Blast performed on February-4-2012
BLASTP 2.2.24+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: nr_env
           20,512,688 sequences; 6,167,035,527 total letters



Query=  EG12126 kdpF 
Length=29
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ref|AP_001337.1|  potassium ion accessory transporter subunit [Es...  54.3    7e-06
ref|NP_459692.1|  potassium-transporting ATPase subunit F [Salmon...  52.8    2e-05
ref|ZP_04561149.1|  potassium-transporting ATPase subunit A [Citr...  52.4    3e-05
ref|YP_151248.1|  hypothetical protein SPA2034 [Salmonella enteri...  51.6    4e-05
ref|YP_002214689.1|  K+-transporting ATPase, F subunit [Salmonell...  51.6    5e-05
ref|YP_001909272.1|  hypothetical protein ETA_33660 [Erwinia tasm...  45.8    0.002
ref|YP_003540418.1|  subunit of potassium-transport system [Erwin...  44.7    0.006
ref|YP_002650557.1|  hypothetical protein EpC_35760 [Erwinia pyri...  44.3    0.007
ref|YP_002650553.1|  K+-transporting ATPase, F subunit [Erwinia p...  43.9    0.010
gb|ADP10737.1|  putative K+-transporting ATPase, F subunit [Erwin...  43.1    0.014
emb|CAY76226.1|  hypothetical protein EPYR_03846 [Erwinia pyrifol...  42.7    0.021


>ref|AP_001337.1| potassium ion accessory transporter subunit [Escherichia coli 
str. K-12 substr. W3110]
 ref|YP_588443.1| potassium ion accessory transporter subunit [Escherichia coli 
str. K-12 substr. MG1655]
 ref|YP_001725910.1| K+-transporting ATPase, F subunit [Escherichia coli ATCC 8739]
 22 more sequence titles
 
ref|YP_001729686.1| potassium ion accessory transporter subunit [Escherichia coli 
str. K-12 substr. DH10B]
 ref|YP_002328159.1| potassium ion accessory transporter subunit [Escherichia coli 
O127:H6 str. E2348/69]
 ref|YP_002925761.1| potassium ion accessory transporter subunit [Escherichia coli 
BW2952]
 ref|YP_003043875.1| potassium-transporting ATPase subunit F [Escherichia coli B str. 
REL606]
 ref|YP_003220689.1| potassium ion accessory transporter subunit [Escherichia coli 
O103:H2 str. 12009]
 ref|YP_003227828.1| potassium ion accessory transporter subunit [Escherichia coli 
O26:H11 str. 11368]
 ref|YP_003233235.1| potassium ion accessory transporter subunit [Escherichia coli 
O111:H- str. 11128]
 sp|P36937.1|KDPF_ECOLI RecName: Full=Protein kdpF
 dbj|BAA35357.1| potassium ion accessory transporter subunit [Escherichia coli 
str. K12 substr. W3110]
 gb|ABD18643.1| potassium ion accessory transporter subunit [Escherichia coli 
str. K-12 substr. MG1655]
 gb|ACA78583.1| K+-transporting ATPase, F subunit [Escherichia coli ATCC 8739]
 gb|ACB01908.1| potassium ion accessory transporter subunit [Escherichia coli 
str. K-12 substr. DH10B]
 emb|CAS08136.1| potassium ion accessory transporter subunit [Escherichia coli 
O127:H6 str. E2348/69]
 gb|ACR64080.1| potassium ion accessory transporter subunit [Escherichia coli 
BW2952]
 emb|CAQ31164.1| KdpF, subunit of potassium ion P-type ATPase transporter [Escherichia 
coli BL21(DE3)]
 gb|ACT38339.1| potassium ion accessory transporter subunit [Escherichia coli 
B str. REL606]
 gb|ACT42532.1| potassium ion accessory transporter subunit [Escherichia coli 
BL21(DE3)]
 dbj|BAI24088.1| potassium ion accessory transporter subunit [Escherichia coli 
O26:H11 str. 11368]
 dbj|BAI29555.1| potassium ion accessory transporter subunit [Escherichia coli 
O103:H2 str. 12009]
 dbj|BAI34684.1| potassium ion accessory transporter subunit [Escherichia coli 
O111:H- str. 11128]
 gb|ADT74269.1| potassium ion accessory transporter subunit [Escherichia coli 
W]
 dbj|BAJ42514.1| potassium ion accessory transporter subunit [Escherichia coli 
DH1]
Length=29

 Score = 54.3 bits (129),  Expect = 7e-06, Method: Compositional matrix adjust.
 Identities = 29/29 (100%), Positives = 29/29 (100%), Gaps = 0/29 (0%)

Query  1   MSAGVITGVLLVFLLLGYLVYALINAEAF  29
           MSAGVITGVLLVFLLLGYLVYALINAEAF
Sbjct  1   MSAGVITGVLLVFLLLGYLVYALINAEAF  29


>ref|NP_459692.1| potassium-transporting ATPase subunit F [Salmonella enterica 
subsp. enterica serovar Typhimurium str. LT2]
 ref|YP_215714.1| potassium-transporting ATPase subunit F [Salmonella enterica 
subsp. enterica serovar Choleraesuis str. SC-B67]
 gb|AAL19651.1| putative outer membrane protein [Salmonella enterica subsp. enterica 
serovar Typhimurium str. LT2]
 gb|AAX64633.1| putative outer membrane protein [Salmonella enterica subsp. enterica 
serovar Choleraesuis str. SC-B67]
 emb|CBY94764.1| hypothetical protein predicted by Glimmer/Critica [Salmonella 
enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gb|ADX16448.1| potassium-transporting ATPase subunit F [Salmonella enterica 
subsp. enterica serovar Typhimurium str. ST4/74]
 gb|AEF06627.1| potassium-transporting ATPase subunit F [Salmonella enterica 
subsp. enterica serovar Typhimurium str. UK-1]
Length=29

 Score = 52.8 bits (125),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 27/29 (93%), Positives = 29/29 (100%), Gaps = 0/29 (0%)

Query  1   MSAGVITGVLLVFLLLGYLVYALINAEAF  29
           MSAGVITG++LVFLLLGYLVYALINAEAF
Sbjct  1   MSAGVITGIVLVFLLLGYLVYALINAEAF  29


>ref|ZP_04561149.1| potassium-transporting ATPase subunit A [Citrobacter sp. 30_2]
 gb|EEH92125.1| potassium-transporting ATPase subunit A [Citrobacter sp. 30_2]
Length=51

 Score = 52.4 bits (124),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 26/29 (89%), Positives = 29/29 (100%), Gaps = 0/29 (0%)

Query  1   MSAGVITGVLLVFLLLGYLVYALINAEAF  29
           +SAGVITG++LVFLLLGYLVYALINAEAF
Sbjct  23  VSAGVITGIVLVFLLLGYLVYALINAEAF  51


>ref|YP_151248.1| hypothetical protein SPA2034 [Salmonella enterica subsp. enterica 
serovar Paratyphi A str. ATCC 9150]
 ref|YP_002142733.1| hypothetical protein SSPA1895 [Salmonella enterica subsp. enterica 
serovar Paratyphi A str. AKU_12601]
 ref|YP_002636333.1| hypothetical protein SPC_0717 [Salmonella enterica subsp. enterica 
serovar Paratyphi C strain RKS4594]
 gb|AAV77936.1| hypothetical protein SPA2034 [Salmonella enterica subsp. enterica 
serovar Paratyphi A str. ATCC 9150]
 emb|CAR60094.1| hypothetical protein SSPA1895 [Salmonella enterica subsp. enterica 
serovar Paratyphi A str. AKU_12601]
 gb|ACN44892.1| hypothetical protein SPC_0717 [Salmonella enterica subsp. enterica 
serovar Paratyphi C strain RKS4594]
 gb|ACY87330.1| K+-transporting ATPase, F subunit [Salmonella enterica subsp. 
enterica serovar Typhimurium str. 14028S]
Length=65

 Score = 51.6 bits (122),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 26/29 (89%), Positives = 29/29 (100%), Gaps = 0/29 (0%)

Query  1   MSAGVITGVLLVFLLLGYLVYALINAEAF  29
           +SAGVITG++LVFLLLGYLVYALINAEAF
Sbjct  37  VSAGVITGIVLVFLLLGYLVYALINAEAF  65


>ref|YP_002214689.1| K+-transporting ATPase, F subunit [Salmonella enterica subsp. 
enterica serovar Dublin str. CT_02021853]
 gb|ACH76194.1| K+-transporting ATPase, F subunit [Salmonella enterica subsp. 
enterica serovar Dublin str. CT_02021853]
 gb|EGE28790.1| K+-transporting ATPase, F subunit [Salmonella enterica subsp. 
enterica serovar Dublin str. SD3246]
Length=65

 Score = 51.6 bits (122),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 26/29 (89%), Positives = 29/29 (100%), Gaps = 0/29 (0%)

Query  1   MSAGVITGVLLVFLLLGYLVYALINAEAF  29
           +SAGVITG++LVFLLLGYLVYALINAEAF
Sbjct  37  VSAGVITGIVLVFLLLGYLVYALINAEAF  65


>ref|YP_001909272.1| hypothetical protein ETA_33660 [Erwinia tasmaniensis Et1/99]
 emb|CAO98412.1| Hypothetical protein ETA_33660 [Erwinia tasmaniensis Et1/99]
Length=72

 Score = 45.8 bits (107),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 22/29 (75%), Positives = 26/29 (89%), Gaps = 0/29 (0%)

Query  1   MSAGVITGVLLVFLLLGYLVYALINAEAF  29
           +S  VITG++LVF+LLGYLVYALINAE F
Sbjct  44  VSIAVITGIVLVFILLGYLVYALINAETF  72


>ref|YP_003540418.1| subunit of potassium-transport system [Erwinia amylovora ATCC 
49946]
 emb|CBJ48034.1| subunit of potassium-transport system [Erwinia amylovora ATCC 
49946]
Length=29

 Score = 44.7 bits (104),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 21/29 (72%), Positives = 26/29 (89%), Gaps = 0/29 (0%)

Query  1   MSAGVITGVLLVFLLLGYLVYALINAEAF  29
           MS  V+TG++LVF+LLGYL+YALINAE F
Sbjct  1   MSITVMTGIVLVFMLLGYLIYALINAETF  29


>ref|YP_002650557.1| hypothetical protein EpC_35760 [Erwinia pyrifoliae Ep1/96]
 emb|CAX57356.1| Conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96]
Length=47

 Score = 44.3 bits (103),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 21/28 (75%), Positives = 25/28 (89%), Gaps = 0/28 (0%)

Query  2   SAGVITGVLLVFLLLGYLVYALINAEAF  29
           S  V+TG++LVF+LLGYLVYALINAE F
Sbjct  20  SITVMTGIVLVFMLLGYLVYALINAETF  47


>ref|YP_002650553.1| K+-transporting ATPase, F subunit [Erwinia pyrifoliae Ep1/96]
 emb|CAX57352.1| putative K+-transporting ATPase, F subunit [Erwinia pyrifoliae 
Ep1/96]
 emb|CAY76222.1| hypothetical protein EPYR_03842 [Erwinia pyrifoliae DSM 12163]
Length=47

 Score = 43.9 bits (102),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 25/28 (89%), Gaps = 0/28 (0%)

Query  2   SAGVITGVLLVFLLLGYLVYALINAEAF  29
           S  V+TG++LVF+LLGYL+YALINAE F
Sbjct  20  SITVMTGIVLVFMLLGYLIYALINAETF  47


>gb|ADP10737.1| putative K+-transporting ATPase, F subunit [Erwinia sp. Ejp617]
Length=37

 Score = 43.1 bits (100),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 25/28 (89%), Gaps = 0/28 (0%)

Query  2   SAGVITGVLLVFLLLGYLVYALINAEAF  29
           S  V+TG++LVF+LLGYL+YALINAE F
Sbjct  10  SITVMTGIVLVFMLLGYLIYALINAETF  37


>emb|CAY76226.1| hypothetical protein EPYR_03846 [Erwinia pyrifoliae DSM 12163]
Length=47

 Score = 42.7 bits (99),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 24/28 (85%), Gaps = 0/28 (0%)

Query  2   SAGVITGVLLVFLLLGYLVYALINAEAF  29
           S  V+TG++LVF+ LGYLVYALINAE F
Sbjct  20  SITVMTGIVLVFMXLGYLVYALINAETF  47



Lambda     K      H
   0.335    0.151    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 152124619375


  Database: nr_env
    Posted date:  Feb 1, 2012  7:14 AM
  Number of letters in database: 6,167,035,527
  Number of sequences in database:  20,512,688



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40