titles Length=259 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 99/219 (45%), Gaps = 25/219 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M +L + PM ++G + R P RS +LGL+GACLGI R D S AL+E Sbjct 1 MGHFLTFAMVAPMASFGTLSVGERRDGEDRPARSAVLGLVGACLGITRKDVSGQNALAEE 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGA--REDYR-GLKSHE---------TIQTWR 108 AV C S L DYHT A R ++R ++ E TI + R Sbjct 61 YGLAVLC--------HASGHVLTDYHTAQTAPSRRNWRPTTRAQELADAPGELATILSRR 112 Query 109 EYLCDASFTVALWL---TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 +Y + + A+W+ T H ++ +E+ A+ P +TP LGR++CPL PL ++ Sbjct 113 DYRIGSWYLGAIWVRGSTSHWSL--AEVRDAMQHPVFTPSLGRKACPLGLPLAPELAESE 170 Query 166 DPQKALLNYEPVGGDIYSEESVTGHHLKFTARDEPMITL 204 ALL + G + + + R+ P TL Sbjct 171 CAVSALLARQTNGPESQVHNRSGLFRNQLSKRNTPTETL 209 >ref|ZP_03310304.1| hypothetical protein DESPIG_00187 [Desulfovibrio piger ATCC 29098] gb|EEB34864.1| hypothetical protein DESPIG_00187 [Desulfovibrio piger ATCC 29098] Length=225 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 106/227 (46%), Gaps = 17/227 (7%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L +RL GP+QAWG + R T P+RS + G+L A LG+ R T L E Sbjct 8 LAIRLEGPLQAWGSASQYNRRLTDLLPSRSAVTGMLCAALGLGRGSTEETDFLREMT--G 65 Query 65 VRCDELILDDR----RVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 VR +++ R + V L DYHTV + GLK T R+YL DA+F V L Sbjct 66 VRMLAVVVPRRMGGTALPVRRLEDYHTVQDTAKADGGLKDCHI--TRRQYLLDAAFRVFL 123 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVG-- 178 + ++ + A+ P + +LGR+SC T P+F G +D Q A+ P G Sbjct 124 ---SGSRALLEKAGAALQDPVWGLWLGRKSCIPTAPVFAGI--FADEQAAIAACVPEGLD 178 Query 179 GDIYSEESVTGHHLKFTARDEPM--ITLPRQFASREWYVIKGGMDVS 223 G + S ++++ + D P+ + R FA R + G D S Sbjct 179 GCLRSRDALSFAEGTDSVADMPLSFASSARAFALRRVRLDHGDEDAS 225 >ref|YP_113415.1| CRISPR-associated Cas5e family protein [Methylococcus capsulatus str. Bath] gb|AAU92787.1| CRISPR-associated protein, CT1976 family [Methylococcus capsulatus str. Bath] Length=249 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 24/183 (13%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LR P+ ++G + PT +FP S L GLLG +G + D +L+AL +++A Sbjct 4 LLLRFDAPLMSFGGVMVDQHGPTEQFPGLSMLAGLLGNAMGYRHGDADALEALQARIEYA 63 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDY-------RGLKSHE---------TIQTWR 108 R D V L DYHTV +E RG H T Q +R Sbjct 64 ARWD--------VEPEALLDYHTVDLGQEKMREPGWTTRGEPEHRAGGPAAAFGTHQRYR 115 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQ 168 Y + T+A+ L T + +L A+++P +LGR++C PL G +A + Sbjct 116 HYWANGVMTLAITLKDAGTPNLDDLAAAIVQPARPLFLGRKTCLPAAPLLAGRVEAENVL 175 Query 169 KAL 171 +AL Sbjct 176 EAL 178 >ref|ZP_07190554.1| CRISPR-associated protein Cas5 [Escherichia coli MS 69-1] gb|EFJ78689.1| CRISPR-associated protein Cas5 [Escherichia coli MS 69-1] Length=248 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L++ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQEGLRHPVFPLYLGRKS 153 >ref|YP_002404022.1| hypothetical protein EC55989_3030 [Escherichia coli 55989] emb|CAU98912.1| conserved hypothetical protein [Escherichia coli 55989] Length=248 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ + I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKS 153 >ref|YP_311742.1| putative cytoplasmic protein [Shigella sonnei Ss046] ref|ZP_03046079.1| CRISPR-associated protein Cas5 [Escherichia coli E22] ref|ZP_03050575.1| CRISPR-associated protein Cas5 [Escherichia coli E110019] 16 more sequence titles Length=248 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ + I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKS 153 >gb|EGB42475.1| CRISPR-associated protein [Escherichia coli H120] Length=248 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ + I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKS 153 >ref|ZP_05861273.1| CRISPR-associated protein Cas5, Ecoli subtype [Jonquetella anthropi E3_33 E1] gb|EEX47614.1| CRISPR-associated protein Cas5, Ecoli subtype [Jonquetella anthropi E3_33 E1] Length=243 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 11/176 (6%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 +L+LR GPM ++G + RP RFP S + GL+ LG +T LQAL + + Sbjct 3 FLVLRFRGPMMSFGDVAVDEQRPIDRFPGVSMVTGLVANALGWDWSETEKLQALQDRLVL 62 Query 64 AVRCD---ELILDDRRVSV---TGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFT 117 AVR D E + + + V++ +GL H++ + R L T+Q + Y ++ T Sbjct 63 AVREDRAGERLREYQTVALPGKSGLFVTHSIPCS----RNLDKPMTVQKYLSYWANSLIT 118 Query 118 VALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTC-QASDPQKALL 172 + LT T + E+ A+ KP +LGR++C T P+F G A P++A+L Sbjct 119 CFIALTGLGTPTLDEIACALKKPARPLFLGRKTCLPTEPVFRGEIFGAESPEEAVL 174 >ref|YP_003235838.1| hypothetical protein ECO111_3481 [Escherichia coli O111:H- str. 11128] dbj|BAI37287.1| conserved predicted protein [Escherichia coli O111:H- str. 11128] gb|EFZ65736.1| CRISPR-associated protein Cas5 domain protein [Escherichia coli 1180] Length=248 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGGDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ + I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKS 153 >ref|ZP_08292605.1| CRISPR system CASCADE complex protein CasD [Actinomyces sp. oral taxon 170 str. F0386] gb|EGF57388.1| CRISPR system CASCADE complex protein CasD [Actinomyces sp. oral taxon 170 str. F0386] Length=238 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 22/164 (13%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 + L+LRLAGP+QAWG + R T PTRSG++G+L A +G +R T ++ L S++ Sbjct 2 TVLLLRLAGPLQAWGVKSRFTVRSTELAPTRSGIIGMLSAAIGRRR--TDPIEDLL-SLR 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQ-TWREYLCDASFTVALW 121 F VR D+ RV +RD+HT R L +++ + R YL DA F + Sbjct 59 FGVRKDQ----PGRV----IRDFHTA-------RSLDGKDSMPLSNRYYLADAVFLAGI- 102 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 ++ +++A+ P + YLGRRSCP T P+ LG A+ Sbjct 103 --EGDRPLLEGIDEALHHPAFPLYLGRRSCPPTPPVSLGLRDAA 144 >ref|YP_002388217.1| hypothetical protein ECIAI1_2860 [Escherichia coli IAI1] emb|CAQ99681.1| conserved hypothetical protein [Escherichia coli IAI1] gb|EGC13891.1| CRISPR protein [Escherichia coli E1167] Length=248 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ + I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTTDAPYSLEQLQDGLRHPVFPLYLGRKS 153 >ref|ZP_08241299.1| CRISPR-associated protein cas5 [Atopobium vaginae DSM 15829] gb|EGF23577.1| CRISPR-associated protein cas5 [Atopobium vaginae DSM 15829] Length=281 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 18/176 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDD--TSSLQALS 58 M+S L+L+ AGP+Q+WG + TR T +P++S ++G++ A G +R++ + L+ L+ Sbjct 1 MKS-LLLKFAGPLQSWGTSSHFETRHTDYYPSKSAVIGMIAAAFGYKRNEPHDADLKQLN 59 Query 59 ESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTV 118 E + FAVR D+ L+DYH + +++ T R L DA F V Sbjct 60 E-LAFAVRIDQ--------QGNLLKDYHIASKCKPTGEFDRNYVTN---RYCLEDAVFLV 107 Query 119 ALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNY 174 A L + ++ ++E+A+ P + LGRRS PL++ +G Q DP L Y Sbjct 108 A--LGSEDSFLLEKIEQALAAPYFQLCLGRRSFPLSYDFIIGM-QEEDPFALLRAY 160 >ref|ZP_05433323.1| putative cytoplasmic protein [Shigella sp. D9] ref|ZP_08392992.1| crispr-associated protein cas5 [Shigella sp. D9] gb|EGJ06277.1| crispr-associated protein cas5 [Shigella sp. D9] Length=248 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKS 153 >gb|EBF86743.1| hypothetical protein GOS_9527715 [marine metagenome] Length=157 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 6/150 (4%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L L L GP+Q+WG + R T PTRSG LG++ A +GI + D S LS+ Sbjct 7 LALLLDGPLQSWGFASRFDRRTTALHPTRSGTLGMIAAAMGIDKFDESEAMRLSQFDALR 66 Query 65 VRCDELILDD---RRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALW 121 V L D R+ + + DYHT+ G R + T+Q++R YL DA F + Sbjct 67 VTTVSLGRQDPRGHRLPMRRIEDYHTIQGIRRASGKVDPTGTVQSYRHYLQDARFGL--- 123 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSC 151 L ++ + A+ P++ +LGR+SC Sbjct 124 LIEGPQSLLETIASALKDPKWGVWLGRKSC 153 >ref|YP_001229612.1| CRISPR-associated Cas5 family protein [Geobacter uraniireducens Rf4] gb|ABQ25039.1| CRISPR-associated protein, Cas5e family [Geobacter uraniireducens Rf4] Length=231 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%) Query 2 RSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESV 61 +S+L LRL GP+Q+WG + R TG PT+S + G+ A LG R + L V Sbjct 10 KSFLALRLEGPLQSWGFDSQYNRRNTGLMPTKSAIAGMCCAALGFLRGCDKEQEFL---V 66 Query 62 QF-AVRCDELIL----DDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASF 116 F AVR + + + + V L+DYHTV R G +++ + T R+YL DA+F Sbjct 67 AFGAVRMTAIAIPRNGAKKELPVRRLQDYHTVQNTRR-ASGAINNDCVLTHRQYLTDAAF 125 Query 117 TVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASD 166 V L + ++ ++ A+ P + +LGR++C T P+ G + D Sbjct 126 GV---LLEGDSTLLKQIAAALENPVWGVWLGRKTCIPTAPVLAGLRENRD 172 >ref|ZP_03917749.1| CRISPR-associated protein [Corynebacterium glucuronolyticum ATCC 51867] gb|EEI27969.1| CRISPR-associated protein [Corynebacterium glucuronolyticum ATCC 51867] Length=235 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 19/176 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M L+L L GPMQ+WG + +R T PT+SG++GL+ A G +R D L+ L++ Sbjct 1 MTHSLLLLLKGPMQSWGDSSRYKSRETAAVPTKSGIVGLIAAAQGRRRSDP--LEDLAQ- 57 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 ++ AVR D+ T LRDY T + ++ + R YL DA+F A Sbjct 58 LRLAVRVDQ--------PGTLLRDYQTA----QQWQVKEGASAQLVTRYYLSDAAFVAA- 104 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEP 176 + ++ + +++ +PR+ +LGRRSCP L LG + +D +AL++ EP Sbjct 105 -VESEDRELLEAMAESLRRPRFPLFLGRRSCPAPPNLVLG-IRDTDVVQALVD-EP 157 >ref|ZP_06265842.1| crispr-associated protein Cas5 [Pyramidobacter piscolens W5455] gb|EFB90859.1| crispr-associated protein Cas5 [Pyramidobacter piscolens W5455] Length=269 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 97/226 (42%), Gaps = 36/226 (15%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 LILRL GP+ A+G + RPT P S + GL+ LG D LQ L E ++ A Sbjct 4 LILRLRGPLMAFGDVAVDEIRPTDLLPGLSEMTGLIANALGWTFQDVEKLQRLQERLRLA 63 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGARED--YR----------GLKSHETIQTWREYLC 112 R D R V LRDY T + ED +R G K T+Q +R Y Sbjct 64 SRED-------RTGVP-LRDYQTARLSSEDSLWRTDGIVAERGGGSKGEFTVQRYRHYRA 115 Query 113 DASFTVALWLTP-HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKAL 171 DA+ TV + L P + E+ A+ P ++GR CP + P+ C Sbjct 116 DAAVTVLIALDPADEAPALEEIRDALRHPARPLFIGRIGCPPSQPI----C--------- 162 Query 172 LNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIK 217 +EP G +I +S+ + T R R+ ASR +++ Sbjct 163 --FEPEGREIIHTDSLKDAIMHITPRAPLGAQTKREPASRNKVLVE 206 >ref|ZP_06159640.1| CRISPR-associated protein Cas5 [Slackia exigua ATCC 700122] gb|EEZ61812.1| CRISPR-associated protein Cas5 [Slackia exigua ATCC 700122] Length=267 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 89/161 (55%), Gaps = 17/161 (10%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 + L+L+LA P+Q+WG + R T P++SG++GLL A LG +R+D+ A +++ Sbjct 5 TVLLLKLAAPLQSWGASSRFTERTTRHEPSKSGVIGLLAAALGRRREDSVDDLA---ALR 61 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAR--EDYRGLKSHETIQ-TWREYLCDASFTVA 119 FAVR D+ + +RD+ T + D R +E++ + R+YL DA F A Sbjct 62 FAVRIDQ--------PGSFMRDFQTEHTRKWDSDTRRFVFNESLSLSKRDYLSDAVFVAA 113 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 L +++E +A+ P + +LGRRSCP + ++LG Sbjct 114 L---EGDEDLLAECAEALHHPAFPLFLGRRSCPPSTQVYLG 151 >ref|ZP_07124417.1| CRISPR-associated protein Cas5 [Escherichia coli MS 84-1] ref|ZP_07212250.1| CRISPR-associated protein Cas5 [Escherichia coli MS 124-1] gb|EFJ85029.1| CRISPR-associated protein Cas5 [Escherichia coli MS 84-1] gb|EFK66366.1| CRISPR-associated protein Cas5 [Escherichia coli MS 124-1] gb|EFU34514.1| CRISPR-associated protein Cas5 [Escherichia coli MS 85-1] gb|EFZ68689.1| CRISPR-associated protein Cas5 domain protein [Escherichia coli 1357] Length=248 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 72/161 (44%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHT+ RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTIQMPKEVRKARYFSRREELSDPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKS 153 >gb|AEA31975.1| CRISPR-associated protein [Lactobacillus amylovorus GRL1118] Length=231 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 21/149 (14%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 + +RLA P+Q++G R T +PT+S ++G+L A LG +RDD+ Q ++Q A Sbjct 4 ITIRLASPLQSFGNEATFSHRTTELYPTKSLIVGMLAASLGYRRDDSRINQL--NNLQIA 61 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D+ L D+ TV + D R L T+R YL D F VA ++ Sbjct 62 VRIDQ--------PGKVLTDFQTV-EFKPDTRKL-------TYRNYLQDGVFIVA--ISA 103 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPL 153 H I +L+ A+L P++ Y+GRRS P+ Sbjct 104 H-DKTIDKLKYALLHPKFQLYIGRRSNPI 131 >ref|ZP_06658642.1| CRISPR-associated protein cas5 [Escherichia coli B185] gb|EFF05173.1| CRISPR-associated protein cas5 [Escherichia coli B185] Length=248 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 72/161 (44%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHT+ RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTIQMPKEVRKARYFSRREELSDSDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQGGLRHPVFPLYLGRKS 153 >ref|YP_003373987.1| CRISPR system CASCADE complex protein CasD [Gardnerella vaginalis 409-05] gb|ADB14481.1| CRISPR system CASCADE complex protein CasD [Gardnerella vaginalis 409-05] Length=291 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 16/176 (9%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSE 59 M+S L+L+ +GP+Q+WG + TR T +P++S ++G++ A G +R D A Sbjct 1 MKS-LLLKFSGPLQSWGTDSHFETRHTDYYPSKSAVIGMIAAAFGYRRSTDCDENIAKLN 59 Query 60 SVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVA 119 + FAVR D+ LRDYH + A+ G + T R YL DA F VA Sbjct 60 DLDFAVRIDQ--------QGNLLRDYH--IAAKYKANG-DFEKNYVTNRYYLEDAIFLVA 108 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 + + +I ++ A+ P + LGRRS P T LG Q ALL +E Sbjct 109 --IGSNNEQLIYDISNALRSPYFQSSLGRRSLPPTADFILGVEDCGVIQ-ALLTHE 161 >ref|YP_001801360.1| CRISPR-associated protein [Corynebacterium urealyticum DSM 7109] emb|CAQ05926.1| CRISPR-associated protein [Corynebacterium urealyticum DSM 7109] Length=240 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 18/175 (10%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M L+L L GPMQ+WG + R T PT+SG++GL+ A G +R T ++ L++ Sbjct 1 MAHSLLLLLKGPMQSWGDESRFSVRATATTPTKSGIVGLIAAAQGRRR--TDGVEDLAK- 57 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 ++ AVR D+ S + LRDY T A+ + ++ ++ T R +L DA+F A Sbjct 58 LRMAVRVDQ--------SGSLLRDYQT---AQPWLKNPGANASLVT-RYFLSDAAFVAA- 104 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 + ++ ++ +A+ +P Y Y+GRRSCP+ L +G D + AL ++ Sbjct 105 -VESEDRELLDQMAEALRRPAYPLYMGRRSCPVHPGLVIGVVDG-DAESALRAHD 157 >ref|YP_004404948.1| CRISPR-associated Cas5 family protein [Verrucosispora maris AB-18-032] gb|AEB44348.1| CRISPR-associated Cas5 family protein [Verrucosispora maris AB-18-032] Length=233 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 22/160 (13%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S L+L+LAGP+Q+WG + R T PT+SG++GLL A G++R T L L +Q Sbjct 2 SVLLLKLAGPLQSWGSSSRFARRGTEIAPTKSGVIGLLAAAKGMRR--TEPLTDLL-GLQ 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQ-TWREYLCDASFTVALW 121 F VR D+ LRD+ T R L + T+R YL DA F A+ Sbjct 59 FGVRLDQ--------PGQILRDFQTA-------RSLDGRRSAPLTYRFYLSDAVFLAAV- 102 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGT 161 +++ L +A+ +P++ YLGRRSCP P+ LG Sbjct 103 --SGDRTLLTGLAEALDRPQFPLYLGRRSCPPAGPINLGV 140 >ref|ZP_07100694.1| CRISPR-associated protein Cas5 [Escherichia coli MS 119-7] ref|ZP_08370343.1| CRISPR-associated protein Cas5 [Escherichia coli TA271] ref|ZP_08379414.1| CRISPR-associated protein Cas5 [Escherichia coli H591] gb|EFK47876.1| CRISPR-associated protein Cas5 [Escherichia coli MS 119-7] gb|EGI35078.1| CRISPR-associated protein Cas5 [Escherichia coli TA271] gb|EGI44891.1| CRISPR-associated protein Cas5 [Escherichia coli H591] Length=248 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 72/161 (44%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHT+ RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTIQMPKEVRKARYFSRREELSDPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQGGLRHPVFPLYLGRKS 153 >ref|YP_001744909.1| CRISPR-associated Cas5 family protein [Escherichia coli SMS-3-5] gb|ACB16370.1| CRISPR-associated protein Cas5 [Escherichia coli SMS-3-5] Length=248 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R + P+RS LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAGVGIRRDDTECLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L++ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQEGLRHPVFPLYLGRKS 153 >ref|ZP_05752899.1| CRISPR-associated protein [Lactobacillus helveticus DSM 20075] gb|EEW67652.1| CRISPR-associated protein [Lactobacillus helveticus DSM 20075] Length=241 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 16/165 (9%) Query 7 LRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVR 66 +RL P+Q++G R + +P++S ++G++ A LG +RDD LQ ++ FAVR Sbjct 6 IRLTAPLQSYGNQASFNQRTSDNYPSKSAVIGIIAAALGYRRDDARILQL--NNLLFAVR 63 Query 67 CDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHA 126 ++ S + ++ TV + + + T+RE++ DA F VA + Sbjct 64 IEQ--------SGNMMTEFQTVEYQKSSTKTARKL----TYREFIQDAVFMVA--IGSDN 109 Query 127 TMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKAL 171 I ++ A+ P++ YLGRRS P PL + T +P + L Sbjct 110 DHEIEKIVSALKHPKFQLYLGRRSNPPAGPLMIETYDEENPLQVL 154 >ref|ZP_08552813.1| CRISPR-associated Cas5e family protein [Salinisphaera shabanensis E1L3A] ref|ZP_08553184.1| CRISPR-associated Cas5e family protein [Salinisphaera shabanensis E1L3A] gb|EGM28400.1| CRISPR-associated Cas5e family protein [Salinisphaera shabanensis E1L3A] gb|EGM29206.1| CRISPR-associated Cas5e family protein [Salinisphaera shabanensis E1L3A] Length=224 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 14/157 (8%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 + L++RLAGPMQ+WG + R T P++SG+LGL+ A LG RD T + L+ +++ Sbjct 2 ATLLMRLAGPMQSWGTTSRFDERDTQLEPSKSGVLGLVCAALG--RDRTEPVADLA-ALR 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWL 122 VR D R V +RDYHT G ++ T+ + R YL DA F VAL Sbjct 59 MGVRVD-------REGVP-MRDYHTATGVVASSGKTDANRTVVSQRYYLSDAVFLVAL-- 108 Query 123 TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFL 159 +++++ A+ P + LGR+S + P+F+ Sbjct 109 -EGERELLAQIHDALRAPNWPLCLGRKSFVPSRPVFM 144 >ref|ZP_06897601.1| CRISPR-associated protein cas5 [Roseomonas cervicalis ATCC 49957] gb|EFH10699.1| CRISPR-associated protein cas5 [Roseomonas cervicalis ATCC 49957] Length=249 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 21/166 (12%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 +L L PM ++G P R + P RS +LGL+GACLG++R+D ++ L+ Sbjct 5 FLTFALVAPMASFGAPAVGERRESWSRPGRSAILGLVGACLGLEREDDAAQATLAAEYGL 64 Query 64 AVRCDELILDDRRVSV-TGLRDYHTVL---GAREDYRGLKSHE-------TIQTWREYLC 112 A+ C VS T DYHT +R+ ++ E TI + R+Y Sbjct 65 ALLC---------VSAGTPFADYHTAQVPSSSRKIRHATRAAELAAPELNTILSRRDYRT 115 Query 113 DASFTVALWLT-PHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 ALW P ++E+ A+ P +T YLGR+SCPL PL Sbjct 116 GTWHLAALWARGPAPRWPLAEIAAAMQSPAFTTYLGRKSCPLGLPL 161 >ref|YP_002355868.1| CRISPR-associated protein Cas5 family [Thauera sp. MZ1T] gb|ACK54972.1| CRISPR-associated protein Cas5 family [Thauera sp. MZ1T] Length=243 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 13/193 (6%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M ++L++RL GP+ A+G T + FP +S L GL+ LG +R+D + L Sbjct 1 MANHLLIRLEGPLMAFGGETIDNIGVIRDFPAQSMLTGLIANALGWRREDAGAHDRLQAR 60 Query 61 VQFAVRCDEL--ILDDRRVSVTGLRDYHTVLG----ARE---DYRGLKSHE---TIQTWR 108 V F R D + + + ++ G+ D G RE YR ++ + T+Q +R Sbjct 61 VVFGARLDRAGSRMREYQTALLGMNDSGWTTGGLPEGREQSPSYRADRAGKKVLTLQRYR 120 Query 109 EYLCDASFTVALWLTP-HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDP 167 ++ DA+ VAL L P + T + + A+ +P +LGR+ C PLF G A D Sbjct 121 DHHTDAAVLVALRLEPANETPTLDAVANALQRPARPLFLGRKPCLPAAPLFAGWIDAPDV 180 Query 168 QKALLNYEPVGGD 180 AL + P+ + Sbjct 181 LTALRDAVPLAAN 193 >ref|ZP_04414159.1| CRISPR-associated protein CT1976 [Vibrio cholerae bv. albensis VL426] gb|EEO03352.1| CRISPR-associated protein CT1976 [Vibrio cholerae bv. albensis VL426] Length=238 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 18/180 (10%) Query 2 RSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESV 61 +YL+L L GP+QAWG + G R T FPTRSG+LGLL G + L+ +S Sbjct 5 NAYLLLWLEGPLQAWGHDSKFGVRNTLNFPTRSGILGLLCCARGAGGEQREWLEKMSPMA 64 Query 62 QFAVRCDELILDDRRVSVTG-LRDYHTVLGARED---YRGLKSHETIQ-----------T 106 + D + + LRD+H V +D ++ L +T Q T Sbjct 65 MEVLAFDRSDAEGEPIMREATLRDFHMVGSGYDDADPWQNLLIPKTAQGKKPNGAGTKMT 124 Query 107 WREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASD 166 +R YL DA F V L + LE A+ PR+ YLGR++C T ++ G +++ Sbjct 125 YRYYLQDALFAVILEIPADEK---EALEDALQNPRWDLYLGRKNCVPTELIYQGIYHSTE 181 >ref|ZP_06976626.1| hypothetical protein GV51_0907 [Gardnerella vaginalis 5-1] gb|EFH72080.1| hypothetical protein GV51_0907 [Gardnerella vaginalis 5-1] Length=291 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 16/176 (9%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSE 59 M+S L+L+ AGP+Q+WG + TR T +P++S ++G++ A G +R D A Sbjct 1 MKS-LLLKFAGPLQSWGTDSHFETRHTDYYPSKSAVIGMISAAFGYRRTTDCDEEIAKLN 59 Query 60 SVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVA 119 + FAVR D+ LRDYH + + K++ T R YL DA F VA Sbjct 60 DLDFAVRIDQ--------QGNLLRDYHIAAKYKPNGDFEKNY---VTNRYYLEDAIFLVA 108 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 + + +I + A+ P + LGRRS P T LG Q ALL +E Sbjct 109 --IGSNNEQLIYSINDALRSPYFQSSLGRRSLPPTADFILGVEDCGVIQ-ALLTHE 161 >ref|ZP_07665798.1| CRISPR system CASCADE complex protein CasD [Gardnerella vaginalis ATCC 14018] ref|YP_003985779.1| CRISPR-associated protein cas5 [Gardnerella vaginalis ATCC 14019] gb|ADP38756.1| CRISPR-associated protein cas5 [Gardnerella vaginalis ATCC 14019] Length=291 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 16/176 (9%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSE 59 M+S L+L+ +GP+Q+WG + TR T +P++S ++G++ A G +R D A Sbjct 1 MKS-LLLKFSGPLQSWGTDSHFETRHTDYYPSKSAVVGMIAAAFGYRRSADCDEAIAKLN 59 Query 60 SVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVA 119 + FAVR D+ LRDYH + A+ G + T R YL DA F VA Sbjct 60 DLDFAVRIDQ--------QGNLLRDYH--IAAKYKSNG-DFEKNYVTNRYYLEDAIFLVA 108 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 + +I + A+ P + LGRRS P T LG Q ALL +E Sbjct 109 --IGSDNEQLIYSINDALRSPYFQSSLGRRSLPPTADFILGVEDCGVIQ-ALLTHE 161 >ref|YP_002413771.1| hypothetical protein ECUMN_3084 [Escherichia coli UMN026] ref|ZP_06650175.1| conserved hypothetical protein [Escherichia coli FVEC1412] ref|ZP_06991582.1| conserved hypothetical protein [Escherichia coli FVEC1302] ref|ZP_07115215.1| CRISPR-associated protein Cas5 [Escherichia coli MS 198-1] emb|CAR14251.1| conserved hypothetical protein [Escherichia coli UMN026] gb|EFE99287.1| conserved hypothetical protein [Escherichia coli FVEC1412] gb|EFI18641.1| conserved hypothetical protein [Escherichia coli FVEC1302] gb|EFJ75317.1| CRISPR-associated protein Cas5 [Escherichia coli MS 198-1] Length=248 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 71/161 (44%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+RS LLGLL A +GI+RDDT L + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNVFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHT+ RE+ I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTIQMPKEVRKARYFSRREELSDPDLLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQGGLRHPVFPLYLGRKS 153 >ref|YP_001218553.1| CRISPR-associated protein Cas5, ecoli subtype [Vibrio cholerae O395] ref|ZP_06035695.1| CRISPR-associated protein [Vibrio cholerae RC27] gb|ABQ20596.1| crispr-associated protein Cas5, ecoli subtype [Vibrio cholerae O395] gb|ACP08349.1| hypothetical protein VC395_0326 [Vibrio cholerae O395] gb|EEY42231.1| CRISPR-associated protein [Vibrio cholerae RC27] Length=238 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 88/185 (47%), Gaps = 28/185 (15%) Query 2 RSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGI---QRDDTSSLQALS 58 +YL+L L GP+QAWG + G R T FPTRSG+LGLL G QR+ + ++ Sbjct 5 NAYLLLWLEGPLQAWGHDSKFGVRNTLNFPTRSGILGLLCCARGAGGEQREWLEKMSPMA 64 Query 59 ESVQFAVRCD---ELILDDRRVSVTGLRDYHTVLGARED---YRGLKSHETIQ------- 105 V R D E I+ + LRD+H V +D ++ L +T Q Sbjct 65 MEVLAFERSDAEGEPIMRE-----ATLRDFHMVGSGYDDADPWQNLLIPKTAQGKKPNGA 119 Query 106 ----TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGT 161 T+R YL DA F V L + LE A+ PR+ YLGR++C T ++ G Sbjct 120 GTKMTYRYYLQDALFAVILEIPADDK---EALEDALQNPRWDLYLGRKNCVPTELIYQGV 176 Query 162 CQASD 166 +++ Sbjct 177 YHSTE 181 >ref|YP_004049617.1| CRISPR-associated protein Cas5 family [Oceanithermus profundus DSM 14977] gb|ADR37697.1| CRISPR-associated protein Cas5 family [Oceanithermus profundus DSM 14977] Length=219 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 78/158 (49%), Gaps = 20/158 (12%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSESVQF 63 L+++L GPMQ+W RPT PT+SG++GLL LG R D + L AL + Sbjct 4 LLVQLYGPMQSWRTGPRLERRPTQPLPTKSGVIGLLAGALGRPRGSDIADLTAL----RM 59 Query 64 AVRCDELILDDRRVSVTGLRDYHTVLG-AREDYRGLKSHETIQTWREYLCDASFTVALWL 122 VR D R V + DY TV + RGLK QTWR YL DA+F V L Sbjct 60 GVRVD-------RPGVLEV-DYQTVKNVVQAKGRGLKDA---QTWRTYLADAAFLVGLE- 107 Query 123 TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 + EL +A+ P + PYLG++ PL+ G Sbjct 108 --GERAPLKELAQALQAPHFVPYLGQKGFYPAAPLYRG 143 >gb|EGL13343.1| CRISPR system CASCADE complex protein CasD [Gardnerella vaginalis 315-A] Length=291 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 16/176 (9%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSE 59 M+S L+L+ +GP+Q+WG + TR T +P++S ++G++ A G +R D A Sbjct 1 MKS-LLLKFSGPLQSWGTDSHFETRHTDYYPSKSAVVGMIAAAFGYRRSADCDEAIAKLN 59 Query 60 SVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVA 119 + FAVR D+ LRDYH + A+ G + T R YL DA F VA Sbjct 60 DLDFAVRIDQ--------QGNLLRDYH--IAAKYKSNG-DFEKNYVTNRYYLEDAIFLVA 108 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 + +I + A+ P + LGRRS P T LG Q ALL +E Sbjct 109 --IGSDNEQLIYSINDALRSPYFQSSLGRRSLPPTADFILGVEDCGVIQ-ALLTHE 161 >ref|YP_003601682.1| CRISPR-associated protein, cas5e-type [Lactobacillus crispatus ST1] emb|CBL50657.1| CRISPR-associated protein, Cas5e-type [Lactobacillus crispatus ST1] Length=241 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 17/166 (10%) Query 7 LRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVR 66 +RL P+Q++G R + +PT+S ++G++ A LG R+D + L+ ++ FAVR Sbjct 6 IRLTAPLQSYGNSASFNQRTSDSYPTKSAIVGMIAAALGYSREDNEKILELN-NLLFAVR 64 Query 67 CDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQ-TWREYLCDASFTVALWLTPH 125 ++ S L ++ TV +YR S + T+R+++ D F VA + Sbjct 65 IEQ--------SGKMLTEFQTV-----EYRKSASKTARKLTYRDFIQDGVFMVA--IGSD 109 Query 126 ATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKAL 171 +I +++A+ P++ YLGRRS P PL + +P + L Sbjct 110 DDQLIENIKEALEHPKFQLYLGRRSNPPAGPLKIDIFNGRNPLQVL 155 >ref|ZP_08516286.1| CRISPR-associated Cas5 family protein [Corynebacterium bovis DSM 20582] Length=235 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/153 (38%), Positives = 79/153 (51%), Gaps = 20/153 (13%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 LIL L GP+QAWG R T R PT+SG++GLL A G R T SL L ++ F Sbjct 7 LILALDGPLQAWGASGRFEYRTTERAPTKSGVVGLLAAAQG--RSRTDSLDDLL-TLSFG 63 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D+ RV RD+ T D+R K H ++R+YL D FT + Sbjct 64 VRTDQ----QGRVG----RDFQT----ETDWRTGKRHPL--SYRDYLQDYKFTA---VVE 106 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 V+ EL+ A+ PR+ +LGRR+CP P+ Sbjct 107 GERDVLEELQAALRAPRFPLFLGRRACPPAAPV 139 >ref|ZP_06050695.1| CRISPR-associated protein [Vibrio cholerae CT 5369-93] gb|EEY50178.1| CRISPR-associated protein [Vibrio cholerae CT 5369-93] Length=238 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 88/185 (47%), Gaps = 28/185 (15%) Query 2 RSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGI---QRDDTSSLQALS 58 +YL+L L GP+QAWG + G R T FPTRSG+LGLL G QR+ + ++ Sbjct 5 NAYLLLWLEGPLQAWGHDSKFGVRNTLNFPTRSGILGLLCCARGAGGEQREWLERMSPMA 64 Query 59 ESVQFAVRCD---ELILDDRRVSVTGLRDYHTVLGARED---YRGLKSHETIQ------- 105 V R D E I+ + LRD+H V +D ++ L +T Q Sbjct 65 MEVLAFERSDAEGEPIMRE-----ATLRDFHMVGSGYDDADPWQNLLIPKTAQGKKPNGA 119 Query 106 ----TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGT 161 T+R YL DA F V L + LE A+ PR+ YLGR++C T ++ G Sbjct 120 GTKMTYRYYLQDALFAVILEILADDK---EALEDALQNPRWDLYLGRKNCVPTELIYQGV 176 Query 162 CQASD 166 +++ Sbjct 177 YHSTE 181 >ref|ZP_04690886.1| CRISPR-associated protein, CT1976 [Streptomyces ghanaensis ATCC 14672] Length=244 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 13/153 (8%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L++ PMQ+WG + +R T PT+SG++GLL A LGI RD +Q L+E ++ Sbjct 4 LLMCFDAPMQSWGTRSQFASRDTATEPTKSGVVGLLAAALGIPRDADEEIQNLAE-LRMG 62 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR DR V D+HTV + G K+H T T R YL DA F V + Sbjct 63 VRV------DREGVVEA--DFHTVQNV-PNTEG-KNHRTAVTKRFYLADALFLVG--VES 110 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 T ++ +L A+ PR+ Y GR++ P+ Sbjct 111 DDTQLLHQLHTALTAPRWPLYFGRKAFVPARPI 143 >emb|CAH18540.1| hypothetical protein [Streptoalloteichus tenebrarius] Length=281 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 93/193 (48%), Gaps = 39/193 (20%) Query 2 RSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDT-SSLQALSES 60 ++ L+LRLAGP+Q+WG + R T PT+SG++GLL A G R ++ + L AL Sbjct 14 QAVLLLRLAGPLQSWGDRSAFNRRDTRPEPTKSGIIGLLAAAEGRPRGESVADLTAL--- 70 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLK------SHETIQ--------- 105 + VR D+ + LRDYHTV DYRG S + +Q Sbjct 71 -RLGVRVDQ--------AGRLLRDYHTV----SDYRGGPLPQAGVSAKGVQKPTSPPKFT 117 Query 106 --TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ 163 T R YL DA F L ++ L+ AV +P + LGRRSC T P+ LG + Sbjct 118 HVTTRFYLEDAVFVAGLA---GPRDLLERLDSAVRRPAFPLALGRRSCVPTQPVSLGLRE 174 Query 164 ASDPQKALLNYEP 176 S + +L EP Sbjct 175 GS--LRTVLANEP 185 >ref|ZP_06927475.1| hypothetical protein GVAMD_0134 [Gardnerella vaginalis AMD] gb|EFH27036.1| hypothetical protein GVAMD_0134 [Gardnerella vaginalis AMD] Length=291 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 16/176 (9%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSE 59 M+S L+L+ +GP+Q+WG + TR T +P++S ++G++ A G +R D A Sbjct 1 MKS-LLLKFSGPLQSWGTDSHFETRHTDYYPSKSAVVGMIAAAFGYRRSADCDEEIAKLN 59 Query 60 SVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVA 119 + FAVR D+ LRDYH + + K++ T R YL DA F VA Sbjct 60 DLDFAVRIDQ--------QGNLLRDYHIAAKYKPNGDFEKNY---VTNRYYLEDAIFLVA 108 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYE 175 + +I + A+ P + LGRRS P T LG Q ALL +E Sbjct 109 --IGSDNEQLIQSINDALHSPYFQSSLGRRSLPPTADFILGVEDCGVIQ-ALLTHE 161 >ref|ZP_08231100.1| CRISPR-associated protein cas5 family protein [Actinomyces viscosus C505] gb|EGE38849.1| CRISPR-associated protein cas5 family protein [Actinomyces viscosus C505] Length=239 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 22/166 (13%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M + L+LRLAGP+QAWG + R T P++SG++G+L A +G +R T ++ L S Sbjct 1 MMTVLLLRLAGPLQAWGVKSRFTVRSTELEPSKSGIIGMLAAAVGRRR--TDPIEDLL-S 57 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQ-TWREYLCDASFTVA 119 ++F VR D+ RV +RD+HT L +++ + R YL DA F Sbjct 58 LRFGVRKDQ----PGRV----IRDFHTA-------STLDGKDSMPLSNRYYLADAVFLAG 102 Query 120 LWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 + ++ +++A+ P + YLGRRSCP T P+ LG +A+ Sbjct 103 I---EGDRPLLEGIDEALHHPAFPLYLGRRSCPPTPPVSLGLREAA 145 >ref|YP_001537409.1| CRISPR-associated Cas5 family protein [Salinispora arenicola CNS-205] gb|ABV98418.1| CRISPR-associated protein Cas5 family [Salinispora arenicola CNS-205] Length=238 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 26/160 (16%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSE--SVQ 62 L+LRLAGP+Q+WG + R T PT+SG++G+L A G++R D L+E S+ Sbjct 2 LLLRLAGPLQSWGATSRFTHRHTQVTPTKSGVIGMLAAASGLRRTD-----PLTELLSLD 56 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQ-TWREYLCDASFTVALW 121 F VR D+ LRD+ R L +++ T R YL DA F VA+ Sbjct 57 FGVRIDQ--------PGQLLRDFQVA-------RTLDGRDSMPLTNRYYLSDAVFLVAIG 101 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGT 161 ++ L ++V +P + YLGRR+CP P+ LG Sbjct 102 ---GDQALLEGLHESVRRPHFPLYLGRRACPPVAPISLGV 138 >ref|YP_004001418.1| protein [Bifidobacterium longum subsp. longum BBMN68] gb|ADQ02879.1| Hypothetical protein BBMN68_1820 [Bifidobacterium longum subsp. longum BBMN68] Length=266 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 79/158 (50%), Gaps = 26/158 (16%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S L++RLA PMQ+WG + R T +PT+SG++G++ A LGI RD+ SL+ + ++ Sbjct 2 SVLLMRLAAPMQSWGARSRFTRRETEAWPTKSGVIGIIAAALGIGRDE--SLERF-DGLR 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWL 122 F VR D+ T + DY T D L R YL DA F L Sbjct 59 FGVRVDQ--------PGTVMSDYQTARTDDGDMLPLSR-------RYYLQDAVFLAGLES 103 Query 123 TPHATMVISELEK---AVLKPRYTPYLGRRSCPLTHPL 157 T A ELE+ A+ P Y +LGRRSCP P+ Sbjct 104 TNRA-----ELERYRFALASPYYQLFLGRRSCPPDGPV 136 >ref|YP_004367834.1| CRISPR-associated protein Cas5 family [Marinithermus hydrothermalis DSM 14884] gb|AEB11724.1| CRISPR-associated protein Cas5 family [Marinithermus hydrothermalis DSM 14884] Length=221 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 18/146 (12%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSESVQF 63 L+LRL GPMQ+WG + R T +PT+SG+LGLL A LG R +D S L AL V+ Sbjct 4 LLLRLQGPMQSWGTRSRFDHRDTWPYPTKSGVLGLLAAALGRDRKEDISDLAALRMGVR- 62 Query 64 AVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLT 123 +D + V + VL A D R L+ +Q+WR YL A+F + T Sbjct 63 --------VDQKGVLKVDYQTARNVLAA--DGRALRD---VQSWRYYLSGAAFLAGVEGT 109 Query 124 PHATMVISELEKAVLKPRYTPYLGRR 149 ++ ++ +A+ PR+ YLGR+ Sbjct 110 EE---LLQQIHQALRNPRFPLYLGRK 132 >gb|EBF71287.1| hypothetical protein GOS_9552933 [marine metagenome] Length=235 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 4/166 (2%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 +L+LRL+ PM ++G + PT R+P S L GLLG LG DD + QAL + ++F Sbjct 70 WLVLRLSAPMMSFGAVAIDQVGPTARWPGSSMLTGLLGNALGWDWDDRDAHQALQDRLRF 129 Query 64 A---VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 ++ + + D + + T GA E G + R+YL DA + V L Sbjct 130 GAMEMQAGDQLTDTQNAQLGANDRGWTTRGAPEGRTGASYDAPHRRRRDYLLDADYRVVL 189 Query 121 WLTP-HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 L P A + + A+ +P +LGR+ C T PL G + + Sbjct 190 TLDPADAAPTLDVIADALDRPARPLFLGRKPCLPTRPLRAGEVRGT 235 >ref|YP_074497.1| hypothetical protein STH668 [Symbiobacterium thermophilum IAM 14863] dbj|BAD39653.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] Length=232 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 23/168 (13%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR----DDTSSLQALSE- 59 L+LRLAGPMQ+WG + R TG P++SG++G+L A LG R +D +L+E Sbjct 4 LLLRLAGPMQSWGTASRFTERDTGMEPSKSGVIGILCAALGKPREERPEDGGRWPSLAEL 63 Query 60 -SVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGL-------KSHETIQTWREYL 111 ++ VR D RV V D+ T G R R +++ +WR YL Sbjct 64 ARLRMGVRIDA----PGRVGV----DFQTAGGGRLGTRPYGVAKADGSKPDSVMSWRYYL 115 Query 112 CDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFL 159 DA+F V L A ++ L A+ +P + YLGR+S + P+FL Sbjct 116 EDAAFLVGLESGNRA--LLERLHVALREPVWPLYLGRKSYVPSSPIFL 161 >ref|ZP_06712206.1| CRISPR-associated protein cas5, subtype [Streptomyces sp. e14] gb|EFF88641.1| CRISPR-associated protein cas5, subtype [Streptomyces sp. e14] Length=265 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 83/173 (47%), Gaps = 35/173 (20%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR----DDTSSLQALSES 60 L+LRLAGP+Q+WG + R T PT+SG++GLL A G R DD ++L Sbjct 10 LLLRLAGPLQSWGDRSTFNRRETRPEPTKSGVVGLLAAAAGRSRHAAVDDLAAL------ 63 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV--------LGAREDYRGLK-----SHETIQTW 107 +R D+ + LRDYHTV L A +GL+ + T T Sbjct 64 -GLGIRIDQ--------PGSILRDYHTVSDYRGQPLLSAAVSGKGLQKPTSPAKHTHVTQ 114 Query 108 REYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 R YL DA F VA+ +I+ LE A+ P + LGRRSC PL LG Sbjct 115 RFYLQDAVFLVAVE---GPRELITTLEHALRHPAFPLALGRRSCAPAQPLALG 164 >ref|YP_002133147.1| CRISPR-associated protein Cas5 family [Anaeromyxobacter sp. K] gb|ACG72018.1| CRISPR-associated protein Cas5 family [Anaeromyxobacter sp. K] Length=246 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 89/186 (47%), Gaps = 6/186 (3%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M LILR P+ A+G + G FP S + GL+ LG D L+AL Sbjct 1 MLDALILRFDAPLLAFGGVAVDNHGEVGDFPGLSMVAGLIANALGYDHRDCDRLEALQRR 60 Query 61 VQFAVRCD---ELILDDRRVSVTG--LRDYHTVLGAREDYRGLKSHETIQTWREYLCDAS 115 ++ AVR D + ++D + V++ L T GA E G S T +R Y DA Sbjct 61 LRIAVRRDRSGQRLVDFQTVALGQPFLERGWTTRGAVEGRDGAFSDGTHIRYRAYWADAV 120 Query 116 FTVALWLTPHA-TMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNY 174 +T+A+ L P A + + +E+A+ +P +LGR++C + P+ G Q AL ++ Sbjct 121 YTLAVTLDPPAESPGLDAVERALREPERPLFLGRKACLPSVPILAGRLQIPSLLAALASF 180 Query 175 EPVGGD 180 E V D Sbjct 181 ERVSKD 186 >ref|YP_001534552.1| Cas5 family CRISPR-associated protein [Dinoroseobacter shibae DFL 12] gb|ABV94951.1| CRISPR-associated protein Cas5 family [Dinoroseobacter shibae DFL 12] Length=228 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 4/172 (2%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 +L+LRL+ PM ++G+ + + PT R+P S L GLL LG DD + LQAL + ++F Sbjct 8 WLVLRLSAPMLSFGRVSIDQVGPTARWPGSSMLTGLLANALGWDWDDRARLQALQDRLRF 67 Query 64 A---VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 +R + + D + + T GA E G + R++L DA + V L Sbjct 68 GALILREGDTLTDSQNAQLAKADRGWTTRGAPEGRAGASYDAPHRRRRDFLMDAEYRVVL 127 Query 121 WLT-PHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKAL 171 L A + + A+ +P +LGR+ C T PL G + + AL Sbjct 128 TLALAEAEPTLDRIGAALDRPARPLFLGRKPCLPTRPLRAGEVRGATVYAAL 179 >ref|YP_003289774.1| CRISPR-associated protein Cas5 family [Rhodothermus marinus DSM 4252] gb|ACY47386.1| CRISPR-associated protein Cas5 family [Rhodothermus marinus DSM 4252] Length=252 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 25/184 (13%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LR P+ ++G P + +P S + GLL LG +T+ L+ L E +++A Sbjct 4 LLLRFDAPLMSFGAPIVDQYGFIQPYPALSMMTGLLANALGYTHAETARLERLQERLRYA 63 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAR---EDYRGLKSHETIQT-------------WR 108 VR +DRR LRD+ TV ++ D R + T++T R Sbjct 64 VR------EDRRGQ--QLRDFQTVDLSQPFLHDERAWTTRGTLETRQGGTASLGIHIRLR 115 Query 109 EYLCDASFTVALWLT-PHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDP 167 +Y DA +TVAL L P +++LE+A+ P ++GR+ C PLF+G +A+D Sbjct 116 DYWADAVYTVALTLDPPDEPPTLADLEQALRFPARPLFIGRKPCLPAAPLFIGRVEAADL 175 Query 168 QKAL 171 AL Sbjct 176 LDAL 179 >ref|YP_710743.1| hypothetical protein FRAAL0456 [Frankia alni ACN14a] emb|CAJ59131.1| hypothetical protein FRAAL0456 [Frankia alni ACN14a] Length=275 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 84/173 (48%), Gaps = 37/173 (21%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSESVQF 63 L+LRLAGP+Q+WG + R T PT+SGL+GLL A G +R D L AL+ F Sbjct 9 LVLRLAGPVQSWGGGSMFNRRETLTEPTKSGLIGLLAAAEGRRRADPIEDLLALT----F 64 Query 64 AVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGL-----------------KSHETIQT 106 VR D+ T LRDYHTV DYRG + T T Sbjct 65 GVRTDQ--------PGTLLRDYHTV----SDYRGRPLPSAAVTAKGLQKLTSPAKYTHVT 112 Query 107 WREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFL 159 R YL DA F VA+ P V++ L A+ P + LGRRSCP T PL L Sbjct 113 ERFYLQDAVFVVAV-AAPEP--VLTTLVDAIRAPAFPLALGRRSCPPTQPLLL 162 >ref|YP_003698057.1| CRISPR-associated protein Cas5 family [Arcanobacterium haemolyticum DSM 20595] gb|ADH93438.1| CRISPR-associated protein Cas5 family [Arcanobacterium haemolyticum DSM 20595] Length=243 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 79/186 (42%), Gaps = 41/186 (22%) Query 1 MRSYLILRLAGPMQAWGQPTFEGT-RPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSE 59 M L +RL+GP+Q+W P G T R+PTRSGL+GLL + LG QR + Sbjct 1 MIESLYIRLSGPLQSWAGPAVSGNIVRTERYPTRSGLIGLLASALGAQRGEWPDWL---N 57 Query 60 SVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQ-------------- 105 V+F VR +DRR +T D+HT+ E + +Q Sbjct 58 DVEFMVR------EDRRPIITD--DFHTINPRTESVEFRSRYLIVQGNSASKACGKKALV 109 Query 106 -----------TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLT 154 R YL D F V + H + ELE A+ P + YLGR++ Sbjct 110 FTPDAQGGTSVVNRTYLADGEFVVRITADGH----LDELEDALSSPGFVTYLGRKAFAPE 165 Query 155 HPLFLG 160 P +LG Sbjct 166 FPFYLG 171 >ref|YP_002834437.1| CRISPR-associated protein [Corynebacterium aurimucosum ATCC 700975] ref|ZP_06042201.1| CRISPR-associated protein [Corynebacterium aurimucosum ATCC 700975] gb|ACP32499.1| CRISPR-associated protein [Corynebacterium aurimucosum ATCC 700975] Length=238 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 17/150 (11%) Query 11 GPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDEL 70 P+Q+WG + TR T + P++SG+LG+L A G +R D ++ L+ + FAVR D+ Sbjct 11 APLQSWGNESRYATRTTSQIPSKSGVLGMLAAAEGRRRTD--GIEDLAR-LTFAVRVDQ- 66 Query 71 ILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVI 130 S + LRDY T +D++ + R +L DA+F A+ ++ Sbjct 67 -------SGSLLRDYQTA----QDWQRNPNASAKLVTRYFLSDAAFVAAIEAEDRG--LL 113 Query 131 SELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 L +A+ KP + +LGRRSCP L G Sbjct 114 EGLAEALNKPAFPIFLGRRSCPAPPNLVQG 143 >ref|YP_745198.1| hypothetical protein GbCGDNIH1_1377 [Granulibacter bethesdensis CGDNIH1] gb|ABI62275.1| hypothetical protein GbCGDNIH1_1377 [Granulibacter bethesdensis CGDNIH1] Length=225 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 37/204 (18%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSESVQ 62 +L+ LA + + G+ R + +PTRS ++GL+GA LGI+RD D S+L LS Sbjct 6 FLVFGLAASLGSMGELAGHERRGSLIWPTRSAIIGLMGAALGIERDGDFSALDVLS---- 61 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLG--------------AREDYRGLKSHETIQTWR 108 D I D + LRDYHT+ A D RG + T T R Sbjct 62 ----IDVAIFD----AGAPLRDYHTIETIPSAAAKNPNSRPEALRDARGRTN--TAITHR 111 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQ 168 +Y + +A+ + + A+L+P +T Y+GR+SCPL P +A + Sbjct 112 DYRTSVFYGIAV-----RGAGLERIVAALLEPHFTLYVGRKSCPLAAPTGAKIVEAVSAE 166 Query 169 KALLNYEPVGGDIYSEESVTGHHL 192 AL E + ++ +ESV H L Sbjct 167 AAL---EHLKAPLWRKESVKAHLL 187 >ref|ZP_07981242.1| hypothetical protein SSA3_31592 [Streptomyces sp. SA3_actG] Length=287 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 75/161 (46%), Gaps = 25/161 (15%) Query 13 MQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELIL 72 +Q+WG+ + R T FP+RSGL G+L A LG R L E +V Sbjct 24 LQSWGEHSHFSDRDTLAFPSRSGLTGMLAAALGRPRH-----APLDEFAALSVTV----- 73 Query 73 DDRRVSVTG--LRDYHTVLGAREDYRGLKSHE---------TIQTWREYLCDASFTVALW 121 RV G LRD+HTV G + + + E T+ + R YL DA FTVAL Sbjct 74 ---RVDRAGNRLRDFHTVGGGLSGVQTVVTAEGGRRSGDTTTLTSTRWYLQDAVFTVALT 130 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTC 162 L + S A+ PR+ YLGRRSCP P+ LG Sbjct 131 LA-DGSAPPSTWATALRNPRWPLYLGRRSCPPAGPVLLGAS 170 >ref|YP_002466639.1| CRISPR-associated protein Cas5 family [Methanosphaerula palustris E1-9c] gb|ACL16916.1| CRISPR-associated protein Cas5 family [Methanosphaerula palustris E1-9c] Length=257 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 86/182 (47%), Gaps = 22/182 (12%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 YL L G M +WG RPT PTRS +LGLL A LGI+RD+ L AL+ + + Sbjct 6 YLTFSLYGMMASWGDIAVGEYRPTADHPTRSAVLGLLAAALGIRRDEEERLAALTRAYKV 65 Query 64 AVRCDELILDDRRVSVTGLRDYHTVL---GAREDYRGLKSHE----------TIQTWREY 110 A+R D LRDYHT A++ + L + TI + R+Y Sbjct 66 AIRVD--------APGMLLRDYHTTQVPSAAKKGRQYLTRKDELAAPREVLNTILSTRDY 117 Query 111 LCDASFTVALWLTPHA-TMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQK 169 CDA + V +W A + L + + P +T YLGR+SCPL P+ A D Sbjct 118 RCDAVYRVYIWCRDTAPPYSLKTLAEHLQHPVFTLYLGRKSCPLALPVNPEVKTAPDLLT 177 Query 170 AL 171 AL Sbjct 178 AL 179 >ref|ZP_06581742.1| crispr-associated protein cas5 family protein [Streptomyces ghanaensis ATCC 14672] gb|EFE72203.1| crispr-associated protein cas5 family protein [Streptomyces ghanaensis ATCC 14672] Length=233 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 13/145 (8%) Query 13 MQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELIL 72 MQ+WG + +R T PT+SG++GLL A LGI RD +Q L+E ++ VR Sbjct 1 MQSWGTRSQFASRDTATEPTKSGVVGLLAAALGIPRDADEEIQNLAE-LRMGVRV----- 54 Query 73 DDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISE 132 DR V D+HTV + G K+H T T R YL DA F V + T ++ + Sbjct 55 -DREGVVEA--DFHTVQNV-PNTEG-KNHRTAVTKRFYLADALFLVG--VESDDTQLLHQ 107 Query 133 LEKAVLKPRYTPYLGRRSCPLTHPL 157 L A+ PR+ Y GR++ P+ Sbjct 108 LHTALTAPRWPLYFGRKAFVPARPI 132 >ref|ZP_08216757.1| CRISPR-associated Cas5 family protein [Streptomyces clavuligerus ATCC 27064] Length=269 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 86/175 (49%), Gaps = 29/175 (16%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDD-TSSLQALSESVQF 63 L+LRLAGP+Q+WG + +R TG PT+SG++GLL A G R L+AL + Sbjct 2 LLLRLAGPLQSWGSASAFNSRQTGAEPTKSGVIGLLAAADGRARGACIEDLRAL----RL 57 Query 64 AVRCDELILDDRRVSVTGLRDYHTV------------LGAREDYRGLKSHETIQ-TWREY 110 VR D S T LRDYHT +GA+ R + Q T R Y Sbjct 58 GVRVDR--------SGTLLRDYHTASDHRGRPLAQAGVGAKGTQRPTSPAKYTQVTTRYY 109 Query 111 LCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 L DA F AL P A ++ L++AV P + LGRRSC + PL LG S Sbjct 110 LQDAVFLAAL-AGPRA--LLDRLDRAVRAPAFPLALGRRSCVPSLPLALGVHPGS 161 >ref|YP_003508779.1| Cas5 family CRISPR-associated protein [Meiothermus ruber DSM 1279] gb|ADD29759.1| CRISPR-associated protein Cas5 family [Meiothermus ruber DSM 1279] Length=231 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 20/186 (10%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRLAGPMQ+WG + R T P++SG++GLL A +GI R++ + + L+ ++ Sbjct 4 LLLRLAGPMQSWGTKSRFDERDTDLTPSKSGVIGLLCAAMGIDREERAPVLELAR-LRMG 62 Query 65 VRCDELILDDRRVSVTGLR-DYHT---VLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 VR D+ + LR DY T V+ A E K H T + R YL DA F V Sbjct 63 VRVDQPGV---------LRYDYQTAQNVIAADES----KVHPTTTSRRYYLADAVFLVG- 108 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD 180 L ++ +A+ P + +LGR+ + ++L +P + L Y +G D Sbjct 109 -LEGEDQRLLERAHRALKNPSWPLFLGRKGYLPSPGVYLEDGLREEPLQEALKYRYLGRD 167 Query 181 IYSEES 186 +E Sbjct 168 WPKDEE 173 >ref|ZP_07985495.1| hypothetical protein SSA3_15935 [Streptomyces sp. SA3_actF] Length=278 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 77/159 (48%), Gaps = 21/159 (13%) Query 13 MQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELIL 72 +Q+WG+ + R T FP+RSGL G+L A LG R + L + ++ VR D Sbjct 15 LQSWGEHSHFSDRDTLAFPSRSGLTGMLAAALGRPRH--APLDEFA-ALSVTVRVDR--- 68 Query 73 DDRRVSVTGLRDYHTVLGAREDYRGLKSHE---------TIQTWREYLCDASFTVALWLT 123 + LRD+HTV G + + + E T+ + R YL DA FTVAL L Sbjct 69 -----AGNRLRDFHTVGGGLSGVQTVVTAEGGRRSGDTTTLTSTRWYLQDAVFTVALTLA 123 Query 124 PHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTC 162 + S A+ PR+ YLGRRSCP P+ LG Sbjct 124 -DGSAPPSTWATALRNPRWPLYLGRRSCPPAGPVLLGAS 161 >ref|ZP_06772211.1| CRISPR-associated protein Cas5 [Streptomyces clavuligerus ATCC 27064] gb|EFG07810.1| CRISPR-associated protein Cas5 [Streptomyces clavuligerus ATCC 27064] Length=300 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 86/175 (49%), Gaps = 29/175 (16%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDD-TSSLQALSESVQF 63 L+LRLAGP+Q+WG + +R TG PT+SG++GLL A G R L+AL + Sbjct 33 LLLRLAGPLQSWGSASAFNSRQTGAEPTKSGVIGLLAAADGRARGACIEDLRAL----RL 88 Query 64 AVRCDELILDDRRVSVTGLRDYHTV------------LGAREDYRGLKSHETIQ-TWREY 110 VR D S T LRDYHT +GA+ R + Q T R Y Sbjct 89 GVRVDR--------SGTLLRDYHTASDHRGRPLAQAGVGAKGTQRPTSPAKYTQVTTRYY 140 Query 111 LCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 L DA F AL P A ++ L++AV P + LGRRSC + PL LG S Sbjct 141 LQDAVFLAAL-AGPRA--LLDRLDRAVRAPAFPLALGRRSCVPSLPLALGVHPGS 192 >ref|YP_003718071.1| CRISPR-associated protein [Mobiluncus curtisii ATCC 43063] gb|ADI66577.1| CRISPR-associated protein [Mobiluncus curtisii ATCC 43063] Length=234 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 17/155 (10%) Query 11 GPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDEL 70 GP+Q+WG + TR TG P++SG++GLL A G R D L+ L + +AVR D+ Sbjct 11 GPLQSWGDESRYTTRATGSTPSKSGVIGLLAAAQGRHRTDP--LEDLVR-LDYAVRVDQ- 66 Query 71 ILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVI 130 S LRDY T ++D + R +L DA+F A+ + ++ Sbjct 67 -------SGALLRDYQTSQPWQKD----PNASAKLVSRYFLSDAAFVAAIGAENRS--IL 113 Query 131 SELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 L+ + +P Y +LGRRSCP L LG + + Sbjct 114 EGLQGNLYQPAYPLFLGRRSCPAPANLDLGIVEGN 148 >ref|YP_902004.1| CRISPR-associated Cas5 family protein [Pelobacter propionicus DSM 2379] gb|ABK99946.1| CRISPR-associated protein, Cas5e family [Pelobacter propionicus DSM 2379] Length=232 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 6/146 (4%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRL GPMQ+WG + R TG+ P++SG++GLL A LGI R++ L+ L+ + Sbjct 4 LLLRLVGPMQSWGTTSRFDQRDTGKEPSKSGVVGLLAAALGIDRENWVDLEPLT-CLAMG 62 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D + R G T++ A D K + R YL DA+F V L Sbjct 63 VRHDRPGVPKRDYQTAGCASTDTIIKA--DGTQAKGGGVVSQ-RFYLADAAFLVGLECDD 119 Query 125 HATMVISELEKAVLKPRYTPYLGRRS 150 + ++ + A+ P +T LGR+S Sbjct 120 NC--LLERIHVALHNPFWTLALGRKS 143 >ref|ZP_05006970.1| crispr-associated protein [Streptomyces clavuligerus ATCC 27064] gb|EDY51269.1| crispr-associated protein [Streptomyces clavuligerus ATCC 27064] Length=260 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 86/175 (49%), Gaps = 29/175 (16%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDD-TSSLQALSESVQF 63 L+LRLAGP+Q+WG + +R TG PT+SG++GLL A G R L+AL + Sbjct 86 LLLRLAGPLQSWGSASAFNSRQTGAEPTKSGVIGLLAAADGRARGACIEDLRAL----RL 141 Query 64 AVRCDELILDDRRVSVTGLRDYHTV------------LGAREDYRGLKSHETIQ-TWREY 110 VR D S T LRDYHT +GA+ R + Q T R Y Sbjct 142 GVRVDR--------SGTLLRDYHTASDHRGRPLAQAGVGAKGTQRPTSPAKYTQVTTRYY 193 Query 111 LCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 L DA F AL P A ++ L++AV P + LGRRSC + PL LG S Sbjct 194 LQDAVFLAAL-AGPRA--LLDRLDRAVRAPAFPLALGRRSCVPSLPLALGVHPGS 245 >ref|YP_004304570.1| CRISPR-associated protein Cas5 family [polymorphum gilvum SL003B-26A1] gb|ADZ71266.1| CRISPR-associated protein Cas5 family [Polymorphum gilvum SL003B-26A1] Length=245 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 6/177 (3%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M +L+LRL P+ A+G + P P+ S L GLLG LG +R++ + LQ L + Sbjct 1 MPHFLLLRLEAPLVAFGDIMVDAKGPVSDLPSASMLTGLLGNALGYRREERTRLQRLQDR 60 Query 61 VQFAVRCDE--LILDDRRVSVTGLRDYHTVLGAREDYR--GLKSHETIQ-TWREYLCDAS 115 + A R D + + + G D R + R G S+E +RE+ CD S Sbjct 61 IVHAARLDRSGRRFTEFQTARLGKDDQGWTTRGRPEGRAGGDGSYEGPHLRYREHDCDVS 120 Query 116 FTVALWLTPHATMV-ISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKAL 171 VAL L PH + +L A+ +P ++GR+ C + +F G +A D AL Sbjct 121 ALVALCLRPHDEAPDLEDLAVALQQPARPLFIGRKPCLPSSQIFAGITEAPDHLAAL 177 >ref|ZP_07372888.1| CRISPR-associated protein cas5 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gb|EFL93065.1| CRISPR-associated protein cas5 [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length=234 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 17/155 (10%) Query 11 GPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDEL 70 GP+Q+WG + TR TG P++SG++GLL A G R D L+ L + +AVR D+ Sbjct 11 GPLQSWGDESRYTTRATGSTPSKSGVIGLLAAAQGRHRTDP--LEDLVR-LDYAVRVDQ- 66 Query 71 ILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVI 130 S LRDY T ++D R +L DA+F A+ + ++ Sbjct 67 -------SGALLRDYQTSQPWQKD----PDASAKLVSRYFLSDAAFVAAIGAENRS--IL 113 Query 131 SELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 L+ + +P Y +LGRRSCP L LG + + Sbjct 114 EGLQGNLYQPAYPLFLGRRSCPAPANLDLGIVEGN 148 >gb|EES53470.1| CRISPR-associated protein, Cas5 [Leptospirillum ferrodiazotrophum] Length=243 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 21/181 (11%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGI---QRDDTSSLQALSES 60 YL+L L P+Q+WG + G R T +FPTRSG++GL+ + LG QR+ + +L ++ Sbjct 5 YLLLWLEAPLQSWGFDSKFGRRETLKFPTRSGVVGLVCSALGAGGEQRELLAEFSSLRQT 64 Query 61 VQFAVRCDELILDDRRVSVTG-LRDYHTVLGARED---YRGLKSHETIQ----------- 105 V VR + +++ LRD+ V +D + L +TI Sbjct 65 VISFVRSRQTENGKQKLDREPLLRDFQMVGSGYDDRDPWMSLMIPKTISGGRSVGGGTKM 124 Query 106 TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 T+R YL D F V P ++ I+E A+ P + YLGR++C T ++ GT + Sbjct 125 TYRFYLQDTFFAVIFESLPQQSLEIAE---ALRNPVWDLYLGRKNCVPTDFIYRGTFETQ 181 Query 166 D 166 + Sbjct 182 E 182 >ref|YP_001602451.1| hypothetical protein GDI_2206 [Gluconacetobacter diazotrophicus PAl 5] ref|YP_002274835.1| Cas5 family CRISPR-associated protein [Gluconacetobacter diazotrophicus PAl 5] emb|CAP56149.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] gb|ACI50220.1| CRISPR-associated protein Cas5 family [Gluconacetobacter diazotrophicus PAl 5] Length=260 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 74/170 (43%), Gaps = 21/170 (12%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M +L + PM ++G R P RS +LGL+ ACLG+ RDD + AL+ Sbjct 1 MGQFLTFAMVAPMASFGAIAVGERRDGWDRPARSAVLGLMAACLGLTRDDEDAQAALAAD 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLG--AREDYRGLKSHE----------TIQTWR 108 A+ C L DYHT AR ++R E TI + R Sbjct 61 YGLAILC--------HAPGKLLTDYHTAQAAPARRNWRPATRAEELAASPGDLATILSRR 112 Query 109 EYLCDASFTVALWLTPH-ATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 +Y A+W + A + L+ A+ +P +TP LGRRSCP PL Sbjct 113 DYRMGTWHLGAVWTSGKTARWSLEALQAAMREPVFTPSLGRRSCPAGLPL 162 >ref|ZP_05077982.1| CRISPR-associated protein Cas5, Ecoli subtype [Rhodobacterales bacterium Y4I] gb|EDZ45961.1| CRISPR-associated protein Cas5, Ecoli subtype [Rhodobacterales bacterium Y4I] Length=232 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 82/185 (44%), Gaps = 32/185 (17%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSE 59 M YLI +L + A G+ R + P RS ++G LGA +G++RD D S L AL Sbjct 1 MPEYLIFQLVAAIGAMGEFGGHDRRGSLTLPGRSAVIGTLGAAMGLRRDADFSGLDALGV 60 Query 60 SVQFAVRCDELILDDRRVSVTGLRDYHTVLGA------REDYR-------GLKSHETIQT 106 +V + RDYHTV R R G K + T+ T Sbjct 61 AVASFGKTAP------------FRDYHTVQTVPSAAVKRPQSRPQALRDAGRKVNTTL-T 107 Query 107 WREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASD 166 R+Y D F VA+W ++EL A+ P + +LGR+SCPL+ P A+ Sbjct 108 SRDYRADCVFGVAIW-----GEGLAELASALSAPVFQTFLGRKSCPLSAPFDPQIVAAAT 162 Query 167 PQKAL 171 P AL Sbjct 163 PSAAL 167 >ref|ZP_07976074.1| CRISPR-associated Cas5e family protein [Streptomyces sp. SA3_actG] ref|ZP_07983205.1| CRISPR-associated Cas5e family protein [Streptomyces sp. SA3_actF] Length=217 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/137 (39%), Positives = 72/137 (52%), Gaps = 24/137 (17%) Query 25 RPTGRFPTRSGLLGLLGACLGIQRD-DTSSLQALSESVQFAVRCDELILDDRRVSVTGLR 83 R T R PT+SG++GLL A G +RD D S L AL +FAVR D+ T +R Sbjct 3 RSTERAPTKSGVIGLLAAAQGRERDADLSDLAAL----RFAVRLDQ--------PGTRVR 50 Query 84 DYHTVLGAREDYRGLKSHETIQ-TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRY 142 D+ T R L + ++ + R YL DA F A+ A +I EL AV P + Sbjct 51 DFQTA-------RHLDTDASMPVSERFYLSDAVFVAAVE---GAADLIDELLAAVRAPVF 100 Query 143 TPYLGRRSCPLTHPLFL 159 P+LGRRSCP + P+ L Sbjct 101 LPFLGRRSCPPSRPVDL 117 >ref|YP_741794.1| CRISPR-associated Cas5 family protein [Alkalilimnicola ehrlichii MLHE-1] gb|ABI56304.1| CRISPR-associated protein, Cas5e family [Alkalilimnicola ehrlichii MLHE-1] Length=242 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 81/187 (43%), Gaps = 25/187 (13%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 LILRL P+ ++G + PT RFP RS L G+L LG DT +L +L + +A Sbjct 4 LILRLDAPLMSFGGVLVDQHNPTDRFPGRSMLTGMLANALGWHHQDTEALNSLQARISYA 63 Query 65 VRCDELILDDRRVSVTGLRDYHTV--------------LGAREDYRGLKSHETI-QTWRE 109 R D V LRDY TV GA E G + I Q R Sbjct 64 ARWD--------VPPEPLRDYQTVDLGQTHLANPGWTTRGAPEHREGGTAKRGIHQRDRH 115 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQK 169 Y + TVA+ + P V + L A+ P ++GR++C P+ L + SD Sbjct 116 YWANGVMTVAVTVPPGEPNVAT-LAAALRHPARPLFIGRKACLPAAPVLL-RVRESDDAY 173 Query 170 ALLNYEP 176 +L EP Sbjct 174 HVLASEP 180 >gb|ECT12416.1| hypothetical protein GOS_7088405 [marine metagenome] Length=184 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 7/171 (4%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 ++ LRL GP+Q+WG + R TG PT+S + G+ A LG R L E + Sbjct 13 WISLRLMGPLQSWGFDSQYNRRNTGLMPTKSAIAGICCAALGYPRGSLEEGNFLKEFSKL 72 Query 64 AVRCDELILDDRRVSVTG--LRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALW 121 + + + + V + L+D+HTV + K+ + T R+YL DA+F V Sbjct 73 KMTAIAIPYEKKGVFLETRRLQDWHTV--QKTIRANGKTKDCHITHRQYLTDAAFGV--- 127 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALL 172 L A + ++ A+ P++ +LGR++C + P+ +G + LL Sbjct 128 LLEGAGAFLERIKPALQDPKWGVWLGRKTCIPSAPVLVGIFKTQKRHFVLL 178 >ref|YP_003705960.1| Cas5 family CRISPR-associated protein [Truepera radiovictrix DSM 17093] gb|ADI15417.1| CRISPR-associated protein Cas5 family [Truepera radiovictrix DSM 17093] Length=230 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 20/178 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRLAGPMQ+WG + R + P++SG++GLL A +GI R+ + L+ +++ Sbjct 4 LLLRLAGPMQSWGTKSRFDERDSDLIPSKSGVIGLLCAAMGIYREALEPVLELA-ALRMG 62 Query 65 VRCDELILDDRRVSVTGLR-DYHT---VLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 VR D+ + LR DY T V+ A E K H T + R YL DA+F V Sbjct 63 VRVDQPGV---------LRYDYQTAQNVIAADES----KVHPTTISRRYYLSDAAFLVG- 108 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVG 178 L +++ +A+ P + YLGR+ + ++L +P + L Y +G Sbjct 109 -LEGDDQPLLARAHRALRHPTWPLYLGRKGYLPSPGVYLKDGLRDEPLRDALGYPFIG 165 >ref|ZP_03993262.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gb|EEJ54446.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] Length=245 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 26/176 (14%) Query 7 LRLAGPMQAWGQPTFEGT-RPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAV 65 +RLAGP+Q+W G T +PTR L GL+ ACLG R + +QFAV Sbjct 6 IRLAGPLQSWAGAKVSGNISHTQDYPTRGSLEGLVAACLGCPR---GKYPLWFQDLQFAV 62 Query 66 RCDE--LILDDRRVSVTGLRDYHT---------VLGAREDYRGLK-----SHETIQTWRE 109 R D I DD + G+RD + G R RGL +T R Sbjct 63 RVDSPGRICDDYQT--IGVRDEDMQVATRLLTLLTGKRATNRGLAFIPDAQGKTTIVRRT 120 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS 165 L DA F V + H + +L++A+ P + YLGR++ P +LG + S Sbjct 121 LLADAEFIVQIQCEGH----LEQLDQAISDPTFVSYLGRKAFAPGFPFYLGIGEDS 172 >ref|YP_594141.1| CRISPR-associated Cas5e family protein [Deinococcus geothermalis DSM 11300] gb|ABF44067.1| CRISPR-associated protein, Cas5e family [Deinococcus geothermalis DSM 11300] Length=232 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 79/158 (50%), Gaps = 18/158 (11%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 + L+LRL PMQAWG + R T P++SG+LGL A LGI R D S++ L+ + Sbjct 2 ATLLLRLVAPMQAWGTRSRFDDRDTEAEPSKSGVLGLCAAALGIDRAD--SVEHLAR-LA 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWL 122 F VR D R V G DYHT + G T T R YL DA+F L Sbjct 59 FGVRVD-------REGVAGT-DYHTA----QLRPGNPRTRTDVTRRAYLADAAFWAGL-- 104 Query 123 TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 ++++L+ A+ P + LGR++ P + P+ G Sbjct 105 -EGDAGLLTDLDAALHNPHWPLSLGRKAFPPSLPICAG 141 >ref|YP_502836.1| CRISPR-associated Cas5e family protein [Methanospirillum hungatei JF-1] gb|ABD41117.1| CRISPR-associated protein, Cas5e family [Methanospirillum hungatei JF-1] Length=225 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 9/148 (6%) Query 35 GLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDE--LILDD----RRVSVTGLRDYHTV 88 +LG++ A LGI+RDD + L F+V + +++ D + V + L+ + V Sbjct 15 AVLGMVAAALGIRRDDEEAQNRLQAGYGFSVMVLQPGIMIQDFHTIQSVHSSSLKKMNHV 74 Query 89 LGAREDYRGLKSHETIQTWREYLCDASFTVALWL--TPHATMVISELEKAVLKPRYTPYL 146 + R D L ETI + REYLCD +W+ A + E+ + P + YL Sbjct 75 M-TRRDEMNLGDSETILSRREYLCDHVSVACVWIRDAESAQFSLEEIAASFRNPVFCLYL 133 Query 147 GRRSCPLTHPLFLGTCQASDPQKALLNY 174 GR+SCP P+ QA + AL+ + Sbjct 134 GRKSCPPALPVHARVIQADSLKSALVQH 161 >ref|YP_003684639.1| CRISPR-associated protein Cas5 family [Meiothermus silvanus DSM 9946] gb|ADH63131.1| CRISPR-associated protein Cas5 family [Meiothermus silvanus DSM 9946] Length=232 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 21/186 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRLAGPMQ+WG + R T P++SG++GLL A +GI R+ + L++ ++ Sbjct 4 LLLRLAGPMQSWGTKSRFDERDTDLSPSKSGVIGLLCAAMGIDREKREPVLQLAD-LRMG 62 Query 65 VRCDELILDDRRVSVTGLR-DYHT---VLGAREDYRGLKSHETIQTWREYLCDASFTVAL 120 VR D+ + LR DY T V+ A K H T + R YL DA F V Sbjct 63 VRLDQPGV---------LRYDYQTAQNVIAADAS----KVHPTTVSRRYYLADAVFLVG- 108 Query 121 WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDP-QKALLNYEPVGG 179 L ++ +A+ P + +LGR+ + ++L +P Q+AL NY +G Sbjct 109 -LEGEDRRLLECAHQALKNPVWPLFLGRKGYVPSPGVYLKDGLRDEPLQEALKNYRFLGR 167 Query 180 DIYSEE 185 D +E Sbjct 168 DWPEDE 173 >ref|YP_145430.1| hypothetical protein TTHB191 [Thermus thermophilus HB8] dbj|BAD71987.1| conserved hypothetical protein [Thermus thermophilus HB8] Length=248 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 30/174 (17%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLG-IQRDDTSSLQALS----- 58 L++RL GP+Q+WG + R T +PT+SG++GLL A LG +R+D S L AL Sbjct 4 LLIRLQGPLQSWGTRSRFDHRDTWPYPTKSGVVGLLAAALGRDRREDVSDLAALRMGVRV 63 Query 59 ----------ESVQFAVRCDELILDDRRVSVTGLRDY---HTVLGAREDYRGLKSHETIQ 105 ++ QF R + + VS R++ +T R D R + T+ Sbjct 64 DRKGVLKVDYQTAQFVYRTEGYVA----VSTPKEREWLSRYTKTPIRVDER----NATVT 115 Query 106 TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFL 159 + R +L DA+F V L ++ L +A+ PR+ YLGR+S + P +L Sbjct 116 SKRYFLSDAAFLVGL---EGERALLEALHRALKNPRFPLYLGRKSYVPSPPPYL 166 >ref|YP_004264317.1| CRISPR-associated protein Cas5 family [Deinococcus proteolyticus MRP] gb|ADY27682.1| CRISPR-associated protein Cas5 family [Deinococcus proteolyticus MRP] Length=234 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 77/161 (47%), Gaps = 17/161 (10%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 + L+LRL PMQAWG + R T PT+SG+LGL A LGI R D + L+ ++ Sbjct 2 AILLLRLVAPMQAWGSRSRFDDRDTEAEPTKSGVLGLCAAALGIDRAD--PIDDLTR-LR 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWL 122 F VR D R G RDYHT + G +T T R YL DA+F L Sbjct 59 FGVRVD-------REGGAG-RDYHTA----QLKPGDPKTKTDVTTRFYLSDAAFWAGLEG 106 Query 123 TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ 163 A + L A+ P + LGR++ + P+F G Q Sbjct 107 EDRA--FLQRLYAALHNPHWPLSLGRKAFQASLPIFAGPPQ 145 >ref|YP_004452046.1| Cas5 family CRISPR-associated protein [Cellulomonas fimi ATCC 484] gb|AEE44659.1| CRISPR-associated protein Cas5 family [Cellulomonas fimi ATCC 484] Length=241 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/157 (35%), Positives = 77/157 (49%), Gaps = 24/157 (15%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 + L+L LAGP+QAWG + TR T PT+SG++GLL A G +R D SL+ ++ Sbjct 2 TVLVLTLAGPLQAWGSESRFTTRATDDAPTKSGIVGLLAAAQGRRRSD--SLEDYV-GLR 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQ-TWREYLCDASFTVALW 121 VR D+ LRD+ T R L + + ++R Y DA F + Sbjct 59 LGVRIDQ--------PGRLLRDFQTA-------RSLDGRQPMPLSYRYYREDARFLAVV- 102 Query 122 LTPHATMVISELEKAVLK-PRYTPYLGRRSCPLTHPL 157 HA + EL L+ P + YLGRRSCP PL Sbjct 103 ---HAEDSLLELFVDALRHPVFPLYLGRRSCPPAEPL 136 >ref|ZP_05745537.1| CRISPR-associated protein [Lactobacillus antri DSM 16041] gb|EEW53945.1| CRISPR-associated protein [Lactobacillus antri DSM 16041] Length=236 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 19/181 (10%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L ++LAGP+Q++G R + P++S ++GL+ A LG +R+D S ++ L+E ++ A Sbjct 4 LTIKLAGPLQSYGNEATFSRRTSYHCPSKSAVIGLIAAALGYRRND-SRIKQLNE-LKMA 61 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D+ L D+ T+ +Y ++ ++R+YL DA F VA+ Sbjct 62 VRIDQ--------PGRTLTDFQTI-----EYNQKNGKRSL-SYRDYLQDAVFVVAI---A 104 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSE 184 I +E A+ P++ +LGRR+ L +P L YE + Y Sbjct 105 GEDQQIELVETALHHPKFQLFLGRRANVPAGLLLTRVFDEENPVTVLRQYEWQAAEWYQR 164 Query 185 E 185 + Sbjct 165 Q 165 >ref|ZP_04932938.1| hypothetical protein PA2G_00233 [Pseudomonas aeruginosa 2192] gb|EAZ57057.1| hypothetical protein PA2G_00233 [Pseudomonas aeruginosa 2192] Length=220 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 13/157 (8%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 + L++RL GPMQ+WG + R T P++SG+LGL+ A LG RD + L+ L+ S++ Sbjct 2 ATLLMRLQGPMQSWGTTSRFDERDTQLEPSKSGVLGLVCAALG--RDRSEPLEDLA-SLR 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWL 122 VR D LRDY T G T+ + R YL DA F V L Sbjct 59 MGVRVDR--------EGIPLRDYQTATGVLVASGKADPRRTVVSPRHYLADAVFLVGLEG 110 Query 123 TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFL 159 A ++ +++A+ P + LGR+S P++L Sbjct 111 RDQA--LLERIQQALRAPFWPLCLGRKSFVPGSPVWL 145 >ref|YP_003003265.1| Cas5 family CRISPR-associated protein [Dickeya zeae Ech1591] gb|ACT05786.1| CRISPR-associated protein Cas5 family [Dickeya zeae Ech1591] Length=238 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 18/172 (10%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDT---SSLQALSES 60 Y++L L GP+QAWG + G R T FPTRSG+LGLL G + + + +S Sbjct 7 YMLLWLEGPLQAWGHDSKFGVRDTLNFPTRSGILGLLCCARGAGGPEIEWLAQMNNMSME 66 Query 61 VQFAVRCD--------ELILDDRRVSVTGLRD---YHTVLGAR-EDYRGLKSHETIQTWR 108 V+ R D E L D ++ +G D + ++L + D + T T+R Sbjct 67 VRAYARADDKGQPYLREPTLCDFQMVGSGYDDSDPWQSLLIPKTSDGKKAVGGGTKMTYR 126 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 YL DA F V L + ++S+ A+ P + YLGR++C T ++ G Sbjct 127 YYLQDAVFAVVLEVPQTQAELLSD---ALQNPVWDLYLGRKNCVPTELIYQG 175 >ref|ZP_03971211.1| CRISPR-associated protein [Corynebacterium glucuronolyticum ATCC 51866] gb|EEI64036.1| CRISPR-associated protein [Corynebacterium glucuronolyticum ATCC 51866] Length=242 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 39/184 (21%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTR-PTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSE 59 M S +RL+GP+Q+W + G T PT +GL GLL LG +RD+ + Sbjct 1 MPSSTFIRLSGPIQSWAGQSVSGNFIRTNPIPTLTGLRGLLAGALGARRDE---IPEWIS 57 Query 60 SVQFAVRCDELILDDRRVSVTGLRDYHTVLGARE---DYR-------GLKSHETIQ---- 105 V+F+VR D+ + + + D+ T+ G+RE D+R G+K+ Q Sbjct 58 KVRFSVREDQ--------TGSFVDDFQTI-GSREEEWDFRRRIAILQGMKARSIKQLSFK 108 Query 106 --------TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 R YL +A F V + H E++ A P + YLGR++ P P Sbjct 109 PAVGANAVVRRTYLSEAEFIVRVTDERHT----EEIDHAFSSPVFATYLGRKAFPAAFPF 164 Query 158 FLGT 161 +LGT Sbjct 165 YLGT 168 >ref|YP_805654.1| CRISPR-associated protein [Lactobacillus casei ATCC 334] gb|ABJ69212.1| CRISPR-associated protein, Cas5e family [Lactobacillus casei ATCC 334] Length=236 Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 20/161 (12%) Query 7 LRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVR 66 +RL P+Q++G R TG +P++S ++G+L A LG QRDD ++ AL++ + FAVR Sbjct 6 IRLTSPLQSYGNEAQFARRTTGDYPSKSAIIGMLAAALGYQRDD-PAINALNDLL-FAVR 63 Query 67 CDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHA 126 D+ + ++ T K T+R+ L DA F VA+ A Sbjct 64 VDQ--------PGQVMTEFQTA--------EWKPGTRKLTYRDLLQDAVFVVAIGSEDEA 107 Query 127 TMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDP 167 + L +A+ PR+ YLGRR+ L + T DP Sbjct 108 WL--DRLAEALRHPRFQLYLGRRANVPAGVLKIQTFAGQDP 146 >ref|YP_812841.1| CRISPR-associated protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gb|ABJ58403.1| CRISPR-associated protein, Cas5e family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length=233 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 20/169 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L ++L P+QA+G R + P++S ++G++ A LG++R+D +++L++ + +A Sbjct 4 LTIKLTAPLQAYGNEASFERRTSWPAPSKSAVVGMIAAALGMRRED-ERIKSLND-LAYA 61 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D++ ++T + G R+ T+R++ DA + A + Sbjct 62 VRVDQI-----GKTMTEFQTVEWKPGTRK-----------LTYRDHYQDAVYVAA--VGS 103 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLN 173 +I ++E A+ PR+ YLGRR+CP L + + +DP K L N Sbjct 104 EDEELIGKIEYALKHPRFQLYLGRRACPPAGVLRIESFADTDPVKVLEN 152 >ref|YP_618906.1| hypothetical protein Ldb0872 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] emb|CAI97693.1| Hypothetical protein Ldb0872 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length=233 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 20/169 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L ++L P+QA+G R + P++S ++G++ A LG++R+D +++L++ + +A Sbjct 4 LTIKLTAPLQAYGNEASFERRTSWPAPSKSAVVGMIAAALGMRRED-ERIKSLND-LAYA 61 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D++ + ++ TV K T+R++ DA + A + Sbjct 62 VRVDQI--------GKTMTEFQTV--------EWKPGTRKLTYRDHYQDAVYVAA--VGS 103 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLN 173 +I ++E A+ PR+ YLGRR+CP L + + +DP K L N Sbjct 104 EDEELIGKIEYALKHPRFQLYLGRRACPPAGVLRIESFADTDPVKVLEN 152 >ref|YP_004628676.1| hypothetical protein CULC22_00036 [Corynebacterium ulcerans BR-AD22] gb|AEG82757.1| hypothetical protein CULC22_00036 [Corynebacterium ulcerans BR-AD22] Length=230 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 76/180 (42%), Gaps = 29/180 (16%) Query 5 LILRLAGPMQAWGQPTFEGT-RPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 + LRLAGP+Q+W P G T PT S L+GL+ G +RD+ + F Sbjct 6 VYLRLAGPLQSWAGPAVTGNFVRTEPIPTHSALVGLIAGACGYRRDEWPDWL---NPLNF 62 Query 64 AVRCD-----------------ELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQT 106 VR D E++ +R + TG R D RG+ S IQ Sbjct 63 RVRVDHPGKFVDDFQTVSAHEEEMLFRERLIYATGKRPSAKTTRLTPDGRGMTS--IIQ- 119 Query 107 WREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASD 166 R YL +A F V + H + L A+ P+++ YLGR++ P +LG D Sbjct 120 -RTYLAEAEFIVEVASDTHGEL----LRDALRAPKFSTYLGRKAFAPAFPFYLGATTDVD 174 >gb|AEG80579.1| hypothetical protein CULC809_00038 [Corynebacterium ulcerans 809] Length=230 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 76/180 (42%), Gaps = 29/180 (16%) Query 5 LILRLAGPMQAWGQPTFEGT-RPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 + LRLAGP+Q+W P G T PT S L+GL+ G +RD+ + F Sbjct 6 VYLRLAGPLQSWAGPAVTGNFVRTEPIPTHSALVGLIAGACGYRRDEWPDWL---NRLNF 62 Query 64 AVRCD-----------------ELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQT 106 VR D E++ +R + TG R D RG+ S IQ Sbjct 63 RVRVDHPGKFVDDFQTVSAHEEEMLFRERLIYATGKRPSAKTTRLTPDGRGMTS--IIQ- 119 Query 107 WREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASD 166 R YL +A F V + H + L A+ P+++ YLGR++ P +LG D Sbjct 120 -RTYLAEAEFIVEVASDTHGEL----LRDALRAPKFSTYLGRKAFAPAFPFYLGATTDVD 174 >ref|YP_217859.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gb|AAX66778.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gb|EFZ07497.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SCSA50] Length=248 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+RD+ L A + Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 QF +R + RDYHTV +E R E +Q + R+ Sbjct 61 YQFLLRAS--------GNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + +A+ TP A +++L+ ++ P + YLGR+S Sbjct 113 YYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKS 153 >ref|YP_004033823.1| crispr-associated protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gb|ADQ60846.1| CRISPR-associated protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length=233 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 20/169 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L ++L P+QA+G R + P++S ++G++ A LG++R+D +++L++ + +A Sbjct 4 LTIKLTAPLQAYGNEASFERRTSWPAPSKSAVVGMIAAALGMRRED-ERIKSLND-LAYA 61 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D++ ++T + G R+ T+R++ DA + A + Sbjct 62 VRVDQI-----GKTMTEFQTVEWKPGTRK-----------LTYRDHYQDAVYVAA--VGS 103 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLN 173 +I ++E A+ PR+ YLGRR+CP L + + +DP L N Sbjct 104 EDEELIGKIEYALKHPRFQLYLGRRACPPAGVLRIESFANTDPVNVLKN 152 >ref|ZP_07303560.1| CRISPR-associated protein cas5 [Streptomyces viridochromogenes DSM 40736] gb|EFL31929.1| CRISPR-associated protein cas5 [Streptomyces viridochromogenes DSM 40736] Length=278 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 88/199 (44%), Gaps = 52/199 (26%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M S L+LRLAGP+Q+WG R T PT+SG+ GL+ A LG+ R D L AL++ Sbjct 1 MTSVLLLRLAGPLQSWGALARFDRRDTLNRPTKSGVTGLVAAALGLDRAD--DLGALTD- 57 Query 61 VQFAVRCD----------------------ELILDDRRV--------SVTG-------LR 83 ++FAVR D +LI D RR + TG R Sbjct 58 LRFAVRADRPGTAVRDFHIVGSGTYPLRPRDLITDHRRAEKAAAALETSTGPVFGHLAAR 117 Query 84 DYHTVLGAREDY----------RGLKSHETIQTWREYLCDASFTVALWLTPHATMVISEL 133 GA ++ G + + + T R YL DA+F A+ P + + + Sbjct 118 SVTKWYGAPKEIAPDPKTGVLLAGNTTRDAMMTTRWYLADAAFVAAV-EHPDQNL-LHRI 175 Query 134 EKAVLKPRYTPYLGRRSCP 152 AV P+ +LGR+SCP Sbjct 176 SHAVEHPKRLLWLGRKSCP 194 >ref|YP_002491202.1| CRISPR-associated protein Cas5 family [Anaeromyxobacter dehalogenans 2CP-1] gb|ACL64136.1| CRISPR-associated protein Cas5 family [Anaeromyxobacter dehalogenans 2CP-1] Length=246 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 6/183 (3%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M LILR P+ A+G + FP S + GLLG LG + L+AL Sbjct 1 MIETLILRFDAPLLAFGGVAVDNQGVVQDFPGLSMVAGLLGNALGFDHREFDRLEALQRR 60 Query 61 VQFAVRCD---ELILDDRRVSV--TGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDAS 115 ++ A R D + ++D + V++ L T G E G S T +R Y DA Sbjct 61 LRVAARRDRKGQRLVDFQTVALGQAFLEQGWTTRGVIEGRDGAFSDATHIRYRAYWADAV 120 Query 116 FTVALWLTPHA-TMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNY 174 +T+A+ L P A T + +E+A+ +P +LGR++C + P+ G + AL + Sbjct 121 YTLAMTLEPAAETPDLDAVERALREPERPLFLGRKACLPSVPILAGRRRCPALLAALAGF 180 Query 175 EPV 177 E + Sbjct 181 ERI 183 >ref|YP_001189237.1| CRISPR-associated Cas5e family protein [Pseudomonas mendocina ymp] gb|ABP86505.1| CRISPR-associated protein, Cas5e family [Pseudomonas mendocina ymp] Length=220 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 14/176 (7%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L+LRL GPMQ+WG + R T P++SG+LGL+ A LG RD ++ L+ +++ Sbjct 4 LLLRLQGPMQSWGTTSRFDERDTQLEPSKSGVLGLVCAALG--RDRHEPVEDLA-ALRMG 60 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D +RDY T G T+ + R YL DA+F V L T Sbjct 61 VRVDH--------EGAPMRDYQTATGVLIATGKSDLRRTVVSPRYYLADAAFLVGLEGTD 112 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQAS-DPQKALLNYEPVGG 179 A +++ + A+ P + LGR+S P++L +S ++AL Y + G Sbjct 113 DA--LLARIHAALRAPHWPLALGRKSFAPGMPVWLPDGLSSLSLEEALAQYPRLSG 166 >ref|ZP_07091777.1| CRISPR system CASCADE complex protein CasD [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gb|EFK32759.1| CRISPR system CASCADE complex protein CasD [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length=233 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 20/169 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 L ++L P+QA+G R + P++S ++G++ A LG++R+D +++L++ + +A Sbjct 4 LTIKLTAPLQAYGNEASFERRTSWPAPSKSAVVGMIAAALGMRRED-ERIKSLND-LAYA 61 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D++ ++T + G R+ T+R++ DA + A + Sbjct 62 VRVDQI-----GKTMTEFQTVEWKPGTRK-----------LTYRDHYQDAVYVAA--VGS 103 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLN 173 +I ++E A+ PR+ YLGRR+CP L + + +DP L N Sbjct 104 EDEELIGKIEYALKHPRFQLYLGRRACPPAGVLRIESFADTDPVNVLKN 152 >ref|YP_002798909.1| CRISPR-associated protein, CT1976 [Azotobacter vinelandii DJ] gb|ACO77934.1| CRISPR-associated protein, CT1976 [Azotobacter vinelandii DJ] Length=217 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 14/176 (7%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 + L+L L GPMQ+WG + R T P++SG+LGL+ A LG RD L+ L+ +++ Sbjct 2 ATLLLCLQGPMQSWGTTSRFDERDTQLEPSKSGVLGLVCAALG--RDRREPLEDLA-ALR 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWL 122 VR D R V LRDY T G T+ + R YL DA F V L Sbjct 59 MGVRVD-------REGVP-LRDYQTATGVLIASGKADPRRTVVSPRFYLSDAVFLVGLES 110 Query 123 TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGT-CQASDPQKALLNYEPV 177 A ++ ++ A+ +P + LGR+S P+FL +D AL Y P+ Sbjct 111 ADSA--LLERIQGALRRPVWPLALGRKSFVPGMPVFLADGLLHADLLSALSGYPPL 164 >ref|YP_002919861.1| CRISPR-associated Cse5e family protein [Klebsiella pneumoniae NTUH-K2044] dbj|BAH63794.1| CRISPR-associated Cse5e family protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length=240 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 18/178 (10%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDT---SSLQALSES 60 Y++L L GP+Q+WG + G R T FPTRSG+LGL+ G + + + L Sbjct 9 YMLLWLEGPLQSWGGDSKFGVRDTLNFPTRSGILGLICCARGAAGPEVEWLAEMNNLPME 68 Query 61 VQFAVRCD--------ELILDDRRVSVTGLRD---YHTVLGAR-EDYRGLKSHETIQTWR 108 V+ R D E L D ++ +G D + ++L + D + T T+R Sbjct 69 VRAYARTDKEGQPLLREPTLCDFQMVGSGYDDSDPWQSLLIPKTSDGKKAVGGGTKMTYR 128 Query 109 EYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASD 166 YL DA F V + L + L +A+ P + YLGR+SC + ++ G +++ Sbjct 129 HYLQDAVFAVVMGL---GSQQAESLPEALQNPVWDLYLGRKSCVPSELIYQGIYDSAE 183 >ref|YP_003366554.1| CRISPR-associated protein [Citrobacter rodentium ICC168] emb|CBG89779.1| CRISPR-associated protein [Citrobacter rodentium ICC168] Length=248 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R T P+RS LLGLL A LGI+RDD + L+A + Sbjct 1 MNHYLVFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAALGIERDDEARLKAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 F + E RDYHTV +E R E +Q + R+ Sbjct 61 YTFLLCASE--------GPRWARDYHTVQMPKEVRKARYFSRREELQDPDLLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L++A+ P +T Y GR+S Sbjct 113 YYSDAWWMVAMASTSGAPYSLEQLQEALRHPVFTLYAGRKS 153 >gb|EFY11131.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gb|EFY18550.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gb|EFY20831.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] 31 more sequence titles

gb|EFY25673.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gb|EFY30126.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gb|EFY32748.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gb|EFY40854.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gb|EFY46230.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gb|EFY49864.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gb|EFY53898.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gb|EFY60718.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gb|EFY63526.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gb|EFY67375.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gb|EFY73917.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gb|EFY77061.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gb|EFY82289.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gb|EFZ81278.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gb|EFZ83151.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gb|EFZ90062.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gb|EFZ92675.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gb|EFZ94801.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gb|EFZ99546.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gb|EGA06892.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gb|EGA10614.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gb|EGA14832.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gb|EGA19021.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gb|EGA23024.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gb|EGA28675.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gb|EGA33722.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gb|EGA34913.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gb|EGA40907.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gb|EGA46826.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gb|EGA51024.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gb|EGA54495.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287]

Length=248 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 79/161 (49%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+RD+ L A + Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 QF + C + RDYHTV +E R E +Q + R+ Sbjct 61 YQFLL-CAS-------GNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + +A+ TP A +++L+ A+ P + YLGR+S Sbjct 113 YYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKS 153 >gb|EGI92820.1| CRISPR-associated protein family protein [Shigella dysenteriae 155-74] Length=225 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 19/137 (13%) Query 25 RPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRD 84 R T P+RS LLGLL A +GI+RDDT L A + V + RD Sbjct 2 RHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASR--------NPRWARD 53 Query 85 YHTV-----------LGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISEL 133 YHTV RE+ + I + R+Y DA + VA+ T A ++ +L Sbjct 54 YHTVQMPKEVRKARYFSRREELSNPELLSAIISRRDYYTDAWWMVAVATTADAPYILEQL 113 Query 134 EKAVLKPRYTPYLGRRS 150 ++ + P + YLGR+S Sbjct 114 QEGLRHPVFPFYLGRKS 130 >ref|YP_002147838.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gb|ACH48730.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length=248 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 79/161 (49%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+RD+ L A + Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 QF + C + RDYHTV +E R E +Q + R+ Sbjct 61 YQFLL-CAS-------GNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + +A+ TP A +++L+ A+ P + YLGR+S Sbjct 113 YYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKS 153 >emb|CCB82589.1| CRISPR-associated protein [Lactobacillus pentosus MP-10] Length=241 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 20/167 (11%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 + +RL P+Q++G R + +P++S ++GL+ A LG +R D S +Q L++ + +A Sbjct 4 VTIRLTAPLQSYGDEANFDHRTSYDYPSKSAIVGLIAAALGYRRTD-SRIQTLNQ-LDYA 61 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTP 124 VR D+ L D+ V E RG + T+R+YL DA F A+ Sbjct 62 VRIDQ--------PAEPLTDFQIV----EWKRGKRK----LTYRDYLQDAVFLAAVGSED 105 Query 125 HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKAL 171 A +I + A+ PR+ LGRR+ P+ S+P + L Sbjct 106 DA--LIDRIYWALHHPRFQLSLGRRANVPAGPIMTEIALGSNPAQVL 150 >ref|ZP_02832354.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gb|EDZ29665.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] emb|CBY97116.1| Uncharacterized protein ygcI Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length=248 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+RD+ L A + Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 QF + C + RDYHTV +E R E +Q + R+ Sbjct 61 YQFLL-CAS-------GNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + +A+ TP A +++L+ ++ P + YLGR+S Sbjct 113 YYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKS 153 >ref|ZP_02697833.1| crispr-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gb|EDX51785.1| crispr-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length=248 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+RD+ L A + Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 QF + C + RDYHTV +E R E +Q + R+ Sbjct 61 YQFLL-CAS-------GNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + +A+ TP A +++L+ ++ P + YLGR+S Sbjct 113 YYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKS 153 >ref|YP_002016082.1| CRISPR-associated protein Cas5 family protein [Prosthecochloris aestuarii DSM 271] gb|ACF46435.1| CRISPR-associated protein Cas5 family [Prosthecochloris aestuarii DSM 271] Length=243 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 28/179 (15%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 YL+L L P+Q+WG + G R T FPT+SG+LG+L LG + L+ ++ Q Sbjct 5 YLLLWLEAPLQSWGADSRFGRRGTLEFPTKSGVLGMLCCSLGAGGEQKELLEKMAPLKQS 64 Query 64 AV--------RCDELILDDRRVSVTGLRDYHTVLGAREDYRGL-------KSHETIQ--- 105 A+ R +E+ DR LRD+H V +D KS T Sbjct 65 AISFCRTSKFRQEEIKKLDRE---PLLRDFHMVGSGYDDKNPWETLLIPKKSDGTTAVNG 121 Query 106 ----TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 T+R YL DA F V + + + ++ A+ P + Y GR+ C T ++ G Sbjct 122 GSKITYRYYLQDAVFAVIMEVPSEKLTLFAD---ALENPCWDIYFGRKCCAPTDFIYRG 177 >ref|ZP_02343962.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] ref|ZP_02656076.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] ref|ZP_03077666.1| crispr-associated protein Cas5, ecoli subtype [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] 9 more sequence titles Length=248 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+RD+ L A + Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 QF + C + RDYHTV +E R E +Q + R+ Sbjct 61 YQFLL-CAS-------GNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + +A+ TP A +++L+ ++ P + YLGR+S Sbjct 113 YYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKS 153 >ref|ZP_07402672.1| CRISPR system CASCADE complex protein CasD [Corynebacterium matruchotii ATCC 14266] gb|EFM49979.1| CRISPR system CASCADE complex protein CasD [Corynebacterium matruchotii ATCC 14266] Length=223 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 85/201 (42%), Gaps = 37/201 (18%) Query 1 MRSYLILRLAGPMQAWGQPTFEGT--RPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALS 58 M L +RLAGP+Q+W P G R R PTRSGL+GLL G R + Sbjct 1 MTEALYIRLAGPLQSWAGPAITGNFVRTEPR-PTRSGLVGLLAGACGYGRGEYPEWLT-- 57 Query 59 ESVQFAVRCDE--LILDD---------------RRVSVTGLRDYHTVLGAREDYRGLKSH 101 + F +R D ++DD R + G R +L + D +GL Sbjct 58 -QLHFQIREDNRGTLVDDFHTINPRDTEEEFRSRLLLAMGQRPTKKLLNSTPDGQGL--- 113 Query 102 ETIQTWREYLCDASFTVALWLTP--HATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFL 159 T T R Y+ D F V + H ++ +L+ +P + YLGR++ + P +L Sbjct 114 -TAITERTYIADGEFIVQIKAGSREHQELLAEKLQ----QPHFVTYLGRKAFAPSFPFYL 168 Query 160 GTCQASDPQKALLNYEPVGGD 180 G + P L VGG+ Sbjct 169 G----AGPDDTLARIPTVGGE 185 >ref|NP_461861.1| cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] ref|ZP_02574276.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gb|AAL21820.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 7 more sequence titles Length=248 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+RD+ L A + Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 QF + C + RDYHTV +E R E +Q + R+ Sbjct 61 YQFLL-CAS-------GNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + +A+ TP A +++L+ ++ P + YLGR+S Sbjct 113 YYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKS 153 >ref|YP_002479512.1| CRISPR-associated protein Cas5 family [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gb|ACL48834.1| CRISPR-associated protein Cas5 family [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length=249 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 42/225 (18%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR---DDTSSLQALSESV 61 L LRL PM ++G + R T P++S + G+L A G+ R ++ + LQ ++ Sbjct 8 LALRLQAPMLSFGNESRFNRRCTASLPSKSVVAGMLCAAKGLHRGSVEEQAFLQQVAAIP 67 Query 62 QFAV---RCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTV 118 +V RC D ++ D+HTV G R+ G+K T R YL D+SF V Sbjct 68 MLSVAIPRCLSANGKDWLLAAGRTVDFHTVQGTRKAAGGIKDCHI--TTRHYLHDSSFAV 125 Query 119 ALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVG 178 L P+ V+ + +A+ P + ++GR+ C + P+F Sbjct 126 FLN-GPY--RVLEDAARALQNPVWGLWIGRKCCIPSAPVF-------------------- 162 Query 179 GDIYSEESVTGHHLKFTARDEPMITLPRQFAS--REWYVIKGGMD 221 G ++S E+V +H M+ P +F + RE + + G D Sbjct 163 GGLFSSEAVALNH---------MLDAPLEFFTHEREVHSFEDGND 198 >ref|YP_745517.1| hypothetical protein GbCGDNIH1_1696 [Granulibacter bethesdensis CGDNIH1] gb|ABI62594.1| hypothetical protein GbCGDNIH1_1696 [Granulibacter bethesdensis CGDNIH1] Length=234 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 10/157 (6%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 +L+L+ P+ ++G T + T FP S + GLL LG+ R DT+ L L E + F Sbjct 3 WLVLQWRAPLASFGGTTIDSRGVTRDFPALSAVTGLLANALGLDRTDTTQLDRLQERIVF 62 Query 64 AVRCDELIL----DDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQT---WREYLCDASF 116 R ++ L D + ++ G D R + R S+ T R+Y D Sbjct 63 GARREQEPLLGRMTDFQTALLGSNDRGWTTRGRVEGRDGASNAEASTHIRQRDYHADMQM 122 Query 117 TVALWLTPHATMV--ISELEKAVLKPRYTPYLGRRSC 151 TV L LT HA + ++ KA+LKP + GR+ C Sbjct 123 TVVLHLT-HAEEAPTLDDIAKALLKPARPLFFGRKPC 158 >ref|ZP_02667616.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] ref|YP_002046898.1| CRISPR-associated protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gb|ACF67898.1| CRISPR-associated protein (Cas_Cas5e) [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gb|EDZ24735.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length=248 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+RD+ L A + Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHDLPSRSALLGLLAAALGIRRDEEERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 QF + C + RDYHTV +E R E +Q + R+ Sbjct 61 YQFLL-CSS-------GNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + +A+ TP A +++L+ ++ P + YLGR+S Sbjct 113 YYTDAWWMIAVSATPDAPYSLAQLQASLQHPVFPLYLGRKS 153 >ref|YP_002227682.1| hypothetical protein SG2843 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] ref|YP_002244851.1| hypothetical protein SEN2779 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] emb|CAR38651.1| hypothetical protein SG2843 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] emb|CAR34358.1| hypothetical protein SEN2779 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gb|EGE35334.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Gallinarum str. SG9] Length=248 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 78/161 (48%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+RD+ L + Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNTFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 QF + C + RDYHTV +E R E +Q + R+ Sbjct 61 YQFLL-CAS-------GNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + +A+ TP A +++L+ A+ P + YLGR+S Sbjct 113 YYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKS 153 >ref|YP_002216907.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gb|ACH75914.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gb|EGE31015.1| CRISPR-associated protein Cas5 [Salmonella enterica subsp. enterica serovar Dublin str. SD3246] Length=248 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+RD+ L A + Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHDLPSRSALLGLLAAALGIRRDEEERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 QF + C + RDYHTV +E R E +Q + R+ Sbjct 61 YQFLL-CAS-------GNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + +A+ TP A +++L+ ++ P + YLGR+S Sbjct 113 YYTDAWWMIAVSATPDAPYSLAQLQASLQHPVFPLYLGRKS 153 >ref|YP_409117.1| cytoplasmic protein [Shigella boydii Sb227] gb|ABB67289.1| putative cytoplasmic protein [Shigella boydii Sb227] gb|EGI96933.1| CRISPR-associated protein Cas5 domain protein [Shigella boydii 3594-74] Length=248 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 72/161 (44%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R T P+ S LLGLL A +GI+RDDT L A + Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSLSALLGLLAAGVGIRRDDTERLNAFNRH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 V + RDYHTV RE+ + I + R+ Sbjct 61 YSLVVCASR--------NPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ T A + +L+ + P + YLGR+S Sbjct 113 YYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKS 153 >ref|YP_002299509.1| CRISPR-associated protein, CT1976 family [Rhodospirillum centenum SW] gb|ACJ00697.1| CRISPR-associated protein, CT1976 family [Rhodospirillum centenum SW] Length=280 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 82/191 (42%), Gaps = 28/191 (14%) Query 3 SYLILRLAGPMQAWGQPTFEGT----RPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALS 58 ++L LA P AWG + + T P+RS L GLLGA LG++R + L LS Sbjct 6 AHLCFTLAAPYGAWGAASQSSATTAWKATELDPSRSALTGLLGAALGLER---AHLGRLS 62 Query 59 ESVQFAVRCDELILDDRRVSVTGLRDYHTVLGA---------------REDYRGLKSHET 103 E+++FAVR D + DYHT+ A R G K Sbjct 63 EALRFAVRTGIRPTRDPQP------DYHTISRAHRPEGREHWSRFEELRPALAGGKQEGA 116 Query 104 IQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ 163 + + REY +TVA+ A + + L +A+ P + Y GR++C L P Sbjct 117 LLSRREYWSLGLWTVAVATLNPAGVPLDRLAQALRTPHWPLYAGRKACTLGLPPDPEVRT 176 Query 164 ASDPQKALLNY 174 P LL+Y Sbjct 177 GPGPLSVLLDY 187 >ref|YP_001960549.1| CRISPR-associated protein Cas5 family [Chlorobium phaeobacteroides BS1] gb|ACE05068.1| CRISPR-associated protein Cas5 family [Chlorobium phaeobacteroides BS1] Length=233 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 14/169 (8%) Query 2 RSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGI---QRDDTSSLQALS 58 +S+L+L L P+Q+WG + G R T FPT+SG+LG+L LG Q++ + + L Sbjct 3 KSFLLLWLEAPLQSWGADSRFGRRGTIDFPTKSGILGMLCCALGAGGEQKELLAEMGKLR 62 Query 59 ESVQFAVRCD--ELILDDRRVSVTGLRDYH----TVLGAREDYRGLKSHETIQTWREYLC 112 ++V R E +L D + +G D + ++ + D + + T+R YL Sbjct 63 QTVLSFRRSKEREALLRDFHMVGSGYDDKNPWETLLIPKKSDGTPAVNGGSKITYRYYLQ 122 Query 113 DASFTVALWL-TPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG 160 DA+F V + + +T+ LE P + Y GR+ C T ++ G Sbjct 123 DAAFAVITEVPSGKSTLFADSLE----NPCWDIYFGRKCCAPTDFIYRG 167 >ref|YP_002500558.1| CRISPR-associated protein Cas5 family [Methylobacterium nodulans ORS 2060] gb|ACL60255.1| CRISPR-associated protein Cas5 family [Methylobacterium nodulans ORS 2060] Length=273 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 68/172 (39%), Gaps = 29/172 (16%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M + L+ L P G R + P RS +LGL+ LGI R D + AL Sbjct 1 MPAGLVFTLYAPFAGMGDVAVGEERGSFDRPARSAVLGLVAGALGIDRADEAGHAALDRG 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV----------LGAREDYRGLKSHETIQTWREY 110 + A+R R + DYHTV R + + T+ + R Y Sbjct 61 YRLALRL--------RTPGCLVEDYHTVQAPPVDRKARWATRREALAVAGLNTLVSRRAY 112 Query 111 LCDASFTVALW-----LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPL 157 D V L TP A L A+ +P + PYLGR+SCPL PL Sbjct 113 RADPIVDVVLIHVDEGPTPEA------LATALRRPTFAPYLGRKSCPLGLPL 158 >ref|ZP_06550463.1| CRISPR-associated protein cas5, subtype [Klebsiella sp. 1_1_55] gb|EFD84086.1| CRISPR-associated protein cas5, subtype [Klebsiella sp. 1_1_55] Length=248 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+R++ L A ++ Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRREEEQRLNAFNQH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTV-----------LGAREDYRGLKSHETIQTWRE 109 F + RDYHTV RE+ + + + + R+ Sbjct 61 YSFLLCASS--------EPRWARDYHTVQMPKEVRKACYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + VA+ +TP A + +L +A+ P + YLGR+S Sbjct 113 YYTDAWWMVAVAVTPDAPYTLEQLHEALRYPVFPLYLGRKS 153 >ref|ZP_06014707.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gb|EEW42241.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length=248 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+R++ L A ++ Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRREEEQRLNAFNQH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 F + C RDYHTV +E R E +Q + R+ Sbjct 61 YSFLL-CAS-------SEPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + +A+ +TP A + +L +A+ P + YLGR+S Sbjct 113 YYTDAWWMIAVAVTPDAPYSLEQLHEALRYPVFPLYLGRKS 153 >ref|ZP_08307346.1| CRISPR system CASCADE complex protein CasD [Klebsiella sp. MS 92-3] gb|EGF60540.1| CRISPR system CASCADE complex protein CasD [Klebsiella sp. MS 92-3] Length=248 Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YL+ +L GPM +WG R + P+RS LLGLL A LGI+R++ L A ++ Sbjct 1 MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRREEEQRLNAFNQH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 F + C RDYHTV +E R E +Q + R+ Sbjct 61 YSFLL-CAS-------SEPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + +A+ +TP A + +L +A+ P + YLGR+S Sbjct 113 YYTDAWWMIAVAVTPDAPYSLEQLHEALRYPVFPLYLGRKS 153 >ref|YP_004411733.1| CRISPR-associated protein Cas5 family [Spirochaeta coccoides DSM 17374] gb|AEC02351.1| CRISPR-associated protein Cas5 family [Spirochaeta coccoides DSM 17374] Length=232 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 21/184 (11%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 YL L L P+Q+WG + G R T FPT+SG+ GL+ + +G Q L LS Q+ Sbjct 3 YLALWLEAPLQSWGSNSKFGRRDTEIFPTKSGIYGLILSAMGKQGPQDDFLARLSSLRQY 62 Query 64 AVRCDELILDDRRVSVTGLRDYHTV--------------LGAREDYRGLKSHETIQTWRE 109 + + L D+H V + + D + T+R Sbjct 63 IIAYSY----NTHTKPDILMDFHMVGSGYDASAPWERLLIPKKADGTPAVGGGSKITYRY 118 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQK 169 YL D SF V + +++ A+ P Y +LGR++C T ++ G + D K Sbjct 119 YLQDVSFGVIQEMHEDFE---NDVSHALQFPVYDLFLGRKNCVPTEFIYRGCFNSFDEAK 175 Query 170 ALLN 173 +L+ Sbjct 176 EVLD 179 >ref|YP_474206.1| CRISPR-associated Cas5 family protein [Synechococcus sp. JA-3-3Ab] gb|ABC98943.1| CRISPR-associated protein Cas5, Ecoli subtype [Synechococcus sp. JA-3-3Ab] Length=207 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 31/162 (19%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSESVQF 63 L++RL PM +WG + R + R PT+S ++G+L A LG R + L AL V Sbjct 4 LLMRLRAPMMSWGDHSQFDYRDSRREPTKSAVIGILCAALGRPRWEPVDDLAALKMGV-- 61 Query 64 AVRCDELILDDRRVSVTGL--RDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALW 121 RV+ G+ +D+HTV + ETI R Y+ D + V L Sbjct 62 ------------RVNKEGILCKDFHTV----------QIKETISN-RYYVADGDYLVGLE 98 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQ 163 P+ ++ L++A+ KP + +LGR+S + PL +G + Sbjct 99 GDPN---LLRTLDQALQKPYWQVFLGRKSFIPSRPLRVGLVE 137 >ref|ZP_08219864.1| CRISPR-associated Cas5 family protein [Streptomyces clavuligerus ATCC 27064] Length=252 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/252 (27%), Positives = 98/252 (38%), Gaps = 69/252 (27%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFA 64 ++L LAGP+Q WG + T PT+SG+ GL+ A LG +R D L L+ V FA Sbjct 4 VLLHLAGPLQTWGATSRWDEHTTLTRPTKSGITGLVAAALGRERAD--PLDDLTALV-FA 60 Query 65 VRCDELILDDRRVSVTGLRDYHTVLGAR----------------EDYRGLKSHETIQ--- 105 VRC DR +T D+HT G + + G H T+ Sbjct 61 VRC------DRPGHLTA--DFHTAGGGSFGPPPPQHAHRTGLDPDRWYGAPRHPTLTPAA 112 Query 106 ----------------TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRR 149 T R YL DA+F L H + + A+ P LGRR Sbjct 113 ERGTPPWRPEDRTAVLTRRHYLADAAFLAGLSTPDH--HLAHRIAHALTHPARLLCLGRR 170 Query 150 SCPLTHPLFLGTCQ---------------ASDPQKALLNYEPVGGDI--YSEESVTGHHL 192 SCP PL T + A+ P + P G ++E++ T H + Sbjct 171 SCPPAQPLHHSTTRHGPRTWPDRIPLLPSATTPTPLVWTETPPGPGTTAHAEQTPTTHQM 230 Query 193 KFTARDEPMITL 204 RD P++ L Sbjct 231 ----RDHPLMHL 238 >ref|YP_003321655.1| CRISPR-associated protein Cas5 family [Sphaerobacter thermophilus DSM 20745] gb|ACZ40833.1| CRISPR-associated protein Cas5 family [Sphaerobacter thermophilus DSM 20745] Length=245 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 24/166 (14%) Query 3 SYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQ 62 S L+LRL GPMQAWG + R TG P++SG++GLL A LG R ++ + L+ ++ Sbjct 2 STLLLRLTGPMQAWGTQSRFSWRDTGLEPSKSGVIGLLCAALGRPR--SAPVDDLAR-LR 58 Query 63 FAVRCDELILDDRRVSVTGLRDYHTVLG---------AREDYRGLKSHETIQTWREYLCD 113 VR D T D+HT G D G I R YL D Sbjct 59 MGVRVDR--------EGTMHVDFHTAGGWHRRAEAGYGVPDPSGTARRPQISR-RFYLAD 109 Query 114 ASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFL 159 A F V L ++ L++A+ PR+ +LGR+S P+ L Sbjct 110 ADFLVGL---EGDEELLVLLDRALAAPRWQLFLGRKSFVPAAPVRL 152 >ref|ZP_06355215.1| CRISPR-associated protein Cas5 [Citrobacter youngae ATCC 29220] gb|EFE06767.1| CRISPR-associated protein Cas5 [Citrobacter youngae ATCC 29220] Length=248 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 19/161 (11%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M YLI +L GPM +WG R + P+RS LLGLL A LGI+RD+ + L ++ Sbjct 1 MSQYLIFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEDARLNDFNQH 60 Query 61 VQFAVRCDELILDDRRVSVTGLRDYHTVLGARE--DYRGLKSHETIQ---------TWRE 109 F + + RDYHTV +E R E +Q + R+ Sbjct 61 YAFLLCASK--------EPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRD 112 Query 110 YLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRS 150 Y DA + + + TP A + +L A+ P + YLGR+S Sbjct 113 YYTDAWWMMGVSATPDAPYSLEQLRDALQHPVFPLYLGRKS 153 >ref|YP_002434079.1| CRISPR-associated protein Cas5 family [Desulfatibacillum alkenivorans AK-01] gb|ACL06611.1| CRISPR-associated protein Cas5 family [Desulfatibacillum alkenivorans AK-01] Length=240 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 71/242 (29%), Positives = 102/242 (42%), Gaps = 33/242 (13%) Query 4 YLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQF 63 YL++ L P+Q+WG + G R T FPTRSG+LGLL LG + L L+ Q Sbjct 5 YLLMWLEAPLQSWGADSKFGRRDTLPFPTRSGVLGLLLCALGASGEQKELLARLAPYGQT 64 Query 64 AVRCDELILDDRRVSVTG------LRDYHTVLGARED---YRGLKSHETIQ--------- 105 + C S LRD+H V A D + L +T + Sbjct 65 VISCAGGRPGRSGGSPEKIPRQPLLRDFHMVGSAYNDKDPWERLHIPKTNEGKPAVGGGA 124 Query 106 --TWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTC- 162 T+R YL DA F V L L P + + +A+ P + YLGR++C T ++ G Sbjct 125 KLTYRYYLQDARFAVILELPPD---LAEDFAQALQNPVWDIYLGRKNCAPTEFVYQGVFD 181 Query 163 ---QASDPQKALLNYEPVGGDIYSEESVTGHH--LKFTARDEPMITLP-RQFASREWYVI 216 A D AL+ + + D V G H T D P+ P +++ R VI Sbjct 182 SQKDAMDRAAALMEEKELMEDF---RVVDGEHPGEPITLNDVPLQFGPMKKYRDRRVTVI 238 Query 217 KG 218 + Sbjct 239 RN 240 >ref|YP_002484765.1| Cas5 family CRISPR-associated protein [Cyanothece sp. PCC 7425] gb|ACL46404.1| CRISPR-associated protein Cas5 family [Cyanothece sp. PCC 7425] Length=216 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 25/157 (15%) Query 5 LILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQR-DDTSSLQALSESVQF 63 L+LR+ PM +WG + R + R PT+S ++GLL A LG R + + L AL V Sbjct 4 LLLRMRAPMMSWGDHSRFTIRDSRREPTKSAVIGLLCAALGRPRWEAVADLTALKMGV-- 61 Query 64 AVRCDELILDDRRVSVTGLR--DYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALW 121 R++ GL DYHTV + + G K + T+ + R Y+ DA + V Sbjct 62 ------------RINQEGLVQCDYHTVQDSIKS-SGSKGN-TVISHRYYIADADYLVG-- 105 Query 122 LTPHATMVISELEKAVLKPRYTPYLGRR----SCPLT 154 L + L+ A+ P + Y GR+ SCP+ Sbjct 106 LEGSDRHFLESLDSALQSPIWQVYFGRKSFVPSCPVA 142 >ref|YP_003167473.1| Cas5 family CRISPR-associated protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV35544.1| CRISPR-associated protein Cas5 family [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length=237 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 6/177 (3%) Query 1 MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES 60 M +L++RL P+ A+G T + FP S GLL