BLAST Search Results

Blast performed on February-3-2012 BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: nr_env 20,512,688 sequences; 6,167,035,527 total letters Query= EG11193 dinD Length=274 Score E Sequences producing significant alignments: (Bits) Value ref|AP_004147.1| DNA-damage-inducible protein [Escherichia coli ... 569 2e-160 gb|AAA61998.1| o278 [Escherichia coli] >gb|ADI22280.1| hypotheti... 568 2e-160 ref|ZP_07163973.1| putative DNA-damage-inducible protein D [Esch... 564 5e-159 ref|ZP_05439489.1| DNA-damage-inducible protein D [Escherichia s... 564 6e-159 gb|AEE58968.1| DNA-damage-inducible protein [Escherichia coli UM... 561 3e-158 gb|EGB31192.1| dinD protein [Escherichia coli E1520] 560 6e-158 gb|EGK15757.1| DNA-damage-inducible protein D [Shigella flexneri... 558 2e-157 ref|YP_691198.1| DNA-damage-inducible protein D [Shigella flexne... 558 3e-157 ref|ZP_07183197.1| putative DNA-damage-inducible protein D [Esch... 557 6e-157 ref|ZP_08366171.1| DNA-damage-inducible protein D [Escherichia c... 557 8e-157 ref|NP_709424.1| DNA-damage-inducible protein D [Shigella flexne... 556 1e-156 gb|ADA75992.1| DNA-damage-inducible protein [Shigella flexneri 2... 556 1e-156 ref|YP_002331371.1| DNA-damage-inducible protein D [Escherichia ... 556 1e-156 gb|EFZ58882.1| DNA-damage-inducible protein D [Escherichia coli ... 555 3e-156 emb|CBG36804.1| dna-damage-inducible protein D [Escherichia coli... 555 4e-156 ref|YP_002414798.1| DNA-damage-inducible protein D [Escherichia ... 555 4e-156 gb|EGK17370.1| DNA-damage-inducible protein D [Shigella flexneri... 554 6e-156 ref|ZP_06651192.1| dinD [Escherichia coli FVEC1412] >ref|ZP_0699... 554 6e-156 ref|ZP_07136262.1| putative DNA-damage-inducible protein D [Esch... 477 7e-133 ref|YP_859240.1| DNA-damage-inducible protein D [Escherichia col... 476 2e-132 ref|YP_671616.1| DNA-damage-inducible protein D [Escherichia col... 475 3e-132 ref|YP_001745945.1| DNA-damage-inducible protein D [Escherichia ... 475 3e-132 gb|ABB68206.1| DNA-damage-inducible protein [Shigella boydii Sb227] 475 3e-132 ref|ZP_07095340.1| putative DNA-damage-inducible protein D [Esch... 475 4e-132 ref|ZP_03051328.1| DNA-damage-inducible protein D [Escherichia c... 475 4e-132 ref|YP_410034.2| DNA-damage-inducible protein D [Shigella boydii... 474 4e-132 ref|YP_002410043.1| DNA-damage-inducible protein D [Escherichia ... 474 6e-132 ref|YP_002405033.1| DNA-damage-inducible protein D [Escherichia ... 473 1e-131 ref|YP_001465126.1| DNA-damage-inducible protein D [Escherichia ... 473 1e-131 gb|EGI90009.1| DNA-damage-inducible protein D [Shigella boydii 5... 473 1e-131 gb|ABB63994.1| DNA-damage-inducible protein [Shigella dysenteria... 473 2e-131 ref|YP_405485.2| DNA-damage-inducible protein D [Shigella dysent... 472 2e-131 ref|ZP_07692001.1| putative DNA-damage-inducible protein D [Esch... 471 4e-131 gb|AAZ90305.1| DNA-damage-inducible protein [Shigella sonnei Ss046] 471 5e-131 ref|YP_312540.2| DNA-damage-inducible protein D [Shigella sonnei... 471 6e-131 ref|ZP_06659733.1| dinD [Escherichia coli B185] >gb|EFF04130.1| ... 471 8e-131 ref|ZP_03063629.1| DNA-damage-inducible protein D [Shigella dyse... 469 2e-130 ref|ZP_04640583.1| DNA-damage-inducible protein D [Yersinia moll... 466 2e-129 ref|YP_003470243.1| DNA-damage-inducible protein, part of SOS re... 461 4e-128 ref|ZP_04872898.1| DNA-damage-inducible protein D [Escherichia s... 455 3e-126 ref|YP_001723079.1| DNA-damage-inducible protein D [Escherichia ... 455 3e-126 emb|CBJ03393.1| dna-damage-inducible protein D [Escherichia coli... 453 1e-125 gb|AAG58789.1|AE005591_13 DNA-damage-inducible protein [Escheric... 451 5e-125 ref|NP_290225.2| DNA-damage-inducible protein D [Escherichia col... 451 6e-125 ref|ZP_02778477.1| DNA-damage-inducible protein D [Escherichia c... 449 2e-124 ref|ZP_05938453.1| DNA-damage-inducible protein D [Escherichia c... 448 6e-124 ref|ZP_03832069.1| DNA-damage-inducible protein D [Pectobacteriu... 420 1e-115 ref|ZP_04638136.1| DNA-damage-inducible protein D [Yersinia inte... 417 1e-114 ref|YP_003710540.1| DNA-damage-inducible protein [Xenorhabdus ne... 408 5e-112 gb|ADI21503.1| hypothetical protein [uncultured myxobacterium HF... 408 5e-112 ref|YP_002017876.1| hypothetical protein Ppha_0973 [Pelodictyon ... 403 1e-110 ref|ZP_07782197.1| DNA-damage-inducible D domain protein [Escher... 400 8e-110 ref|YP_001337739.1| DNA-damage-inducible protein D [Klebsiella p... 397 1e-108 ref|YP_393456.1| DNA-damage-inducible protein D [Sulfurimonas de... 390 2e-106 ref|YP_001344928.1| DNA-damage-inducible protein D [Actinobacill... 390 2e-106 ref|ZP_07143483.1| putative DNA-damage-inducible protein D [Esch... 387 1e-105 ref|YP_002007188.1| DNA-damage-inducible protein d [Cupriavidus ... 356 2e-96 ref|ZP_07328980.1| DNA-damage-inducible protein D [Acetivibrio c... 353 2e-95 ref|ZP_02353916.1| putative DNA-damage-inducible protein [Burkho... 348 7e-94 ref|ZP_08305192.1| putative DNA-damage-inducible protein D [Kleb... 338 5e-91 ref|ZP_02477549.1| DNA-damage-inducible protein D [Haemophilus p... 336 2e-90 ref|ZP_07334163.1| DNA-damage-inducible protein D [Desulfovibrio... 331 6e-89 ref|ZP_06996513.1| DNA-damage-inducible protein D [Bacteroides s... 326 2e-87 ref|YP_002389121.1| DNA-damage-inducible protein D [Escherichia ... 325 5e-87 ref|YP_002001192.1| DNA-damage-inducible protein D [Neisseria go... 325 5e-87 ref|ZP_07959368.1| DNA-damage-inducible protein d [Lachnospirace... 322 3e-86 ref|ZP_06735000.1| DNA-damage-inducible protein D [Neisseria elo... 320 2e-85 ref|YP_003249272.1| DNA-damage-inducible protein D [Fibrobacter ... 320 2e-85 ref|ZP_06864064.1| DNA-damage-inducible protein D [Neisseria pol... 319 2e-85 ref|YP_004048981.1| DNA damage inducible protein [Neisseria lact... 316 2e-84 emb|CBL14929.1| hypothetical protein RBR_05470 [Ruminococcus bro... 314 1e-83 ref|YP_207561.1| DNA-damage-inducible protein D [Neisseria gonor... 313 2e-83 ref|YP_003831239.1| DNA-damage-inducible protein [Butyrivibrio p... 307 1e-81 gb|EGL77555.1| DNA-damage-inducible protein D family protein [Ve... 306 3e-81 ref|ZP_06290894.1| DNA-damage-inducible protein D [Peptoniphilus... 305 6e-81 ref|ZP_06342185.1| DNA-damage-inducible protein D family protein... 305 7e-81 ref|ZP_02233204.1| hypothetical protein DORFOR_00036 [Dorea form... 304 9e-81 ref|ZP_06758308.1| DNA-damage-inducible protein D [Veillonella s... 304 1e-80 ref|YP_519165.1| DNA-damage-inducible protein D [Desulfitobacter... 301 8e-80 ref|ZP_04729317.1| DNA-damage-inducible protein D [Neisseria gon... 287 1e-75 ref|ZP_01828051.1| DNA-damage-inducible protein [Streptococcus p... 283 2e-74 gb|EBG28596.1| hypothetical protein GOS_9458616 [marine metagenome] 281 1e-73 ref|ZP_08051753.1| DNA-damage-inducible protein D [Streptococcus... 279 3e-73 ref|ZP_02207310.1| hypothetical protein COPEUT_02120 [Coprococcu... 278 8e-73 ref|ZP_06757733.1| DNA-damage-inducible protein D [Veillonella s... 277 2e-72 ref|YP_003878207.1| DNA-damage-inducible protein D [Streptococcu... 274 1e-71 ref|ZP_08084347.1| integrase [Prevotella oralis ATCC 33269] >gb|... 273 2e-71 ref|YP_004246315.1| DNA-damage-inducible protein [Spirochaeta sp... 270 2e-70 gb|EBM11548.1| hypothetical protein GOS_8460688 [marine metagenome] 259 2e-67 emb|CBK82707.1| hypothetical protein [Coprococcus sp. ART55/1] 250 2e-64 gb|EBO60712.1| hypothetical protein GOS_8051923 [marine metagenome] 249 2e-64 ref|ZP_07153957.1| conserved hypothetical protein [Escherichia c... 234 9e-60 gb|EFZ46682.1| DNA-damage-inducible protein D [Escherichia coli ... 233 2e-59 ref|ZP_05974406.2| DNA-damage-inducible protein D [Providencia r... 231 1e-58 ref|YP_112573.1| DNA-damage-inducible protein D [Methylococcus c... 223 3e-56 gb|EBG73089.1| hypothetical protein GOS_9383852 [marine metagenome] 204 1e-50 ref|ZP_05629838.1| DNA-damage-inducible protein D [Actinobacillu... 186 4e-45 gb|EGB35802.1| dinD protein [Escherichia coli E482] 181 1e-43 ref|ZP_08185680.1| hypothetical protein XGA_4740 [Xanthomonas ga... 176 3e-42 ref|NP_638251.1| DNA-damage-inducible protein d [Xanthomonas cam... 175 5e-42 gb|EBS71547.1| hypothetical protein GOS_7392226 [marine metagenome] 174 1e-41 ref|YP_001902656.1| putative DNA-related protein [Xanthomonas ca... 172 8e-41 ref|ZP_04840978.1| DNA-damage-inducible protein D [Bacteroides s... 167 2e-39 emb|CBK68626.1| hypothetical protein [Bacteroides xylanisolvens ... 167 2e-39 emb|CBW21722.1| putative DNA-damage-inducible protein d [Bactero... 167 2e-39 ref|ZP_06089132.1| DNA-damage-inducible protein D [Bacteroides s... 165 7e-39 ref|ZP_06268822.1| DNA-damage-inducible protein D family protein... 162 6e-38 ref|YP_379822.1| DNA-damage-inducible protein D [Chlorobium chlo... 161 1e-37 ref|ZP_08171245.1| DNA-damage-inducible protein D family protein... 161 1e-37 ref|YP_003808488.1| DNA-damage-inducible protein D [Desulfarculu... 160 2e-37 ref|ZP_02419265.1| hypothetical protein ANACAC_01851 [Anaerostip... 160 2e-37 ref|YP_003756022.1| DNA-damage-inducible protein D [Hyphomicrobi... 160 2e-37 ref|ZP_05349036.3| DNA-damage-inducible protein D [Bryantella fo... 160 2e-37 ref|ZP_07782200.1| DNA-damage-inducible D domain protein [Escher... 160 3e-37 ref|ZP_07932939.1| hypothetical protein HMPREF1011_03290 [Anaero... 160 3e-37 ref|ZP_01287964.1| DNA-damage-inducible protein D [delta proteob... 159 3e-37 emb|CBL34274.1| hypothetical protein ES1_12750 [Eubacterium sira... 159 7e-37 ref|ZP_08320067.1| DNA-damage-inducible protein D family protein... 158 9e-37 ref|ZP_07739237.1| DNA-damage-inducible protein D [Aminomonas pa... 158 1e-36 ref|ZP_08488352.1| DNA-damage-inducible protein D [Acidithiobaci... 158 1e-36 ref|ZP_07153958.1| hypothetical protein HMPREF9530_04098 [Escher... 157 1e-36 ref|YP_002936213.1| hypothetical protein EUBREC_0275 [Eubacteriu... 155 4e-36 gb|EFZ46681.1| DNA-damage-inducible protein D domain protein [Es... 155 6e-36 ref|YP_002741557.1| putative DNA damage inducible protein [Strep... 155 6e-36 ref|ZP_05853240.1| DNA-damage-inducible protein D [Blautia hanse... 155 6e-36 ref|ZP_05347674.3| DNA-damage-inducible protein D [Bryantella fo... 155 7e-36 ref|ZP_06963137.1| putative DNA damage inducible protein [Strept... 155 8e-36 ref|YP_912153.1| DNA-damage-inducible protein D [Chlorobium phae... 154 1e-35 gb|EGF42121.1| DNA-damage-inducible protein D [Vibrio parahaemol... 154 1e-35 ref|ZP_08330971.1| hypothetical protein IMCC1989_2286 [gamma pro... 154 2e-35 ref|ZP_06253312.1| DNA-damage-inducible protein D [Prevotella co... 153 3e-35 ref|YP_864066.1| DNA-damage-inducible protein D [Magnetococcus s... 152 4e-35 ref|YP_003006513.1| DNA-damage-inducible protein D [Dickeya zeae... 152 6e-35 ref|ZP_05844684.1| DNA-damage-inducible protein D [Rhodobacter s... 152 6e-35 ref|ZP_03391228.1| DNA-damage-inducible protein D [Capnocytophag... 151 1e-34 ref|ZP_06422974.1| DNA-damage-inducible protein D [Prevotella sp... 151 1e-34 ref|ZP_08616419.1| hypothetical protein HMPREF0988_02004 [Lachno... 151 1e-34 gb|AEA82216.1| DNA-damage-inducible protein D [Pseudomonas stutz... 151 1e-34 ref|ZP_02926058.1| DNA-damage-inducible protein D [Verrucomicrob... 150 1e-34 ref|ZP_08446408.1| DNA-damage-inducible protein D family protein... 150 2e-34 gb|EBG33904.1| hypothetical protein GOS_9449615 [marine metagenome] 150 2e-34 ref|ZP_01982350.1| DNA-damage-inducible protein D [Vibrio choler... 150 2e-34 ref|ZP_01913584.1| DNA-damage-inducible protein D [Limnobacter s... 150 3e-34 ref|ZP_01081014.1| DNA-damage-inducible protein D [Synechococcus... 150 3e-34 ref|ZP_02426535.1| hypothetical protein ALIPUT_02702 [Alistipes ... 149 3e-34 emb|CBX27280.1| hypothetical protein N47_I07000 [uncultured Desu... 149 6e-34 ref|YP_984527.1| DNA-damage-inducible protein D [Acidovorax sp. ... 149 7e-34 ref|ZP_05850817.1| DNA-damage-inducible protein d [Haemophilus i... 149 7e-34 ref|YP_004447880.1| DNA-damage-inducible protein D [Haliscomenob... 148 8e-34 ref|ZP_03799005.1| hypothetical protein COPCOM_01262 [Coprococcu... 148 8e-34 emb|CBK63481.1| hypothetical protein AL1_09400 [Alistipes shahii... 148 1e-33 ref|ZP_06254376.1| DNA-damage-inducible protein D [Prevotella or... 147 1e-33 ref|ZP_07322856.1| DNA-damage-inducible protein D [Prevotella di... 147 2e-33 ref|ZP_07962412.1| DNA-damage-inducible protein D [Prevotella sa... 147 2e-33 ref|ZP_01772616.1| Hypothetical protein COLAER_01626 [Collinsell... 147 2e-33 ref|YP_001249547.1| DNA-damage-inducible protein D [Legionella p... 147 3e-33 ref|ZP_06725400.1| DNA-damage-inducible protein D family protein... 147 3e-33 ref|ZP_05285242.1| DNA-damage-inducible protein D [Bacteroides s... 146 3e-33 ref|ZP_07867012.1| DNA-damage-inducible protein D [Capnocytophag... 146 4e-33 ref|YP_003141075.1| DNA-damage-inducible protein D [Capnocytopha... 145 8e-33 ref|ZP_07217720.1| DNA-damage-inducible protein D [Bacteroides s... 144 1e-32 ref|ZP_05543836.1| DNA-damage-inducible protein D [Parabacteroid... 143 3e-32 ref|ZP_06241554.1| DNA-damage-inducible protein D [Victivallis v... 142 5e-32 emb|CBL04567.1| hypothetical protein [Gordonibacter pamelaeae 7-... 141 9e-32 ref|YP_001944467.1| DNA-damage-inducible protein D [Chlorobium l... 140 1e-31 ref|ZP_06076245.1| DNA-damage-inducible protein D [Bacteroides s... 140 2e-31 gb|EFK97322.1| DNA-damage-inducible protein D [sediment metagenome] 140 2e-31 ref|YP_003304538.1| DNA-damage-inducible protein [Sulfurospirill... 140 2e-31 gb|ADZ11379.1| DNA-damage-inducible protein D [Riemerella anatip... 139 3e-31 ref|YP_004046615.1| DNA-damage-inducible protein [Riemerella ana... 139 3e-31 ref|YP_003848372.1| DNA-damage-inducible protein D [Gallionella ... 138 9e-31 ref|YP_003249297.1| DNA-damage-inducible protein D [Fibrobacter ... 138 1e-30 ref|ZP_03047563.1| DNA-damage-inducible protein D [Escherichia c... 137 2e-30 ref|YP_001295180.1| DNA-damage-inducible protein D [Flavobacteri... 137 2e-30 ref|ZP_08135432.1| DNA-damage-inducible protein D [Prevotella mu... 136 3e-30 ref|YP_383048.1| DNA-damage-inducible protein D [Geobacter metal... 135 5e-30 ref|YP_379426.1| hypothetical protein Cag_1121 [Chlorobium chlor... 134 2e-29 ref|ZP_04547601.1| DNA-damage-inducible protein D [Bacteroides s... 130 3e-28 ref|ZP_08446631.1| DNA-damage-inducible protein D family protein... 127 3e-27 ref|ZP_03726035.1| DNA-damage-inducible protein [Opitutaceae bac... 126 3e-27 ref|ZP_08171239.1| DNA-damage-inducible protein D family protein... 125 8e-27 ref|ZP_07269840.1| DNA-damage-inducible protein D [Streptomyces ... 119 5e-25 ref|ZP_06826956.1| DNA-damage-inducible protein D [Streptomyces ... 119 6e-25 ref|ZP_04539593.1| DNA-damage-inducible protein D [Bacteroides s... 119 6e-25 ref|ZP_06201199.1| conserved hypothetical protein [Bacteroides s... 118 9e-25 ref|ZP_02069650.1| hypothetical protein BACUNI_01064 [Bacteroide... 118 1e-24 ref|ZP_01791795.1| DNA-damage-inducible protein d [Haemophilus i... 118 1e-24 ref|ZP_04554886.1| DNA-damage-inducible protein D [Bacteroides s... 117 2e-24 ref|ZP_03300702.1| hypothetical protein BACDOR_02071 [Bacteroide... 116 3e-24 ref|ZP_04578339.1| DNA-damage-inducible protein D [Oxalobacter f... 114 1e-23 ref|YP_004221595.1| DNA-damage-inducible protein [Bifidobacteriu... 114 1e-23 ref|NP_695378.1| DNA-damage-inducible protein [Bifidobacterium l... 114 2e-23 ref|YP_001304347.1| hypothetical protein BDI_3017 [Parabacteroid... 114 2e-23 ref|ZP_07977352.1| DNA-damage-inducible protein D [Streptomyces ... 112 5e-23 ref|XP_002959994.1| hypothetical protein VOLCADRAFT_101508 [Volv... 110 2e-22 ref|YP_001784207.1| hypothetical protein HSM_0875 [Haemophilus s... 110 2e-22 ref|ZP_08330970.1| DNA-damage-inducible protein D [gamma proteob... 110 3e-22 ref|ZP_07322979.1| conserved hypothetical protein [Prevotella di... 110 3e-22 gb|EGF42122.1| DNA-damage-inducible protein D [Vibrio parahaemol... 108 7e-22 ref|ZP_05974407.1| DNA-damage-inducible protein D [Providencia r... 107 2e-21 ref|YP_002017820.1| DNA-damage-inducible protein D [Pelodictyon ... 105 1e-20 ref|YP_004162276.1| hypothetical protein Bache_2746 [Bacteroides... 102 6e-20 ref|YP_001298532.1| DNA-damage-inducible protein D [Bacteroides ... 102 7e-20 ref|ZP_06287490.1| conserved domain protein [Prevotella buccalis... 102 8e-20 ref|NP_490241.1| DNA-damage-inducible protein [Nostoc sp. PCC 71... 97.4 2e-18 ref|ZP_08154029.1| DNA-damage-inducible protein D [Rhodococcus e... 94.4 2e-17 ref|ZP_08276471.1| DNA-damage-inducible protein D [Oxalobacterac... 92.0 8e-17 ref|ZP_06088205.1| DNA-damage-inducible protein D [Bacteroides s... 90.1 3e-16 ref|YP_004329468.1| hypothetical protein HMPREF9137_1796 [Prevot... 89.7 5e-16 emb|CBK67207.1| hypothetical protein [Bacteroides xylanisolvens ... 89.0 7e-16 ref|ZP_03477839.1| hypothetical protein PRABACTJOHN_03529 [Parab... 88.2 1e-15 ref|YP_002906904.1| hypothetical protein ckrop_1634 [Corynebacte... 85.9 6e-15 ref|ZP_06975034.1| DNA-damage-inducible protein D [Ktedonobacter... 85.1 1e-14 ref|NP_817387.1| gp49 [Mycobacterium phage Che8] >gb|AAN12447.1|... 84.0 2e-14 ref|ZP_03679401.1| hypothetical protein BACCELL_03758 [Bacteroid... 84.0 2e-14 ref|ZP_03016394.1| hypothetical protein BACINT_03999 [Bacteroide... 84.0 3e-14 ref|ZP_04847095.1| conserved hypothetical protein [Bacteroides s... 82.8 6e-14 ref|YP_171480.1| DNA-damage-inducible protein [Synechococcus elo... 82.4 8e-14 emb|CBW21698.1| conserved hypothetical protein [Bacteroides frag... 80.9 2e-13 ref|ZP_03016346.1| hypothetical protein BACINT_03951 [Bacteroide... 80.9 2e-13 ref|ZP_06655747.1| predicted protein [Escherichia coli B354] >gb... 79.3 5e-13 ref|YP_655040.1| gp44 [Mycobacterium phage Llij] >gb|ABD58260.1|... 79.3 5e-13 ref|YP_001300919.1| hypothetical protein BVU_3686 [Bacteroides v... 78.2 1e-12 ref|NP_813450.1| hypothetical protein BT_4539 [Bacteroides theta... 78.2 1e-12 ref|ZP_08300964.1| toxin-antitoxin system, toxin component, Fic ... 78.2 2e-12 ref|NP_779271.1| DNA-damage-inducible protein D [Xylella fastidi... 77.8 2e-12 emb|CBK64674.1| Virulence protein [Alistipes shahii WAL 8301] 75.5 8e-12 emb|CBX29043.1| hypothetical protein N47_J00240 [uncultured Desu... 75.1 1e-11 ref|ZP_06993859.1| toxin-antitoxin system, toxin component, Fic ... 74.7 2e-11 ref|YP_003830228.1| hypothetical protein bpr_I0904 [Butyrivibrio... 74.7 2e-11 ref|ZP_08031351.1| hypothetical protein HMPREF9555_01439 [Seleno... 74.7 2e-11 ref|ZP_06091999.1| conserved hypothetical protein [Bacteroides s... 71.6 1e-10 gb|EFZ68076.1| DNA-damage-inducible protein D domain protein [Es... 66.6 4e-09 ref|ZP_08234929.1| hypothetical protein SACT1_1478 [Streptomyces... 66.2 5e-09 ref|ZP_07839958.1| hypothetical protein EubceDRAFT_2673 [Eubacte... 65.1 1e-08 ref|YP_001228950.1| hypothetical protein Gura_0161 [Geobacter ur... 63.5 3e-08 ref|ZP_05253691.1| conserved hypothetical protein [Bacteroides s... 61.6 1e-07 ref|ZP_05427401.1| DNA-damage-inducible protein D [Eubacterium s... 60.1 4e-07 ref|ZP_01290908.1| hypothetical protein MldDRAFT_3377 [delta pro... 59.7 4e-07 ref|ZP_00651672.1| hypothetical protein XfasaDRAFT_1076 [Xylella... 58.5 1e-06 ref|ZP_06405914.1| DNA-damage-inducible protein D [Prevotella sp... 56.6 4e-06 ref|ZP_08031352.1| conserved domain protein [Selenomonas artemid... 52.4 7e-05 ref|ZP_07059873.1| DNA-damage-inducible protein D [Prevotella br... 50.4 3e-04 ref|ZP_00651826.1| hypothetical protein XfasaDRAFT_1230 [Xylella... 48.5 0.001 ref|ZP_08444814.1| hypothetical protein HMPREF9074_00540 [Capnoc... 48.1 0.001 ref|ZP_08305191.1| hypothetical protein HMPREF9538_02874 [Klebsi... 47.4 0.003 ref|ZP_06298894.1| hypothetical protein pah_c016o089 [Parachlamy... 46.6 0.004 emb|CBA75578.1| DNA-damage-inducible protein [Arsenophonus nason... 45.1 0.011 ref|ZP_07939782.1| hypothetical protein HMPREF1007_02899 [Bacter... 43.1 0.052 >ref|AP_004147.1| DNA-damage-inducible protein [Escherichia coli str. K-12 substr. W3110] ref|NP_418102.2| DNA-damage-inducible protein [Escherichia coli str. K-12 substr. MG1655] ref|YP_001732472.1| DNA-damage-inducible protein [Escherichia coli str. K-12 substr. DH10B] 9 more sequence titles Length=274 Score = 569 bits (1466), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 274/274 (100%), Positives = 274/274 (100%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >gb|AAA61998.1| o278 [Escherichia coli] gb|ADI22280.1| hypothetical protein [uncultured Gemmatimonadales bacterium HF0200_36I24] Length=278 Score = 568 bits (1465), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 274/274 (100%), Positives = 274/274 (100%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct 5 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct 125 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 185 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|ZP_07163973.1| putative DNA-damage-inducible protein D [Escherichia coli MS 116-1] ref|ZP_07167745.1| putative DNA-damage-inducible protein D [Escherichia coli MS 175-1] ref|ZP_07244314.1| putative DNA-damage-inducible protein D [Escherichia coli MS 146-1] 7 more sequence titles Length=278 Score = 564 bits (1454), Expect = 5e-159, Method: Compositional matrix adjust. Identities = 272/274 (99%), Positives = 272/274 (99%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct 5 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct 125 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KV Sbjct 185 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVM 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|ZP_05439489.1| DNA-damage-inducible protein D [Escherichia sp. 4_1_40B] ref|ZP_07191670.1| putative DNA-damage-inducible protein D [Escherichia coli MS 196-1] ref|ZP_07499700.1| DNA-damage-inducible protein D [Escherichia coli H736] gb|EFI86746.1| putative DNA-damage-inducible protein D [Escherichia coli MS 196-1] gb|EFU99237.1| DNA-damage-inducible protein D [Escherichia coli 3431] Length=274 Score = 564 bits (1453), Expect = 6e-159, Method: Compositional matrix adjust. Identities = 272/274 (99%), Positives = 272/274 (99%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KV Sbjct 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVM 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >gb|AEE58968.1| DNA-damage-inducible protein [Escherichia coli UMNK88] Length=274 Score = 561 bits (1447), Expect = 3e-158, Method: Compositional matrix adjust. Identities = 271/274 (98%), Positives = 271/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGYQGLYGGLDQK Sbjct 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KV Sbjct 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVM 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >gb|EGB31192.1| dinD protein [Escherichia coli E1520] Length=274 Score = 560 bits (1444), Expect = 6e-158, Method: Compositional matrix adjust. Identities = 271/274 (98%), Positives = 271/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYG LDQK Sbjct 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGRLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KV Sbjct 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVM 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >gb|EGK15757.1| DNA-damage-inducible protein D [Shigella flexneri VA-6] gb|EGM59257.1| DNA-damage-inducible protein [Shigella flexneri J1713] Length=274 Score = 558 bits (1439), Expect = 2e-157, Method: Compositional matrix adjust. Identities = 269/274 (98%), Positives = 270/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYF IQTRRQELAD Sbjct 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFTIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQ KGLKK+QKILDHMGSTELAANLFRATQTEEKLKRD VNSKQQANTTHFDVG KVR Sbjct 181 AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDSVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >ref|YP_691198.1| DNA-damage-inducible protein D [Shigella flexneri 5 str. 8401] gb|ABF05893.1| DNA-damage-inducible protein [Shigella flexneri 5 str. 8401] Length=278 Score = 558 bits (1439), Expect = 3e-157, Method: Compositional matrix adjust. Identities = 269/274 (98%), Positives = 270/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct 5 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYF IQTRRQELAD Sbjct 65 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFTIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct 125 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQ KGLKK+QKILDHMGSTELAANLFRATQTEEKLKRD VNSKQQANTTHFDVG KVR Sbjct 185 AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDSVNSKQQANTTHFDVGSKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|ZP_07183197.1| putative DNA-damage-inducible protein D [Escherichia coli MS 69-1] gb|EFJ83006.1| putative DNA-damage-inducible protein D [Escherichia coli MS 69-1] Length=278 Score = 557 bits (1436), Expect = 6e-157, Method: Compositional matrix adjust. Identities = 268/274 (97%), Positives = 271/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEAC NSGHTIDDH Sbjct 5 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACLNSGHTIDDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 185 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|ZP_08366171.1| DNA-damage-inducible protein D [Escherichia coli TA143] gb|EGI29766.1| DNA-damage-inducible protein D [Escherichia coli TA143] Length=274 Score = 557 bits (1435), Expect = 8e-157, Method: Compositional matrix adjust. Identities = 268/274 (97%), Positives = 271/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEAC NSGHTIDDH Sbjct 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACLNSGHTIDDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 181 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >ref|NP_709424.1| DNA-damage-inducible protein D [Shigella flexneri 2a str. 301] ref|NP_839250.1| DNA-damage-inducible protein D [Shigella flexneri 2a str. 2457T] gb|AAN45131.1| DNA-damage-inducible protein [Shigella flexneri 2a str. 301] 8 more sequence titles Length=274 Score = 556 bits (1434), Expect = 1e-156, Method: Compositional matrix adjust. Identities = 268/274 (97%), Positives = 270/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYF IQTRRQELAD Sbjct 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFTIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQ KGLKK+QKILDHMGSTELAANLFRATQTEEKLKRD VNSKQQANTTHFDVG KVR Sbjct 181 AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDSVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGT+PEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTIPEELPTPQVSIKQLENSVKITEKK 274 >gb|ADA75992.1| DNA-damage-inducible protein [Shigella flexneri 2002017] Length=278 Score = 556 bits (1433), Expect = 1e-156, Method: Compositional matrix adjust. Identities = 268/274 (97%), Positives = 270/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct 5 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYF IQTRRQELAD Sbjct 65 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFTIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct 125 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQ KGLKK+QKILDHMGSTELAANLFRATQTEEKLKRD VNSKQQANTTHFDVG KVR Sbjct 185 AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDSVNSKQQANTTHFDVGSKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGT+PEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTIPEELPTPQVSIKQLENSVKITEKK 278 >ref|YP_002331371.1| DNA-damage-inducible protein D [Escherichia coli O127:H6 str. E2348/69] emb|CAS11457.1| DNA-damage-inducible protein [Escherichia coli O127:H6 str. E2348/69] Length=274 Score = 556 bits (1433), Expect = 1e-156, Method: Compositional matrix adjust. Identities = 267/274 (97%), Positives = 272/274 (99%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEAC NSGHTIDDH Sbjct 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACLNSGHTIDDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDM+KIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FEEILDMIKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 181 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQV+IKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVNIKQLENSVKITEKK 274 >gb|EFZ58882.1| DNA-damage-inducible protein D [Escherichia coli LT-68] Length=274 Score = 555 bits (1430), Expect = 3e-156, Method: Compositional matrix adjust. Identities = 268/274 (97%), Positives = 270/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEAC NSGHTIDDH Sbjct 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACLNSGHTIDDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQ KGLKK+QKI DHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 181 AIHQLKGLKKSQKIQDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >emb|CBG36804.1| dna-damage-inducible protein D [Escherichia coli 042] Length=278 Score = 555 bits (1429), Expect = 4e-156, Method: Compositional matrix adjust. Identities = 267/274 (97%), Positives = 270/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEAC NSGHTIDDH Sbjct 5 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACLNSGHTIDDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGS ELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 185 AIHQRKGLKKSQKILDHMGSIELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|YP_002414798.1| DNA-damage-inducible protein D [Escherichia coli UMN026] emb|CAR15301.1| DNA-damage-inducible protein [Escherichia coli UMN026] Length=274 Score = 555 bits (1429), Expect = 4e-156, Method: Compositional matrix adjust. Identities = 267/274 (97%), Positives = 270/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEAC NSGHTIDDH Sbjct 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACLNSGHTIDDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 181 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPT QVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTSQVSIKQLENSVKITEKK 274 >gb|EGK17370.1| DNA-damage-inducible protein D [Shigella flexneri K-272] gb|EGK32666.1| DNA-damage-inducible protein D [Shigella flexneri K-227] Length=274 Score = 554 bits (1427), Expect = 6e-156, Method: Compositional matrix adjust. Identities = 268/274 (97%), Positives = 269/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEA ENSGHTIDDH Sbjct 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEAYENSGHTIDDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYF IQTRRQELAD Sbjct 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFTIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQ KGLKK+QKILDHMGSTELAANLFRATQTEEKLKRD VNSKQQANTTHFDVG KVR Sbjct 181 AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDSVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >ref|ZP_06651192.1| dinD [Escherichia coli FVEC1412] ref|ZP_06992609.1| DNA-damage-inducible protein D [Escherichia coli FVEC1302] ref|ZP_07116910.1| putative DNA-damage-inducible protein D [Escherichia coli MS 198-1] gb|EFE99113.1| dinD [Escherichia coli FVEC1412] gb|EFI18368.1| DNA-damage-inducible protein D [Escherichia coli FVEC1302] gb|EFJ73613.1| putative DNA-damage-inducible protein D [Escherichia coli MS 198-1] Length=278 Score = 554 bits (1427), Expect = 6e-156, Method: Compositional matrix adjust. Identities = 267/274 (97%), Positives = 270/274 (98%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEAC NSGHTIDDH Sbjct 5 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACLNSGHTIDDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 185 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPT QVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTSQVSIKQLENSVKITEKK 278 >ref|ZP_07136262.1| putative DNA-damage-inducible protein D [Escherichia coli MS 115-1] gb|EFJ96450.1| putative DNA-damage-inducible protein D [Escherichia coli MS 115-1] Length=278 Score = 477 bits (1228), Expect = 7e-133, Method: Compositional matrix adjust. Identities = 232/274 (84%), Positives = 244/274 (89%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 185 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|YP_859240.1| DNA-damage-inducible protein D [Escherichia coli APEC O1] ref|YP_002393630.1| DNA-damage-inducible protein D [Escherichia coli S88] ref|ZP_04001640.1| DNA-damage-inducible protein D [Escherichia coli 83972] 18 more sequence titles Length=278 Score = 476 bits (1224), Expect = 2e-132, Method: Compositional matrix adjust. Identities = 231/274 (84%), Positives = 244/274 (89%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 185 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|YP_671616.1| DNA-damage-inducible protein D [Escherichia coli 536] ref|NP_756331.2| DNA-damage-inducible protein D [Escherichia coli CFT073] ref|YP_543148.2| DNA-damage-inducible protein D [Escherichia coli UTI89] 13 more sequence titles Length=274 Score = 475 bits (1223), Expect = 3e-132, Method: Compositional matrix adjust. Identities = 231/274 (84%), Positives = 244/274 (89%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 181 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >ref|YP_001745945.1| DNA-damage-inducible protein D [Escherichia coli SMS-3-5] gb|ACB16231.1| DNA-damage-inducible protein D [Escherichia coli SMS-3-5] Length=274 Score = 475 bits (1223), Expect = 3e-132, Method: Compositional matrix adjust. Identities = 231/274 (84%), Positives = 244/274 (89%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 181 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >gb|ABB68206.1| DNA-damage-inducible protein [Shigella boydii Sb227] Length=278 Score = 475 bits (1222), Expect = 3e-132, Method: Compositional matrix adjust. Identities = 231/274 (84%), Positives = 243/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQ ILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 185 AIHQRKGLKKNQNILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|ZP_07095340.1| putative DNA-damage-inducible protein D [Escherichia coli MS 107-1] gb|EFK53069.1| putative DNA-damage-inducible protein D [Escherichia coli MS 107-1] gb|EGB88902.1| putative DNA-damage-inducible protein D [Escherichia coli MS 117-3] Length=278 Score = 475 bits (1222), Expect = 4e-132, Method: Compositional matrix adjust. Identities = 232/274 (84%), Positives = 243/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct 125 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQ KGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 185 AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|ZP_03051328.1| DNA-damage-inducible protein D [Escherichia coli E110019] ref|YP_002295201.1| DNA-damage-inducible protein D [Escherichia coli SE11] gb|EDV86786.1| DNA-damage-inducible protein D [Escherichia coli E110019] dbj|BAG79450.1| DNA-damage-inducible protein [Escherichia coli SE11] gb|EGC09942.1| DNA-damage-inducible protein [Escherichia coli E1167] Length=274 Score = 475 bits (1222), Expect = 4e-132, Method: Compositional matrix adjust. Identities = 232/274 (84%), Positives = 243/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQ KGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 181 AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >ref|YP_410034.2| DNA-damage-inducible protein D [Shigella boydii Sb227] ref|YP_001882359.1| DNA-damage-inducible protein D [Shigella boydii CDC 3083-94] gb|ACD07824.1| DNA-damage-inducible protein D [Shigella boydii CDC 3083-94] gb|EFW52344.1| DNA-damage-inducible protein D [Shigella dysenteriae CDC 74-1112] gb|EFW60451.1| DNA-damage-inducible protein D [Shigella flexneri CDC 796-83] gb|EGI94444.1| DNA-damage-inducible protein D [Shigella boydii 3594-74] Length=274 Score = 474 bits (1221), Expect = 4e-132, Method: Compositional matrix adjust. Identities = 231/274 (84%), Positives = 243/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQ ILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 181 AIHQRKGLKKNQNILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >ref|YP_002410043.1| DNA-damage-inducible protein D [Escherichia coli IAI39] emb|CAR20274.1| DNA-damage-inducible protein [Escherichia coli IAI39] Length=278 Score = 474 bits (1220), Expect = 6e-132, Method: Compositional matrix adjust. Identities = 230/274 (83%), Positives = 244/274 (89%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRL+LRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLYLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 185 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|YP_002405033.1| DNA-damage-inducible protein D [Escherichia coli 55989] ref|ZP_07102555.1| putative DNA-damage-inducible protein D [Escherichia coli MS 119-7] ref|ZP_07139496.1| putative DNA-damage-inducible protein D [Escherichia coli MS 182-1] 9 more sequence titles Length=278 Score = 473 bits (1218), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 230/274 (83%), Positives = 243/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 185 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|YP_001465126.1| DNA-damage-inducible protein D [Escherichia coli E24377A] ref|ZP_03029603.1| DNA-damage-inducible protein D [Escherichia coli B7A] ref|ZP_05435216.1| DNA-damage-inducible protein D [Shigella sp. D9] 17 more sequence titles Length=274 Score = 473 bits (1217), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 230/274 (83%), Positives = 243/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 181 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >gb|EGI90009.1| DNA-damage-inducible protein D [Shigella boydii 5216-82] Length=274 Score = 473 bits (1217), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 230/274 (83%), Positives = 242/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSI QLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSINQLENSVKITEKK 274 >gb|ABB63994.1| DNA-damage-inducible protein [Shigella dysenteriae Sd197] Length=278 Score = 473 bits (1216), Expect = 2e-131, Method: Compositional matrix adjust. Identities = 229/274 (83%), Positives = 243/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 185 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQ+SIKQLEN VKITEKK Sbjct 245 QTIQELGGTMPEELPTPQISIKQLENCVKITEKK 278 >ref|YP_405485.2| DNA-damage-inducible protein D [Shigella dysenteriae Sd197] ref|ZP_07679015.1| DNA-damage-inducible protein D [Shigella dysenteriae 1617] gb|EFP73351.1| DNA-damage-inducible protein D [Shigella dysenteriae 1617] Length=274 Score = 472 bits (1215), Expect = 2e-131, Method: Compositional matrix adjust. Identities = 229/274 (83%), Positives = 243/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 181 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQ+SIKQLEN VKITEKK Sbjct 241 QTIQELGGTMPEELPTPQISIKQLENCVKITEKK 274 >ref|ZP_07692001.1| putative DNA-damage-inducible protein D [Escherichia coli MS 145-7] gb|EFO56062.1| putative DNA-damage-inducible protein D [Escherichia coli MS 145-7] Length=278 Score = 471 bits (1213), Expect = 4e-131, Method: Compositional matrix adjust. Identities = 229/274 (83%), Positives = 243/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIH+RKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 185 AIHKRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >gb|AAZ90305.1| DNA-damage-inducible protein [Shigella sonnei Ss046] Length=278 Score = 471 bits (1213), Expect = 5e-131, Method: Compositional matrix adjust. Identities = 229/274 (83%), Positives = 242/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 185 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSI QLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSINQLENSVKITEKK 278 >ref|YP_312540.2| DNA-damage-inducible protein D [Shigella sonnei Ss046] gb|EFZ52608.1| DNA-damage-inducible protein D [Shigella sonnei 53G] Length=274 Score = 471 bits (1212), Expect = 6e-131, Method: Compositional matrix adjust. Identities = 229/274 (83%), Positives = 242/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 181 AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSI QLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSINQLENSVKITEKK 274 >ref|ZP_06659733.1| dinD [Escherichia coli B185] gb|EFF04130.1| dinD [Escherichia coli B185] Length=274 Score = 471 bits (1211), Expect = 8e-131, Method: Compositional matrix adjust. Identities = 228/274 (83%), Positives = 243/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+QKILD+MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 181 AIHQRKGLKKSQKILDYMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQ+SIKQLEN VKITEKK Sbjct 241 QTIQELGGTMPEELPTPQISIKQLENCVKITEKK 274 >ref|ZP_03063629.1| DNA-damage-inducible protein D [Shigella dysenteriae 1012] gb|EDX36867.1| DNA-damage-inducible protein D [Shigella dysenteriae 1012] gb|EFW54924.1| DNA-damage-inducible protein D [Shigella boydii ATCC 9905] gb|EGI89686.1| DNA-damage-inducible protein D [Shigella dysenteriae 155-74] Length=274 Score = 469 bits (1208), Expect = 2e-130, Method: Compositional matrix adjust. Identities = 229/274 (83%), Positives = 241/274 (87%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEEL TPQVSI QLENSVKITEKK Sbjct 241 QTIQELGGTMPEELQTPQVSINQLENSVKITEKK 274 >ref|ZP_04640583.1| DNA-damage-inducible protein D [Yersinia mollaretii ATCC 43969] gb|EEQ10938.1| DNA-damage-inducible protein D [Yersinia mollaretii ATCC 43969] Length=276 Score = 466 bits (1199), Expect = 2e-129, Method: Compositional matrix adjust. Identities = 220/274 (80%), Positives = 239/274 (87%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQP EEIK ++A+G E WSAR L K L YSEYRHF PV+ +AKEAC SGH I+DH Sbjct 1 MNEHHQPIEEIKQLDADGIEYWSARDLAKTLDYSEYRHFTPVIDKAKEACSKSGHNIEDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FE++LDMVKIGS A R LKDI LSRYACYL VQNGDP KPVIAAGQTYFA+QTRRQELAD Sbjct 61 FEDVLDMVKIGSGASRKLKDIKLSRYACYLTVQNGDPTKPVIAAGQTYFAMQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DE FK+LREDEKRLFLRNELKEHNKQLVE AQQAGV T DFAIFQNHGYQGLYGGLDQK Sbjct 121 DETFKRLREDEKRLFLRNELKEHNKQLVEVAQQAGVETHLDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+Q+ILDHMGSTELAANLFRATQ EEKL+RD +NSKQQAN THFDVG+KVR Sbjct 181 AIHQRKGLKKSQRILDHMGSTELAANLFRATQAEEKLRRDQINSKQQANQTHFDVGKKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTI+ELGGTMPE LP P+ SIKQ+E + K KK Sbjct 241 QTIEELGGTMPENLPIPEQSIKQIETATKKLSKK 274 >ref|YP_003470243.1| DNA-damage-inducible protein, part of SOS response [Xenorhabdus bovienii SS-2004] emb|CBJ83485.1| DNA-damage-inducible protein, part of SOS response [Xenorhabdus bovienii SS-2004] Length=274 Score = 461 bits (1187), Expect = 4e-128, Method: Compositional matrix adjust. Identities = 220/274 (80%), Positives = 241/274 (87%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 M +HHQPFE+IK I+ +G E WSAR+L KLL YSEYRHF PVL RAKEAC +SGH I++H Sbjct 1 MEQHHQPFEKIKRIDESGIEFWSARELSKLLEYSEYRHFTPVLERAKEACSHSGHNIENH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FE++LDMV IGS A+R LKDI+LSRYACYLVVQNGDP+KPVIAAGQTYFAIQTRRQELAD Sbjct 61 FEDVLDMVNIGSGAQRKLKDIILSRYACYLVVQNGDPSKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 D FK+LREDEKRLFLRNELKEHNKQLVE AQ+AGV T DFAIFQNHGYQGLYGGLDQK Sbjct 121 DATFKRLREDEKRLFLRNELKEHNKQLVETAQRAGVETNIDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKK+Q+ILDHMGSTELAANLFRATQ EEKL+RD V SK QAN THFDVGRKVR Sbjct 181 AIHQRKGLKKSQRILDHMGSTELAANLFRATQAEEKLRRDNVKSKTQANQTHFDVGRKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 TIQELGGTMPE+LP+P+ SIKQLE K KK Sbjct 241 DTIQELGGTMPEDLPSPEKSIKQLETIAKKKLKK 274 >ref|ZP_04872898.1| DNA-damage-inducible protein D [Escherichia sp. 1_1_43] ref|YP_003046681.1| DNA-damage-inducible protein D [Escherichia coli B str. REL606] gb|EEH70838.1| DNA-damage-inducible protein D [Escherichia sp. 1_1_43] gb|ACT41145.1| DNA-damage-inducible protein [Escherichia coli B str. REL606] gb|ACT45300.1| DNA-damage-inducible protein [Escherichia coli BL21(DE3)] Length=278 Score = 455 bits (1171), Expect = 3e-126, Method: Compositional matrix adjust. Identities = 231/274 (84%), Positives = 243/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAG ATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGGATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 185 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|YP_001723079.1| DNA-damage-inducible protein D [Escherichia coli ATCC 8739] ref|ZP_03068036.1| DNA-damage-inducible protein D [Escherichia coli 101-1] ref|YP_003034344.1| DNA-damage-inducible protein D [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] 9 more sequence titles Length=274 Score = 455 bits (1171), Expect = 3e-126, Method: Compositional matrix adjust. Identities = 231/274 (84%), Positives = 243/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAG ATA DFAIFQNHGY+GLYGGLDQK Sbjct 121 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGGATAIDFAIFQNHGYRGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >emb|CBJ03393.1| dna-damage-inducible protein D [Escherichia coli ETEC H10407] Length=278 Score = 453 bits (1166), Expect = 1e-125, Method: Compositional matrix adjust. Identities = 230/274 (83%), Positives = 242/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAG ATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGGATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 185 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELP PQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPAPQVSIKQLENSVKITEKK 278 >gb|AAG58789.1|AE005591_13 DNA-damage-inducible protein [Escherichia coli O157:H7 str. EDL933] dbj|BAB37943.1| DNA-damage-inducible protein [Escherichia coli O157:H7 str. Sakai] gb|ACI75601.1| DNA-damage-inducible protein [Escherichia coli] gb|ACI75602.1| DNA-damage-inducible protein [Escherichia coli] gb|ACI75603.1| DNA-damage-inducible protein [Escherichia coli] gb|ACI75604.1| DNA-damage-inducible protein [Escherichia coli] gb|ACI75605.1| DNA-damage-inducible protein [Escherichia coli] Length=278 Score = 451 bits (1161), Expect = 5e-125, Method: Compositional matrix adjust. Identities = 231/274 (84%), Positives = 242/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQA VATATDFAIFQNHGYQGLYGGLDQK Sbjct 125 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAAVATATDFAIFQNHGYQGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQ KGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 185 AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 245 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 278 >ref|NP_290225.2| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EDL933] ref|NP_312547.2| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. Sakai] ref|ZP_02773727.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4113] 36 more sequence titles

ref|ZP_02784773.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4501] ref|ZP_02797394.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4196] ref|ZP_02804808.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4076] ref|ZP_02810529.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC869] ref|ZP_02823622.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC508] ref|ZP_03081588.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4024] ref|ZP_03250046.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4206] ref|ZP_03253304.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4045] ref|ZP_03262050.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4042] ref|YP_002273124.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4115] ref|ZP_03442588.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. TW14588] ref|YP_003080437.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. TW14359] ref|ZP_05947315.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. FRIK966] ref|YP_003501834.1| Pyridoxine biosynthesis enzyme [Escherichia coli O55:H7 str. CB9615] gb|EDU35291.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4196] gb|EDU54971.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4113] gb|EDU71483.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4076] gb|EDU88156.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4501] gb|EDU92963.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC869] gb|EDU97130.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC508] gb|EDZ77111.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4206] gb|EDZ81939.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4045] gb|EDZ89535.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4042] gb|ACI39305.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4115] gb|EEC31149.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. TW14588] gb|ACT74361.1| DNA-damage-inducible protein [Escherichia coli O157:H7 str. TW14359] gb|ADD58850.1| Pyridoxine biosynthesis enzyme [Escherichia coli O55:H7 str. CB9615] gb|EFW65953.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC1212] gb|EFX09160.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. G5101] gb|EFX14021.1| DNA-damage-inducible protein D [Escherichia coli O157:H- str. 493-89] gb|EFX18747.1| DNA-damage-inducible protein D [Escherichia coli O157:H- str. H 2687] gb|EFX23538.1| DNA-damage-inducible protein D [Escherichia coli O55:H7 str. 3256-97 TW 07815] gb|EFX28768.1| DNA-damage-inducible protein D [Escherichia coli O55:H7 str. USDA 5905] gb|EFX33357.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. LSU-61] gb|EGD61190.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. 1044] gb|EGD63661.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. 1125]

Length=274 Score = 451 bits (1160), Expect = 6e-125, Method: Compositional matrix adjust. Identities = 231/274 (84%), Positives = 242/274 (88%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQA VATATDFAIFQNHGYQGLYGGLDQK Sbjct 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAAVATATDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQ KGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 181 AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >ref|ZP_02778477.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4401] ref|ZP_02791073.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4486] gb|EDU77567.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4401] gb|EDU83145.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. EC4486] Length=274 Score = 449 bits (1155), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 230/274 (83%), Positives = 241/274 (87%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQA VATATDF IFQNHGYQGLYGGLDQK Sbjct 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAAVATATDFVIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQ KGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 181 AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >ref|ZP_05938453.1| DNA-damage-inducible protein D [Escherichia coli O157:H7 str. FRIK2000] Length=274 Score = 448 bits (1152), Expect = 6e-124, Method: Compositional matrix adjust. Identities = 230/274 (83%), Positives = 241/274 (87%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEK LFLRNELKEHNKQLVEAAQQA VATATDFAIFQNHGYQGLYGGLDQK Sbjct 121 DEAFKQLREDEKPLFLRNELKEHNKQLVEAAQQAAVATATDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQ KGLKK+QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVR Sbjct 181 AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >ref|ZP_03832069.1| DNA-damage-inducible protein D [Pectobacterium carotovorum subsp. carotovorum WPP14] Length=274 Score = 420 bits (1080), Expect = 1e-115, Method: Compositional matrix adjust. Identities = 205/274 (74%), Positives = 226/274 (82%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNE+HQPFE+++ + G E WSAR L LL Y ++R+F VL RA +ACE S + DH Sbjct 1 MNENHQPFEDLRQSGSEGHEYWSARDLAPLLDYRDWRNFQNVLGRAAQACETSNQEVSDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E V +GS A+R L+D+ LSRYACYLVVQNGDP+KPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKKVTLGSGAQRELEDVHLSRYACYLVVQNGDPSKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DE FK+LREDEKRLFLRNELKEHNKQLVEAAQQAGV T DFAIFQNHGYQGLYGGLDQK Sbjct 121 DEIFKRLREDEKRLFLRNELKEHNKQLVEAAQQAGVETTLDFAIFQNHGYQGLYGGLDQK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRK LKK+QKILDHMGSTELAANLFRATQTEEKL+RD V +K AN THFDVG+KVR Sbjct 181 AIHQRKELKKSQKILDHMGSTELAANLFRATQTEEKLRRDDVQNKHAANKTHFDVGQKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPE LPTP+ IKQLE K KK Sbjct 241 QTIQELGGTMPENLPTPEKGIKQLETRAKKPNKK 274 >ref|ZP_04638136.1| DNA-damage-inducible protein D [Yersinia intermedia ATCC 29909] gb|EEQ17654.1| DNA-damage-inducible protein D [Yersinia intermedia ATCC 29909] Length=278 Score = 417 bits (1071), Expect = 1e-114, Method: Compositional matrix adjust. Identities = 200/274 (72%), Positives = 228/274 (83%), Gaps = 0/274 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQ FE ++L + + E WSAR L LL Y ++R+F VL++A +ACE S + DH Sbjct 5 MNEHHQTFESLRLHSDDNNEHWSARDLAPLLDYRDWRNFQNVLSKAAQACEASDQNVSDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E V +GS A+R L D+ LSRYACYLVVQNGDP+KPVIA+GQTYFAIQTRRQELAD Sbjct 65 FVESTKKVILGSGAQRELDDVHLSRYACYLVVQNGDPSKPVIASGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DE FK+LRE+EKRLFLRNELKEHNK LVE AQQAGV T DFA+FQNHGYQGLYGGLDQK Sbjct 125 DEIFKKLRENEKRLFLRNELKEHNKHLVETAQQAGVETTLDFAVFQNHGYQGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 +IHQRKGLKK+QKILDHMGSTELAANLFRATQ EEKL+RD V SKQQAN THF+VG+KVR Sbjct 185 SIHQRKGLKKSQKILDHMGSTELAANLFRATQAEEKLRRDQVKSKQQANQTHFNVGQKVR 244 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTI+ELGGTMPE LPTP+ SIKQLE++ K KK Sbjct 245 QTIEELGGTMPENLPTPEKSIKQLESATKKLSKK 278 >ref|YP_003710540.1| DNA-damage-inducible protein [Xenorhabdus nematophila ATCC 19061] emb|CBJ88283.1| DNA-damage-inducible protein, part of SOS response [Xenorhabdus nematophila ATCC 19061] Length=271 Score = 408 bits (1048), Expect = 5e-112, Method: Compositional matrix adjust. Identities = 197/269 (73%), Positives = 225/269 (83%), Gaps = 0/269 (0%) Query 5 HQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 HQ FEEIKL++ +G E WSAR L LL Y ++R+F+ VL++A +AC+ S HF E Sbjct 3 HQLFEEIKLLSEDGIEYWSARDLAPLLDYKDWRNFLKVLSKALQACKASNQEPSYHFVEA 62 Query 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 MV +GS A+R + DI LSRYACYLVVQNGDP+KPVIAAGQTYFA+QTRRQELAD+EAF Sbjct 63 NKMVTLGSGAERKIDDIKLSRYACYLVVQNGDPSKPVIAAGQTYFAVQTRRQELADNEAF 122 Query 125 KQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQ 184 ++LREDEKRLFLRNELKEHNKQLVE AQ+AGV T DFAIFQNHGYQGLYGGLDQKAIHQ Sbjct 123 RKLREDEKRLFLRNELKEHNKQLVETAQRAGVETNIDFAIFQNHGYQGLYGGLDQKAIHQ 182 Query 185 RKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQ 244 +KGLKK+Q+ILDHMGSTELAANLFRATQ EEKL+RD V K QAN THFDVGRKVR TIQ Sbjct 183 QKGLKKSQRILDHMGSTELAANLFRATQAEEKLRRDNVKGKTQANQTHFDVGRKVRDTIQ 242 Query 245 ELGGTMPEELPTPQVSIKQLENSVKITEK 273 ELGGTMPE+LP+P+ SIKQLE K +K Sbjct 243 ELGGTMPEDLPSPEKSIKQLETIAKKLKK 271 >gb|ADI21503.1| hypothetical protein [uncultured myxobacterium HF0070_11L13] Length=199 Score = 408 bits (1048), Expect = 5e-112, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 76 RALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLF 135 RALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLF Sbjct 1 RALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLF 60 Query 136 LRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKIL 195 LRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKIL Sbjct 61 LRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKIL 120 Query 196 DHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP 255 DHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP Sbjct 121 DHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP 180 Query 256 TPQVSIKQLENSVKITEKK 274 TPQVSIKQLENSVKITEKK Sbjct 181 TPQVSIKQLENSVKITEKK 199 >ref|YP_002017876.1| hypothetical protein Ppha_0973 [Pelodictyon phaeoclathratiforme BU-1] gb|ACF43259.1| hypothetical protein Ppha_0973 [Pelodictyon phaeoclathratiforme BU-1] Length=362 Score = 403 bits (1036), Expect = 1e-110, Method: Compositional matrix adjust. Identities = 187/271 (69%), Positives = 226/271 (83%), Gaps = 0/271 (0%) Query 4 HHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEE 63 H++ FEEIK NG++ W ARQL K+L Y+E+R+F+PV+ +AK AC+NSG +++HF E Sbjct 83 HYKTFEEIKQTGRNGSDYWMARQLAKILDYAEFRNFLPVIEKAKRACQNSGQPVENHFVE 142 Query 64 ILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEA 123 + +MV IGS A+R ++ SRYACYL+VQN DP+KPVIA GQTYFAIQTRRQELADDEA Sbjct 143 MHEMVPIGSGAERKMESYAFSRYACYLIVQNSDPSKPVIANGQTYFAIQTRRQELADDEA 202 Query 124 FKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIH 183 FK+L+E+EKRLFLRNE++EHNKQLVE AQQAGV T DFAIFQNHGYQGLYGGLD K IH Sbjct 203 FKRLKEEEKRLFLRNEMREHNKQLVETAQQAGVETTLDFAIFQNHGYQGLYGGLDAKGIH 262 Query 184 QRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTI 243 QRKGLKK+Q ILD+MGSTELAANLFRATQT+EKL+R+ V K AN THFDVG+KVRQTI Sbjct 263 QRKGLKKSQHILDNMGSTELAANLFRATQTDEKLRRENVQGKTMANKTHFDVGKKVRQTI 322 Query 244 QELGGTMPEELPTPQVSIKQLENSVKITEKK 274 +ELGGTMPE+LP P+ +K+LE + EKK Sbjct 323 KELGGTMPEDLPKPEEDLKKLERRAQSPEKK 353 >ref|ZP_07782197.1| DNA-damage-inducible D domain protein [Escherichia coli 2362-75] gb|EFR15154.1| DNA-damage-inducible D domain protein [Escherichia coli 2362-75] Length=210 Score = 400 bits (1029), Expect = 8e-110, Method: Compositional matrix adjust. Identities = 195/200 (97%), Positives = 199/200 (99%), Gaps = 0/200 (0%) Query 75 KRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRL 134 KRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF+QLREDEKRL Sbjct 11 KRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFRQLREDEKRL 70 Query 135 FLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKI 194 FLRNELKEHNKQLVEAAQQAGVATA DFAIFQNHGY+GLYGGLDQKAIHQRKGLKK+QKI Sbjct 71 FLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQKAIHQRKGLKKSQKI 130 Query 195 LDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEEL 254 LDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEEL Sbjct 131 LDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEEL 190 Query 255 PTPQVSIKQLENSVKITEKK 274 PTPQV+IKQLENSVKITEKK Sbjct 191 PTPQVNIKQLENSVKITEKK 210 >ref|YP_001337739.1| DNA-damage-inducible protein D [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] ref|YP_002921944.1| DNA-damage-inducible protein D [Klebsiella pneumoniae NTUH-K2044] gb|ABR79472.1| putative DNA-damage-inducible protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] dbj|BAH65877.1| putative DNA-damage-inducible protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length=274 Score = 397 bits (1020), Expect = 1e-108, Method: Compositional matrix adjust. Identities = 193/269 (71%), Positives = 222/269 (82%), Gaps = 1/269 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNE QPFE I+ + G E WSAR LG LL Y E+R+F V+ +A +CE SGH DH Sbjct 1 MNEQ-QPFEAIRKSDEAGREYWSARNLGPLLDYKEWRNFYKVIAKAIISCEASGHPSADH 59 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV++GS A R L+D LSRYACYLVVQNGDP+KPVIAAGQTYFA+QTRRQEL D Sbjct 60 FVETNKMVELGSGASRNLEDFHLSRYACYLVVQNGDPSKPVIAAGQTYFALQTRRQELQD 119 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 D+ FK LREDEKRLFLRNELKEHNK LVE AQ+AGV T DFA+FQNHGY+GLYGGLDQK Sbjct 120 DQIFKSLREDEKRLFLRNELKEHNKHLVETAQRAGVETTLDFAVFQNHGYKGLYGGLDQK 179 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIH+RKGLKK+QKILD+MGSTELAANLFRATQTEEKL+RD V+SKQ AN TH+DVG+KVR Sbjct 180 AIHERKGLKKSQKILDYMGSTELAANLFRATQTEEKLRRDAVDSKQLANKTHYDVGQKVR 239 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVK 269 QTI++LGGTMPE LP+P+ SI+QL + K Sbjct 240 QTIKDLGGTMPEALPSPEKSIQQLTIAAK 268 >ref|YP_393456.1| DNA-damage-inducible protein D [Sulfurimonas denitrificans DSM 1251] gb|ABB44221.1| DNA-damage-inducible protein d [Sulfurimonas denitrificans DSM 1251] Length=281 Score = 390 bits (1001), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 185/272 (68%), Positives = 221/272 (81%), Gaps = 0/272 (0%) Query 3 EHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFE 62 +HHQ FEEIK I+ NG E W AR LGKLL Y+++R+F V+ +AKEAC NSG ++DH Sbjct 8 QHHQTFEEIKQIDKNGNEFWYARALGKLLDYTDFRNFTKVIDKAKEACVNSGFDVNDHIV 67 Query 63 EILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDE 122 E+ + + G AK + LSRYACYLVVQN DP+KPV+A+GQTYFAIQTRRQEL +DE Sbjct 68 EVNEEITHGKGAKNSYPSFALSRYACYLVVQNADPSKPVVASGQTYFAIQTRRQELQNDE 127 Query 123 AFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAI 182 AF QLREDEKR+FLRNELKEHNKQLVE AQ AGV T DFAIFQNHGY+GLYGGLD K I Sbjct 128 AFAQLREDEKRVFLRNELKEHNKQLVETAQLAGVETDLDFAIFQNHGYKGLYGGLDAKGI 187 Query 183 HQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQT 242 H++KGLKK+ KILD+MGSTELAANLFRATQTEEKLKRD ++ K +AN TH++VG+KVR+T Sbjct 188 HEKKGLKKSHKILDYMGSTELAANLFRATQTEEKLKRDNIHGKTKANQTHYEVGKKVRET 247 Query 243 IQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 I ELGGTMPE+LPTP+ S+ ++E S K E K Sbjct 248 IAELGGTMPEDLPTPKESVSKIEKSHKSLEDK 279 >ref|YP_001344928.1| DNA-damage-inducible protein D [Actinobacillus succinogenes 130Z] gb|ABR74993.1| DNA-damage-inducible protein [Actinobacillus succinogenes 130Z] Length=277 Score = 390 bits (1001), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 186/269 (69%), Positives = 220/269 (81%), Gaps = 0/269 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNE Q FE IK ++ G E WSAR+L +L Y ++++F V+ +A ACE S + H Sbjct 1 MNELTQTFEGIKQVDEQGNEFWSARELAPILEYKKWQNFQLVIQKAIVACETSNINVSYH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F EI MV++GS ++R + D +LSRYACYL+VQNGDP+KPVIAAGQTYFA+QTRRQELAD Sbjct 61 FTEISKMVRLGSGSQRQVGDFLLSRYACYLIVQNGDPSKPVIAAGQTYFAVQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DE F+QL+ED+KRLFLRNELKEHNKQLV+ AQ+AGVA+ DFAIFQNHGY+GLYGGLD K Sbjct 121 DENFQQLQEDQKRLFLRNELKEHNKQLVKTAQKAGVASNLDFAIFQNHGYKGLYGGLDNK 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIH RKGLK NQKILDHMGSTELAANLFRATQ EEKL+RD V +K +AN THFDVG+KVR Sbjct 181 AIHARKGLKANQKILDHMGSTELAANLFRATQAEEKLRRDNVQTKTEANQTHFDVGQKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVK 269 QTIQELGGTMPE LPTP S+K +E +K Sbjct 241 QTIQELGGTMPENLPTPGKSVKSIETHLK 269 >ref|ZP_07143483.1| putative DNA-damage-inducible protein D [Escherichia coli MS 187-1] gb|EFK27509.1| putative DNA-damage-inducible protein D [Escherichia coli MS 187-1] Length=244 Score = 387 bits (994), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 197/240 (82%), Positives = 209/240 (87%), Gaps = 0/240 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQAG ATA DFAIFQNHGY+GLYGGLDQK Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGGATAIDFAIFQNHGYRGLYGGLDQK 184 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct 185 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 244 >ref|YP_002007188.1| DNA-damage-inducible protein d [Cupriavidus taiwanensis LMG 19424] emb|CAQ71127.1| DNA-damage-inducible protein, part of SOS response [Cupriavidus taiwanensis LMG 19424] Length=289 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 178/263 (67%), Positives = 215/263 (81%), Gaps = 0/263 (0%) Query 3 EHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFE 62 +HH+ FE I+ + +G E W ARQL +L YS+YRHF+ V+ RA+EAC NSG +DHFE Sbjct 9 QHHKTFESIRHEDEHGFEFWRARQLAGVLEYSQYRHFVAVIDRAREACRNSGQPPEDHFE 68 Query 63 EILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDE 122 ++L MV+IGS A R ++D LSRYACYL+VQNGDP+KPVIA GQTYFAIQTRRQELAD+ Sbjct 69 DVLTMVEIGSGAHREIEDCRLSRYACYLIVQNGDPSKPVIANGQTYFAIQTRRQELADEA 128 Query 123 AFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAI 182 F+ L EDE+RL LR E+ EHN+ L AA+QAGVATA D+A+FQ+HGY+GLYGGL K I Sbjct 129 RFRTLTEDERRLMLRGEMAEHNRALTAAAKQAGVATALDYAVFQDHGYKGLYGGLGAKDI 188 Query 183 HQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQT 242 H KGLK++QKILDHMGSTELAANLFRATQTEEKL+R+ V K+QAN THF VG KVRQT Sbjct 189 HVSKGLKRSQKILDHMGSTELAANLFRATQTEEKLRRENVQGKKQANQTHFQVGAKVRQT 248 Query 243 IQELGGTMPEELPTPQVSIKQLE 265 I +LGGTMPE+LPTP+ SIKQ+E Sbjct 249 IADLGGTMPEKLPTPEKSIKQIE 271 >ref|ZP_07328980.1| DNA-damage-inducible protein D [Acetivibrio cellulolyticus CD2] gb|EFL59736.1| DNA-damage-inducible protein D [Acetivibrio cellulolyticus CD2] Length=278 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 168/269 (62%), Positives = 206/269 (76%), Gaps = 2/269 (0%) Query 6 QPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 + FEEIK IN GAE W R L K+LGY + +F+ ++ +AKEAC+NS DH E+ Sbjct 9 RTFEEIKKINEYGAEYWYGRDLAKVLGYKRWENFVKLIDKAKEACKNSNINASDHIAEVS 68 Query 66 DMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFK 125 +M++ G AKR + D LSRYACYL+VQNGDP K VIA GQTYFA++TR +E+ EA + Sbjct 69 NMIETGKTAKREVDDFYLSRYACYLIVQNGDPRKEVIALGQTYFAVKTREREM--QEAVE 126 Query 126 QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQR 185 QL ED KRL +RNELKEHNK LVEAA+ AGV T D+A+FQN+GY GLYGGL K IH+R Sbjct 127 QLTEDGKRLAIRNELKEHNKSLVEAAKNAGVETNVDYAVFQNYGYMGLYGGLKAKDIHER 186 Query 186 KGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQE 245 KGLKK+QKILDHMGSTELAANLFRATQT+EKL+RD + K++AN TH VG+KVRQTI+E Sbjct 187 KGLKKSQKILDHMGSTELAANLFRATQTDEKLRRDNIKGKEKANETHLYVGKKVRQTIEE 246 Query 246 LGGTMPEELPTPQVSIKQLENSVKITEKK 274 LGGTMPE LPTP+ S KQ+E ++ KK Sbjct 247 LGGTMPENLPTPKKSAKQIEKEIETKNKK 275 >ref|ZP_02353916.1| putative DNA-damage-inducible protein [Burkholderia oklahomensis EO147] Length=279 Score = 348 bits (892), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 176/262 (67%), Positives = 209/262 (79%), Gaps = 0/262 (0%) Query 4 HHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEE 63 HH+ FE IK + GAE WSAR L LL Y + F V+ +A EACE SG+ + DHF + Sbjct 10 HHRTFESIKQTSETGAEYWSARALQPLLEYGTWDKFRRVIDKAAEACERSGNVVADHFSQ 69 Query 64 ILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEA 123 + MV++GS A+RAL+D LSRYACYL+VQNGDP+KPVIA GQTYFA+QTRRQELAD+ Sbjct 70 VGKMVELGSGAQRALEDFHLSRYACYLIVQNGDPSKPVIANGQTYFAMQTRRQELADEAT 129 Query 124 FKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIH 183 F + EDEKRL +RNEL HNK L AA++AGV T ++A+FQ+HGY+GLYGGL K IH Sbjct 130 FARFGEDEKRLAIRNELATHNKHLAAAAKEAGVETPIEYAVFQDHGYKGLYGGLGNKEIH 189 Query 184 QRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTI 243 +KGLKKNQKILDHMGSTELAANLFRATQTEEKL+RDG+ KQ AN TH +VG+KVRQTI Sbjct 190 AKKGLKKNQKILDHMGSTELAANLFRATQTEEKLRRDGIKGKQHANRTHHEVGKKVRQTI 249 Query 244 QELGGTMPEELPTPQVSIKQLE 265 QELGGTMPEELPTP+ SIKQL+ Sbjct 250 QELGGTMPEELPTPETSIKQLQ 271 >ref|ZP_08305192.1| putative DNA-damage-inducible protein D [Klebsiella sp. MS 92-3] gb|EGF62688.1| putative DNA-damage-inducible protein D [Klebsiella sp. MS 92-3] Length=215 Score = 338 bits (867), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 161/204 (78%), Positives = 182/204 (89%), Gaps = 0/204 (0%) Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV++GS A R L+D LSRYACYLVVQNGDP+KPVIAAGQTYFA+QTRRQEL D Sbjct 1 FVETNKMVELGSGASRNLEDFHLSRYACYLVVQNGDPSKPVIAAGQTYFALQTRRQELQD 60 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 D+ FK LREDEKRLFLRNELKEHNK LVE AQ+AGV T DFA+FQNHGY+GLYGGLDQK Sbjct 61 DQIFKSLREDEKRLFLRNELKEHNKHLVETAQRAGVETTLDFAVFQNHGYKGLYGGLDQK 120 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIH+RKGLKK+QKILD+MGSTELAANLFRATQTEEKL+RD V+SKQ AN TH+DVG+KVR Sbjct 121 AIHERKGLKKSQKILDYMGSTELAANLFRATQTEEKLRRDAVDSKQLANKTHYDVGQKVR 180 Query 241 QTIQELGGTMPEELPTPQVSIKQL 264 QTI++LGGTMPE LP+P+ SI+QL Sbjct 181 QTIKDLGGTMPEALPSPEKSIQQL 204 >ref|ZP_02477549.1| DNA-damage-inducible protein D [Haemophilus parasuis 29755] gb|EDS25305.1| DNA-damage-inducible protein D [Haemophilus parasuis 29755] Length=299 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 171/266 (64%), Positives = 209/266 (78%), Gaps = 2/266 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE+IK N E WSAR+L LLGYS++ +F ++RA ++CE +G+++ +HF E+ M Sbjct 27 FEQIKQTE-NNREFWSARELQPLLGYSKWENFQQTISRAMQSCETAGYSVLEHFPEVRKM 85 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 IG+ A+R +D LSRYACYL+VQNGDP K IA GQTYFAIQTRRQEL D EAF QL Sbjct 86 FIIGNGAQREQQDYQLSRYACYLIVQNGDPKKEAIAVGQTYFAIQTRRQELTD-EAFTQL 144 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 ED +RL LR +L+EHN +L EAAQ++GV T D+AIFQNHGY+GLYGG+D AIHQ KG Sbjct 145 SEDRQRLLLRQQLREHNSELAEAAQKSGVETPVDYAIFQNHGYKGLYGGMDYNAIHQNKG 204 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 LK++QKILDHMGSTELAANLFRATQT +KLKR+ + KQQAN TH+DVG+KVRQTI ELG Sbjct 205 LKQSQKILDHMGSTELAANLFRATQTADKLKRENIQGKQQANQTHYDVGKKVRQTIAELG 264 Query 248 GTMPEELPTPQVSIKQLENSVKITEK 273 GTMPE LPTP+ SIK+LE+ K EK Sbjct 265 GTMPENLPTPEKSIKKLESEQKKREK 290 >ref|ZP_07334163.1| DNA-damage-inducible protein D [Desulfovibrio fructosovorans JJ] gb|EFL50697.1| DNA-damage-inducible protein D [Desulfovibrio fructosovorans JJ] Length=283 Score = 331 bits (849), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 172/266 (64%), Positives = 204/266 (76%), Gaps = 0/266 (0%) Query 4 HHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEE 63 HH+ FE+I+ + G E W AR+LG +L Y + R+F V+ +AK ACENSG DHF E Sbjct 10 HHETFEDIRHADNGGNEYWLARELGPVLQYQDLRNFFQVIEKAKIACENSGQDSGDHFGE 69 Query 64 ILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEA 123 + MVK+GS A R ++D LSRYACYL+VQNGDP KPVIA GQTYFAIQTRRQE+ D ++ Sbjct 70 VTTMVKLGSGATREVQDFKLSRYACYLIVQNGDPTKPVIALGQTYFAIQTRRQEIGDGKS 129 Query 124 FKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIH 183 F+ L EDE+RL LR ++ HNK LV A++AGV T D+AIFQ+HGY+GLYGGL K IH Sbjct 130 FESLSEDERRLVLRGDIAVHNKALVAEAKKAGVQTPLDYAIFQDHGYRGLYGGLGAKDIH 189 Query 184 QRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTI 243 RKGLKKNQKILDHMGSTELAANLFRATQ EEKL+RD V K AN TH VG KVRQTI Sbjct 190 ARKGLKKNQKILDHMGSTELAANLFRATQAEEKLRRDKVKGKIAANKTHRAVGEKVRQTI 249 Query 244 QELGGTMPEELPTPQVSIKQLENSVK 269 +ELGGTMPE LPTP+ SIK+LE+ K Sbjct 250 EELGGTMPENLPTPEKSIKKLESERK 275 >ref|ZP_06996513.1| DNA-damage-inducible protein D [Bacteroides sp. 1_1_14] gb|EFI02979.1| DNA-damage-inducible protein D [Bacteroides sp. 1_1_14] Length=249 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 153/243 (62%), Positives = 190/243 (78%), Gaps = 1/243 (0%) Query 3 EHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFE 62 +H+ FE+I+ I+ NG E WSAR + K+L YSEYRHFIPV+ +AKEAC NSG DHFE Sbjct 7 QHNSIFEQIRRIDENGNEFWSARDMAKVLEYSEYRHFIPVIEKAKEACRNSGQNFMDHFE 66 Query 63 EILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDE 122 + LDM++IG KR + + LSRYACYL++QN DP+K ++A GQTYFA+QTR E+ + Sbjct 67 DYLDMIEIGKGGKRPVDSVKLSRYACYLIIQNADPSKEIVANGQTYFAVQTRIAEIKQMD 126 Query 123 AFKQLR-EDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKA 181 + L EDEKRLFLRNEL +HN QL AA+ AGV + D+AIFQN+GY+GLYGGLD KA Sbjct 127 EYNYLSTEDEKRLFLRNELAKHNAQLASAAKDAGVLDSKDYAIFQNYGYKGLYGGLDAKA 186 Query 182 IHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQ 241 IH KGLKK+QKILDHMGSTELAANLFRATQTE+KL+R+ + KQ+AN TH+ VG KVRQ Sbjct 187 IHTHKGLKKSQKILDHMGSTELAANLFRATQTEDKLRREQIQGKQKANQTHYQVGAKVRQ 246 Query 242 TIQ 244 TI+ Sbjct 247 TIK 249 >ref|YP_002389121.1| DNA-damage-inducible protein D [Escherichia coli IAI1] ref|ZP_07125315.1| hypothetical protein HMPREF9536_05609 [Escherichia coli MS 84-1] ref|ZP_07209998.1| hypothetical protein HMPREF9347_02480 [Escherichia coli MS 124-1] emb|CAR00613.1| DNA-damage-inducible protein D [Escherichia coli IAI1] gb|EFJ84161.1| hypothetical protein HMPREF9536_05609 [Escherichia coli MS 84-1] gb|EFK68602.1| hypothetical protein HMPREF9347_02480 [Escherichia coli MS 124-1] gb|EFU34000.1| DNA-damage-inducible protein [Escherichia coli MS 85-1] Length=204 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 154/154 (100%), Positives = 154/154 (100%), Gaps = 0/154 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct 5 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQA 154 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQA Sbjct 125 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQA 158 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 49/53 (92%), Positives = 50/53 (94%), Gaps = 0/53 (0%) Query 222 VNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 V + QQANTTHFDVG KVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct 152 VEAAQQANTTHFDVGSKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 204 >ref|YP_002001192.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae NCCP11945] gb|ACF29258.1| DinD [Neisseria gonorrhoeae NCCP11945] Length=283 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 155/266 (58%), Positives = 195/266 (73%), Gaps = 0/266 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 M + FE K I+ G E WSAR L ++L YSE+R+F + +A ACE SG+ + H Sbjct 1 MTTENNAFENAKHIDETGNEYWSARTLQQILEYSEWRNFQRAIDKAITACETSGNDKNHH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E M+ +G +R + D LSRYACYL+VQNGDP+K VIAAGQTYFA+Q RRQEL D Sbjct 61 FVETNKMIALGKGGQREVADYRLSRYACYLIVQNGDPSKSVIAAGQTYFAVQARRQELQD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 + AF+ L ED++RL L +L+EHN L AA+ AGV ++A+FQNHGY+GLYGGLD++ Sbjct 121 EAAFRSLGEDKQRLLLCRQLREHNTDLAAAAKDAGVEKPVEYAVFQNHGYRGLYGGLDKQ 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 IH RKGLKK+Q+ILDHM ++E AANLFRATQTEEKL+R + K QAN HF+VG+KVR Sbjct 181 GIHSRKGLKKSQRILDHMNASEPAANLFRATQTEEKLRRKNIQGKTQANRVHFEVGQKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLEN 266 QTI+ELGG MPE P P+ SIKQLEN Sbjct 241 QTIEELGGIMPENQPVPEKSIKQLEN 266 >ref|ZP_07959368.1| DNA-damage-inducible protein d [Lachnospiraceae bacterium 8_1_57FAA] ref|ZP_08338982.1| hypothetical protein HMPREF1025_02565 [Lachnospiraceae bacterium 3_1_46FAA] ref|ZP_08618761.1| hypothetical protein HMPREF0990_01155 [Lachnospiraceae bacterium 1_1_57FAA] gb|EFV19614.1| DNA-damage-inducible protein d [Lachnospiraceae bacterium 8_1_57FAA] gb|EGG82124.1| hypothetical protein HMPREF1025_02565 [Lachnospiraceae bacterium 3_1_46FAA] gb|EGN46419.1| hypothetical protein HMPREF0990_01155 [Lachnospiraceae bacterium 1_1_57FAA] Length=297 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 158/267 (59%), Positives = 197/267 (73%), Gaps = 2/267 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE IK IN G E W AR+L + L Y+E+R+F V+ RA ACENSG+ + HF E+ Sbjct 33 FESIKHINEYGEEFWYARELQRALEYTEWRNFSRVIDRAVTACENSGNDVFHHFVEVNKT 92 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + + +A + + D LSRYACYL+VQNGD K VIA GQTYFA++TR+QEL D+ F +L Sbjct 93 IDMPKSATKEITDYALSRYACYLIVQNGDSRKKVIALGQTYFAVKTRQQELIDN--FNEL 150 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 ED+KRL +R E+ EHNK LVEAA+ AGV T D+AIFQN+GY+GLYGG+D KAIH KG Sbjct 151 NEDQKRLAIRREMAEHNKLLVEAAKNAGVETNLDYAIFQNYGYRGLYGGMDAKAIHHHKG 210 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 LK +QKILDHMG ELAANLFRATQTE K+KRD + K+ AN TH++VG++VR TI LG Sbjct 211 LKPSQKILDHMGYEELAANLFRATQTEAKIKRDNIQGKENANQTHYNVGKEVRDTISRLG 270 Query 248 GTMPEELPTPQVSIKQLENSVKITEKK 274 GTMPE+LPTP SIKQ+E K E + Sbjct 271 GTMPEDLPTPTKSIKQIEREQKKLEDR 297 >ref|ZP_06735000.1| DNA-damage-inducible protein D [Neisseria elongata subsp. glycolytica ATCC 29315] gb|EFE49407.1| DNA-damage-inducible protein D [Neisseria elongata subsp. glycolytica ATCC 29315] Length=301 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 159/266 (59%), Positives = 199/266 (74%), Gaps = 0/266 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 M + FE K I+ G E WSAR L ++L YSE+R+F + +A ACE SG+ H Sbjct 1 MTTENNAFENAKHIDETGNEYWSARTLQQILEYSEWRNFQRAIDKAITACETSGNDKKHH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E M+ +G +R + D LSRYACYL+VQNGDP+K VIAAGQTYFA+QTRRQEL D Sbjct 61 FVETNKMIALGKGGQREVPDYRLSRYACYLIVQNGDPSKSVIAAGQTYFAVQTRRQELQD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 + AF+ L ED++RL LR +L+EHN L AA+ AGV ++A+FQNHGY+GLYGGLD++ Sbjct 121 EAAFRSLGEDKQRLLLRRQLREHNTDLAAAAKDAGVEKPVEYAVFQNHGYRGLYGGLDKQ 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 IH RKGLKK+QKILDHM ++ELAANLFRATQTEEKL+R+ + K QAN HF+VG+KVR Sbjct 181 GIHSRKGLKKSQKILDHMNASELAANLFRATQTEEKLRRENIQGKTQANRVHFEVGQKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLEN 266 QTI+ELGG MPE+ P P+ SIKQLEN Sbjct 241 QTIEELGGIMPEDQPVPEKSIKQLEN 266 >ref|YP_003249272.1| DNA-damage-inducible protein D [Fibrobacter succinogenes subsp. succinogenes S85] gb|ACX74790.1| DNA-damage-inducible protein D [Fibrobacter succinogenes subsp. succinogenes S85] gb|ADL24787.1| DNA-damage-inducible protein D [Fibrobacter succinogenes subsp. succinogenes S85] Length=279 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 153/260 (58%), Positives = 198/260 (76%), Gaps = 2/260 (0%) Query 6 QPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 Q FE++K I+ NG E W AR+L K L Y+EY F+PV+ +A EAC +G +HF + Sbjct 12 QTFEKLKHIDENGNEFWYARELQKALEYTEYGKFLPVIEKAIEACRKTGFDEGNHFAHVS 71 Query 66 DMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFK 125 +MV+IGS A+R + LSRYACYL+V NGDP K VIA GQTYFA++TR++E++D+ A Sbjct 72 EMVRIGSGAERKMDSYKLSRYACYLIVMNGDPRKEVIALGQTYFAVKTRQKEISDEVA-- 129 Query 126 QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQR 185 QL EDEKRL +R+E+ NK L +A+ AGV T D+A+FQN GYQGLY GL K IH+R Sbjct 130 QLSEDEKRLAIRDEVTIRNKFLASSAKAAGVETPVDYAVFQNRGYQGLYNGLGMKDIHKR 189 Query 186 KGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQE 245 KGLKKN++ILDHMG+TELAANLFR TQT++KL+R+ + K+ AN THF VG+KVRQTI E Sbjct 190 KGLKKNEQILDHMGATELAANLFRITQTDDKLRRENIKGKELANETHFAVGKKVRQTIAE 249 Query 246 LGGTMPEELPTPQVSIKQLE 265 LGGTMPE LPTP++S K+L+ Sbjct 250 LGGTMPENLPTPKISAKKLK 269 >ref|ZP_06864064.1| DNA-damage-inducible protein D [Neisseria polysaccharea ATCC 43768] gb|EFH23163.1| DNA-damage-inducible protein D [Neisseria polysaccharea ATCC 43768] Length=283 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 159/266 (59%), Positives = 199/266 (74%), Gaps = 0/266 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 M + FE K I+ G E WSAR L ++L YSE+R+F + +A ACE SG+ + H Sbjct 1 MTTKNNAFENAKHIDETGNEYWSARTLQQILEYSEWRNFQRAIDKAITACETSGNGKNHH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E M+ +G +R + D LSRYACYL+VQNGDP+K VIAAGQTYFA+QTRRQEL D Sbjct 61 FVETNKMIALGKGGQREVPDYRLSRYACYLIVQNGDPSKSVIAAGQTYFAVQTRRQELQD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 + AF+ L ED++RL LR +L+EHN L AA+ AGV ++A+FQNHGY+GLYGGLD++ Sbjct 121 EAAFRSLGEDKQRLLLRRQLREHNTDLAAAAKDAGVEKPVEYAVFQNHGYRGLYGGLDKQ 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 IH RKGLKK+QKILDHM ++ELAANLFRATQTEEKL+R+ + K QAN HF+VG+KVR Sbjct 181 GIHSRKGLKKSQKILDHMNASELAANLFRATQTEEKLRRENIQGKTQANRVHFEVGQKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLEN 266 QTI+ELGG MPE P P+ SIKQLEN Sbjct 241 QTIEELGGIMPENQPVPEKSIKQLEN 266 >ref|YP_004048981.1| DNA damage inducible protein [Neisseria lactamica ST-640] emb|CBN87621.1| putative DNA damage inducible protein [Neisseria lactamica 020-06] Length=283 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 158/266 (59%), Positives = 198/266 (74%), Gaps = 0/266 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 M + FE K I+ G E WSAR L ++L YSE+R+F + +A ACE SG+ + H Sbjct 1 MTTKNNAFENAKHIDETGNEYWSARTLQQILEYSEWRNFQRAIDKAITACETSGNDKNHH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F M+ +G +R + D LSRYACYL+VQNGDP+K VIAAGQTYFA+QTRRQEL D Sbjct 61 FVGTNKMIVLGKGGQREVPDYRLSRYACYLIVQNGDPSKSVIAAGQTYFAVQTRRQELQD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 + AF+ L ED++RL LR +L+EHN L AA+ AGV ++A+FQNHGY+GLYGGLD++ Sbjct 121 EAAFRSLGEDKQRLLLRRQLREHNTDLAAAAKDAGVEKPVEYAVFQNHGYRGLYGGLDKQ 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 IH RKGLKK+QKILDHM ++ELAANLFRATQTEEKL+R+ + K QAN HF+VG+KVR Sbjct 181 GIHSRKGLKKSQKILDHMNASELAANLFRATQTEEKLRRENIQGKTQANRVHFEVGQKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLEN 266 QTI+ELGG MPE P P+ SIKQLEN Sbjct 241 QTIEELGGIMPENQPVPEKSIKQLEN 266 >emb|CBL14929.1| hypothetical protein RBR_05470 [Ruminococcus bromii L2-63] Length=280 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 166/269 (61%), Positives = 207/269 (76%), Gaps = 4/269 (1%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE IK IN G E W AR+L ++L YS++R+F + RA +CENSG+ ID+HFEE + Sbjct 12 FENIKQINEYGQEFWYARELQEVLEYSQWRNFYEAVQRAAVSCENSGYDIDEHFEECEAV 71 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 KIG+ A R +KDI LSRYACYL+V NGDP K +I+ GQT FA++TR QEL+ E F L Sbjct 72 RKIGNGANRKVKDIKLSRYACYLIVMNGDPQKEIISLGQTCFAVKTREQELS--ENFDSL 129 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 ED KRL +RNELK+HN L +AA AGV D+AIFQN+GY+GLYGGL K IH +KG Sbjct 130 SEDAKRLAIRNELKKHNSMLADAAHDAGVVEQRDYAIFQNYGYKGLYGGLGAKEIHNKKG 189 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 LKK+QKILD+MGSTELAANLFRATQTEEKL+RD + KQ+AN TH+ VG+KVR+TI+ELG Sbjct 190 LKKSQKILDYMGSTELAANLFRATQTEEKLRRDNIKGKQEANQTHYHVGKKVRETIKELG 249 Query 248 GTMPEELPTPQVSIKQLENSVK--ITEKK 274 GTMPE+LPTP+ SIK++E + IT+KK Sbjct 250 GTMPEDLPTPKSSIKEIEQKSQKTITKKK 278 >ref|YP_207561.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae FA 1090] ref|ZP_04718521.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae 35/02] ref|ZP_04720634.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae DGI18] 31 more sequence titles

ref|ZP_04722701.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae FA6140] ref|ZP_04724846.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae FA19] ref|ZP_04727005.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae MS11] ref|ZP_04731604.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae PID1] ref|ZP_04733753.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae PID24-1] ref|ZP_04736052.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae PID332] ref|ZP_04738233.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae SK-92-679] ref|ZP_04740461.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae SK-93-1035] ref|ZP_05106490.1| DNA-damage-inducible protein [Neisseria gonorrhoeae 1291] ref|ZP_05794743.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae DGI2] ref|ZP_06128624.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae 35/02] ref|ZP_06130620.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae FA19] ref|ZP_06132752.1| DNA-damage-inducible protein [Neisseria gonorrhoeae MS11] ref|ZP_06137412.1| DNA-damage-inducible protein [Neisseria gonorrhoeae PID1] ref|ZP_06148587.1| DNA-damage-inducible protein [Neisseria gonorrhoeae PID332] ref|ZP_06150814.1| DNA-damage-inducible protein [Neisseria gonorrhoeae SK-92-679] ref|ZP_06153059.1| DNA-damage-inducible protein [Neisseria gonorrhoeae SK-93-1035] ref|ZP_06569960.1| DNA-damage-inducible protein [Neisseria gonorrhoeae DGI2] ref|ZP_06643599.1| dinD, DNA-damage-inducible protein D [Neisseria gonorrhoeae F62] gb|AAW89149.1| putative DNA damage inducible protein [Neisseria gonorrhoeae FA 1090] gb|EEH61704.1| DNA-damage-inducible protein [Neisseria gonorrhoeae 1291] gb|EEZ43264.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae 35/02] gb|EEZ45260.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae FA19] gb|EEZ47392.1| DNA-damage-inducible protein [Neisseria gonorrhoeae MS11] gb|EEZ52052.1| DNA-damage-inducible protein [Neisseria gonorrhoeae PID1] gb|EEZ54409.1| DNA-damage-inducible protein [Neisseria gonorrhoeae PID332] gb|EEZ56636.1| DNA-damage-inducible protein [Neisseria gonorrhoeae SK-92-679] gb|EEZ58881.1| DNA-damage-inducible protein [Neisseria gonorrhoeae SK-93-1035] gb|EFE03141.1| DNA-damage-inducible protein [Neisseria gonorrhoeae DGI2] gb|EFF39137.1| dinD, DNA-damage-inducible protein D [Neisseria gonorrhoeae F62] gb|ADV07412.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae TCDC-NG08107]

Length=283 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 156/266 (58%), Positives = 196/266 (73%), Gaps = 0/266 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 M + FE K I+ G E WSAR L ++L YSE+R+F + +A ACE SG+ + H Sbjct 1 MTTENNAFENAKHIDETGNEYWSARTLQQILEYSEWRNFQRAIDKAITACETSGNDKNHH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E M+ +G +R + D LSRYACYL+VQNGDP+K VIAAGQTYFA+Q RRQEL D Sbjct 61 FVETNKMIALGKGGQREVADYRLSRYACYLIVQNGDPSKSVIAAGQTYFAVQARRQELQD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 + AF+ L ED++RL LR +L+EHN L AA+ AGV ++A+FQNHGY+GLYGGLD++ Sbjct 121 EAAFRSLGEDKQRLLLRRQLREHNTDLAAAAKDAGVEKPVEYAVFQNHGYRGLYGGLDKQ 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 IH RKGLKK+Q+ILDHM ++E AANLFRATQTEEKL+R + K QAN HF+VG+KVR Sbjct 181 GIHSRKGLKKSQRILDHMNASEPAANLFRATQTEEKLRRKNIQGKTQANRVHFEVGQKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLEN 266 QTI+ELGG MPE P P+ SIKQLEN Sbjct 241 QTIEELGGIMPENQPVPEKSIKQLEN 266 >ref|YP_003831239.1| DNA-damage-inducible protein [Butyrivibrio proteoclasticus B316] gb|ADL34657.1| DNA-damage-inducible protein [Butyrivibrio proteoclasticus B316] Length=286 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 149/261 (57%), Positives = 195/261 (74%), Gaps = 3/261 (1%) Query 5 HQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 ++ FE+IK + +G+E WSAR+L +L Y+++R+F V+ RA ACENSGHT+ D F E+ Sbjct 9 YRRFEDIKHVREDGSEFWSARELAPVLEYNQWRNFNNVINRAMIACENSGHTVSDDFAEV 68 Query 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 +V+ G+ K KD LSRYACYL+VQNGDP K VIA GQTYFAIQT RQELAD + Sbjct 69 SKIVEAGATTK-PTKDYELSRYACYLIVQNGDPRKEVIALGQTYFAIQTYRQELADH--Y 125 Query 125 KQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQ 184 QL ED +RL +R ++K+ N+ L E A AGV T +F+IFQN GY GLYGGLD IH+ Sbjct 126 NQLDEDRRRLVVRGDIKQWNQLLAETAHDAGVITNEEFSIFQNAGYMGLYGGLDVDDIHK 185 Query 185 RKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQ 244 RKGL +QKILD+MGSTEL ANLFR +QTEEKL++D + +A TH+ VGR+VR+ I+ Sbjct 186 RKGLTISQKILDYMGSTELIANLFRISQTEEKLRKDNIQGADKATQTHYAVGREVRKAIE 245 Query 245 ELGGTMPEELPTPQVSIKQLE 265 ++GGTMPE+LPTP+ SI+Q+E Sbjct 246 KIGGTMPEDLPTPEKSIQQIE 266 >gb|EGL77555.1| DNA-damage-inducible protein D family protein [Veillonella parvula ACS-068-V-Sch12] Length=286 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 148/261 (56%), Positives = 193/261 (73%), Gaps = 3/261 (1%) Query 5 HQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 ++ FE+IK I +G+E WSAR+L +L YS++R+F V+ RA ACENSGH + F E+ Sbjct 9 YRQFEDIKYIRKDGSEYWSARELAAVLDYSQWRNFQKVIDRAMIACENSGHEVAYDFAEV 68 Query 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 +V+ G+ +K ++KD L+RYACYL+VQNGDP K VIA GQTYFAIQT RQE+AD F Sbjct 69 SKVVEAGATSK-SIKDYELTRYACYLIVQNGDPRKEVIALGQTYFAIQTYRQEIADH--F 125 Query 125 KQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQ 184 QL ED +RL +R ++K+ N+ LVE A AGV T +FAIFQN GY GLYGGLD + IH Sbjct 126 NQLDEDRRRLVVRGDIKQWNQLLVETAHDAGVITNEEFAIFQNAGYMGLYGGLDVEDIHD 185 Query 185 RKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQ 244 RKGL QKILD+MGSTEL ANLFR +QTEEKL++D V + A H+ VG++VR I+ Sbjct 186 RKGLTARQKILDYMGSTELIANLFRISQTEEKLRKDKVKGAEIATKVHYSVGKEVRSAIE 245 Query 245 ELGGTMPEELPTPQVSIKQLE 265 ++GGTMPE+LP P+ SI+Q+E Sbjct 246 KIGGTMPEDLPVPEKSIQQIE 266 >ref|ZP_06290894.1| DNA-damage-inducible protein D [Peptoniphilus lacrimalis 315-B] gb|EFA90356.1| DNA-damage-inducible protein D [Peptoniphilus lacrimalis 315-B] Length=286 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 147/261 (56%), Positives = 192/261 (73%), Gaps = 3/261 (1%) Query 5 HQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 ++ FE+IK + +G+E WSAR+L +L YS++R+F V+ RA ACENSGH + F E+ Sbjct 9 YKKFEDIKYVRKDGSEYWSARELAAVLDYSQWRNFQKVIDRAMIACENSGHEVIYDFAEV 68 Query 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 +V+ G+ +K ++KD L+RYACYL+VQNGDP K VIA GQTYFAIQT RQE+AD F Sbjct 69 SKIVEAGATSK-SIKDYELTRYACYLIVQNGDPRKEVIALGQTYFAIQTYRQEIADH--F 125 Query 125 KQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQ 184 QL ED +RL +R ++K+ N+ LVE A AGV T +FAIFQN GY GLYGGLD IH Sbjct 126 NQLDEDRRRLVIRGDIKQWNQLLVETAHDAGVITNEEFAIFQNAGYMGLYGGLDVGDIHD 185 Query 185 RKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQ 244 RKGL QKILD+MGSTEL ANLFR +QTEEKL++D V + A H+ VG++VR I+ Sbjct 186 RKGLTVRQKILDYMGSTELIANLFRISQTEEKLRKDKVEGAEAATKVHYSVGKEVRSAIE 245 Query 245 ELGGTMPEELPTPQVSIKQLE 265 ++GGTMPE+LP P+ SI+Q+E Sbjct 246 KIGGTMPEDLPVPEKSIQQIE 266 >ref|ZP_06342185.1| DNA-damage-inducible protein D family protein [Bulleidia extructa W1219] gb|EFC05636.1| DNA-damage-inducible protein D family protein [Bulleidia extructa W1219] Length=286 Score = 305 bits (780), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 147/261 (56%), Positives = 193/261 (73%), Gaps = 3/261 (1%) Query 5 HQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 ++ FE+IK I +G+E WSAR+L +L YS++R+F V+ RA ACE+SGH + F E+ Sbjct 9 YRQFEDIKYIRKDGSEYWSARELAAVLDYSQWRNFQKVIDRAMIACESSGHEVTYDFAEV 68 Query 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 +V+ G+ +K ++KD L+RYACYL+VQNGDP K VIA GQTYFAIQT RQE+AD F Sbjct 69 SKIVEAGATSK-SIKDYELTRYACYLIVQNGDPRKEVIALGQTYFAIQTYRQEIADH--F 125 Query 125 KQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQ 184 QL ED +RL +R ++K+ N+ LVE A AGV T +FAIFQN GY GLYGGLD + IH Sbjct 126 NQLDEDRRRLVVRGDIKQWNQLLVETAHDAGVITNEEFAIFQNAGYMGLYGGLDVEDIHD 185 Query 185 RKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQ 244 RKGL QKILD+MGSTEL ANLFR +QTEEKL++D V + A H+ VG++VR I+ Sbjct 186 RKGLTARQKILDYMGSTELIANLFRISQTEEKLRKDKVEGVEAATKVHYSVGKEVRSAIE 245 Query 245 ELGGTMPEELPTPQVSIKQLE 265 ++GGTMPE+LP P+ SI+Q+E Sbjct 246 KIGGTMPEDLPVPEKSIQQIE 266 >ref|ZP_02233204.1| hypothetical protein DORFOR_00036 [Dorea formicigenerans ATCC 27755] gb|EDR48601.1| hypothetical protein DORFOR_00036 [Dorea formicigenerans ATCC 27755] Length=295 Score = 304 bits (779), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 162/258 (62%), Positives = 200/258 (77%), Gaps = 3/258 (1%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 F+ IK N +G E W AR+L L Y+E+R+F V+ RAK +C+NSG+ I DHF E+ + Sbjct 33 FDSIKHENESGEEFWYARELQVALEYTEWRNFSKVIERAKSSCQNSGNPISDHFVEVNKI 92 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 VK G+ K + DI LSRYACYL+VQNGD K VIA GQTYFA++TR+QEL E F L Sbjct 93 VKAGATTK-DIGDIELSRYACYLIVQNGDSRKKVIALGQTYFAVKTRQQELI--ENFDNL 149 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 E++KRL +R E+ HNK L EAA+ AG++ D+AIFQN GY+GLYGGL K IH RKG Sbjct 150 TEEKKRLAIRGEMISHNKSLAEAAKMAGISDPRDYAIFQNKGYKGLYGGLGVKEIHARKG 209 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 LKKNQKILDHMGSTELAANLFRATQT+EKL+RD + K++AN THFDVG+KVRQTI++LG Sbjct 210 LKKNQKILDHMGSTELAANLFRATQTDEKLRRDHIIGKEEANQTHFDVGQKVRQTIKDLG 269 Query 248 GTMPEELPTPQVSIKQLE 265 GTMPE+LPTP+ SIKQ+E Sbjct 270 GTMPEDLPTPKKSIKQIE 287 >ref|ZP_06758308.1| DNA-damage-inducible protein D [Veillonella sp. 6_1_27] gb|EFG24471.1| DNA-damage-inducible protein D [Veillonella sp. 6_1_27] Length=286 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 145/261 (55%), Positives = 192/261 (73%), Gaps = 3/261 (1%) Query 5 HQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 ++ FE IK + +G+E WSAR+L +L YS++R+F V+ RA ACENSGH + F E+ Sbjct 9 YRQFENIKYVRQDGSEYWSARELADVLDYSQWRNFQKVIDRAMIACENSGHEVTYDFAEV 68 Query 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 +V+ G+ ++++KD L+RYACYL+VQNGDP K VIA GQTYFAIQT RQE+AD F Sbjct 69 SKIVEAGAT-RKSIKDYELTRYACYLIVQNGDPRKEVIALGQTYFAIQTYRQEIADH--F 125 Query 125 KQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQ 184 QL ED +RL +R ++K+ N+ LVE A AGV T +FAIFQN GY GLYGGLD + IH Sbjct 126 NQLDEDRRRLVVRGDIKQWNQLLVETAHDAGVITNEEFAIFQNAGYMGLYGGLDVEDIHD 185 Query 185 RKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQ 244 RKGL QKILD+MGSTEL ANLFR +QTEEKL++D + + A H+ VG++VR I+ Sbjct 186 RKGLTARQKILDYMGSTELIANLFRISQTEEKLRKDKIEGAEAATKVHYSVGKEVRSAIE 245 Query 245 ELGGTMPEELPTPQVSIKQLE 265 ++GGTMPE+LP P+ SI+Q+E Sbjct 246 KIGGTMPEDLPVPEKSIQQIE 266 >ref|YP_519165.1| DNA-damage-inducible protein D [Desulfitobacterium hafniense Y51] ref|YP_002460534.1| DNA-damage-inducible protein D [Desulfitobacterium hafniense DCB-2] dbj|BAE84721.1| hypothetical protein [Desulfitobacterium hafniense Y51] gb|ACL22098.1| DNA-damage-inducible protein D [Desulfitobacterium hafniense DCB-2] Length=285 Score = 301 bits (771), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 147/263 (55%), Positives = 188/263 (71%), Gaps = 2/263 (0%) Query 3 EHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFE 62 E ++ FE IK I +G+E W AR+L K+L Y+E+R+F V+ RA AC NSG + DHF Sbjct 7 EEYKSFESIKHIRESGSEFWYARELAKVLDYTEWRNFQKVIDRAILACRNSGFAVSDHFV 66 Query 63 EILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDE 122 E+ M++IG +R D L+RYA YL+VQNGDP K +IA GQTYFAIQTRRQE+ D Sbjct 67 EVNKMIEIGKGGRRKTIDYELTRYAGYLIVQNGDPRKQIIALGQTYFAIQTRRQEVQD-- 124 Query 123 AFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAI 182 AF QL E+ KRL +R +K+ N+ L EAA AGV T +FAIFQN GY GLYGG+ I Sbjct 125 AFNQLDENNKRLVVRGNVKQWNQLLAEAAHNAGVLTDEEFAIFQNAGYMGLYGGMTVSDI 184 Query 183 HQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQT 242 H +K LKKN+KILD+MGSTEL ANLFR +QTEEKLKRD V++ AN TH++V K+R+ Sbjct 185 HTKKDLKKNEKILDYMGSTELIANLFRISQTEEKLKRDEVSTAVDANNTHYEVADKIRKA 244 Query 243 IQELGGTMPEELPTPQVSIKQLE 265 I E+G T+PE+LP P SI+ +E Sbjct 245 IIEMGATLPEDLPVPDKSIQTIE 267 >ref|ZP_04729317.1| DNA-damage-inducible protein D [Neisseria gonorrhoeae PID18] ref|ZP_06135105.1| DNA-damage-inducible protein [Neisseria gonorrhoeae PID18] gb|EEZ49745.1| DNA-damage-inducible protein [Neisseria gonorrhoeae PID18] Length=283 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 155/266 (58%), Positives = 195/266 (73%), Gaps = 0/266 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 M + FE K I+ G E WSAR L ++L YSE+R+F + +A ACE SG+ + H Sbjct 1 MTTENNAFENAKHIDETGNEYWSARTLQQILEYSEWRNFQRAIDKAITACETSGNDKNHH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E M+ +G +R + D LSRYACYL+VQNGDP+K VIAAGQTYFA+Q RRQEL D Sbjct 61 FVETNKMIALGKGGQREVADYRLSRYACYLIVQNGDPSKSVIAAGQTYFAVQARRQELQD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 + AF+ L ED++RL LR +L+EHN L AA+ AGV ++A+FQNHGY+GLYGGL ++ Sbjct 121 EAAFRSLGEDKQRLLLRRQLREHNTDLAAAAKDAGVEKPVEYAVFQNHGYRGLYGGLGKQ 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 IH RKGLKK+Q+ILDHM ++E AANLFRATQTEEKL+R + K QAN HF+VG+KVR Sbjct 181 GIHSRKGLKKSQRILDHMNASEPAANLFRATQTEEKLRRKNIQGKTQANRVHFEVGQKVR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLEN 266 QTI+ELGG MPE P P+ SIKQLEN Sbjct 241 QTIEELGGIMPENQPVPEKSIKQLEN 266 >ref|ZP_01828051.1| DNA-damage-inducible protein [Streptococcus pneumoniae SP14-BS69] ref|ZP_04525333.1| DNA-damage-inducible protein D [Streptococcus pneumoniae CCRI 1974] ref|ZP_04597039.1| DNA-damage-inducible protein D [Streptococcus pneumoniae CCRI 1974M2] gb|EDK65879.1| DNA-damage-inducible protein [Streptococcus pneumoniae SP14-BS69] Length=283 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 146/267 (54%), Positives = 189/267 (70%), Gaps = 6/267 (2%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE IK I+ NG E W AR+L +L Y E+R+F V+ +AK ACENSG + +F ++ Sbjct 11 FENIKHIDENGVEFWYARELQTILEYMEWRNFNQVIDKAKIACENSGKCVVANFVDVNKT 70 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 V++ R + DI LSRYACYL+VQNGDP K VIA GQ+YFAI+TR+QEL DD F QL Sbjct 71 VQLNF-GTREIADIKLSRYACYLIVQNGDPRKEVIALGQSYFAIKTRQQELHDD--FNQL 127 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 ED+KR+ +R+E+K HNK L E+A AGV +F F N GYQGLYGGL+ + IH K Sbjct 128 TEDQKRIAIRDEIKHHNKSLSESAGNAGVK---NFGRFHNSGYQGLYGGLNMQDIHNLKE 184 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 L + + ILD MGS ELAANLFRATQT+E L+R + ++ AN THF+VGR +R T++ELG Sbjct 185 LNEGEHILDFMGSAELAANLFRATQTDEVLRRRNIKGEELANNTHFNVGRTIRNTMKELG 244 Query 248 GTMPEELPTPQVSIKQLENSVKITEKK 274 TMPE LPTP+ SI++L+N K EK+ Sbjct 245 TTMPENLPTPRESIQELKNKQKEFEKQ 271 >gb|EBG28596.1| hypothetical protein GOS_9458616 [marine metagenome] Length=226 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 142/219 (64%), Positives = 178/219 (81%), Gaps = 5/219 (2%) Query 2 NEHHQP----FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTI 57 NE +P FE IK IN NG E WSAR+L K+LGYSEYRHF+PV+++AKEAC NSGH Sbjct 8 NELAKPNKLTFESIKKINKNGQEYWSARELAKVLGYSEYRHFLPVISKAKEACTNSGHRT 67 Query 58 DDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQE 117 DHFE+IL+MV+IGS A+R L+ I LSRYACYL+VQN DP+K ++A GQTYFA+QTR+QE Sbjct 68 SDHFEDILEMVQIGSGAERELESIALSRYACYLIVQNADPSKEIVALGQTYFAVQTRKQE 127 Query 118 LADDEAFKQLR-EDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGG 176 + + + +++L+ E+EKRLFLR E+KEHNK L A++AGV D+AIFQ+HGY+GLYGG Sbjct 128 IIETKKYQELKTEEEKRLFLRKEMKEHNKLLSFTAKEAGVIEPVDYAIFQDHGYKGLYGG 187 Query 177 LDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEE 215 L K IH+RKGLKK ++ILDHMGS ELAANLFRATQTE+ Sbjct 188 LGSKDIHKRKGLKKGEQILDHMGSLELAANLFRATQTED 226 >ref|ZP_08051753.1| DNA-damage-inducible protein D [Streptococcus sp. M334] gb|EFX58982.1| DNA-damage-inducible protein D [Streptococcus sp. M334] Length=283 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 145/267 (54%), Positives = 187/267 (70%), Gaps = 6/267 (2%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE IK I+ NG E W AR+L +L Y E+R+F V+ +AK ACENSG + +F ++ Sbjct 11 FENIKHIDENGVEFWYARELQTILEYMEWRNFNQVIDKAKIACENSGKRVVANFVDVNKT 70 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 V++ R + DI LSRYACYL+VQNGDP K VIA GQ+YFAI+TR+QEL DD F QL Sbjct 71 VQLNF-GTREIADIKLSRYACYLIVQNGDPRKEVIALGQSYFAIKTRQQELHDD--FNQL 127 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 ED+KR+ +R+E+K HNK L E+A AGV +F F N GY+GLYGGL + IH K Sbjct 128 TEDQKRIAIRDEIKHHNKSLSESAGNAGVK---NFGRFHNSGYKGLYGGLTMQDIHNLKE 184 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 L + + ILD MGS ELAANLFRATQT+E L+R + + AN THF+VGR +R T++ELG Sbjct 185 LNEGEHILDFMGSAELAANLFRATQTDEVLRRRNIKGEDLANDTHFNVGRTIRNTMKELG 244 Query 248 GTMPEELPTPQVSIKQLENSVKITEKK 274 TMPE LPTP+ SI++L+N K EK+ Sbjct 245 TTMPENLPTPRESIQELKNKQKELEKQ 271 >ref|ZP_02207310.1| hypothetical protein COPEUT_02120 [Coprococcus eutactus ATCC 27759] gb|EDP25745.1| hypothetical protein COPEUT_02120 [Coprococcus eutactus ATCC 27759] Length=259 Score = 278 bits (710), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 136/241 (56%), Positives = 175/241 (72%), Gaps = 3/241 (1%) Query 25 RQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLS 84 R+LG L Y ++R+F V+ RA ACENSGH + D F E+ +V+ G +K +D LS Sbjct 2 RELGPALDYVQWRNFEKVIKRAMIACENSGHRVSDDFAEVSKIVEAGVTSK-PTRDYELS 60 Query 85 RYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHN 144 RYACYLVVQNGDP K VIA GQTYFAIQT RQE+AD F +L ED +RL +R ++K+ N Sbjct 61 RYACYLVVQNGDPRKEVIALGQTYFAIQTYRQEVADH--FNELDEDNRRLVVRGDIKQWN 118 Query 145 KQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELA 204 + L E A AGV T +FA FQN GY GLYGGLD IH RK L+ QKILD+MGSTEL Sbjct 119 QMLAETAHNAGVITNEEFAFFQNAGYMGLYGGLDVDDIHSRKQLEVGQKILDYMGSTELI 178 Query 205 ANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQL 264 ANLFR +QTEEKL++D + +A + H++VG++VR I+++GGTMPE+LPTP+ SI+Q+ Sbjct 179 ANLFRISQTEEKLRKDKIQGADKATSVHYNVGKEVRTAIEKIGGTMPEDLPTPEKSIQQI 238 Query 265 E 265 E Sbjct 239 E 239 >ref|ZP_06757733.1| DNA-damage-inducible protein D [Veillonella sp. 6_1_27] gb|EFG24848.1| DNA-damage-inducible protein D [Veillonella sp. 6_1_27] Length=281 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 151/260 (58%), Positives = 185/260 (71%), Gaps = 3/260 (1%) Query 2 NEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHF 61 N F+ IK I+ANG E W AR L +L Y+++ +F+ V+ +AK AC+NS +I DHF Sbjct 12 NSTENSFDSIKQIDANGNEFWYARDLQAILEYTKWDNFLNVIEKAKIACQNSELSISDHF 71 Query 62 EEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD 121 ++ MV +G A R ++DIVLSRYACYL+ NGD K VIA QTYFA++T +E+ Sbjct 72 ADVGKMVHVGV-ANREIQDIVLSRYACYLIAMNGDSKKSVIAQAQTYFAVKTHEREM--Q 128 Query 122 EAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKA 181 E F L EDE+RL +R ++KEHN L EAA AGV T DFA F N GYQGLYGGL K Sbjct 129 EQFISLSEDERRLLIRQDIKEHNTALSEAANNAGVETPQDFAKFHNSGYQGLYGGLGNKE 188 Query 182 IHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQ 241 IH+RKGLK +QKILDHMGS ELAANLFR TQTE KL+RD + K+ AN H +VG KVRQ Sbjct 189 IHKRKGLKPSQKILDHMGSEELAANLFRLTQTEGKLRRDNIQGKENANIAHREVGAKVRQ 248 Query 242 TIQELGGTMPEELPTPQVSI 261 TI+ELGGTMPE+LPTP SI Sbjct 249 TIKELGGTMPEDLPTPPKSI 268 >ref|YP_003878207.1| DNA-damage-inducible protein D [Streptococcus pneumoniae 670-6B] gb|ADM90107.1| DNA-damage-inducible protein D [Streptococcus pneumoniae 670-6B] Length=284 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 140/267 (52%), Positives = 185/267 (69%), Gaps = 5/267 (1%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE IK I+ NG E W AR L K L Y+E+R+F+ V+ +AK AC+ + + I +HF ++ Sbjct 11 FENIKHIDENGVEFWYARDLQKTLEYTEWRNFLLVIDKAKIACDTAKNPIVEHFVDVNKS 70 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + G N R +KD L+RYACYL+VQNGDP K VIA GQTYFA++TR+QEL E F L Sbjct 71 IPNGYNTTRDIKDFKLTRYACYLIVQNGDPRKEVIALGQTYFALKTRQQELQ--ENFDNL 128 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 E++KRL +R+E+K HNK L E+A AGV +F F N GY+GLYGGL + IH K Sbjct 129 TEEQKRLAIRDEIKHHNKSLSESAGNAGVK---NFGRFHNSGYKGLYGGLTMQDIHNLKE 185 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 L + + ILD MGS ELAANLFRATQT+E L+R + + AN THF+VGR +R T++ELG Sbjct 186 LNEGEHILDFMGSAELAANLFRATQTDEVLRRRNIKGEDLANDTHFNVGRTIRNTMKELG 245 Query 248 GTMPEELPTPQVSIKQLENSVKITEKK 274 TMPE LP P+ SI++L++ K EK+ Sbjct 246 TTMPENLPAPRESIQELKSKQKELEKQ 272 >ref|ZP_08084347.1| integrase [Prevotella oralis ATCC 33269] gb|EFZ37425.1| integrase [Prevotella oralis ATCC 33269] Length=351 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 127/196 (64%), Positives = 156/196 (79%), Gaps = 1/196 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE+I+ I+ NG E WSAR++ K+L YSEYRHF+PV+ +AKEAC NS + DHFE+IL+M Sbjct 124 FEQIRHIDENGIEYWSAREMAKVLEYSEYRHFLPVIEKAKEACANSNNNPLDHFEDILEM 183 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 V IGS AKR L+ + LSRYACYL+VQN DP K V+A GQTYFA+QTR E+ + + +L Sbjct 184 VSIGSGAKRPLESVKLSRYACYLIVQNADPGKEVVANGQTYFAVQTRIAEIKQMDEYNRL 243 Query 128 -REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 E+EKRLFLRNEL HN QL +AA+ AGV + D+AIFQNHGY+GLYGGLD KAIH RK Sbjct 244 TNEEEKRLFLRNELARHNSQLADAAKNAGVVESRDYAIFQNHGYKGLYGGLDAKAIHARK 303 Query 187 GLKKNQKILDHMGSTE 202 GLKK+QKILDHMGST+ Sbjct 304 GLKKSQKILDHMGSTD 319 >ref|YP_004246315.1| DNA-damage-inducible protein [Spirochaeta sp. Buddy] gb|ADY12121.1| DNA-damage-inducible protein [Spirochaeta sp. Buddy] Length=284 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 136/260 (52%), Positives = 177/260 (68%), Gaps = 3/260 (1%) Query 5 HQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 ++ FE+IK NG E W AR+L +L Y+++R+F V+ +A +C+NSG DHF E Sbjct 9 YKQFEDIKHTTENGIEFWYARELASVLDYTQWRNFTKVIDKAMLSCQNSGFECADHFLEA 68 Query 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 +V+ G+ +K + D LSRYACYL+VQNGDP K IA GQTYFAIQTRRQE+AD F Sbjct 69 RKIVEAGATSK-PINDFELSRYACYLIVQNGDPRKDPIALGQTYFAIQTRRQEIAD--RF 125 Query 125 KQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQ 184 +L ED KRL +R E+ N LVEAA +AG+ ++A FQN GY GLYGGL IH+ Sbjct 126 NELDEDNKRLVIRGEVTSWNTMLVEAAHKAGITDQLEYAQFQNAGYMGLYGGLTAADIHR 185 Query 185 RKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQ 244 RK LK ++KILDHMGS EL ANLFR TQTE KL+R+ + A+ H+ VG+ VR+ I Sbjct 186 RKKLKTSEKILDHMGSEELGANLFRITQTEAKLRREQPQGLETASGMHYQVGQTVREAIA 245 Query 245 ELGGTMPEELPTPQVSIKQL 264 + GTMPE LPTP+ SI ++ Sbjct 246 KNEGTMPENLPTPEKSISEI 265 >gb|EBM11548.1| hypothetical protein GOS_8460688 [marine metagenome] Length=196 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 118/170 (69%), Positives = 141/170 (82%), Gaps = 0/170 (0%) Query 4 HHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEE 63 HHQ FE +K +G E WSAR+L K+L YSEYRHF+PV+ RA+EAC+NSGH I DHFE+ Sbjct 10 HHQTFESLKQEGEDGCEFWSARKLAKVLEYSEYRHFLPVIGRAREACKNSGHNIVDHFED 69 Query 64 ILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEA 123 ILDM+++G +R ++D+ LSRYACYL+VQNGDPAKPVIA GQTYFAIQTRRQELAD+ Sbjct 70 ILDMIEVGKGGQRQVEDVKLSRYACYLIVQNGDPAKPVIANGQTYFAIQTRRQELADNRN 129 Query 124 FKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGL 173 F+QL+ED KRLFLRNEL EHNK LVE AQ+AGV T DFA+FQNHGY+G Sbjct 130 FQQLKEDAKRLFLRNELCEHNKLLVETAQRAGVDTPRDFAVFQNHGYKGF 179 >emb|CBK82707.1| hypothetical protein [Coprococcus sp. ART55/1] Length=234 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 122/212 (57%), Positives = 154/212 (72%), Gaps = 3/212 (1%) Query 49 ACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTY 108 ACENSGH + D F E+ +V+ G +K +D LSRYACYLVVQNGDP K VIA GQTY Sbjct 3 ACENSGHRVSDDFAEVSKIVEAGITSK-PTRDYELSRYACYLVVQNGDPRKEVIALGQTY 61 Query 109 FAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNH 168 FAIQT RQE+AD F +L ED +RL + ++K+ N+ L E A AGV T +FA FQN Sbjct 62 FAIQTYRQEVADH--FNELDEDNRRLVVWGDIKQWNQMLAETAHNAGVITNEEFAFFQNA 119 Query 169 GYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQA 228 GY GLYGGLD IH RK L+ QKILD+MGSTEL ANLFR +QTEEKL++D + +A Sbjct 120 GYMGLYGGLDVDDIHSRKQLEVGQKILDYMGSTELIANLFRISQTEEKLRKDKIQGADKA 179 Query 229 NTTHFDVGRKVRQTIQELGGTMPEELPTPQVS 260 + H++VG++VR I+++GGTMPE+LPTP+ S Sbjct 180 TSVHYNVGKEVRTAIEKIGGTMPEDLPTPEKS 211 >gb|EBO60712.1| hypothetical protein GOS_8051923 [marine metagenome] Length=287 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 132/266 (49%), Positives = 181/266 (68%), Gaps = 11/266 (4%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE+IK I+ NG E W+AR+L L GYS ++ F V+ RA ++ N+G I++HF + + Sbjct 16 FEDIKHIDENGIEFWTARELLPLFGYSSWQAFDEVIVRATKSAFNAGQIIENHFSHLTKL 75 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 V IGS +KRA+KD L RYACYLV QNGD IA QTYFA+QTR+QE+ D+ L Sbjct 76 VDIGSGSKRAIKDWKLDRYACYLVAQNGDSKITQIALAQTYFAVQTRKQEIFDN-----L 130 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 + EKRLF+R E+ NK+L + A+QAGV ++F +F + GY+GLYG + + KG Sbjct 131 PDTEKRLFIRGEVSSENKKLFKTAKQAGV---SNFGLFNDAGYRGLYGS-SLSDVEKIKG 186 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 +KK + +LD GSTELAANLFR TQT+EKLK+D V + +A THF VG KVRQTI+++G Sbjct 187 IKKGE-LLDRAGSTELAANLFRITQTDEKLKKDNVRNDYEARRTHFMVGGKVRQTIKDIG 245 Query 248 GTMPEELPTPQVSIKQLENSVKITEK 273 G +PE L P+ IK+++ +K EK Sbjct 246 GNLPENLK-PEKHIKEIKKEIKQLEK 270 >ref|ZP_07153957.1| conserved hypothetical protein [Escherichia coli MS 21-1] gb|EFK19283.1| conserved hypothetical protein [Escherichia coli MS 21-1] Length=159 Score = 234 bits (598), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 113/155 (72%), Positives = 124/155 (80%), Gaps = 0/155 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIA GQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAVGQTYFAIQTRRQELAD 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAG 155 DEAF+QLREDEKRLFLRNELKEHNKQLVEAAQQ G Sbjct 125 DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQLG 159 >gb|EFZ46682.1| DNA-damage-inducible protein D [Escherichia coli E128010] Length=152 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 113/152 (74%), Positives = 123/152 (80%), Gaps = 0/152 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 1 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 60 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 61 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQ 152 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQ Sbjct 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQ 152 >ref|ZP_05974406.2| DNA-damage-inducible protein D [Providencia rustigianii DSM 4541] gb|EFB70697.1| DNA-damage-inducible protein D [Providencia rustigianii DSM 4541] Length=143 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 110/134 (82%), Positives = 119/134 (88%), Gaps = 0/134 (0%) Query 125 KQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQ 184 K+LREDEKRLFL NELKEHNKQLVE AQQAGV T DFAIFQNHGY+GLYGGLDQK IHQ Sbjct 5 KKLREDEKRLFLHNELKEHNKQLVETAQQAGVETNIDFAIFQNHGYKGLYGGLDQKGIHQ 64 Query 185 RKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQ 244 KGLKK+QKILDHMGSTELAANLFR+TQ EEKL+RD V SK AN THFDVG KVR TI+ Sbjct 65 HKGLKKSQKILDHMGSTELAANLFRSTQAEEKLRRDNVQSKTHANQTHFDVGSKVRDTIR 124 Query 245 ELGGTMPEELPTPQ 258 ELGGTMPE+LP+P+ Sbjct 125 ELGGTMPEDLPSPE 138 >ref|YP_112573.1| DNA-damage-inducible protein D [Methylococcus capsulatus str. Bath] gb|AAU90849.1| DNA-damage-inducible protein D [Methylococcus capsulatus str. Bath] Length=295 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 132/262 (50%), Positives = 171/262 (65%), Gaps = 7/262 (2%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE++K NA+GAE WSAR+L LLGYS++R F + RA +C+ SG++ + HF Sbjct 14 FEDLKQTNAHGAEYWSARELQPLLGYSQWRRFEQAIERAITSCKESGNSPEHHFAGAGKP 73 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + G A + + D LSR+ACYL+ QNGDP KP IA Q YFAIQTRRQEL+D Q Sbjct 74 ITGGKGAVQVVDDYHLSRFACYLIAQNGDPRKPEIAQAQKYFAIQTRRQELSD-----QA 128 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 D +RL LR + E K L AAQQAGV + F +F + GY+GLYGGL + AI QRK Sbjct 129 AADLERLELRKQTAEEFKALSGAAQQAGVQSKM-FGVFHDAGYKGLYGGLGRDAIKQRKA 187 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 + +LD M +TELAAN FR TQT +KL RDGV S+ QA TH VGR+VR IQ +G Sbjct 188 IPDKDNLLDRMNATELAANQFRMTQTRDKLARDGVRSQAQAIQTHEQVGREVRAAIQRIG 247 Query 248 GTMPEELPTPQVSIKQLENSVK 269 GT+PE++P + IK++E +K Sbjct 248 GTLPEDIPAAE-HIKEVEKRLK 268 >gb|EBG73089.1| hypothetical protein GOS_9383852 [marine metagenome] Length=157 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 95/150 (63%), Positives = 113/150 (75%), Gaps = 0/150 (0%) Query 2 NEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHF 61 N+HH FEE+K E W AR L LGYS + F VLT+AK AC+NSG +DDHF Sbjct 8 NKHHITFEELKHSTEEKLEFWFARDLQNALGYSSWDKFQRVLTKAKTACQNSGQLVDDHF 67 Query 62 EEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD 121 +++ MV IGS ++R + D LSRYACYL+VQNGD KP+IA GQTYFAIQTRRQEL DD Sbjct 68 SQVVKMVDIGSGSQRNISDFELSRYACYLIVQNGDSGKPIIANGQTYFAIQTRRQELTDD 127 Query 122 EAFKQLREDEKRLFLRNELKEHNKQLVEAA 151 +F++L+EDEKRLFLRNELKEHNKQLVE A Sbjct 128 SSFQKLKEDEKRLFLRNELKEHNKQLVEVA 157 >ref|ZP_05629838.1| DNA-damage-inducible protein D [Actinobacillus minor 202] gb|EEV25170.1| DNA-damage-inducible protein D [Actinobacillus minor 202] Length=122 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 89/112 (79%), Positives = 99/112 (88%), Gaps = 0/112 (0%) Query 158 TATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKL 217 T T +IFQNHGY+GLYGGLD KAIH RKGL+KN+KILDHMGSTELAANLFRATQTEEKL Sbjct 5 TQTFESIFQNHGYKGLYGGLDNKAIHARKGLQKNEKILDHMGSTELAANLFRATQTEEKL 64 Query 218 KRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVK 269 +RD + +KQ+AN THFDVG+KVRQTIQELGGTMPE+LPTP SIK LEN K Sbjct 65 RRDNIQTKQEANQTHFDVGKKVRQTIQELGGTMPEDLPTPDKSIKTLENHQK 116 >gb|EGB35802.1| dinD protein [Escherichia coli E482] Length=129 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 85/125 (68%), Positives = 96/125 (76%), Gaps = 0/125 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F E MV +GS A+R L+D+ LSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct 65 FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query 121 DEAFK 125 DEAF+ Sbjct 125 DEAFR 129 >ref|ZP_08185680.1| hypothetical protein XGA_4740 [Xanthomonas gardneri ATCC 19865] gb|EGD16706.1| hypothetical protein XGA_4740 [Xanthomonas gardneri ATCC 19865] Length=284 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 93/146 (63%), Positives = 115/146 (78%), Gaps = 0/146 (0%) Query 124 FKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIH 183 F L E+++RLFLR+++ +HNK L AA+QAGV T ++A+FQ+HGY+GLYGGL K IH Sbjct 129 FDALSENQRRLFLRDQMSQHNKDLAAAAKQAGVETPLEYAVFQDHGYKGLYGGLGAKDIH 188 Query 184 QRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTI 243 RK LKK+Q ILDHMGSTELAANLFRATQ EEKL+RD V K AN TH +VG+ VR+TI Sbjct 189 ARKALKKSQTILDHMGSTELAANLFRATQAEEKLRRDNVQGKTAANRTHLEVGQTVRKTI 248 Query 244 QELGGTMPEELPTPQVSIKQLENSVK 269 QELGGT+PE LP P+ SIK+L+ K Sbjct 249 QELGGTLPENLPAPETSIKRLQKDAK 274 >ref|NP_638251.1| DNA-damage-inducible protein d [Xanthomonas campestris pv. campestris str. ATCC 33913] ref|YP_242295.1| DNA-damage-inducible protein d [Xanthomonas campestris pv. campestris str. 8004] gb|AAM42175.1| DNA-damage-inducible protein d [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAY48275.1| DNA-damage-inducible protein d [Xanthomonas campestris pv. campestris str. 8004] Length=286 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 92/146 (63%), Positives = 115/146 (78%), Gaps = 0/146 (0%) Query 124 FKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIH 183 F L E+++RLFLR+++ +HNK L AA+QAGV T ++A+FQ+HGY+GLYGGL K IH Sbjct 131 FDALSENQRRLFLRDQMSQHNKDLAAAAKQAGVETPLEYAVFQDHGYKGLYGGLGAKDIH 190 Query 184 QRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTI 243 RK LKK+Q ILDHMGSTELAANLFRATQ EEKL+RD V K AN TH +VG+ VR+TI Sbjct 191 ARKALKKSQTILDHMGSTELAANLFRATQAEEKLRRDNVQGKTAANRTHLEVGQTVRKTI 250 Query 244 QELGGTMPEELPTPQVSIKQLENSVK 269 QELGGT+PE LP P+ SIK+L+ + Sbjct 251 QELGGTLPENLPAPETSIKRLQKDAR 276 >gb|EBS71547.1| hypothetical protein GOS_7392226 [marine metagenome] Length=154 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 85/144 (59%), Positives = 102/144 (70%), Gaps = 1/144 (0%) Query 5 HQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 H FE +K + G E W AR+L +L YS + F V+ +A ACE SG + +DHF ++ Sbjct 11 HTSFESLKH-ESEGNEFWYARELQTVLDYSTWDKFERVIKKAITACEGSGQSSEDHFSQV 69 Query 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 MV IGS AKR +D LSRYACYL+VQNGD +KPVIA GQTYFAIQTRRQEL DD F Sbjct 70 GKMVDIGSGAKRTTRDYQLSRYACYLIVQNGDASKPVIANGQTYFAIQTRRQELQDDTGF 129 Query 125 KQLREDEKRLFLRNELKEHNKQLV 148 +QL ED+KRL LRNEL +HNKQL Sbjct 130 QQLNEDQKRLMLRNELADHNKQLA 153 >ref|YP_001902656.1| putative DNA-related protein [Xanthomonas campestris pv. campestris str. B100] emb|CAP50600.1| putative DNA-related protein [Xanthomonas campestris pv. campestris] Length=284 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 92/146 (63%), Positives = 114/146 (78%), Gaps = 0/146 (0%) Query 124 FKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIH 183 F L E+++RLFLR+++ +HNK L AA+QAGV T ++A+FQ+HGY+GLYGGL K IH Sbjct 129 FDALSENQRRLFLRDQMSQHNKDLAAAAKQAGVETPLEYAVFQDHGYKGLYGGLGAKDIH 188 Query 184 QRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTI 243 RK LKK+Q ILDHMGSTELAANLFRATQ EEKL+RD V K AN TH +VG+ VR+TI Sbjct 189 ARKALKKSQTILDHMGSTELAANLFRATQAEEKLRRDNVQGKTAANRTHLEVGQTVRKTI 248 Query 244 QELGGTMPEELPTPQVSIKQLENSVK 269 QELGGT+PE L P+ SIK+L+ K Sbjct 249 QELGGTLPENLHAPETSIKRLQKDAK 274 >ref|ZP_04840978.1| DNA-damage-inducible protein D [Bacteroides sp. 3_2_5] gb|EES87579.1| DNA-damage-inducible protein D [Bacteroides sp. 3_2_5] Length=293 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 106/279 (37%), Positives = 152/279 (54%), Gaps = 13/279 (4%) Query 1 MNEHHQPFEEI--KLINANGA---EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGH 55 +N+H Q F++I + + NGA E W AR+L +LGY+ + +F LTRA E+C+ Sbjct 6 INKHKQSFDDICHYIEDDNGADKVEVWFARELQIILGYARWENFQVALTRAVESCKTQNI 65 Query 56 TIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRR 115 IDDHF E+ MV +GS AKR ++D +L+RYACYLV QNGDP K IA Q YFA+QTRR Sbjct 66 NIDDHFREVTKMVTLGSGAKREIQDFMLTRYACYLVAQNGDPKKEEIAFAQGYFAVQTRR 125 Query 116 QELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYG 175 EL E +QL RL R+ L+ KQL + GV F ++ G L+G Sbjct 126 AELI-AEHIEQL----SRLETRDRLRSSEKQLSRNIYERGVDDKG-FGRIRSKGDGVLFG 179 Query 176 GLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDV 235 G + + R G+K + + D + + +AA T +++ + + T H D Sbjct 180 GHTTEDMKNRLGIKSTRPLADFLPTLTIAAKNLATEMTNYNVEQKDLYGEHSITTEHMDN 239 Query 236 GRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 R +RQ + + G PEELP + IK++E V EKK Sbjct 240 NRSIRQMLGQR-GIRPEELPAAE-DIKKVERRVASNEKK 276 >emb|CBK68626.1| hypothetical protein [Bacteroides xylanisolvens XB1A] Length=293 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 106/279 (37%), Positives = 152/279 (54%), Gaps = 13/279 (4%) Query 1 MNEHHQPFEEI--KLINANGA---EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGH 55 +N+H Q F++I + + NGA E W AR+L +LGY+ + +F LTRA E+C+ Sbjct 6 INKHKQSFDDICHYIEDDNGADKVEVWFARELQIILGYARWENFQVALTRAVESCKTQNI 65 Query 56 TIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRR 115 IDDHF E+ MV +GS AKR ++D +L+RYACYLV QNGDP K IA Q YFA+QTRR Sbjct 66 NIDDHFREVTKMVTLGSGAKREIQDFMLTRYACYLVAQNGDPKKEEIAFAQGYFAVQTRR 125 Query 116 QELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYG 175 EL E +QL RL R+ L+ KQL + GV F ++ G L+G Sbjct 126 AELI-AEHIEQL----SRLETRDRLRSSEKQLSRNIYERGVDDKG-FGRIRSKGDGVLFG 179 Query 176 GLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDV 235 G + + R G+K + + D + + +AA T +++ + + T H D Sbjct 180 GHTTEDMKNRLGIKSTRPLADFLPTLTIAAKNLATEMTNYNVEQKDLYGEHSITTEHMDN 239 Query 236 GRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 R +RQ + + G PEELP + IK++E V EKK Sbjct 240 NRSIRQMLGQR-GIRPEELPAAE-DIKKVERRVASNEKK 276 >emb|CBW21722.1| putative DNA-damage-inducible protein d [Bacteroides fragilis 638R] Length=307 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 106/279 (37%), Positives = 152/279 (54%), Gaps = 13/279 (4%) Query 1 MNEHHQPFEEI--KLINANGA---EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGH 55 +N+H Q F++I + + NGA E W AR+L +LGY+ + +F LTRA E+C+ Sbjct 20 INKHKQSFDDICHYIEDDNGADKVEVWFARELQIILGYARWENFQVALTRAVESCKTQNI 79 Query 56 TIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRR 115 IDDHF E+ MV +GS AKR ++D +L+RYACYLV QNGDP K IA Q YFA+QTRR Sbjct 80 NIDDHFREVTKMVTLGSGAKREIQDFMLTRYACYLVAQNGDPKKEEIAFAQGYFAVQTRR 139 Query 116 QELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYG 175 EL E +QL RL R+ L+ KQL + GV F ++ G L+G Sbjct 140 AELI-AEHIEQL----SRLETRDRLRSSEKQLSRNIYERGVDDKG-FGRIRSKGDGVLFG 193 Query 176 GLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDV 235 G + + R G+K + + D + + +AA T +++ + + T H D Sbjct 194 GHTTEDMKNRLGIKSTRPLADFLPTLTIAAKNLATEMTNYNVEQKDLYGEHSITTEHMDN 253 Query 236 GRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 R +RQ + + G PEELP + IK++E V EKK Sbjct 254 NRSIRQMLGQ-RGIRPEELPAAE-DIKKVERRVASNEKK 290 >ref|ZP_06089132.1| DNA-damage-inducible protein D [Bacteroides sp. 3_1_33FAA] gb|EEZ21015.1| DNA-damage-inducible protein D [Bacteroides sp. 3_1_33FAA] Length=266 Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 97/248 (39%), Positives = 144/248 (58%), Gaps = 17/248 (6%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE+ K N NG W A ++ +LGY++ + F VL RA +A + H+E I+ + Sbjct 12 FEDFK--NQNGIVYWWASEVMVMLGYNDMKAFCKVLDRATKAFVSLNIP---HYENIIAV 66 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + +N +D L+R+ACYL NGDP KP +A Q YFA QTR+ EL + + Sbjct 67 KR--NNNGVEFQDFKLTRFACYLAAMNGDPKKPEVALAQAYFAQQTRKFEL-----YIEN 119 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 ++ R+ +R EL + NK L A+ A V TD+A FQN GY G+Y ++ + +++G Sbjct 120 NQEIDRVLIREELADGNKSLASTAKAANV---TDYAKFQNAGYLGMYN-MESWKLEKKRG 175 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 +KK K+ D M TELAANLFR TQTEE +K ++ + TH+ VGR+VR +++ Sbjct 176 VKKG-KLFDRMSRTELAANLFRVTQTEELIKSKQISGQANLEQTHYTVGRQVRNIVEQNT 234 Query 248 GTMPEELP 255 G PE+LP Sbjct 235 GRKPEQLP 242 >ref|ZP_06268822.1| DNA-damage-inducible protein D family protein [Prevotella bivia JCVIHMP010] gb|EFB92736.1| DNA-damage-inducible protein D family protein [Prevotella bivia JCVIHMP010] Length=277 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 97/258 (37%), Positives = 148/258 (57%), Gaps = 10/258 (3%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE++ + N E WSAR L LLGY +++F V+ +AKEAC N G ++DHF ++ M Sbjct 13 FEQVSCV-LNDVECWSARDLCSLLGYKLWQNFTKVIDKAKEACVNVGQNVEDHFIDVNKM 71 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 V IGS A+R + DI+L+RYACYLV QNGDP KP IA QTYFA+QTRR EL + ++L Sbjct 72 VVIGSGAERQIDDIMLTRYACYLVAQNGDPRKPQIAFAQTYFAVQTRRAELIE----QRL 127 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 E E R+ R +L+E ++L + GV + FA+ ++ G Q L+ L+ + R G Sbjct 128 IEVE-RVKARAKLQETERKLSGVLYERGVNDKS-FAVIRSKGDQALF-RLNTATLKLRMG 184 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 + + + + D + + + A F A T ++ + + Q + H VR + + Sbjct 185 IPEKRPLADFLPTISIKAKDFAAEMTSVNVQAKDLRGEPQISNEHIANNTAVRDMLVQ-R 243 Query 248 GTMPEELPTPQVSIKQLE 265 G +PE LP P +K++E Sbjct 244 GIVPENLP-PAEDVKKVE 260 >ref|YP_379822.1| DNA-damage-inducible protein D [Chlorobium chlorochromatii CaD3] gb|ABB28779.1| DNA-damage-inducible protein D [Chlorobium chlorochromatii CaD3] Length=287 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 90/256 (35%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query 19 AEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRAL 78 E W AR L + LGY+ + +F+ + RA E+CE +G+ +DDHF + M+ IG +R + Sbjct 25 VEFWFARDLMEPLGYTRWENFMTAIKRALESCETTGYAVDDHFRGVTKMIGIGKGGQRPV 84 Query 79 KDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRN 138 +D +L+RYACYL+ QNGDP K IA Q+YFAI TR+QEL +D Q R D R Sbjct 85 EDFMLTRYACYLIAQNGDPRKEAIAFAQSYFAILTRKQELLEDRMRLQARLDA-----RE 139 Query 139 ELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHM 198 L+E K L + + GV A F ++ G L+GG +A+ +R G+ + + + D + Sbjct 140 RLRESEKTLSQNIYERGVDDA-GFGRIRSKGDAALFGGHTTQAMKERYGITQTRPLADFL 198 Query 199 GSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQ 258 + +AA T + +D ++ + H + VR + + G PE+LP P+ Sbjct 199 PTLTIAAKNLATEMTNHNVSQDDLHGEHAITREHVQNNQSVRTMLSQR-GIKPEQLP-PE 256 Query 259 VSIKQLENSVKITEKK 274 IK+LE +K EK+ Sbjct 257 EDIKKLERRIKTEEKQ 272 >ref|ZP_08171245.1| DNA-damage-inducible protein D family protein [Prevotella denticola CRIS 18C-A] gb|EGC87391.1| DNA-damage-inducible protein D family protein [Prevotella denticola CRIS 18C-A] Length=282 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 97/274 (35%), Positives = 158/274 (57%), Gaps = 10/274 (3%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 + E + FE + + G E WSAR+L LLGYS++ +F V+ +A+ ACEN+G + DH Sbjct 6 IQELYNGFEAVA-VEVEGIECWSARELQLLLGYSKWENFSKVIDKARIACENAGSLVSDH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F ++ MV +GS ++R + DI+L+RYACYL+ QNGDP K IA QTYFA+QTR+ EL + Sbjct 65 FPDVRKMVNLGSGSEREIDDILLTRYACYLIAQNGDPRKEQIAFAQTYFAMQTRKAELIE 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 ++L E E R+ R +L+E K L + GV + FA+ ++ G Q L+ L Sbjct 125 ----QRLLEIE-RVKARTKLQETEKHLSGILYERGV-DSKGFAVIRSKGDQALF-RLSTA 177 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 + ++ G+ ++ + D + + + A F A T +++ + + Q + H + + VR Sbjct 178 QMKKKMGVPASRPVADFLPTISIKAKDFAAEMTNVNVQQKDLYGEGQISNEHIENNKAVR 237 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 Q + + G +PE LP P +K++E + EKK Sbjct 238 QMMIQ-RGIIPENLP-PAEDVKKVERRLVSEEKK 269 >ref|YP_003808488.1| DNA-damage-inducible protein D [Desulfarculus baarsii DSM 2075] gb|ADK85894.1| DNA-damage-inducible protein D [Desulfarculus baarsii DSM 2075] Length=285 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 92/261 (35%), Positives = 141/261 (54%), Gaps = 8/261 (3%) Query 14 INANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSN 73 I G E W AR L + LGY+ + +F+ + RA E+CE +G+ DDHF + M++IG Sbjct 20 IPDEGIEFWFARDLMEPLGYARWENFLTAIKRAIESCETTGYKADDHFRGVTKMIEIGKG 79 Query 74 AKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKR 133 +R ++D +L+RYACYL+ QNGDP K IA Q+YFAIQTR+QEL +D Q R D Sbjct 80 GQRPVEDFMLTRYACYLIAQNGDPRKEPIAFAQSYFAIQTRKQELIEDRMRLQARLD--- 136 Query 134 LFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQK 193 R L+E K L + + GV A F ++ G L+GG + + R G+ K + Sbjct 137 --ARERLRESEKTLSQNIYERGVDDAG-FGRIRSKGDAALFGGHTTQVMKDRYGITKTRP 193 Query 194 ILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEE 253 + D + + +AA T ++++ + + + H VR + + G PE+ Sbjct 194 LADFLPTLTIAAKNLATEMTNHNVQQEDLRGEHAITSEHVQNNVSVRDMLGQR-GIKPEK 252 Query 254 LPTPQVSIKQLENSVKITEKK 274 LP P+ IK+LE V+ EK+ Sbjct 253 LP-PEEDIKKLERRVRSDEKR 272 >ref|ZP_02419265.1| hypothetical protein ANACAC_01851 [Anaerostipes caccae DSM 14662] gb|EDR98227.1| hypothetical protein ANACAC_01851 [Anaerostipes caccae DSM 14662] Length=290 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 96/255 (37%), Positives = 141/255 (55%), Gaps = 8/255 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +LLGY + +F ++RA E+C S I DHF E+ MV++GS AKR++K Sbjct 26 EFWYARELMQLLGYERWENFDKAVSRAMESCATSDIKISDHFREVTKMVELGSGAKRSIK 85 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+QEL ++ L E R R Sbjct 86 DYMLTRYACYLIAQNGDPKKEEIAFAQSYFAVQTRKQELIEERI--ALIE---RTEARGR 140 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMG 199 L+E K+L + + GV A F ++ G + L+GG + + +R G+K N+ + D + Sbjct 141 LRESEKRLSQNIYERGVDDAG-FGRIRSKGDKALFGGYSTQEMKKRLGVKDNRPLADFLP 199 Query 200 STELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQV 259 + +AA T ++ + + H VR +++ G PE LP P Sbjct 200 TLTIAAKNLATEMTNYNVEEKDLQGEVSITGEHIQNNHSVRDMLEQR-GIKPESLP-PSE 257 Query 260 SIKQLENSVKITEKK 274 IK+LE VK EKK Sbjct 258 DIKKLERRVKSQEKK 272 >ref|YP_003756022.1| DNA-damage-inducible protein D [Hyphomicrobium denitrificans ATCC 51888] gb|ADJ23701.1| DNA-damage-inducible protein D [Hyphomicrobium denitrificans ATCC 51888] Length=291 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/247 (37%), Positives = 132/247 (53%), Gaps = 6/247 (2%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 E+ K I+ G W AR++ ++GY +R+F L RAKEA D HF E M Sbjct 18 LEQAKRISPKGVPYWLAREIMPIMGYQSWRNFEKTLGRAKEAFGAIHEDADKHFVETDTM 77 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + IG A+R+ KD LSR A YL+ NGDPAKP IAA Q YFA+QTRR E+ D Sbjct 78 LLIGGGAERSGKDYFLSRPAAYLIAMNGDPAKPEIAAAQAYFAVQTRRMEIEDART---- 133 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 +DEKRL R + K++ A++AGVA T F + YQG+Y A+ + KG Sbjct 134 -KDEKRLEGREKATVAFKKVSSVAKKAGVAN-THQPFFHDARYQGIYRATSAAAVREAKG 191 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 + ++ G+ EL+ + F+ + + R+G+ + A + DV R VR TI G Sbjct 192 IPDGANPFNYFGALELSMHEFQMNLAADVIAREGIKDETTAIQRNLDVARHVRSTIDAAG 251 Query 248 GTMPEEL 254 GT P ++ Sbjct 252 GTDPMKI 258 >ref|ZP_05349036.3| DNA-damage-inducible protein D [Bryantella formatexigens DSM 14469] gb|EET58167.1| DNA-damage-inducible protein D [Bryantella formatexigens DSM 14469] Length=283 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 98/267 (36%), Positives = 154/267 (57%), Gaps = 9/267 (3%) Query 8 FEEIKLINANGA-EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 F+++ I+ +GA E W AR+L LLGYS + +F V+ +A +CEN+G ++DHF + Sbjct 20 FDDVIHISEDGAIEFWYARELQPLLGYSRWENFELVIKKAMISCENAGGNVNDHFRGVTK 79 Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 M+K+ NA+R +K+ VL+RYACYL+ QNGD K IA Q+YFA+QTR+QEL +D + Sbjct 80 MIKLAKNAERGIKEYVLTRYACYLIAQNGDVRKDEIAFAQSYFAVQTRKQELIED----R 135 Query 127 LREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 +R E RL R +L+E K+L + + GV A F ++ G Q L+GG K + +R Sbjct 136 IRLIE-RLNAREKLRESEKRLSQNIYERGVDDAG-FGRIRSKGDQALFGGFTTKDMKERL 193 Query 187 GLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQEL 246 +K+N+ + D + + +AA T +++ + + H VR+ + + Sbjct 194 KVKENRPLADFLPTLTIAAKNLATEMTNYNVEQKELYGEAPITDEHVQNNSSVREMLGQ- 252 Query 247 GGTMPEELPTPQVSIKQLENSVKITEK 273 G PE+LP P +K+LE VK EK Sbjct 253 RGIKPEDLP-PAEDLKKLERRVKRDEK 278 >ref|ZP_07782200.1| DNA-damage-inducible D domain protein [Escherichia coli 2362-75] gb|EFR15157.1| DNA-damage-inducible D domain protein [Escherichia coli 2362-75] Length=84 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 73/75 (97%), Positives = 74/75 (98%), Gaps = 0/75 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEAC NSGHTIDDH Sbjct 5 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACLNSGHTIDDH 64 Query 61 FEEILDMVKIGSNAK 75 FEEILDM+KIGSNAK Sbjct 65 FEEILDMIKIGSNAK 79 >ref|ZP_07932939.1| hypothetical protein HMPREF1011_03290 [Anaerostipes sp. 3_2_56FAA] gb|EFV20965.1| hypothetical protein HMPREF1011_03290 [Anaerostipes sp. 3_2_56FAA] Length=276 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 96/255 (37%), Positives = 141/255 (55%), Gaps = 8/255 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +LLGY + +F ++RA E+C S I DHF E+ MV++GS AKR++K Sbjct 12 EFWYARELMQLLGYERWENFDKAVSRAMESCATSDIKISDHFREVTKMVELGSGAKRSIK 71 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+QEL ++ L E R R Sbjct 72 DYMLTRYACYLIAQNGDPKKEEIAFAQSYFAVQTRKQELIEERI--ALIE---RTEARGR 126 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMG 199 L+E K+L + + GV A F ++ G + L+GG + + +R G+K N+ + D + Sbjct 127 LRESEKRLSQNIYERGVDDAG-FGRIRSKGDKALFGGYSTQEMKKRLGVKDNRPLADFLP 185 Query 200 STELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQV 259 + +AA T ++ + + H VR +++ G PE LP P Sbjct 186 TLTIAAKNLATEMTNYNVEEKVLQGEVSITGEHIQNNHSVRDMLEQR-GIKPESLP-PSE 243 Query 260 SIKQLENSVKITEKK 274 IK+LE VK EKK Sbjct 244 DIKKLERRVKSQEKK 258 >ref|ZP_01287964.1| DNA-damage-inducible protein D [delta proteobacterium MLMS-1] gb|EAT05623.1| DNA-damage-inducible protein D [delta proteobacterium MLMS-1] Length=287 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 92/257 (35%), Positives = 142/257 (55%), Gaps = 8/257 (3%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E W AR++ + LGY+++ F + RA +CE +G+ ++HF + MV++GS A+RA Sbjct 24 GVEFWFAREIQEPLGYAKWERFKDTIQRAITSCETTGYDPNNHFRGVTKMVRLGSGAERA 83 Query 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 + D +L+RYACYL+ QNGDP K IA Q+YFAIQTR+QEL +D Q R D R Sbjct 84 IDDFMLTRYACYLIAQNGDPRKEPIAFAQSYFAIQTRKQELIEDRMRLQARLD-----AR 138 Query 138 NELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDH 197 L+E K L + + GV A F ++ G L+GG + + R G+ K + + D Sbjct 139 ERLRESEKTLSQNIYERGVDDAG-FGRIRSKGDAALFGGHTTQIMKDRFGITKTRPLADF 197 Query 198 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTP 257 + + +AA T ++++ + +Q + H VR + + G PE+LP P Sbjct 198 LPTLTIAAKNLATEMTNHNVRQEDLRGEQAITSEHVQNNVSVRDMLGQR-GIKPEKLP-P 255 Query 258 QVSIKQLENSVKITEKK 274 + I++LE VK EKK Sbjct 256 EEDIRKLERRVKAEEKK 272 >emb|CBL34274.1| hypothetical protein ES1_12750 [Eubacterium siraeum V10Sc8a] Length=293 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 98/260 (37%), Positives = 143/260 (55%), Gaps = 9/260 (3%) Query 15 NANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNA 74 NAN E W AR+L LLGY + +F ++RA ++CE+ G + DHF E+ MV +GS + Sbjct 22 NAN-IEFWYARELMSLLGYERWNNFDKAISRAMDSCESGGIEVSDHFREVAKMVPLGSGS 80 Query 75 KRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRL 134 +R +KD +L+RYACYL+ QNGDP K IA Q+YFA+QTR+QEL ++ L E R Sbjct 81 QREIKDYMLTRYACYLIAQNGDPKKEEIAFAQSYFAVQTRKQELIEERI--ALIE---RT 135 Query 135 FLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKI 194 R L+E K+L + + GV A F ++ G Q L+GG + + R G+K N+ + Sbjct 136 EARGRLRESEKRLSQNIYERGVDDAG-FGRIRSKGDQALFGGHTTQEMKTRLGVKDNRPL 194 Query 195 LDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEEL 254 D + + +AA T ++ + + H VR+ + + G PEEL Sbjct 195 ADFLPTLTIAAKNLATEMTNYNVEEKDLKGECAITGEHVQNNLSVREMLGQR-GIKPEEL 253 Query 255 PTPQVSIKQLENSVKITEKK 274 P P IK+LE VK EKK Sbjct 254 P-PSEDIKKLERRVKSQEKK 272 >ref|ZP_08320067.1| DNA-damage-inducible protein D family protein [Paraprevotella xylaniphila YIT 11841] ref|ZP_08448362.1| DNA-damage-inducible protein D family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gb|EGG55272.1| DNA-damage-inducible protein D family protein [Paraprevotella xylaniphila YIT 11841] gb|EGJ54247.1| DNA-damage-inducible protein D family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length=277 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 90/257 (35%), Positives = 147/257 (57%), Gaps = 9/257 (3%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E WSAR+L KLLGY+++R+F ++ +AK ACE++ + HF E+ MV +GS ++R Sbjct 22 GVECWSARELAKLLGYAQWRNFENIVNKAKAACEHAEQEVSYHFAEVGKMVSLGSGSERE 81 Query 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 + D +L+RYACYLV QNGDP KP +A Q YFA+QTRR EL D +R+ R Sbjct 82 VSDYMLTRYACYLVAQNGDPRKPQVAFAQNYFAVQTRRAELVQQRIL-----DYERIQAR 136 Query 138 NELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDH 197 +L E K+L + GV + FA+ ++ G + L+ +D + ++ G +++ + D Sbjct 137 TKLAETEKRLSGILYERGV-DSKGFALIRSKGDKALF-RIDTALLKRKLGAPESRPLADF 194 Query 198 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTP 257 + + + A F A T +++ + +Q+ H D VR + + G +PE+LP P Sbjct 195 LPTISIKAKDFAAEMTSVNVQQKDLYGQQEIGKEHVDNNAAVRDMLLQ-RGIVPEQLP-P 252 Query 258 QVSIKQLENSVKITEKK 274 +K++E +K EK+ Sbjct 253 GEDVKKVERRLKSEEKR 269 >ref|ZP_07739237.1| DNA-damage-inducible protein D [Aminomonas paucivorans DSM 12260] gb|EFQ23126.1| DNA-damage-inducible protein D [Aminomonas paucivorans DSM 12260] Length=286 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 92/263 (34%), Positives = 140/263 (53%), Gaps = 8/263 (3%) Query 12 KLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIG 71 + I G E W AR L + LGY + +F+ + RA E+C +G+ DDHF + M++IG Sbjct 18 RAIPDEGIEFWFARDLMEPLGYVRWENFLTAINRAIESCVTTGYKADDHFRGVTKMIEIG 77 Query 72 SNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDE 131 +R ++D +L+RYACYL+ QNGDP K IA Q+YFA+QTRRQEL +D Q R D Sbjct 78 RGGQRPVEDFMLTRYACYLIAQNGDPRKEPIAFAQSYFAMQTRRQELIEDRMRLQARLD- 136 Query 132 KRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKN 191 R L+E K L + + GV A F ++ G L+GG +A+ R G+ + Sbjct 137 ----ARERLRESEKTLSQNIYERGVDDA-GFGRIRSKGDAALFGGHTTQAMKDRYGITQT 191 Query 192 QKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMP 251 + + D + + +AA T ++++ + + + H VR + + G P Sbjct 192 RPLADFLPTLTIAAKNLATEMTNHNVQQEDLRGEVAITSEHVQNNESVRHMLGQR-GIKP 250 Query 252 EELPTPQVSIKQLENSVKITEKK 274 E LP P+ IK+LE VK EK+ Sbjct 251 ETLP-PEEDIKKLERRVKADEKR 272 >ref|ZP_08488352.1| DNA-damage-inducible protein D [Acidithiobacillus ferrivorans SS3] gb|EGK90921.1| DNA-damage-inducible protein D [Acidithiobacillus ferrivorans SS3] Length=280 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 99/259 (38%), Positives = 147/259 (56%), Gaps = 11/259 (4%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 +G E W AR L LLGYS++ +F+ V+T+AK ACE SGH + DHF ++ MV +GS ++R Sbjct 22 SGVEFWLARDLQHLLGYSKWDNFLNVVTKAKTACEVSGHAVADHFADVGKMVDLGSGSQR 81 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 + D++L+R+ACYL+ QNGDP K IA QTYFA+QTRR EL +Q D +R+ Sbjct 82 EVDDLMLTRFACYLIAQNGDPKKHEIAFAQTYFAVQTRRAEL-----IEQRLLDAERVTA 136 Query 137 RNELKEHNKQLVEAA-QQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKIL 195 R +L K+L +Q G DFA+ ++ G L+G Q A+ + + N+ + Sbjct 137 RKKLILTEKELSHVIFEQTG--GNQDFALIRSKGDHALFGKSTQ-AMKAQWQIPDNRPLA 193 Query 196 DHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP 255 D + L A F A T + +NS++ ++ H VR+T+ E G PE LP Sbjct 194 DFAPTIILKAKDFAAEITIFNAREHQLNSERAISSEHITNNEAVRKTLLE-RGIRPEVLP 252 Query 256 TPQVSIKQLENSVKITEKK 274 P +K++E S+ EKK Sbjct 253 -PAEDVKKVERSLSAEEKK 270 >ref|ZP_07153958.1| hypothetical protein HMPREF9530_04098 [Escherichia coli MS 21-1] gb|EFK19284.1| hypothetical protein HMPREF9530_04098 [Escherichia coli MS 21-1] Length=77 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%) Query 198 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTP 257 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTP Sbjct 1 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTP 60 Query 258 QVSIKQLENSVKITEKK 274 QVSIKQLENSVKITEKK Sbjct 61 QVSIKQLENSVKITEKK 77 >ref|YP_002936213.1| hypothetical protein EUBREC_0275 [Eubacterium rectale ATCC 33656] gb|ACR74079.1| Hypothetical protein EUBREC_0275 [Eubacterium rectale ATCC 33656] Length=168 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 81/136 (59%), Positives = 97/136 (71%), Gaps = 7/136 (5%) Query 49 ACENSGHTIDDHFEEILDMVKIG--SNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQ 106 ACENSGH+I D F E+ +V+ G +N K KD LSRYACYL+VQNGDP K VIA GQ Sbjct 3 ACENSGHSIPDDFPEVRKIVEAGVTTNPK---KDYELSRYACYLIVQNGDPRKEVIALGQ 59 Query 107 TYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQ 166 TYFAIQT RQE+AD F +L ED +RL +R ++K+ N+ L E A AGV T +FAIFQ Sbjct 60 TYFAIQTYRQEVADH--FNELDEDNRRLVVRGDIKQWNQMLAETAHNAGVITNEEFAIFQ 117 Query 167 NHGYQGLYGGLDQKAI 182 N GY GLYGGLD + I Sbjct 118 NAGYMGLYGGLDVEGI 133 >gb|EFZ46681.1| DNA-damage-inducible protein D domain protein [Escherichia coli E128010] gb|EGB35801.1| dinD protein [Escherichia coli E482] Length=77 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 76/77 (98%), Positives = 76/77 (98%), Gaps = 0/77 (0%) Query 198 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTP 257 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVG KVRQTIQELGGTMPEELPTP Sbjct 1 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVRQTIQELGGTMPEELPTP 60 Query 258 QVSIKQLENSVKITEKK 274 QVSIKQLENSVKITEKK Sbjct 61 QVSIKQLENSVKITEKK 77 >ref|YP_002741557.1| putative DNA damage inducible protein [Streptococcus pneumoniae Taiwan19F-14] ref|ZP_06978726.1| putative DNA damage inducible protein [Streptococcus pneumoniae str. Canada MDR_19A] ref|YP_003723732.1| DNA-damage-inducible protein [Streptococcus pneumoniae TCH8431/19A] gb|ACO23266.1| putative DNA damage inducible protein [Streptococcus pneumoniae Taiwan19F-14] gb|ADI68518.1| possible DNA-damage-inducible protein [Streptococcus pneumoniae TCH8431/19A] Length=186 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 78/153 (50%), Positives = 106/153 (69%), Gaps = 2/153 (1%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE IK I+ NG E W AR L K L Y+E+R+F+ V+ +AK AC+ + + I +HF ++ Sbjct 11 FENIKHIDENGVEFWYARDLQKTLEYTEWRNFLLVIDKAKIACDTAKNPIVEHFVDVNKS 70 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + G N R +KD L+RYACYL+VQNGDP K VIA GQTYFA++TR+QEL E F L Sbjct 71 IPNGYNTTRDIKDFKLTRYACYLIVQNGDPRKEVIALGQTYFALKTRQQEL--QENFDNL 128 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATAT 160 E++KRL +R+E+K HNK L E+A+ A AT + Sbjct 129 TEEQKRLAIRDEIKHHNKSLSESAESAENATYS 161 >ref|ZP_05853240.1| DNA-damage-inducible protein D [Blautia hansenii DSM 20583] ref|ZP_08332740.1| hypothetical protein HMPREF0992_01664 [Lachnospiraceae bacterium 6_1_63FAA] gb|EEX22763.1| DNA-damage-inducible protein D [Blautia hansenii DSM 20583] gb|EGG83392.1| hypothetical protein HMPREF0992_01664 [Lachnospiraceae bacterium 6_1_63FAA] Length=287 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 97/275 (35%), Positives = 145/275 (52%), Gaps = 9/275 (3%) Query 1 MNEHHQPFEEIKLINANG-AEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDD 59 M + Q ++ + IN E W AR+L LLGY + +F + RA E+C+ SG + D Sbjct 6 MEQIRQKYDLVIHINEEADVEFWYARELMSLLGYDRWENFDKAVGRAIESCKTSGIEVSD 65 Query 60 HFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELA 119 HF E+ M+ IG KR +KD +L+RYACYL+ QNGDP K IA Q+YFA+QTR+QEL Sbjct 66 HFREVTKMITIGKGGKRKVKDYMLTRYACYLIAQNGDPKKEEIAFAQSYFAVQTRKQELI 125 Query 120 DDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQ 179 ++ L E R R LKE K+L + + GV A F ++ G + L+GG Sbjct 126 EERI--SLIE---RTQARGRLKEAEKRLSQNIYERGVDDAG-FGRIRSKGDRALFGGYST 179 Query 180 KAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKV 239 + + + G+K+N+ + D + + +AA T ++ + ++ H + Sbjct 180 QEMKSKLGVKENRPLADFLPTLTIAAKNLATEMTNYNVEEKDLQGEKAITDEHVQNNSTI 239 Query 240 RQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 R + + G PE LP P IK+LE VK EKK Sbjct 240 RDMLGQR-GIKPENLP-PSEDIKKLERRVKSQEKK 272 >ref|ZP_05347674.3| DNA-damage-inducible protein D [Bryantella formatexigens DSM 14469] gb|EET59626.1| DNA-damage-inducible protein D [Bryantella formatexigens DSM 14469] Length=283 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 97/267 (36%), Positives = 152/267 (56%), Gaps = 9/267 (3%) Query 8 FEEIKLINANGA-EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 F++I + +GA E W AR+L LLGYS + +F V+ +A +CEN+G +++HF + Sbjct 20 FDDIIHKSEDGAIEFWYARELQPLLGYSRWENFELVIKKAMISCENAGGNVNNHFRGVTK 79 Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 M+K+ NA+R +K+ VL+RYACYL+ QNGD K IA Q+YFA+QTR+QEL +D + Sbjct 80 MIKLAKNAERGIKEYVLTRYACYLIAQNGDVRKDEIAFAQSYFAVQTRKQELIEDRI--K 137 Query 127 LREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 L E RL R +L+E K+L + + GV A F ++ G Q L+GG K + +R Sbjct 138 LIE---RLNAREKLRESEKRLSQNIYERGVDDAG-FGRIRSKGDQALFGGFTTKDMKERL 193 Query 187 GLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQEL 246 +K+N+ + D + + +AA T +++ + + H VR+ + + Sbjct 194 RVKENRPLADFLPTLTIAAKNLATEMTNYNVEQKELYGEAPITDEHVQNNSSVREMLGQR 253 Query 247 GGTMPEELPTPQVSIKQLENSVKITEK 273 G PE+LP P +K+LE VK EK Sbjct 254 -GIKPEDLP-PAEDLKKLERRVKRDEK 278 >ref|ZP_06963137.1| putative DNA damage inducible protein [Streptococcus pneumoniae str. Canada MDR_19F] Length=188 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 78/153 (50%), Positives = 106/153 (69%), Gaps = 2/153 (1%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE IK I+ NG E W AR L K L Y+E+R+F+ V+ +AK AC+ + + I +HF ++ Sbjct 11 FENIKHIDENGVEFWYARDLQKTLEYTEWRNFLLVIDKAKIACDTAKNPIVEHFVDVNKS 70 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + G N R +KD L+RYACYL+VQNGDP K VIA GQTYFA++TR+QEL E F L Sbjct 71 IPNGYNTTRDIKDFKLTRYACYLIVQNGDPRKEVIALGQTYFALKTRQQEL--QENFDNL 128 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATAT 160 E++KRL +R+E+K HNK L E+A+ A AT + Sbjct 129 TEEQKRLAIRDEIKHHNKSLSESAESAENATYS 161 >ref|YP_912153.1| DNA-damage-inducible protein D [Chlorobium phaeobacteroides DSM 266] gb|ABL65729.1| DNA-damage-inducible protein D [Chlorobium phaeobacteroides DSM 266] Length=284 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 99/258 (38%), Positives = 146/258 (56%), Gaps = 11/258 (4%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E W AR L LLGYS++ +F+ V+++AK ACE SGH + DHF ++ MV +GS ++R Sbjct 23 GVEYWLARDLQYLLGYSKWDNFLNVVSKAKTACEISGHNVADHFADVGKMVDLGSGSQRE 82 Query 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 + DI+L+RYACYL+ QNGD K IA QTYFAIQTRR E+ + ++L E E R+ R Sbjct 83 VDDIMLTRYACYLIAQNGDSRKQEIAFAQTYFAIQTRRAEVIE----QRLLEAE-RVSAR 137 Query 138 NELKEHNKQLVEAA-QQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILD 196 +L K+L +Q G + +FA+ ++ G Q L+G Q A+ + + + D Sbjct 138 KKLSATEKELSGVIFEQTG--STENFALIRSKGDQALFGKSTQ-AMKAEWNVPDKRPLAD 194 Query 197 HMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPT 256 + L A F T + G+ S+ Q +T H + VR+T+ E G PE LP Sbjct 195 FAPTIILKAKDFATEITIFNAREHGMKSEGQISTEHITNNKAVRKTLLER-GIRPESLP- 252 Query 257 PQVSIKQLENSVKITEKK 274 P +K++E + EKK Sbjct 253 PAEDVKKVERRLASEEKK 270 >gb|EGF42121.1| DNA-damage-inducible protein D [Vibrio parahaemolyticus 10329] Length=287 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 153/274 (55%), Gaps = 14/274 (5%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 NE Q F + K+ E W AR+L K+LGY + +FI V+ +AK +C ++ + DH Sbjct 13 FNEIGQHFPDSKI------EFWYARELQKILGYDRWENFINVIEKAKSSCISTKVEVSDH 66 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F ++ MV IGS A+R ++DI+L+RYACYL+ QNGDP K IA QTYFA+QTR+QEL + Sbjct 67 FRDVTKMVVIGSGAERPVEDIMLTRYACYLIAQNGDPRKEPIAFAQTYFALQTRKQELIE 126 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 + QLR + R+ R +L+E +L + + GV F ++ G L+GG + Sbjct 127 E----QLRLQD-RIQAREKLRESETELSKNIYERGVDDKG-FGRIRSRGDAALFGGNTTQ 180 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 ++ + + K++ + D + + +AA T ++++ + ++ H + +R Sbjct 181 SMKNKLSVPKSRALADFLPTVTIAAKNLATEITNHNVRQNDLQGERSITDEHVQNNKSLR 240 Query 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 + E G PEELP + +K+LE VK EK+ Sbjct 241 DMLAE-RGIKPEELPAEE-DLKKLERRVKSDEKR 272 >ref|ZP_08330971.1| hypothetical protein IMCC1989_2286 [gamma proteobacterium IMCC1989] gb|EGG92884.1| hypothetical protein IMCC1989_2286 [gamma proteobacterium IMCC1989] Length=287 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 153/271 (56%), Gaps = 9/271 (3%) Query 5 HQPFEEIKLI-NANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEE 63 +Q F +I I + E W AR L ++L YS++R+F+ V+ +AKEAC NS +++HF + Sbjct 10 NQRFNQISHIWEGSEIEYWFARDLQEILEYSDWRNFLKVIEKAKEACNNSAGKVENHFVD 69 Query 64 ILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEA 123 + MV IGS A+R + DI+L+RYACYLV QNGDP K IA Q+YFA+QTR+QEL ++ Sbjct 70 VNKMVTIGSGAEREIDDIMLTRYACYLVAQNGDPRKDAIAFAQSYFALQTRKQELIEE-- 127 Query 124 FKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIH 183 QLR + R+ R +LKE +L + + GV F ++ G L+GG +++ Sbjct 128 --QLRLQD-RIQAREKLKESETELSKNIYERGV-DDRGFGRIRSRGDAALFGGNTTQSMK 183 Query 184 QRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTI 243 + + K++ + D + + +AA T ++++ + + H + +R + Sbjct 184 NKLSVPKSRALADFLPTVTIAAKNLATEITNHNVRQNDLQGEHPITDEHIQNNKSLRDML 243 Query 244 QELGGTMPEELPTPQVSIKQLENSVKITEKK 274 E G PEEL + +K+LE VK EK+ Sbjct 244 GE-RGIKPEELAAEE-DLKKLERRVKSDEKR 272 >ref|ZP_06253312.1| DNA-damage-inducible protein D [Prevotella copri DSM 18205] gb|EFB34314.1| DNA-damage-inducible protein D [Prevotella copri DSM 18205] Length=278 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 97/269 (36%), Positives = 153/269 (56%), Gaps = 13/269 (4%) Query 8 FEEIKLINAN---GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 FE+ + I AN G E WSAR+L ++LGYS++ F V+ RAK+AC N+G ++ HF + Sbjct 10 FEQFEAI-ANEYEGVECWSARELAQVLGYSKWERFEGVIERAKDACINAGEMVEYHFPGV 68 Query 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 M+ + A+R +KD +L+RYACYL+ QNGDP KP I+ Q YFA+QTRR EL Sbjct 69 GKMIPLAKGAQREVKDYMLTRYACYLIAQNGDPRKPQISFAQNYFAVQTRRAELVQ---- 124 Query 125 KQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQ 184 K+L E E R+ R +L E K+L + GV + FAI ++ G + L+ LD + + Sbjct 125 KRLLEYE-RVQARAKLAETEKRLSGVLYERGV-DSKGFAIIRSLGDKALF-NLDTALLKR 181 Query 185 RKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQ 244 + G ++ + D + + + A F A T +++ ++ +Q H D + VR + Sbjct 182 KLGAPNSRPLADFLPTLNIKAKDFAAEMTSVNVQQKDLHGQQSICQEHVDNNKAVRNMML 241 Query 245 ELGGTMPEELPTPQVSIKQLENSVKITEK 273 + G +PE LP + +K++E +K EK Sbjct 242 Q-RGIVPENLPAGE-DVKKVERRLKSDEK 268 >ref|YP_864066.1| DNA-damage-inducible protein D [Magnetococcus sp. MC-1] gb|ABK42660.1| DNA-damage-inducible protein D [Magnetococcus sp. MC-1] Length=281 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 97/259 (37%), Positives = 148/259 (57%), Gaps = 11/259 (4%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 NG E W AR L LLGY+++ +F+ V+++AK ACE +GH I DHF ++ MV++GS ++R Sbjct 22 NGVEYWLARDLQHLLGYTKWENFLNVISKAKTACEVTGHDIADHFADVGKMVELGSGSQR 81 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 + DI+L+RYACYL QNGD AK IA QTYFA+QTR+ EL + ++L E E R+ Sbjct 82 EISDIMLTRYACYLTAQNGDSAKQPIAFAQTYFAMQTRKAELIE----QRLLEAE-RVSA 136 Query 137 RNELKEHNKQLVEAA-QQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKIL 195 R +L K+L + +QAG +FA+ + G L+G + KA+ + + N+ + Sbjct 137 RKKLSTTEKELSDVIFEQAG--GNQNFALIHSKGDTALFGK-NTKAMKAQWRVPDNRPLA 193 Query 196 DHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP 255 D + L A F T + + S++Q + H VRQT+ + G PE L Sbjct 194 DFAPTIILKAKDFATEITIHNAREHNMRSERQISGEHVTNNEAVRQTLLD-RGIRPESL- 251 Query 256 TPQVSIKQLENSVKITEKK 274 +P +K++E + EKK Sbjct 252 SPAEDVKKVERRLASAEKK 270 >ref|YP_003006513.1| DNA-damage-inducible protein D [Dickeya zeae Ech1591] gb|ACT09034.1| DNA-damage-inducible protein D [Dickeya zeae Ech1591] Length=289 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 137/261 (52%), Gaps = 8/261 (3%) Query 14 INANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSN 73 I G E W AR L + LGY+ + +F + RA E+C+ +G+ DHF + MVKIGS Sbjct 20 IPEEGVEFWFARDLMEPLGYARWENFQTAIGRAVESCKTTGYDESDHFRGVTKMVKIGSG 79 Query 74 AKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKR 133 A RA++D +L+RYACYL+ QNGDP K IA Q+YFAIQTR+QEL +D Q R D Sbjct 80 ADRAVEDFMLTRYACYLIAQNGDPRKEAIAFAQSYFAIQTRKQELIEDRMRLQARLD--- 136 Query 134 LFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQK 193 R L+E K L + + GV F ++ G L+GG + + R G+ + + Sbjct 137 --ARERLRESEKTLSQNLYERGV-DDKGFGRIRSRGDAALFGGNTTQMMKDRYGITQARP 193 Query 194 ILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEE 253 + D + + +AA T + + ++ + H VR + + G PE+ Sbjct 194 LADFLPTLTIAAKNLATEMTNHNVMQGQLHGEPSITREHEQNNLSVRDMLGQR-GIKPEQ 252 Query 254 LPTPQVSIKQLENSVKITEKK 274 LP + IK+LE VK EKK Sbjct 253 LPAEE-DIKKLERRVKTEEKK 272 >ref|ZP_05844684.1| DNA-damage-inducible protein D [Rhodobacter sp. SW2] gb|EEW24375.1| DNA-damage-inducible protein D [Rhodobacter sp. SW2] Length=280 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 98/260 (37%), Positives = 142/260 (54%), Gaps = 13/260 (5%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 +G E W AR L LLGY+++ +F+ V+T+AK ACE SGH + DHF ++ MV++GS ++R Sbjct 22 SGVEYWLARDLQILLGYAKWDNFLNVITKAKTACEVSGHDVRDHFADVGKMVELGSGSRR 81 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 + DI+L+R+ACYL+ QNGDPAK IA QTYFAIQTRR EL +Q + +RL Sbjct 82 EIDDIMLTRFACYLIAQNGDPAKSEIAFAQTYFAIQTRRAEL-----IEQRMLESERLAA 136 Query 137 RNELKEHNKQL--VEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKI 194 R +L E K+L V Q G DFA ++ G L+G A+ + N+ + Sbjct 137 RKKLTETEKELSGVIYEQTGG---NQDFATIRSKGDHALFGK-STAAMKSHWKVPDNRPL 192 Query 195 LDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEEL 254 D + L A F T + G++S+ + H VR+T+ G PE L Sbjct 193 ADFAPTIILKAKDFATEITIFNARAHGMSSEPVISAEHVTNNDAVRKTLLS-RGIRPEAL 251 Query 255 PTPQVSIKQLENSVKITEKK 274 P IK++E + E+K Sbjct 252 -APDEDIKKVERRLVSDERK 270 >ref|ZP_03391228.1| DNA-damage-inducible protein D [Capnocytophaga sputigena Capno] gb|EEB65633.1| DNA-damage-inducible protein D [Capnocytophaga sputigena Capno] Length=292 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 90/254 (35%), Positives = 140/254 (55%), Gaps = 8/254 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +LGY+ + +F+ + RA +C++ +DDHF E+ MV++GS +KR + Sbjct 35 EVWFARELQTILGYARWENFLVAIHRAVASCKSQQINVDDHFREVTKMVELGSGSKREIM 94 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D +L+RYACYL+ QNGDP K +A Q+YFA+QTR+ EL +E L RL R++ Sbjct 95 DFMLTRYACYLIAQNGDPKKEEVAFAQSYFAVQTRKAELI-EERLNLL----SRLETRDK 149 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMG 199 L+ KQL + + GV FA ++ G L+GG + + R G+K N+ + D + Sbjct 150 LRSAEKQLSQNIYERGVDDK-GFARIRSKGDTALFGGYTTEDMKLRLGVKANRPLADFLP 208 Query 200 STELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQV 259 + +AA T ++ + ++ + H + VRQ + + G PEELP P Sbjct 209 TLTIAAKNLATEMTNYNVESNDLHGESAITHEHVQNNQTVRQMLGQ-RGIKPEELP-PAE 266 Query 260 SIKQLENSVKITEK 273 IK+LE V EK Sbjct 267 DIKKLERKVARDEK 280 >ref|ZP_06422974.1| DNA-damage-inducible protein D [Prevotella sp. oral taxon 317 str. F0108] gb|EFC67817.1| DNA-damage-inducible protein D [Prevotella sp. oral taxon 317 str. F0108] Length=287 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 93/265 (35%), Positives = 143/265 (53%), Gaps = 9/265 (3%) Query 9 EEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMV 68 +EIK N E W AR+L ++LGY+ + +F+ ++RA E+C+ +DDHF E+ M+ Sbjct 18 KEIKDDANNTIEVWYARELQQVLGYTRWENFVVAISRAIESCKTLKVNVDDHFREVTKMI 77 Query 69 KIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLR 128 A R ++D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+ EL +E +Q+ Sbjct 78 PTAKGAHRGVQDFMLTRYACYLIAQNGDPKKEEIAFAQSYFALQTRKTELI-EERLQQI- 135 Query 129 EDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGL 188 RL R L+ KQL + GV FA ++ G L+GGL + + QR G+ Sbjct 136 ---ARLDTRERLRSSEKQLSRNIYERGV-DEKGFARIRSKGDHALFGGLTTEQMKQRLGI 191 Query 189 KKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGG 248 K + D++ + +AA T +++ ++ + + H R VR + + G Sbjct 192 KSGA-LADYLPTLTIAAKNLATEMTNYNVEQKNLHGENRITAEHVQNNRSVRGMLGQ-RG 249 Query 249 TMPEELPTPQVSIKQLENSVKITEK 273 PEELP P IK++E V EK Sbjct 250 IKPEELP-PAEDIKKVERRVAKEEK 273 >ref|ZP_08616419.1| hypothetical protein HMPREF0988_02004 [Lachnospiraceae bacterium 1_4_56FAA] gb|EGN36561.1| hypothetical protein HMPREF0988_02004 [Lachnospiraceae bacterium 1_4_56FAA] Length=282 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 93/265 (35%), Positives = 141/265 (53%), Gaps = 9/265 (3%) Query 6 QPFEEIKLINANG-AEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 Q ++ I +N E W AR+L +LLGY+ + +F + RA E+C+ SG I DHF E+ Sbjct 11 QKYDLIMHVNEEADVEFWYARELMELLGYNRWENFDKAVCRAMESCKTSGIEILDHFREV 70 Query 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 MV++GS AKR +KD +L+RYACYL+ QNGDP K IA Q+YFA+QTR+QEL ++ Sbjct 71 TKMVELGSGAKRKIKDYMLTRYACYLIAQNGDPKKEEIAFAQSYFAVQTRKQELIEERI- 129 Query 125 KQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQ 184 L E R R L+E K+L + + GV A F ++ G + L+GG + + Sbjct 130 -SLIE---RTQARGRLRESEKKLSQNIYERGVDDA-GFGRIRSKGDRALFGGYSTQEMKS 184 Query 185 RKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQ 244 R G+K N+ + D + + +AA T ++ + + H +R + Sbjct 185 RLGVKDNRPLADFLPTLTIAAKNLATEMTNYNVEEKDLQGEASITVEHVQNNSTIRDMLG 244 Query 245 ELGGTMPEELPTPQVSIKQLENSVK 269 + G PE LP P IK + +K Sbjct 245 Q-RGIKPENLP-PSEDIKNWKEKLK 267 >gb|AEA82216.1| DNA-damage-inducible protein D [Pseudomonas stutzeri DSM 4166] Length=298 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 90/255 (35%), Positives = 136/255 (53%), Gaps = 8/255 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR L + LGY+ + +F+ + RA +CE +G+ + DHF + M++IG R + Sbjct 26 EFWFARDLQEPLGYARWENFLTAIQRAMTSCETTGYEVADHFRGVTKMIEIGKGGLRPVD 85 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+QEL +D Q R D R+ Sbjct 86 DFMLTRYACYLIAQNGDPRKSPIAFAQSYFALQTRKQELIEDRMRLQARLDA-----RDR 140 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMG 199 LKE K L + + GV FA ++ G L+GG +A+ R G+ K + + D + Sbjct 141 LKESEKALSQNIYERGVDDEG-FARIRSRGDAALFGGNTTQAMKDRYGIVKTRPLADFLP 199 Query 200 STELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQV 259 + +AA T +++ + + H VR+ + + G PEELP + Sbjct 200 TLTIAAKNLATEITNHNVQQADLQGESAIAKEHVQNNLSVREMLGQ-RGIKPEELPAEE- 257 Query 260 SIKQLENSVKITEKK 274 I++LE VK EKK Sbjct 258 DIRKLERRVKSEEKK 272 >ref|ZP_02926058.1| DNA-damage-inducible protein D [Verrucomicrobium spinosum DSM 4136] Length=280 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 96/259 (37%), Positives = 145/259 (55%), Gaps = 11/259 (4%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 G E W AR + LLGY E+R+F V+++AK ACE S H + DHF + MV++GS ++R Sbjct 22 TGVEYWLARDVQHLLGYDEWRNFSAVISKAKVACEVSSHRVSDHFVGVNKMVELGSGSQR 81 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 ++DI+L+RYACYL+ QNGDP KP IA QTYFAIQTRR EL + ++L E E RL Sbjct 82 EIEDILLTRYACYLIAQNGDPRKPEIAFAQTYFAIQTRRAELIE----QRLLETE-RLSA 136 Query 137 RNELKEHNKQLVEAA-QQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKIL 195 R +L K+L + +Q G DFA+ ++ G Q L+G + A+ + + + + Sbjct 137 RKKLSATEKELSQVIYEQTG--GNDDFALIRSKGDQALFGKTTE-AMKAHWKVPQGRPLA 193 Query 196 DHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP 255 D + L A F T ++ ++++ + H VR T+ E G PE LP Sbjct 194 DFAPTIILKAKDFATEITIFNARQHEMSTEHAISKEHITNNSAVRNTLLE-RGIRPESLP 252 Query 256 TPQVSIKQLENSVKITEKK 274 + +K++E + EK+ Sbjct 253 AAE-DLKKVERRLVSDEKR 270 >ref|ZP_08446408.1| DNA-damage-inducible protein D family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gb|EGJ56208.1| DNA-damage-inducible protein D family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length=287 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/254 (35%), Positives = 140/254 (55%), Gaps = 8/254 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +LGY+ + +F+ + RA +C++ +DDHF E+ MV++GS +KR + Sbjct 30 EVWFARELQTILGYARWENFLVAIHRAVASCKSQQINVDDHFREVTKMVELGSGSKREIM 89 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D +L+RYACYL+ QNGDP K +A Q+YFA+QTR+ EL +E L RL R++ Sbjct 90 DFMLTRYACYLIAQNGDPKKEEVAFAQSYFAVQTRKAELI-EERLNLL----SRLETRDK 144 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMG 199 L+ KQL + + GV FA ++ G L+GG + + R G+K N+ + D + Sbjct 145 LRSAEKQLSQNIYERGV-DDKGFARIRSKGDTALFGGHTTEDMKLRLGVKANRPLADFLP 203 Query 200 STELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQV 259 + +AA T ++ + ++ + H + VRQ + + G PEELP P Sbjct 204 TLTIAAKNLATEMTNYNVESNDLHGESAITQEHVQNNQSVRQMLGQ-RGIKPEELP-PAE 261 Query 260 SIKQLENSVKITEK 273 IK+LE V EK Sbjct 262 DIKKLERKVARDEK 275 >gb|EBG33904.1| hypothetical protein GOS_9449615 [marine metagenome] Length=260 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/246 (36%), Positives = 138/246 (56%), Gaps = 8/246 (3%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 +G E W AR L LL YSE+R F V+ +AK++C+N+G I DHF MV+IGS +R Sbjct 22 DGIEFWFARDLQLLLDYSEWRKFQGVIEKAKDSCKNAGFDITDHFVGAAKMVRIGSGTER 81 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 + D++L+RYACYL+ QNGDP K IA Q+YFAIQTR+QEL ++ L E R+ Sbjct 82 EISDMLLTRYACYLIAQNGDPRKEQIAFAQSYFAIQTRKQELIEERI--SLIE---RINA 136 Query 137 RNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILD 196 R++L +L + + GV A FA ++ G + L+GG + R + K++ + D Sbjct 137 RHKLTASETELSKLIYERGVDDA-GFARIRSKGDKALFGGNTTSDMKTRLNVPKSRPLAD 195 Query 197 HMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPT 256 + + + A T +K+D ++ +++ T H VR + + G PEELP Sbjct 196 FLPTITITAKNLATEITNFNVKKDNLHDEEKITTEHIQNNTDVRGLLTK-RGIKPEELP- 253 Query 257 PQVSIK 262 P+ +K Sbjct 254 PETDLK 259 >ref|ZP_01982350.1| DNA-damage-inducible protein D [Vibrio cholerae 623-39] gb|EDL72994.1| DNA-damage-inducible protein D [Vibrio cholerae 623-39] Length=286 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 95/259 (36%), Positives = 141/259 (54%), Gaps = 11/259 (4%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 NG E W AR L LLGY ++ +F+ V+++AK ACE SGH I DHF ++ MV++GS ++R Sbjct 22 NGVEYWLARDLQHLLGYGKWDNFVSVISKAKTACEISGHAIVDHFADVGKMVELGSGSQR 81 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 + D++L+RYACYLV QNGD K IA QTYFA+QTR+ EL KQ + +R+ Sbjct 82 EIDDVMLTRYACYLVAQNGDSRKQEIAFAQTYFAMQTRKAEL-----IKQRLLEAERVLA 136 Query 137 RNELKEHNKQLVEAA-QQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKIL 195 R +L K+L +Q G +FA+ ++ G L+G Q A+ + + N+ + Sbjct 137 RQKLSATEKELSSVIFEQTG--GNQNFALIRSKGDTALFGKSTQ-AMKAQWQVPDNRPLA 193 Query 196 DHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP 255 D + L A F T + + +QQ + H VRQT+ G PE LP Sbjct 194 DFAPTIILKAKDFATEITIHNARTQQMTREQQISIEHVTNNDAVRQTLLSR-GIRPEHLP 252 Query 256 TPQVSIKQLENSVKITEKK 274 P +K++E + +KK Sbjct 253 -PSEDVKKVERRLASADKK 270 >ref|ZP_01913584.1| DNA-damage-inducible protein D [Limnobacter sp. MED105] gb|EDM84645.1| DNA-damage-inducible protein D [Limnobacter sp. MED105] Length=280 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 146/258 (56%), Gaps = 11/258 (4%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 NG E W AR + LLGYS++ +F+ V+++AK AC+ SGH + +HF ++ MV++GS ++R Sbjct 22 NGVEYWLARDVQHLLGYSKWDNFLNVISKAKTACDVSGHDVINHFADVRKMVELGSGSQR 81 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 + DI+L+RYACYL+ QNGDP K IA QTYFAIQTR+ EL + ++L E E R+ Sbjct 82 EISDIMLTRYACYLIAQNGDPQKQEIAFAQTYFAIQTRKAELIE----QRLLEVE-RVTA 136 Query 137 RNELKEHNKQLVEAA-QQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKIL 195 R +L K+L + +Q G + +FA+ ++ G L+G + KA+ + + N + Sbjct 137 RKKLSATEKELSDIIYEQTG--GSENFALIRSKGDTALFGK-NTKAMKAQWKVPDNCPLA 193 Query 196 DHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP 255 D + L A F T + + +QQ + H VR+T+ G PE LP Sbjct 194 DFAPTIILKAKDFATEITIHNAREQAMGHEQQISQEHVTNNEAVRKTLLS-RGIRPESLP 252 Query 256 TPQVSIKQLENSVKITEK 273 P +K++E + EK Sbjct 253 -PAEDVKKVERRLTSAEK 269 >ref|ZP_01081014.1| DNA-damage-inducible protein D [Synechococcus sp. RS9917] gb|EAQ68747.1| DNA-damage-inducible protein D [Synechococcus sp. RS9917] Length=286 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 146/258 (56%), Gaps = 11/258 (4%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 +G E W AR L LLGY E+R F V+++A+ ACE SG + DHF E+ MVK+GS ++R Sbjct 26 DGVEYWLARDLQHLLGYGEWRSFCGVMSKARTACEISGKAVKDHFVEVTKMVKLGSGSER 85 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 + D++L+R ACYL+ QNGD +KP IA Q+YFA QTRR EL + K+L E E RL Sbjct 86 QIDDLMLTRLACYLIAQNGDSSKPQIAFAQSYFAAQTRRAELIE----KRLLESE-RLTA 140 Query 137 RNELKEHNKQLVEAA-QQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKIL 195 R +L K+L + +Q G FA+ ++ G Q L+G + KA+ + + + + + Sbjct 141 RQKLSSTEKELSQIIFEQTG--DEKGFALIRSKGDQALFGK-NTKAMKSQWKVPEGRPLA 197 Query 196 DHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP 255 D + L A F A T K + + ++ + ++ H VR+T+ + G PE LP Sbjct 198 DFAPTIILKAKDFAAEITIFNSKANDLKTEPEISSEHVTNNSAVRETLLQ-RGIRPEALP 256 Query 256 TPQVSIKQLENSVKITEK 273 + I+++E + +K Sbjct 257 AEE-DIRKVERRIASEDK 273 >ref|ZP_02426535.1| hypothetical protein ALIPUT_02702 [Alistipes putredinis DSM 17216] gb|EDS03163.1| hypothetical protein ALIPUT_02702 [Alistipes putredinis DSM 17216] Length=276 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 140/256 (54%), Gaps = 9/256 (3%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E WSAR+L LLGYS++ F V+ +A++AC N+G ++DHF + M+++ A+R Sbjct 22 GIECWSARELCGLLGYSKWEKFYNVIEKARDACVNAGEHVEDHFPRVGKMIELAKGAQRE 81 Query 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 + D +L+RYACYL+ QNGDP KP IA Q YFA+QTRR EL D +R+ R Sbjct 82 IDDYMLTRYACYLIAQNGDPRKPQIAFAQNYFAVQTRRAELVQQRIL-----DYERVQAR 136 Query 138 NELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDH 197 +L E K+L + GV + FAI ++ G + L+ LD + ++ G ++ + D Sbjct 137 AKLAETEKRLSGVLYERGV-DSRGFAIIRSKGDRALF-HLDTALVKRKLGAPDSRPLADF 194 Query 198 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTP 257 + + + A F A T ++ ++ + H D VR + G +PE+LP Sbjct 195 LPTIGIKAKDFAAEMTSVNAEQKNLHGQMAIEKEHVDNNVAVRNMLLS-RGIVPEQLPAG 253 Query 258 QVSIKQLENSVKITEK 273 + +K++E +K EK Sbjct 254 E-DVKKVERRLKSEEK 268 >emb|CBX27280.1| hypothetical protein N47_I07000 [uncultured Desulfobacterium sp.] Length=276 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 83/249 (33%), Positives = 139/249 (55%), Gaps = 8/249 (3%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 N E WSAR+L ++LGYS++ +F + +AK++CEN+G ++ DHF ++ M++IG +R Sbjct 21 NNLECWSARELQEILGYSKWDNFKNAIEKAKKSCENAGVSVSDHFADVGKMIEIGKGGQR 80 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 + DI L+RYACYL+ QNGD AK I+ QTYFA+QTR+QE+ +Q D R+ Sbjct 81 EIDDIALTRYACYLIAQNGDSAKSEISFAQTYFAVQTRKQEI-----IEQRLLDVDRVMA 135 Query 137 RNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILD 196 R++L + K+L + GV FA+ ++ G Q L+GG + +R + + + D Sbjct 136 RDKLTKSEKKLSGIIYERGV-DDRGFALIRSKGDQALFGGFSANDMKRRLMIPGGRPLAD 194 Query 197 HMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPT 256 + + + A F T + ++ + + H + VR+ + E G PE LP Sbjct 195 FLPTLTIKAKDFATELTSHNVIEKDLSGANRISDEHVENNTAVRKMLIER-GVKPEALP- 252 Query 257 PQVSIKQLE 265 P +K+++ Sbjct 253 PAKDVKKVQ 261 >ref|YP_984527.1| DNA-damage-inducible protein D [Acidovorax sp. JS42] gb|ABM40451.1| DNA-damage-inducible protein D [Acidovorax sp. JS42] Length=288 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 141/258 (54%), Gaps = 8/258 (3%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 +G E W AR L + LGY+ + +F + RA E+C+++G+ DHF + MV +GS A+R Sbjct 23 DGIEFWFARDLMEPLGYARWENFTTAIHRAIESCKSTGYKESDHFRGVTKMVTLGSGAQR 82 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 ++D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+QEL +D Q RL Sbjct 83 PVEDFMLTRYACYLIAQNGDPRKQAIAFAQSYFAVQTRKQELIEDRMRLQ-----ARLEA 137 Query 137 RNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILD 196 R+ L+E K L + + GV A F + G L+GG + + ++ G+ + + + D Sbjct 138 RDRLRESEKALSQNIYERGVDDA-GFGRIRAQGDAALFGGHTTQMMKEKYGIVQTRPLAD 196 Query 197 HMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPT 256 + + +AA T +++ + ++ H + VR + + G PE+LP Sbjct 197 FLPTLTIAAKNLATEMTNHNVQQANLLGERSITHEHVQNNQSVRVMLGQR-GIAPEQLPA 255 Query 257 PQVSIKQLENSVKITEKK 274 + IK+LE VK +KK Sbjct 256 EE-DIKKLERRVKAEDKK 272 >ref|ZP_05850817.1| DNA-damage-inducible protein d [Haemophilus influenzae NT127] ref|YP_004138952.1| DNA-damage-inducible protein d [Haemophilus influenzae F3047] ref|ZP_08252505.1| DNA-Damage-inducible protein d [Haemophilus aegyptius ATCC 11116] gb|EEW77792.1| DNA-damage-inducible protein d [Haemophilus influenzae NT127] emb|CBY87287.1| DNA-damage-inducible protein d [Haemophilus influenzae F3047] gb|EGF13525.1| DNA-Damage-inducible protein d [Haemophilus aegyptius ATCC 11116] Length=281 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 138/259 (53%), Gaps = 20/259 (7%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 NG W A L +LGY++ + + + +A C N I D+F I + + Sbjct 31 NGITYWYASDLAMMLGYNDMQAILKAMNKAYAVCNNLNIPIADNF--------IQTQSPN 82 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD-EAFKQLREDEKRLF 135 D ++R+ACYL V NG+ + P +AA Q YFA +LAD+ Q E+ R++ Sbjct 83 TPSDFKMTRFACYLTVMNGNISNPKVAAAQAYFA------KLADEIHTLCQSAEEVDRVY 136 Query 136 LRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQ-KI 194 LR ++ + K L A + GV ++A FQN GY+G+Y ++ K++ +KGL ++ + Sbjct 137 LRGDISDREKSLSHIAHKHGV---ENYAFFQNAGYRGMYN-MNIKSLKNKKGLFDDKASL 192 Query 195 LDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEEL 254 LD M + ELAAN+FR TQTE K++ + ++ VGR VR + GT PE+L Sbjct 193 LDFMDNEELAANIFRVTQTEAKIRNQNIKGQKNLENAAETVGRSVRNVMISNTGTAPEDL 252 Query 255 PTPQVSIKQLENSVKITEK 273 Q I ++++S+K T K Sbjct 253 ALSQEKINKIQSSIKKTHK 271 >ref|YP_004447880.1| DNA-damage-inducible protein D [Haliscomenobacter hydrossis DSM 1100] gb|AEE51007.1| DNA-damage-inducible protein D [Haliscomenobacter hydrossis DSM 1100] Length=287 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 89/270 (32%), Positives = 145/270 (53%), Gaps = 10/270 (3%) Query 6 QPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 Q FEE ++ + E WSAR+L +LGY ++ +F+ + +AK ACE +G I+ HF ++ Sbjct 11 QKFEEAAYLHES-VECWSARELQVILGYRKWDNFLHAIEKAKSACEGAGQKIEHHFADVG 69 Query 66 DMVKIGSNAKRALKDIVLSRYACYLVVQNGDPA-KPVIAAGQTYFAIQTRRQELADDEAF 124 M+ +G +R + D L+RYACYL+ QNGDP KP IA QTYFA+QTR+QE+ + Sbjct 70 KMINLGKGGQRNVVDFALTRYACYLIAQNGDPTKKPEIAFAQTYFAVQTRKQEIIEQRLL 129 Query 125 KQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQ 184 D R+ R +L + K+L + GV FAI ++ G + L+GG + + + + Sbjct 130 -----DIDRVSAREKLSKTEKKLSGIIYERGV-NEISFAIIRSEGDKALFGGWNTQDMKR 183 Query 185 RKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQ 244 + + + + D + + + A F A T + + + Q H D VR+ +Q Sbjct 184 KLAVPGGRPLADFLPTLTIKAKDFAAELTSHNVIDKDLQGEGQIKKEHIDNNLAVRKILQ 243 Query 245 ELGGTMPEELPTPQVSIKQLENSVKITEKK 274 E G PE LP + ++K++E + KK Sbjct 244 ER-GVRPENLPAVE-AVKKVERRLNADNKK 271 >ref|ZP_03799005.1| hypothetical protein COPCOM_01262 [Coprococcus comes ATCC 27758] gb|EEG90525.1| hypothetical protein COPCOM_01262 [Coprococcus comes ATCC 27758] Length=263 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 91/261 (34%), Positives = 143/261 (54%), Gaps = 9/261 (3%) Query 4 HHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEE 63 + + F+EI+ NG E W AR+L LL YS++++F VL +AK AC N+G ++DHF + Sbjct 9 YKKRFDEIRH-EENGVEFWYARELMHLLDYSKWQNFENVLLKAKVACANNGIVVEDHFAD 67 Query 64 ILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEA 123 MV +GS A R ++D +L+RYACYL+ +NGDP K IA Q+YFA+QTR+QEL +E Sbjct 68 ASKMVILGSGANREVEDYMLTRYACYLIAENGDPRKEQIAFAQSYFAVQTRKQELI-EER 126 Query 124 FKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIH 183 + E R +L+E K+L + + GV A F ++ G Q L+GG K + Sbjct 127 ISYIERTEA----RGKLRESEKRLSQNIYERGVDDA-GFGRIRSKGDQALFGGFTTKQMK 181 Query 184 QRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTI 243 +R G++ + + D + + +AA T ++ + + H + VR + Sbjct 182 ERLGVQDKRPLADFLPTLTIAAKNLATEMTNYNVEEKDLQGETAITVEHVENNTSVRDML 241 Query 244 QELGGTMPEELPTPQVSIKQL 264 + G PE LP + IK+L Sbjct 242 GQR-GIKPENLPASE-DIKKL 260 >emb|CBK63481.1| hypothetical protein AL1_09400 [Alistipes shahii WAL 8301] Length=289 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/255 (35%), Positives = 136/255 (53%), Gaps = 8/255 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +LGY+ + +F+ + RA +C++ +DDHF E+ MV +GS AKR + Sbjct 30 EVWFARELQTILGYARWENFLVAIHRAVASCKSQDINVDDHFREVTKMVDLGSGAKREVS 89 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+ EL +E L RL R++ Sbjct 90 DFMLTRYACYLIAQNGDPKKEEIAFAQSYFAVQTRKAELI-EERLNLL----SRLETRDK 144 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMG 199 L+ KQL + + GV F ++ G L+GG + + +R G+K N+ + D + Sbjct 145 LRAAEKQLSQNIYERGVDDKG-FGRIRSKGDTALFGGHTTEDMKKRLGVKSNRPLADFLP 203 Query 200 STELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQV 259 + +AA T ++ + + H + VR + G PEELP + Sbjct 204 TLTIAAKNLATEMTNYNVENKDLYGEPSITREHIQNNQSVRAMLGN-RGIKPEELPAAE- 261 Query 260 SIKQLENSVKITEKK 274 IK+LE V EKK Sbjct 262 DIKKLERKVTRDEKK 276 >ref|ZP_06254376.1| DNA-damage-inducible protein D [Prevotella oris F0302] gb|EFB33114.1| DNA-damage-inducible protein D [Prevotella oris F0302] Length=308 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/255 (35%), Positives = 136/255 (53%), Gaps = 8/255 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +LGY+ + +F+ + RA +C++ +DDHF E+ MV +GS AKR + Sbjct 49 EVWFARELQTILGYARWENFLVAIHRAVASCKSQDINVDDHFREVTKMVDLGSGAKREVS 108 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+ EL +E L RL R++ Sbjct 109 DFMLTRYACYLIAQNGDPKKEEIAFAQSYFAVQTRKAELI-EERLNLL----SRLETRDK 163 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMG 199 L+ KQL + + GV F ++ G L+GG + + +R G+K N+ + D + Sbjct 164 LRAAEKQLSQNIYERGVDDK-GFGRIRSKGDTALFGGHTTEDMKKRLGVKSNRPLADFLP 222 Query 200 STELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQV 259 + +AA T ++ + + H + VR + G PEELP + Sbjct 223 TLTIAAKNLATEMTNYNVENKDLYGEPSITREHIQNNQSVRAMLGN-RGIKPEELPAAE- 280 Query 260 SIKQLENSVKITEKK 274 IK+LE V EKK Sbjct 281 DIKKLERKVTRDEKK 295 >ref|ZP_07322856.1| DNA-damage-inducible protein D [Prevotella disiens FB035-09AN] gb|EFL46573.1| DNA-damage-inducible protein D [Prevotella disiens FB035-09AN] Length=325 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 95/279 (34%), Positives = 145/279 (51%), Gaps = 13/279 (4%) Query 1 MNEHHQPFEEIK--LINANGAEQ---WSARQLGKLLGYSEYRHFIPVLTRAKEACENSGH 55 +N+H F EI + + NG E+ W AR+L +LGY+ + +F + RA E+C++ Sbjct 42 INQHTSAFNEITHYIESDNGKEKVEVWFARELQSVLGYARWENFTIAIGRAVESCKSQNI 101 Query 56 TIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRR 115 ++DHF E+ M+ + AKR +KD +L+R+ACYL+ QNGDP K IA Q YFA+QTRR Sbjct 102 NVNDHFREVTKMISLAKGAKREVKDYMLTRFACYLITQNGDPKKEEIAFAQGYFALQTRR 161 Query 116 QELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYG 175 EL E +Q+ RL R+ L+ KQL + GV F ++ G L+G Sbjct 162 AELI-AEHLQQV----SRLETRDRLRASEKQLSRNIYERGV-DDRGFGRIRSKGDTALFG 215 Query 176 GLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDV 235 G + + R G+K + + D + + +AA T +++ + +Q H Sbjct 216 GHTTEDMKLRLGIKSTRPLADFLPTLTIAAKNLATEMTNYNVEQKDLYGEQSITAEHIQN 275 Query 236 GRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 VRQ + + G PE LP P IK++E V EKK Sbjct 276 NVSVRQMLGQ-RGIKPENLP-PAEDIKKVERRVASNEKK 312 >ref|ZP_07962412.1| DNA-damage-inducible protein D [Prevotella salivae DSM 15606] gb|EFV04136.1| DNA-damage-inducible protein D [Prevotella salivae DSM 15606] Length=291 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/255 (34%), Positives = 135/255 (52%), Gaps = 8/255 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +LGY+ + +F+ + RA ++C++ ++DDHF E+ M+ IG KR + Sbjct 30 EVWFARELQSILGYARWENFLVAIHRAMDSCKSQNISVDDHFREVTKMISIGKGGKREVS 89 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+ EL +E L RL R++ Sbjct 90 DFMLTRYACYLIAQNGDPKKEEIAFAQSYFALQTRKAELI-EERLNLL----SRLETRDK 144 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMG 199 LK KQL + Q GV F ++ G L+GG + + R G+K + + D + Sbjct 145 LKVSEKQLSQNIFQRGVDDKG-FGRIRSKGDTALFGGYSTEEMKIRLGVKSKRPLADFLP 203 Query 200 STELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQV 259 + +AA T ++ + + H + VR + + G PE+LP P Sbjct 204 TLTIAAKNLATEMTNYNVESKDLQGEHPITREHVQNNKSVRDMLGQ-RGIKPEDLP-PAE 261 Query 260 SIKQLENSVKITEKK 274 IK++E V EKK Sbjct 262 DIKKIERKVVRDEKK 276 >ref|ZP_01772616.1| Hypothetical protein COLAER_01626 [Collinsella aerofaciens ATCC 25986] gb|EBA39331.1| Hypothetical protein COLAER_01626 [Collinsella aerofaciens ATCC 25986] Length=286 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 138/258 (53%), Gaps = 9/258 (3%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 +G E W AR L + LGY+++R+F + R+ +C+ + + HF E MV G AKR Sbjct 21 DGVEYWLARDLMEPLGYTQWRNFETAVKRSMASCDTNKMPVAAHFAEASKMVDAGI-AKR 79 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 A+KD L+RYACYL+ QNGDP KP IA Q YFA+QTRRQEL ++ F ++ +RL Sbjct 80 AVKDYKLTRYACYLIAQNGDPNKPEIALAQAYFAVQTRRQELI-EQRFAEI----QRLQA 134 Query 137 RNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILD 196 R+ L + KQL A + GV + FAI ++ G + L+GG + Q+ G+ K + D Sbjct 135 RHSLSDSEKQLSGIAFKRGV-DSKGFAIIKSKGDEALFGGRSTAEMKQQLGVPKRAALAD 193 Query 197 HMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPT 256 + + A + T + + Q H + VR ++ + G +PE LP Sbjct 194 RLADVLIKAKDLTNSMTAFNAEEHDLYGLDQIKQEHVENNTSVRGSLIDR-GIVPENLP- 251 Query 257 PQVSIKQLENSVKITEKK 274 P K+LE VK EKK Sbjct 252 PAEDTKKLERRVKTDEKK 269 >ref|YP_001249547.1| DNA-damage-inducible protein D [Legionella pneumophila str. Corby] ref|YP_003617390.1| DNA-damage-inducible protein D [Legionella pneumophila 2300/99 Alcoy] gb|ABQ54201.1| DNA-damage-inducible protein D [Legionella pneumophila str. Corby] gb|ADG23438.1| DNA-damage-inducible protein D [Legionella pneumophila 2300/99 Alcoy] Length=278 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 90/248 (36%), Positives = 143/248 (57%), Gaps = 9/248 (3%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E W AR + KLLGY ++ +F+ V+++AK ACE S H + DHF ++ MV++GS ++R Sbjct 23 GVEFWLARDIQKLLGYEKWDNFLNVVSKAKTACEISEHNVADHFADVGKMVELGSGSQRE 82 Query 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 + DI+L+RYACYL+ QNGDP K IA QTYFA QTR+ EL + ++L E E R+ R Sbjct 83 INDIMLTRYACYLIAQNGDPKKQEIAFAQTYFAYQTRKAELIE----QRLLEAE-RVTAR 137 Query 138 NELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDH 197 +L + K+L + + +FA+ ++ G L+G Q A+ ++ + ++ + D Sbjct 138 KKLSDTEKELSQVIYEQTNGNE-NFAVIRSKGDHALFGKSTQ-AMKKQWNVPDSRPLADF 195 Query 198 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTP 257 + L A F T K G+ ++Q + H VR+T+ + G T PE+LP P Sbjct 196 APTIILKAKDFATEITIFNAKEHGMTTEQAISKEHVTNNEAVRKTLIDRGIT-PEKLP-P 253 Query 258 QVSIKQLE 265 +K++E Sbjct 254 AEDVKKVE 261 >ref|ZP_06725400.1| DNA-damage-inducible protein D family protein [Bacteroides ovatus SD CC 2a] ref|ZP_06765092.1| DNA-damage-inducible protein D family protein [Bacteroides xylanisolvens SD CC 1b] gb|EFF55222.1| DNA-damage-inducible protein D family protein [Bacteroides ovatus SD CC 2a] gb|EFG15121.1| DNA-damage-inducible protein D family protein [Bacteroides xylanisolvens SD CC 1b] Length=262 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/257 (35%), Positives = 143/257 (55%), Gaps = 11/257 (4%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 + E + FE I + N E WSAR+L LLGYS++R+F+ ++ + K+AC+N+G I H Sbjct 6 IKELFKQFESI-VCEYNKVECWSARELYPLLGYSQWRNFLSIIEKVKDACKNAGENIAYH 64 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F ++ MV +GS A+R + +I L+RYACYLV QNGD K IA Q YFAIQTRR EL + Sbjct 65 FADVSKMVILGSGAEREVDNIFLTRYACYLVAQNGDSRKQEIAFAQNYFAIQTRRAELVE 124 Query 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 ++L E E R+ R +L E K L + GV FAI ++ G + L+ +D K Sbjct 125 ----QRLIEYE-RVQARTKLAETEKLLSGVLYERGVDN-QGFAIIRSKGDKALF-HMDTK 177 Query 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 + ++ G+ ++ + D + + + A F A T +++ + + H D VR Sbjct 178 MLKRKLGVPDSRPLADFLPTISIKAKDFAAEMTSVNVQQKDLYGQTAIENEHVDNNVAVR 237 Query 241 QTIQELG-GTMPEELPT 256 + +G G PE++P Sbjct 238 DML--VGRGIFPEQIPA 252 >ref|ZP_05285242.1| DNA-damage-inducible protein D [Bacteroides sp. 2_1_7] Length=275 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 90/262 (34%), Positives = 142/262 (54%), Gaps = 11/262 (4%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIP-VLTRAKEACENSGHTIDDHFEEILD 66 FE I G E WSAR+L LLGY+++ +FI V+ +AKEAC N+G I+DHF ++ Sbjct 13 FESISC-EVEGIECWSARELQPLLGYAKWDNFINNVVVKAKEACRNAGENIEDHFPDVGK 71 Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 ++ +G A++ + DI+L+RYACYL+ QNGD KP +A QTYFA+QTR+ E+ + Sbjct 72 VIIVGHGAEQQINDILLTRYACYLIAQNGDSRKPQVAFAQTYFAVQTRKAEVIEQRLL-- 129 Query 127 LREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 D +RL R +L + KQL + G+ FAI ++ G Q L+ L + + +R Sbjct 130 ---DCERLKAREKLSQTEKQLSGILYERGIDN-KGFAIIRSKGDQALF-NLSTQMLKKRM 184 Query 187 GLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQEL 246 + N+ I D + + + A A T ++ + + H D VR + + Sbjct 185 NVPTNRPIADFLPTISIKAKDLAAEMTNVNVQTKDLYGQSPIEKEHIDNNTAVRDMLLQ- 243 Query 247 GGTMPEELPTPQVSIKQLENSV 268 G PE+L +P IK+++ V Sbjct 244 RGIKPEQL-SPDEDIKKVQRRV 264 >ref|ZP_07867012.1| DNA-damage-inducible protein D [Capnocytophaga ochracea F0287] gb|EFS96910.1| DNA-damage-inducible protein D [Capnocytophaga ochracea F0287] Length=287 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 89/254 (35%), Positives = 137/254 (53%), Gaps = 8/254 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +LGY+ + +F + RA +C++ +DDHF E+ M++IG KR + Sbjct 30 EVWFARELQTILGYARWENFSVAIHRAVASCKSQQINVDDHFREVTKMIEIGKGGKREVV 89 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D +L+RYACYL+ QNGDP K +A Q+YFA+QTR+ EL +E L RL R++ Sbjct 90 DFMLTRYACYLIAQNGDPKKEEVAFAQSYFAVQTRKAELI-EERLNLL----SRLETRDK 144 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMG 199 L+ KQL + + GV FA ++ G L+GG + + R G+K N+ + D + Sbjct 145 LRSAEKQLSQNIYERGV-DDKGFARIRSKGDTALFGGHTTEDMKLRLGVKANRPLADFLP 203 Query 200 STELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQV 259 + +AA T ++ + ++ + H + VRQ + + G PEELP P Sbjct 204 TLTIAAKNLATEMTNYNVESNDLHGESAITHEHIQNNQTVRQMLGQ-RGIKPEELP-PAE 261 Query 260 SIKQLENSVKITEK 273 IK+LE V EK Sbjct 262 DIKKLERKVARDEK 275 >ref|YP_003141075.1| DNA-damage-inducible protein D [Capnocytophaga ochracea DSM 7271] gb|ACU92514.1| DNA-damage-inducible protein D [Capnocytophaga ochracea DSM 7271] Length=287 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 89/254 (35%), Positives = 138/254 (54%), Gaps = 8/254 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +LGY+ + +F + RA +C + +DDHF E+ MV++GS +KR + Sbjct 30 EVWFARELQTILGYARWENFSVAIHRAVASCMSQQINVDDHFREVTKMVELGSGSKREIM 89 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D +L+RYACYL+ QNGDP K +A Q+YFA+QTR+ EL +E L RL R++ Sbjct 90 DFMLTRYACYLIAQNGDPKKEEVAFAQSYFAVQTRKAELI-EERLNLL----SRLETRDK 144 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMG 199 L+ KQL + + GV FA ++ G L+GG + + R G+K N+ + D + Sbjct 145 LRSAEKQLSQNIYERGV-DDKGFARIRSKGDTALFGGHTTEDMKLRLGIKANRPLADFLP 203 Query 200 STELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQV 259 + +AA T ++ + ++ + H + VRQ + + G PEEL +P Sbjct 204 TLTIAAKNLATEMTNYNVESNDLHGESAITHEHVQNNQTVRQMLGQ-RGIKPEEL-SPAE 261 Query 260 SIKQLENSVKITEK 273 IK+LE V EK Sbjct 262 DIKKLERKVARDEK 275 >ref|ZP_07217720.1| DNA-damage-inducible protein D [Bacteroides sp. 20_3] gb|EFK61000.1| DNA-damage-inducible protein D [Bacteroides sp. 20_3] Length=275 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 11/262 (4%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIP-VLTRAKEACENSGHTIDDHFEEILD 66 FE I G E WSAR+L LLGY+++ +FI V+ +AKEAC N+G I+DHF ++ Sbjct 13 FESISC-EVEGIECWSARELQPLLGYAKWDNFINNVVVKAKEACRNAGENIEDHFPDVGK 71 Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 ++ +G A++ + DI+L+RYACYL+ QNGD KP +A QTYFA+QTR+ E+ + Sbjct 72 VIIVGHGAEQQINDILLTRYACYLIAQNGDSRKPQVAFAQTYFAVQTRKAEVIEQRLL-- 129 Query 127 LREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 D +RL R +L + KQL + G+ FAI ++ G Q L+ L + + +R Sbjct 130 ---DCERLKAREKLSQTEKQLSGILYERGIDN-KGFAIIRSKGDQALF-NLSTQMLKKRM 184 Query 187 GLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQEL 246 + N+ I D + + + A T ++ + + H D VR + + Sbjct 185 NVPTNRPIADFLPTISIKAKDLATEMTNVNVQAKDLYGQSPIEKEHIDNNTAVRDMLLQ- 243 Query 247 GGTMPEELPTPQVSIKQLENSV 268 G PE+L +P IK+++ + Sbjct 244 RGIKPEQL-SPNEDIKKVQRRI 264 >ref|ZP_05543836.1| DNA-damage-inducible protein D [Parabacteroides sp. D13] ref|ZP_06983954.1| DNA-damage-inducible protein D [Bacteroides sp. 3_1_19] gb|EEU52569.1| DNA-damage-inducible protein D [Parabacteroides sp. D13] gb|EFI10019.1| DNA-damage-inducible protein D [Bacteroides sp. 3_1_19] Length=275 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 88/262 (33%), Positives = 139/262 (53%), Gaps = 11/262 (4%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIP-VLTRAKEACENSGHTIDDHFEEILD 66 FE I G E WSAR+L LLGY+++ +FI V+ +AKEAC N+G + +HF ++ Sbjct 13 FESISC-EVEGIECWSARELQPLLGYAKWDNFINNVVVKAKEACRNAGEDVQNHFPDVGK 71 Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 MV IG ++ + DI+L+RYACYL+ QNGD KP +A QTYFA+QTR+ E+ + Sbjct 72 MVSIGYGVEKQIDDILLTRYACYLIAQNGDSRKPQVAFAQTYFAVQTRKAEVIEQRLL-- 129 Query 127 LREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 D +RL R +L + KQL + G+ FAI ++ G Q L+ L + + +R Sbjct 130 ---DCERLKAREKLSQTEKQLSGILYERGIDN-KGFAIIRSKGDQALF-NLSTQMLKKRM 184 Query 187 GLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQEL 246 + N+ I D + + + A T ++ + + H D VR + + Sbjct 185 NVPTNRPIADFLPTISIKAKDLATEMTNVNVQAKDLYGQSPIEKEHIDNNTAVRDMLLQ- 243 Query 247 GGTMPEELPTPQVSIKQLENSV 268 G PE+L +P IK+++ + Sbjct 244 RGIKPEQL-SPNEDIKKVQRRI 264 >ref|ZP_06241554.1| DNA-damage-inducible protein D [Victivallis vadensis ATCC BAA-548] gb|EFB01960.1| DNA-damage-inducible protein D [Victivallis vadensis ATCC BAA-548] Length=295 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 88/255 (34%), Positives = 135/255 (52%), Gaps = 9/255 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR L LGY + +F + RA ACE G ++ DHF ++ MV +GS A+R + Sbjct 26 EYWFARDLMARLGYIRWENFETAIKRAMTACEGVGLSVPDHFRDVTKMVPLGSGAERPIN 85 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D +L+RYACYL+ NGDP K IA Q+YFA+QTR+QE+ ++ +R+ R + Sbjct 86 DYMLTRYACYLIAMNGDPRKEEIAFAQSYFAVQTRKQEIIEERILYI-----ERMNAREQ 140 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMG 199 L +L + + GV + F+ ++ G Q L+ G K + QR G K+N+ + D + Sbjct 141 LAASEARLSKNIYERGV-DDSGFSRIRSKGDQALF-GYTTKQMKQRLGAKENRPLADFLP 198 Query 200 STELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQV 259 +AA A T ++++ ++ + H VR + + G PEELP P Sbjct 199 GLTIAAKNLAAEMTNYNVEQNDLHGEGSITREHVQNNSSVRGMLGQR-GIRPEELP-PAE 256 Query 260 SIKQLENSVKITEKK 274 I++LE VK EKK Sbjct 257 DIRKLERRVKSEEKK 271 >emb|CBL04567.1| hypothetical protein [Gordonibacter pamelaeae 7-10-1-b] Length=285 Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 136/258 (52%), Gaps = 8/258 (3%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 +G E W AR + + LGY + +F + RAK + S DHF E M++ G A+R Sbjct 23 SGVEFWYARDIMEFLGYRRWENFAVAVERAKVSGNASRTAGQDHFREATKMIEAGKGAQR 82 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 +KD L+RYACYL+ QNGDP K IA Q+YFA+QTR+QEL +E + L R+ + Sbjct 83 KVKDYKLTRYACYLIAQNGDPRKEEIAFAQSYFALQTRKQELI-EERMRAL----ARIAI 137 Query 137 RNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILD 196 R +L E K+L A + GV A FA ++ G L+GG + +R G+K ++ + D Sbjct 138 RGQLTEAEKELSRIAYERGVDGA-GFARIRSKGDAALFGGHTTADMKKRLGVKGSRPLAD 196 Query 197 HMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPT 256 H+ S LAA T ++ ++ ++ H VR + G PEELP Sbjct 197 HLPSVTLAAKQLATEMTNHNVEGKDLHGERPIAEEHVQNNVGVRDLLGRR-GIRPEELP- 254 Query 257 PQVSIKQLENSVKITEKK 274 P+ +++LE V + ++ Sbjct 255 PEEDVRRLERRVTVETRR 272 >ref|YP_001944467.1| DNA-damage-inducible protein D [Chlorobium limicola DSM 245] gb|ACD91488.1| DNA-damage-inducible protein D [Chlorobium limicola DSM 245] Length=284 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 140/258 (54%), Gaps = 11/258 (4%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 E W AR L LLGY+++ +F+ V+++AK ACE SGH + DHF ++ +++ A + Sbjct 23 AVEYWLARDLQHLLGYTKWDNFVSVVSKAKTACELSGHKVSDHFADVGKTIRMPKGATKE 82 Query 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 + DI+L+RYACYL+ QNGD K IA QTYFAIQTRR E+ + ++L E E R+ R Sbjct 83 VSDIMLTRYACYLIAQNGDSRKQEIAFAQTYFAIQTRRAEVIE----QRLLEAE-RVSAR 137 Query 138 NELKEHNKQLVEAA-QQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILD 196 +L K+L +Q G + +FA+ ++ G Q L+G Q A+ + + + D Sbjct 138 KKLSATEKELSGVIYEQTG--STENFALIRSKGDQALFGKSTQ-AMKAEWNVPDKRPLAD 194 Query 197 HMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPT 256 + L A F T + G+ S+ Q +T H + VR+ + E G PE LP Sbjct 195 FAPTIILKAKDFATEITIFNAREHGMKSEGQISTEHITNNKAVRKILLE-RGIRPESLP- 252 Query 257 PQVSIKQLENSVKITEKK 274 P +K+ E + EKK Sbjct 253 PAEDVKKDERHLASEEKK 270 >ref|ZP_06076245.1| DNA-damage-inducible protein D [Bacteroides sp. 2_1_33B] gb|EEY83917.1| DNA-damage-inducible protein D [Bacteroides sp. 2_1_33B] Length=275 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/250 (33%), Positives = 135/250 (54%), Gaps = 10/250 (4%) Query 20 EQWSARQLGKLLGYSEYRHFIP-VLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRAL 78 E WSAR+L LLGY+++ +FI V+ +AKEAC N+G + +HF ++ MV IG ++ + Sbjct 24 ECWSARELQPLLGYAKWDNFINNVVVKAKEACRNAGEDVQNHFPDVGKMVSIGYGVEKQI 83 Query 79 KDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRN 138 DI+L+RYACYL+ QNGD KP +A QTYFA+QTR+ E+ + D +RL R Sbjct 84 DDILLTRYACYLIAQNGDSRKPQVAFAQTYFAVQTRKAEVIEQRLL-----DCERLKARE 138 Query 139 ELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHM 198 +L + KQL + G+ FAI ++ G Q L+ L + + +R + N+ I D + Sbjct 139 KLSQTEKQLSGILYERGIDN-KGFAIIRSKGDQALF-NLSTQMLKKRMNVPTNRPIADFL 196 Query 199 GSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQ 258 + + A T ++ + + H D VR + + G PE+L +P Sbjct 197 PTISIKAKDLATEMTNVNVQAKDLYGQSPIEKEHIDNNTAVRDMLLQ-RGIKPEQL-SPN 254 Query 259 VSIKQLENSV 268 IK+++ + Sbjct 255 EDIKKVQRRI 264 >gb|EFK97322.1| DNA-damage-inducible protein D [sediment metagenome] Length=259 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 89/252 (35%), Positives = 138/252 (54%), Gaps = 10/252 (3%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE G E W AR L +LLGYS++ +F V+ +AK ACE SG +D+HF +I Sbjct 13 FESFVYYTNEGIEFWFARDLQQLLGYSKWDNFQNVIYKAKTACELSGEDVDNHFADIGKT 72 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 +++ A + +KD +L+RYACYL+ QNGD +K IA QTYFA+QTRR EL + +++ Sbjct 73 IEMPKGASKEIKDTMLTRYACYLIAQNGDSSKEQIAFAQTYFAVQTRRAELIE----QKI 128 Query 128 REDEKRLFLRNELKEHNKQLVEAA-QQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 E E R+ R +LK K+L +Q G + +F + ++ G L+G Q+ + R Sbjct 129 LEIE-RVQAREKLKNTEKELSSVIYEQTG--SDKNFGLIRSKGDAALFGRTTQQ-MKDRW 184 Query 187 GLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQEL 246 +K ++ + DHM + L A F T K + S+++ + H R VR+T+ Sbjct 185 DIKDSKPLADHMPTILLKAKDFATEITIYNTKSKNMRSEREISDEHITNNRSVRKTLIS- 243 Query 247 GGTMPEELPTPQ 258 G +PE L + Sbjct 244 RGIVPENLSAEE 255 >ref|YP_003304538.1| DNA-damage-inducible protein [Sulfurospirillum deleyianum DSM 6946] gb|ACZ12503.1| DNA-damage-inducible protein [Sulfurospirillum deleyianum DSM 6946] Length=269 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 136/260 (52%), Gaps = 28/260 (10%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 NG W A +L +LGY+EY+ F+ + +A C + I HF + + +N Sbjct 24 NGIRYWLASELANMLGYTEYKTFLKSINKAMTVCTSLNMQIISHF------IPLANN--- 74 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEK--RL 134 D L+R+AC+L+ N D K +A Q YFA LAD A +L + E+ R+ Sbjct 75 ---DFKLTRFACFLITMNADIKKEKVAKAQIYFA------SLAD--AISELMQAEQIERI 123 Query 135 FLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKI 194 +R EL NK L A AGV ++A+F N GY G+Y + + + KG++ K Sbjct 124 EIREELTNKNKSLAATANMAGV---ENYALFNNAGYMGMYN-MSFNDLKKVKGIEGTTKS 179 Query 195 -LDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEE 253 LD MG ELAANLFR ++TE K+K D + ++ T +VG+KVR + + G PE Sbjct 180 PLDFMGKRELAANLFRISETEAKIKSDHIYGQKNLENTAKEVGKKVRNIMIDNDGVRPEM 239 Query 254 LPTPQVSIKQLENSVKITEK 273 L QV++ ++ ++K EK Sbjct 240 LA-RQVALSDVKKNIKKVEK 258 >gb|ADZ11379.1| DNA-damage-inducible protein D [Riemerella anatipestifer RA-GD] Length=316 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/248 (38%), Positives = 137/248 (55%), Gaps = 17/248 (6%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE+ K NG W A L ++L Y + F VL RA +A + +++ IL Sbjct 15 FEDFK--QENGITYWWASDLMRMLAYPNMKSFQKVLDRATKAFVSLNIP---YYDNILPE 69 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + N +D L+R+ACY+VV NGDP K +A Q YFA QTR+ EL + + Sbjct 70 QRTIDN--NTFQDFKLTRFACYMVVMNGDPKKIEVAQAQAYFAQQTRKFEL-----YIEN 122 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 ++ RL +R EL E NK L + A V D+A F N GY G+Y + + ++R Sbjct 123 HQEIDRLLIREELTEGNKSLNSTLKHAKVQ---DYAKFTNAGYLGMYNMRNWELANKRNV 179 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 K +K++D MG TELAANLFR TQTEE++K G+ + TH++VG++VR+ I++ Sbjct 180 --KKEKLMDSMGRTELAANLFRVTQTEERIKSKGIQGQHNLEATHYEVGKEVREIIKKNV 237 Query 248 GTMPEELP 255 G PE LP Sbjct 238 GKNPENLP 245 >ref|YP_004046615.1| DNA-damage-inducible protein [Riemerella anatipestifer DSM 15868] gb|ADQ83109.1| DNA-damage-inducible protein [Riemerella anatipestifer DSM 15868] gb|EFT36342.1| predicted DNA-damage-inducible protein [Riemerella anatipestifer RA-YM] gb|AEB71663.1| DNA-damage-inducible protein D [Riemerella phage RAP44] Length=274 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/248 (38%), Positives = 137/248 (55%), Gaps = 17/248 (6%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE+ K NG W A L ++L Y + F VL RA +A + +++ IL Sbjct 15 FEDFK--QENGITYWWASDLMRMLAYPNMKSFQKVLDRATKAFVSLNIP---YYDNILPE 69 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + N +D L+R+ACY+VV NGDP K +A Q YFA QTR+ EL + + Sbjct 70 QRTIDN--NTFQDFKLTRFACYMVVMNGDPKKIEVAQAQAYFAQQTRKFEL-----YIEN 122 Query 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 ++ RL +R EL E NK L + A V D+A F N GY G+Y + + ++R Sbjct 123 HQEIDRLLIREELTEGNKSLNSTLKHAKVQ---DYAKFTNAGYLGMYNMRNWELANKRNV 179 Query 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 K +K++D MG TELAANLFR TQTEE++K G+ + TH++VG++VR+ I++ Sbjct 180 --KKEKLMDSMGRTELAANLFRVTQTEERIKSKGIQGQHNLEATHYEVGKEVREIIKKNV 237 Query 248 GTMPEELP 255 G PE LP Sbjct 238 GKNPENLP 245 >ref|YP_003848372.1| DNA-damage-inducible protein D [Gallionella capsiferriformans ES-2] gb|ADL56608.1| DNA-damage-inducible protein D [Gallionella capsiferriformans ES-2] Length=280 Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 144/258 (55%), Gaps = 11/258 (4%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E W AR L LLGY+E+R+F ++ +AK A E S H + DHF ++ +++ A++ Sbjct 23 GVEFWLARDLQYLLGYAEWRNFTAIIAKAKIAGEMSQHAVLDHFVDVNKTIQMPKGAEKE 82 Query 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 ++D++LSRYACYL+ QNGDP K IA QTYFAIQTRR EL + ++L E E R+ R Sbjct 83 VEDMMLSRYACYLIAQNGDPRKQEIAFAQTYFAIQTRRAELIE----QRLLETE-RISAR 137 Query 138 NELKEHNKQLVEAA-QQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILD 196 +L K+L + +Q G DFA+ +N G L+G Q A+ + + N+ + D Sbjct 138 KKLTATEKELSQVIYEQTG--GNQDFALIRNKGDHALFGKSTQ-AMKLQWQVPDNRTLAD 194 Query 197 HMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPT 256 + L A F A T +++ + ++ ++ H VR+T+ E G PE LP Sbjct 195 FAPTIVLKAKDFAAEITIFNARQNRLANEGAISSEHVTNNEAVRKTLLE-RGIRPESLPA 253 Query 257 PQVSIKQLENSVKITEKK 274 + +K++E + EKK Sbjct 254 SE-DVKKVERRLASEEKK 270 >ref|YP_003249297.1| DNA-damage-inducible protein D [Fibrobacter succinogenes subsp. succinogenes S85] gb|ACX74815.1| DNA-damage-inducible protein D [Fibrobacter succinogenes subsp. succinogenes S85] gb|ADL26365.1| putative DNA-damage-inducible protein D [Fibrobacter succinogenes subsp. succinogenes S85] Length=278 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/267 (32%), Positives = 142/267 (53%), Gaps = 11/267 (4%) Query 8 FEEIKLINAN--GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 FE+ + I G E WSAR L LLGY+++ F + +AKEAC+N+G +DDHF Sbjct 10 FEKFQAIACEYQGVECWSARDLSMLLGYTKWERFSNAIEKAKEACKNAGEIVDDHFPGAG 69 Query 66 DMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFK 125 M+ + A R + D +L+RYACYL+ QNGD KP I+ Q YFA+QTR E+ +D Sbjct 70 KMIHLAKGAVREVDDYMLTRYACYLIAQNGDSRKPEISFAQNYFAVQTRVAEIVED---- 125 Query 126 QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQR 185 ++ E E R+ R +L K L + GV + FA+ ++ G Q L+ +D + ++ Sbjct 126 RIHELE-RVQAREKLAHTEKVLSGVLFERGV-DSKGFAVIRSKGDQALF-NIDTNLLKRK 182 Query 186 KGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQE 245 + ++ + D + + + A A T K + + +++ H D R VR+ + + Sbjct 183 YNVPASRPLADFLPTVSIKAKDLAAEMTSVKTQTKNLFGQKKIEKEHVDNNRAVRKMLLD 242 Query 246 LGGTMPEELPTPQVSIKQLENSVKITE 272 G +PE LP + +K++ +K T+ Sbjct 243 -RGIVPENLPASE-DVKKVVRRLKRTD 267 >ref|ZP_03047563.1| DNA-damage-inducible protein D [Escherichia coli E22] ref|YP_002328558.1| predicted DNA-damage-inducible protein [Escherichia coli O127:H6 str. E2348/69] gb|EDV80493.1| DNA-damage-inducible protein D [Escherichia coli E22] emb|CAS08543.1| predicted DNA-damage-inducible protein [Escherichia coli O127:H6 str. E2348/69] Length=280 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 129/258 (50%), Gaps = 18/258 (6%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 NG W A L +LGY+ + + +A C + + D+F I ++ Sbjct 30 NGVTYWFASDLAMMLGYNGMDQILKAINKATSVCVSLDIPVYDNF--------IQMPSEN 81 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 A D L+R+ACYL+V NGD + +A Q YFA A+ + R++L Sbjct 82 AKNDFKLTRFACYLIVMNGDISNQKVANAQAYFA-----GLAAEIHTTYHNHDAVNRVYL 136 Query 137 RNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGL-KKNQKIL 195 R E+ K L A + GV D+ +FQN GY+G+Y ++ + RKGL KK+ +L Sbjct 137 RGEITSREKTLSHVAHKHGV---VDYGLFQNAGYRGMYN-MNLSQLKARKGLTKKDGTML 192 Query 196 DHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP 255 D MGS ELAAN+FR TQTE +++ + + Q VGR VR + GT PE + Sbjct 193 DFMGSEELAANIFRITQTEARIRNQNLKGQSQLENAAETVGRSVRNVMISNTGTAPENIK 252 Query 256 TPQVSIKQLENSVKITEK 273 Q I+++ +S+K T K Sbjct 253 LSQEKIQKVRSSIKKTHK 270 >ref|YP_001295180.1| DNA-damage-inducible protein D [Flavobacterium psychrophilum JIP02/86] emb|CAL42360.1| DNA-damage-inducible protein D [Flavobacterium psychrophilum JIP02/86] Length=281 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 143/258 (55%), Gaps = 11/258 (4%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E W AR L LLGY+++ +F+ V+++AK ACE SG I+ HF ++ +++ A++ Sbjct 23 GIEFWLARDLQHLLGYTKWDNFVGVISKAKTACEISGEDIEHHFADVGKTIQMPKGAEKE 82 Query 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 ++DI+L+RYACYL+ QNGD K IA Q YFAIQTR+ EL + + + +R+ R Sbjct 83 IQDIMLTRYACYLIAQNGDSRKESIAFAQRYFAIQTRKAELIEQKIL-----EYERVQAR 137 Query 138 NELKEHNKQLVEAA-QQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILD 196 N+LK K+L + +Q G +FA+ ++ G L+ Q+ + + GL + + D Sbjct 138 NKLKVTEKELSQVIFEQTG--GNQNFALIRSKGDTALFNRTTQQ-MKVKWGLASTKPLAD 194 Query 197 HMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPT 256 H+ + L A F T K+ + S+ Q + H + VR T+ G +PE+L Sbjct 195 HIPTILLKAKDFATEITIFNAKQHKMKSENQISKEHITNNKSVRSTLLS-RGIVPEDL-A 252 Query 257 PQVSIKQLENSVKITEKK 274 P+ I ++E + EKK Sbjct 253 PEEDISKIERRLVSDEKK 270 >ref|ZP_08135432.1| DNA-damage-inducible protein D [Prevotella multiformis DSM 16608] gb|EGC20737.1| DNA-damage-inducible protein D [Prevotella multiformis DSM 16608] Length=244 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 6/187 (3%) Query 19 AEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRAL 78 E W AR+L +LGY+ + +F+ + RA ++C+ G +DDHF E+ M++IG KR + Sbjct 29 VEVWFARELQTILGYARWENFLVAIRRAVDSCKAQGINVDDHFREVTKMIEIGKGGKREV 88 Query 79 KDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRN 138 D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+ EL +E L RL R+ Sbjct 89 SDFMLTRYACYLIAQNGDPKKEEIAFAQSYFAVQTRKAELI-EERLNLL----SRLETRD 143 Query 139 ELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHM 198 +L+ KQL + Q GV F ++ G L+GG + + R G+K N+ + D + Sbjct 144 KLRMAEKQLSQNIYQRGV-DDKGFGRIRSKGDTALFGGHTTEDMKNRLGVKSNRPLADFL 202 Query 199 GSTELAA 205 + +AA Sbjct 203 PTLTIAA 209 >ref|YP_383048.1| DNA-damage-inducible protein D [Geobacter metallireducens GS-15] gb|ABB30323.1| DNA-damage-inducible protein D [Geobacter metallireducens GS-15] Length=123 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 81/111 (72%), Gaps = 0/111 (0%) Query 3 EHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFE 62 +H PFE+IK N G+E WS+R ++L Y++YR+F V+T+A+ AC NSG IDDHF Sbjct 12 KHVSPFEQIKRTNDAGSEFWSSRDFAQILDYADYRNFEQVVTKARTACFNSGQRIDDHFV 71 Query 63 EILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQT 113 ++ +MV +GS AKR +K + LSRYACYL+VQN DP+K ++A GQTY + T Sbjct 72 DVTEMVDLGSGAKRQVKSVFLSRYACYLIVQNADPSKEIVALGQTYCRLPT 122 >ref|YP_379426.1| hypothetical protein Cag_1121 [Chlorobium chlorochromatii CaD3] gb|ABB28383.1| hypothetical protein Cag_1121 [Chlorobium chlorochromatii CaD3] Length=412 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 61/108 (56%), Positives = 76/108 (70%), Gaps = 0/108 (0%) Query 3 EHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFE 62 +H FE+I+ + NG E WSAR L K+L YSE+RHF+PV+ R KEAC NSG I DHFE Sbjct 8 QHIGLFEKIRQTDENGNEFWSARDLSKVLEYSEFRHFLPVIERGKEACINSGQQIADHFE 67 Query 63 EILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFA 110 +IL+M+ R ++ I LSRYACYL+VQN D K V+A GQTYFA Sbjct 68 DILEMITTDKTEHREIEGIKLSRYACYLIVQNADHGKEVVALGQTYFA 115 >ref|ZP_04547601.1| DNA-damage-inducible protein D [Bacteroides sp. D1] ref|ZP_06082440.1| DNA-damage-inducible protein D [Bacteroides sp. 2_1_22] gb|EEO48894.1| DNA-damage-inducible protein D [Bacteroides sp. D1] gb|EEZ05855.1| DNA-damage-inducible protein D [Bacteroides sp. 2_1_22] Length=229 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 80/228 (35%), Positives = 128/228 (56%), Gaps = 10/228 (4%) Query 30 LLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACY 89 +LGYS++R+F+ ++ + K+AC+N+G I HF ++ MV +GS A+R + +I L+RYACY Sbjct 1 MLGYSQWRNFLSIIEKVKDACKNAGENIAYHFADVSKMVILGSGAEREVDNIFLTRYACY 60 Query 90 LVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVE 149 LV QNGD K IA Q YFAIQTRR EL + ++L E E R+ R +L E K L Sbjct 61 LVAQNGDSRKQEIAFAQNYFAIQTRRAELVE----QRLIEYE-RVQARTKLAETEKLLSG 115 Query 150 AAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFR 209 + GV FAI ++ G + L+ +D K + ++ G+ ++ + D + + + A F Sbjct 116 VLYERGVDN-QGFAIIRSKGDKALF-HMDTKMLKRKLGVPDSRPLADFLPTISIKAKDFA 173 Query 210 ATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG-GTMPEELPT 256 A T +++ + + H D VR + +G G PE++P Sbjct 174 AEMTSVNVQQKDLYGQTAIENEHVDNNVAVRDML--VGRGIFPEQIPA 219 >ref|ZP_08446631.1| DNA-damage-inducible protein D family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gb|EGJ56149.1| DNA-damage-inducible protein D family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length=274 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 83/257 (32%), Positives = 134/257 (52%), Gaps = 9/257 (3%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E WSAR L LLGY+++R+F ++ +AK +C + G I HF ++ + + A++ Sbjct 22 GIECWSARDLQTLLGYAQWRNFELIIQKAKVSCSSVGENIAYHFADVSKTIPMPKGAEKQ 81 Query 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 + D++L+RYACYL+ QNGD K I+ QTYFA+QTR+ E+ + ++L E E R+ R Sbjct 82 VDDLLLTRYACYLIAQNGDNRKEEISFAQTYFAVQTRKAEIVE----QRLLEYE-RVRAR 136 Query 138 NELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDH 197 +L + KQL + GV FAI ++ G Q L+ L + ++ G N+ + D Sbjct 137 EKLSQTEKQLSGILYERGV-DDKGFAIIRSKGDQALF-NLTTAQLKRKIGAPDNRPVADF 194 Query 198 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTP 257 + + + A A T + + H D VR + + G PE+LP P Sbjct 195 LPTISIKAKDLAAEMTSVNVVGKDLKGMSPIQKEHIDNNTAVRNMLID-RGIAPEQLP-P 252 Query 258 QVSIKQLENSVKITEKK 274 IK+++ + EKK Sbjct 253 AEDIKKVQRKLNKEEKK 269 >ref|ZP_03726035.1| DNA-damage-inducible protein [Opitutaceae bacterium TAV2] gb|EEG19939.1| DNA-damage-inducible protein [Opitutaceae bacterium TAV2] Length=116 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 54/99 (54%), Positives = 78/99 (78%), Gaps = 5/99 (5%) Query 48 EACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQT 107 ++C NSG ++DHF E+ DMV IGS A+R LK +++SRYACYLV+QN DPAK ++A GQT Sbjct 10 QSCFNSGQRVEDHFVEVTDMVGIGSGARRPLKTVMMSRYACYLVIQNADPAKEIVAQGQT 69 Query 108 YFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQ 146 YFA+QTRRQEL+D++ E+++RL +R++L+ HN + Sbjct 70 YFALQTRRQELSDEQV-----EEQRRLAIRSDLRRHNSR 103 >ref|ZP_08171239.1| DNA-damage-inducible protein D family protein [Prevotella denticola CRIS 18C-A] gb|EGC87385.1| DNA-damage-inducible protein D family protein [Prevotella denticola CRIS 18C-A] Length=199 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 11/190 (5%) Query 3 EHHQPFEEI-KLINANGAEQ----WSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTI 57 ++ F+ I + I ++ +E+ W AR+L +LGY+ + +F+ + RA ++C+ G + Sbjct 8 QYKSSFDSIVRYIESDDSEEQVEVWFARELQTILGYARWENFLVAIRRAVDSCKAQGINV 67 Query 58 DDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQE 117 DDHF E+ M++IG KR + D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+ E Sbjct 68 DDHFREVTKMIEIGKGGKREVSDFMLTRYACYLIAQNGDPKKEEIAFAQSYFAVQTRKAE 127 Query 118 LADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGL 177 L +E L RL R++L+ KQL + Q GV F ++ G L+GG Sbjct 128 LI-EERLNLL----SRLETRDKLRIAEKQLSQNIYQRGVDDKG-FGRIRSKGDMTLFGGH 181 Query 178 DQKAIHQRKG 187 + + R G Sbjct 182 TTEDMKNRLG 191 >ref|ZP_07269840.1| DNA-damage-inducible protein D [Streptomyces sp. SPB78] gb|EFK98208.1| DNA-damage-inducible protein D [Streptomyces sp. SPB78] Length=288 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 58/113 (51%), Positives = 71/113 (62%), Gaps = 0/113 (0%) Query 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF+ ++ A+G + WSAR L +LLGY + F + RA ACENSGH DHF Sbjct 16 PFDAVRNTRADGTDFWSARDLQQLLGYERWERFETAVERAIAACENSGHEPKDHFRGAAK 75 Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELA 119 V +GS A RA+ D LSRYA YLV NGDP K IAA QTYFA++TR E+A Sbjct 76 KVSLGSGATRAVIDWHLSRYAAYLVAMNGDPRKAEIAAAQTYFAVKTREAEIA 128 >ref|ZP_06826956.1| DNA-damage-inducible protein D [Streptomyces sp. SPB74] gb|EDY46757.1| DNA-damage-inducible protein D [Streptomyces sp. SPB74] Length=337 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 60/117 (51%), Positives = 72/117 (61%), Gaps = 0/117 (0%) Query 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF+ + A+GA+ WSAR L +LLGY + F + RA ACENSGH DHF Sbjct 65 PFDATRNTRADGADFWSARDLQELLGYERWERFETAVERAIAACENSGHEPKDHFRGAAK 124 Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEA 123 V +GS A RA+ D LSRYA YLV NGDP K IAA QTYFA++TR E+A A Sbjct 125 KVSLGSGATRAVIDWHLSRYAAYLVAMNGDPRKDQIAAAQTYFAVKTREAEIAATRA 181 >ref|ZP_04539593.1| DNA-damage-inducible protein D [Bacteroides sp. 9_1_42FAA] gb|EEO62529.1| DNA-damage-inducible protein D [Bacteroides sp. 9_1_42FAA] Length=211 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 7/214 (3%) Query 30 LLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACY 89 LLGY+++R+F ++ +AK AC N+G + HF ++ M+ + A+R + DI L+RYACY Sbjct 4 LLGYTQWRNFEAIINKAKAACTNAGEDVTYHFADVSKMISLPKGAEREIDDIYLTRYACY 63 Query 90 LVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVE 149 L QNGD KP IA Q YFA+QTRR EL + D +R+ R +L E K L Sbjct 64 LTAQNGDARKPAIAFAQNYFAVQTRRAELVEQHLL-----DYERVQARTKLAETEKLLSG 118 Query 150 AAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFR 209 + GV + FAI ++ G + L+ LD + + G ++ ++D + + + A F Sbjct 119 VFYERGV-DSKGFAIIRSKGDKALF-HLDTALLKCKLGAPHSRPLVDFLPTISIKAKDFA 176 Query 210 ATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTI 243 A T +++ + + H + VR + Sbjct 177 AEMTSINVQQKDLYGQSSIEKEHIENNTAVRNMM 210 >ref|ZP_06201199.1| conserved hypothetical protein [Bacteroides sp. D20] gb|EFA20106.1| conserved hypothetical protein [Bacteroides sp. D20] Length=223 Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 7/201 (3%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E WSAR+L +LGY++++ F VL +AKEAC+N+G +HF I + + A + Sbjct 23 GVECWSARELYPILGYAKWQTFENVLGKAKEACQNAGVETSNHFTGISKTILMPKGASKD 82 Query 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 ++D +L+RYACYLV QNGDP K IA Q YFA+QTR E+ + D R+ R Sbjct 83 IEDFMLTRYACYLVAQNGDPRKSEIAFAQNYFAVQTRVAEVIEQRLL-----DYDRVQAR 137 Query 138 NELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDH 197 ++L E K+L + GV F I ++ G Q L+ ++ + ++ G + + + D Sbjct 138 HKLAETEKRLFGVLYERGV-DDKGFGIIRSKGDQALF-RMNTAMLKRKLGAPEKRALADF 195 Query 198 MGSTELAANLFRATQTEEKLK 218 + + + A F A T L+ Sbjct 196 LPTLGIKAKDFAAEMTSSVLR 216 >ref|ZP_02069650.1| hypothetical protein BACUNI_01064 [Bacteroides uniformis ATCC 8492] ref|ZP_07937168.1| dinD protein [Bacteroides sp. 4_1_36] gb|EDO55392.1| hypothetical protein BACUNI_01064 [Bacteroides uniformis ATCC 8492] gb|EFV27670.1| dinD protein [Bacteroides sp. 4_1_36] Length=223 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 7/201 (3%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E WSAR+L +LGY++++ F VL +AKEAC+N+G +HF I + + A + Sbjct 23 GVECWSARELYPILGYAKWQTFENVLGKAKEACQNAGVETSNHFTGISKTILMPKGASKD 82 Query 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 ++D +L+RYACYLV QNGDP K IA Q YFA+QTR E+ + D R+ R Sbjct 83 IEDFMLTRYACYLVAQNGDPRKSEIAFAQNYFAVQTRVAEVIEQRLL-----DYDRVQAR 137 Query 138 NELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDH 197 ++L E K+L + GV F I ++ G Q L+ ++ + ++ G + + + D Sbjct 138 HKLAETEKRLSGVLYERGV-DDKGFGIIRSKGDQALF-RMNTAMLKRKLGAPEKRALADF 195 Query 198 MGSTELAANLFRATQTEEKLK 218 + + + A F A T L+ Sbjct 196 LPTLGIKAKDFAAEMTSSVLR 216 >ref|ZP_01791795.1| DNA-damage-inducible protein d [Haemophilus influenzae PittHH] gb|EDK10580.1| DNA-damage-inducible protein d [Haemophilus influenzae PittHH] Length=223 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 20/200 (10%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 NG W A L +LGY++ + + + +A C N I D+F I + + Sbjct 31 NGITYWYASDLAMMLGYNDMQAILKAMNKAYAVCNNLDIPIVDNF--------IQTQSPN 82 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD-EAFKQLREDEKRLF 135 D ++R+ACYL V NG+ + P +AA Q YFA +LAD+ Q ++ R++ Sbjct 83 TPSDFKMTRFACYLTVMNGNISNPKVAAAQAYFA------KLADEIHTLCQSADEVDRVY 136 Query 136 LRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQ-KI 194 LR ++ + K L A + GV ++A FQN GY+G+Y ++ K++ +KGL ++ + Sbjct 137 LRGDISDREKSLSHIAHKHGV---ENYAFFQNAGYRGMY-NMNIKSLKNKKGLFDDKASL 192 Query 195 LDHMGSTELAANLFRATQTE 214 LD M + ELAAN+FR TQTE Sbjct 193 LDFMDNEELAANIFRVTQTE 212 >ref|ZP_04554886.1| DNA-damage-inducible protein D [Bacteroides sp. D4] gb|EEO47351.1| DNA-damage-inducible protein D [Bacteroides dorei 5_1_36/D4] Length=211 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 7/214 (3%) Query 30 LLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACY 89 LLGY+++R+F ++ +AK AC N+G + HF ++ M+ + A+R + DI L+RYACY Sbjct 4 LLGYTQWRNFEAIINKAKAACTNAGEDVTYHFADVSKMISLPKGAEREIDDIYLTRYACY 63 Query 90 LVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVE 149 L QNGD KP IA Q YFA+QTRR +L + D +R+ R +L E K L Sbjct 64 LTAQNGDARKPAIAFAQNYFAVQTRRAKLVEQHLL-----DYERVQARTKLAETEKLLSG 118 Query 150 AAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFR 209 + GV + FAI ++ G + L+ LD + + G ++ ++D + + + A F Sbjct 119 VFYERGV-DSKGFAIIRSKGDKALF-RLDTALLKCKLGAPHSRPLVDFLPTISIKAKDFA 176 Query 210 ATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTI 243 A T +++ + + H + VR + Sbjct 177 AEMTSINVQQKDLYGQSSIEKEHIENNTAVRNMM 210 >ref|ZP_03300702.1| hypothetical protein BACDOR_02071 [Bacteroides dorei DSM 17855] gb|EEB25431.1| hypothetical protein BACDOR_02071 [Bacteroides dorei DSM 17855] Length=207 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 7/213 (3%) Query 31 LGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYL 90 +GY+++R+F ++ +AK AC N+G + HF ++ M+ + A+R + DI L+RYACYL Sbjct 1 MGYTQWRNFEAIINKAKAACTNAGEDVTYHFADVSKMISLPKGAEREIDDIYLTRYACYL 60 Query 91 VVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEA 150 QNGD KP IA Q YFA+QTRR EL + D +R+ R +L E K L Sbjct 61 TAQNGDARKPAIAFAQNYFAVQTRRAELVEQHLL-----DYERVQARTKLAETEKLLSGV 115 Query 151 AQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRA 210 + GV + FAI ++ G + L+ LD + + G ++ ++D + + + A F A Sbjct 116 FYERGV-DSKGFAIIRSKGDKALF-RLDTALLKCKLGAPHSRPLVDFLPTISIKAKDFAA 173 Query 211 TQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTI 243 T +++ + + H + VR + Sbjct 174 EMTSINVQQKDLYGQSSIEKEHIENNTAVRNMM 206 >ref|ZP_04578339.1| DNA-damage-inducible protein D [Oxalobacter formigenes OXCC13] gb|EEO29312.1| DNA-damage-inducible protein D [Oxalobacter formigenes OXCC13] Length=249 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 14/227 (6%) Query 31 LGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYL 90 LGY + F V+ R+ AC + + ++F E+ K + K + L+R+AC+L Sbjct 4 LGYDSWTSFNRVVNRSISACASLNVPVMENFMEM----KYRFDGK-DVSTYKLTRFACFL 58 Query 91 VVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDE-KRLFLRNELKEHNKQLVE 149 + N D KP + +T A +AD + + D +R+ +RNELK+ + L Sbjct 59 ITMNADSRKPEVLQAKTVLA------GIADALVEQAIHHDSVERIEVRNELKDGERFLSG 112 Query 150 AAQQAGVATATDFAIFQNHGYQGLYG-GLDQKAIHQRKGLKKNQKILDHMGSTELAANLF 208 A AG+ + +F IF++ GY+GLY L+ ++ ++KN+ + D MG +ELAANLF Sbjct 113 VAMSAGLQS-REFGIFRDAGYRGLYNMSLNDLIRYKGMTIEKNKTLYDFMGKSELAANLF 171 Query 209 RATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP 255 R TQT E++K + V + + T VG +VR + GG PE LP Sbjct 172 RVTQTTERIKNNNVKGLKNLSQTAKSVGTEVRNVMLRSGGLEPENLP 218 >ref|YP_004221595.1| DNA-damage-inducible protein [Bifidobacterium longum subsp. longum JCM 1217] dbj|BAJ67503.1| DNA-damage-inducible protein [Bifidobacterium longum subsp. longum JCM 1217] Length=197 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 85/150 (56%), Gaps = 5/150 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +GY + +F +TRAK+AC+NSG +++ HF + V +GS A R++ Sbjct 26 EYWYARELMTYMGYDRWENFSKAITRAKQACDNSGVSVESHFRDTTRDVTLGSGATRSIA 85 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D+ L+RYACYL+ QNGDP K +A Q+YFA+QTR+ E+ +Q + RL R Sbjct 86 DVKLTRYACYLIAQNGDPKKEEVALLQSYFAVQTRKTEI-----IEQRMGEISRLAGREA 140 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHG 169 L K+L Q TA + NH Sbjct 141 LATAEKKLYPYTQITHNKTAQEHMYTPNHA 170 >ref|NP_695378.1| DNA-damage-inducible protein [Bifidobacterium longum NCC2705] ref|YP_001955465.1| hypothetical protein BLD_1522 [Bifidobacterium longum DJO10A] gb|AAN24014.1| DNA-damage-inducible protein of Escherichia coli [Bifidobacterium longum NCC2705] gb|ACD98967.1| Hypothetical protein BLD_1522 [Bifidobacterium longum DJO10A] Length=187 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 85/150 (56%), Gaps = 5/150 (3%) Query 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +GY + +F +TRAK+AC+NSG +++ HF + V +GS A R++ Sbjct 26 EYWYARELMTYMGYDRWENFSKAITRAKQACDNSGVSVESHFRDTTRDVTLGSGATRSIA 85 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D+ L+RYACYL+ QNGDP K +A Q+YFA+QTR+ E+ +Q + RL R Sbjct 86 DVKLTRYACYLIAQNGDPKKEEVALLQSYFAVQTRKTEI-----IEQRMGEISRLAGREA 140 Query 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHG 169 L K+L Q TA + NH Sbjct 141 LATAEKKLYPYTQITHNKTAQEHMYTPNHA 170 >ref|YP_001304347.1| hypothetical protein BDI_3017 [Parabacteroides distasonis ATCC 8503] gb|ABR44725.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length=168 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/112 (48%), Positives = 76/112 (67%), Gaps = 2/112 (1%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIP-VLTRAKEACENSGHTIDDHFEEILD 66 FE I G E WSAR+L LLGY+++ +FI V+ +AKEAC N+G + +HF ++ Sbjct 13 FESISC-EVEGIECWSARELQPLLGYAKWDNFINNVVVKAKEACRNAGEDVQNHFPDVGK 71 Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQEL 118 MV IG ++ + DI+L+RYACYL+ QNGD K +A QTYFA+QTR+ E+ Sbjct 72 MVSIGYGVEKQIDDILLTRYACYLIAQNGDSRKLQVAFAQTYFAVQTRKAEV 123 >ref|ZP_07977352.1| DNA-damage-inducible protein D [Streptomyces sp. SA3_actG] ref|ZP_07984819.1| DNA-damage-inducible protein D [Streptomyces sp. SA3_actF] Length=269 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 56/109 (51%), Positives = 68/109 (62%), Gaps = 0/109 (0%) Query 11 IKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKI 70 ++ A+G + WSAR L +LLGY + F + RA ACENSGH DHF V + Sbjct 1 MRNTRADGTDFWSARDLQQLLGYERWERFETAVERAIAACENSGHEPKDHFRGAAKKVSL 60 Query 71 GSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELA 119 GS A RA+ D LSRYA YLV NGDP K IAA QTYFA++TR E+A Sbjct 61 GSGATRAVIDWHLSRYAAYLVAMNGDPRKAEIAAAQTYFAVKTREAEIA 109 >ref|XP_002959994.1| hypothetical protein VOLCADRAFT_101508 [Volvox carteri f. nagariensis] gb|EFJ38941.1| hypothetical protein VOLCADRAFT_101508 [Volvox carteri f. nagariensis] Length=211 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 8/208 (3%) Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 M+ +G A+R ++D+ L+RYACYLV QNGDP K +A QTYFA+QTR+QE+ + Sbjct 1 MIDLGKGAQREIEDVALTRYACYLVAQNGDPGKTEVAFAQTYFAVQTRKQEIIEQRLL-- 58 Query 127 LREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 D R+ R++L + K+L + GV FAI ++ G Q L+GG + + Sbjct 59 ---DVARVSARDKLSKSEKKLSGIIYERGVDDK-GFAIIRSKGDQALFGGFTTTDMKNKL 114 Query 187 GLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQEL 246 + N+ + D + + + A F T + + Q T H + + VR+ + E Sbjct 115 LVPDNRPLADFLPTLTIKAKDFATELTSHNTVEKDLKGETQITTEHVENNKAVRKMLIE- 173 Query 247 GGTMPEELPTPQVSIKQLENSVKITEKK 274 G PE+LP P +K+L+ ++ EKK Sbjct 174 RGVKPEQLP-PGEDVKKLQRKLESDEKK 200 >ref|YP_001784207.1| hypothetical protein HSM_0875 [Haemophilus somnus 2336] gb|ACA32551.1| hypothetical protein HSM_0875 [Haemophilus somnus 2336] Length=275 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 81/256 (31%), Positives = 129/256 (50%), Gaps = 18/256 (7%) Query 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 NG W A LGY + F V+ +A +C N I D+F +I D+V G R Sbjct 17 NGIRYWHAHDFMLHLGYESWNSFKSVINKAMSSCANLEIDIMDNFSQI-DIVFQG----R 71 Query 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRR--QELADDEAFKQLREDEKRL 134 +K LSR+AC+L+ + D K +A +T A + Q DD A + RL Sbjct 72 EVKSYKLSRFACFLITMHADSKKEQVAQAKTILAAVADKLVQNAIDDNAIQ-------RL 124 Query 135 FLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYG-GLDQKAIHQRKGLKKNQK 193 +R +L + + + +A+ AG+ F +F++ G++G+Y GL + H++ +K Sbjct 125 EIRKKLADGEQIMSASAKGAGL-LPEHFGLFKDAGFRGMYNMGLAELKRHKQMPDEKGT- 182 Query 194 ILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEE 253 + D MG+TELA N FR TQT E++K V T VG++VR + + G PE Sbjct 183 LYDFMGNTELAGNWFRVTQTAERIKSKNVRGLNALQNTASQVGKEVRDMMIKNSGIAPEH 242 Query 254 LPTPQVSIKQLENSVK 269 L Q +IK+++ ++K Sbjct 243 LELEQ-NIKEVKKTLK 257 >ref|ZP_08330970.1| DNA-damage-inducible protein D [gamma proteobacterium IMCC1989] gb|EGG92883.1| DNA-damage-inducible protein D [gamma proteobacterium IMCC1989] Length=78 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 54/72 (75%), Positives = 61/72 (84%), Gaps = 0/72 (0%) Query 198 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTP 257 MGSTELAAN FRATQTEEKLKRD V++K QAN THF+VG KVR+TIQELGGTMPE+LP P Sbjct 1 MGSTELAANRFRATQTEEKLKRDEVDNKTQANLTHFEVGAKVRETIQELGGTMPEDLPKP 60 Query 258 QVSIKQLENSVK 269 +SI QL + K Sbjct 61 DLSIPQLARAQK 72 >ref|ZP_07322979.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] gb|EFL46452.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] Length=106 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 49/93 (52%), Positives = 65/93 (69%), Gaps = 1/93 (1%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE++ + N E WSAR L LLGY +++F V+ +AKEAC N G ++DHF ++ M Sbjct 13 FEQVSCV-LNDVECWSARDLCSLLGYKLWQNFTKVINKAKEACVNVGQNVEDHFIDVNKM 71 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKP 100 V IGS A+R + DI+L+RYACYLV QNGDP KP Sbjct 72 VVIGSGAERQIDDIMLTRYACYLVAQNGDPRKP 104 >gb|EGF42122.1| DNA-damage-inducible protein D [Vibrio parahaemolyticus 10329] Length=97 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 54/76 (71%), Positives = 61/76 (80%), Gaps = 0/76 (0%) Query 197 HMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPT 256 HMGSTELAANLFRATQTEEKL RD V++K AN THF+VG KVR TI+ELGGTMPE+LPT Sbjct 19 HMGSTELAANLFRATQTEEKLNRDQVSNKAHANQTHFEVGAKVRATIEELGGTMPEDLPT 78 Query 257 PQVSIKQLENSVKITE 272 P+ I QL + K E Sbjct 79 PEKGIPQLARAQKKLE 94 >ref|ZP_05974407.1| DNA-damage-inducible protein D [Providencia rustigianii DSM 4541] gb|EFB70698.1| DNA-damage-inducible protein D [Providencia rustigianii DSM 4541] Length=62 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 50/61 (81%), Positives = 56/61 (91%), Gaps = 0/61 (0%) Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 MV IGS A+R LKD+ LSRYACYLVVQNGDP+KPVIAAGQ YFAIQTRRQELADD+AFK+ Sbjct 1 MVNIGSGAQRKLKDVTLSRYACYLVVQNGDPSKPVIAAGQIYFAIQTRRQELADDDAFKK 60 Query 127 L 127 + Sbjct 61 I 61 >ref|YP_002017820.1| DNA-damage-inducible protein D [Pelodictyon phaeoclathratiforme BU-1] gb|ACF43203.1| DNA-damage-inducible protein D [Pelodictyon phaeoclathratiforme BU-1] Length=241 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 54/258 (20%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E W AR L LLGYS++ +F+ V+++AK ACE SGH + DHF ++ +++ A + Sbjct 23 GVEYWLARDLQYLLGYSKWDNFVGVVSKAKTACELSGHKVSDHFADVGKTIQMPKGATKE 82 Query 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 + DI+L+RYACYL+ QNGD +R+QE+ AF Q Sbjct 83 VPDIMLTRYACYLIAQNGD----------------SRKQEI----AFAQ----------- 111 Query 138 NELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDH 197 +A +FA+ ++ G Q L+G Q A+ + + + D Sbjct 112 ------------------TGSAENFAVIRSKGDQVLFGKSTQ-AMKAEWNVPDKRPLADF 152 Query 198 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG-GTMPEELPT 256 + L A F T + G+ S+ + H + VR T+ LG G PE LP Sbjct 153 APTIILKAKDFATEITIFNAREHGMKSEGGISNEHITNNKAVRNTL--LGRGICPESLP- 209 Query 257 PQVSIKQLENSVKITEKK 274 P +K++E + EK+ Sbjct 210 PAEDVKKVERRLASEEKQ 227 >ref|YP_004162276.1| hypothetical protein Bache_2746 [Bacteroides helcogenes P 36-108] gb|ADV44690.1| hypothetical protein Bache_2746 [Bacteroides helcogenes P 36-108] Length=182 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 46/101 (45%), Positives = 69/101 (68%), Gaps = 0/101 (0%) Query 27 LGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRY 86 + K L Y++YR+F+ V+++AK ACENS T+ DHF ++ + V IG N ++ I ++ Y Sbjct 1 MVKALEYTDYRNFLSVISKAKIACENSNQTVQDHFVDVTEKVFIGYNIEKQAHTIFMTPY 60 Query 87 ACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 ACYL VQN P+K ++A QTYFAIQTR E+ + ++QL Sbjct 61 ACYLAVQNSAPSKTIVAQAQTYFAIQTRIAEVKQMQEYEQL 101 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 22/31 (70%), Positives = 26/31 (83%), Gaps = 0/31 (0%) Query 226 QQANTTHFDVGRKVRQTIQELGGTMPEELPT 256 +Q N H++VG KVRQTI+ELGGTMPE LPT Sbjct 99 EQLNRVHYEVGAKVRQTIKELGGTMPENLPT 129 >ref|YP_001298532.1| DNA-damage-inducible protein D [Bacteroides vulgatus ATCC 8482] gb|ABR38910.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length=213 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 9/215 (4%) Query 60 HFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELA 119 HF ++ MV +GS +R + DI L+RYACYL QNGD KP IA Q YFA+QTRR EL Sbjct 4 HFADVSKMVSVGSGVEREIDDIYLTRYACYLTAQNGDARKPTIAFAQNYFAVQTRRAELV 63 Query 120 DDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQ 179 + D +R+ R EL E K L + GV + FAI ++ G + L+ LD Sbjct 64 EQRLL-----DYERVQARTELAETEKLLSGVLYERGV-DSKGFAIIRSKGDKALF-RLDT 116 Query 180 KAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKV 239 + ++ G ++ + D + + + A F A +++ + + H + V Sbjct 117 ALLKRKLGAPDSRLLADFLPTISIKAKDFAAEMASINVQQKDLYGQSSIEKEHIENNTAV 176 Query 240 RQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 R + G PE+L + +K++E +K EKK Sbjct 177 RNMMVS-RGIYPEQLSAGE-DLKKVERRLKSEEKK 209 >ref|ZP_06287490.1| conserved domain protein [Prevotella buccalis ATCC 35310] gb|EFA91514.1| conserved domain protein [Prevotella buccalis ATCC 35310] Length=104 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 42/82 (51%), Positives = 60/82 (73%), Gaps = 0/82 (0%) Query 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E WSAR+L LLGYS++ +F V+ +AK AC+ +G I DHF ++ MV +GS ++R Sbjct 22 GVECWSARELQTLLGYSKWENFSKVIDKAKTACDKAGQQISDHFPDVKKMVNLGSGSERE 81 Query 78 LKDIVLSRYACYLVVQNGDPAK 99 + D++L+RYACYL+ QNGDP K Sbjct 82 INDMLLTRYACYLIAQNGDPRK 103 >ref|NP_490241.1| DNA-damage-inducible protein [Nostoc sp. PCC 7120] dbj|BAB78219.1| DNA-damage-inducible protein [Nostoc sp. PCC 7120] Length=266 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/125 (43%), Positives = 69/125 (55%), Gaps = 6/125 (4%) Query 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF++I+ I+ +G E W AR L +LGY ++R + RA AC+N G ++HF L Sbjct 14 PFDQIRKIDDDGTEYWLARDLMPILGYQQWRRLEDAINRAIAACKNIGQESENHF---LP 70 Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELA--DDEAF 124 M S R D LSR+ CYL NGD KP IAA Q YFA++TR ELA E Sbjct 71 M-PAKSTGGRPGDDFKLSRHGCYLTAMNGDSRKPEIAAAQNYFAVKTREAELAPQSQELL 129 Query 125 KQLRE 129 QL E Sbjct 130 SQLLE 134 >ref|ZP_08154029.1| DNA-damage-inducible protein D [Rhodococcus equi ATCC 33707] gb|EGD24693.1| DNA-damage-inducible protein D [Rhodococcus equi ATCC 33707] Length=271 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 5/112 (4%) Query 6 QPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 PF++++ + ++ E WSAR L LLGY + H V+ RAK + +GH D F Sbjct 14 SPFDQLRQVRSDRTEFWSARDLMPLLGYDRWDHVPAVIERAKASATATGHEADHLFRPST 73 Query 66 DMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQE 117 + + R ++ L+R+ACYLV NGDP KP +AA QTYFAI+TR E Sbjct 74 E-----KSGGRPRENYELARFACYLVAMNGDPRKPEVAAAQTYFAIRTREAE 120 >ref|ZP_08276471.1| DNA-damage-inducible protein D [Oxalobacteraceae bacterium IMCC9480] gb|EGF30058.1| DNA-damage-inducible protein D [Oxalobacteraceae bacterium IMCC9480] Length=219 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 114/219 (52%), Gaps = 15/219 (6%) Query 59 DHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQEL 118 DHF ++ + + A++ + DI+L+RYACYL+ QNGDP KP IA QTYFA+QTRR EL Sbjct 3 DHFADVGKTIAMPKGAEKEVPDIMLTRYACYLIAQNGDPKKPEIAFSQTYFALQTRRAEL 62 Query 119 ADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLD 178 + ++L E E R+ R++LK K+L + + +F+I ++ G L+G Sbjct 63 IE----QKLLEAE-RVSARSKLKATEKELSDVIYE-HTGGDDNFSIIRSKGDLALFG--- 113 Query 179 QKAIHQRK---GLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDV 235 K+ H K + ++ + D + L A F T + + ++ ++ H Sbjct 114 -KSTHAMKLQWHVPDHRPLADFAPTILLKAKDFATEITIFNTREHQLTNESAISSEHITN 172 Query 236 GRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 VR+T+ + G PE LP + I+++E + +KK Sbjct 173 NDAVRRTLID-RGIRPEALPASE-DIRKVERRLATDKKK 209 >ref|ZP_06088205.1| DNA-damage-inducible protein D [Bacteroides sp. 3_1_33FAA] gb|EEZ21317.1| DNA-damage-inducible protein D [Bacteroides sp. 3_1_33FAA] Length=181 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 7/184 (3%) Query 60 HFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELA 119 HF ++ M+ + A+R + DI L+RYACYL QNGD KP IA Q YFA+QTRR EL Sbjct 4 HFADVSKMISLPKGAEREIDDIYLTRYACYLTAQNGDARKPAIAFAQNYFAVQTRRAELV 63 Query 120 DDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQ 179 + D +R+ R +L E K L + GV + FAI ++ G + L+ LD Sbjct 64 EQHLL-----DYERVQARTKLAETEKLLSGVFYERGV-DSKGFAIIRSKGDKALF-RLDT 116 Query 180 KAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKV 239 + + G ++ ++D + + + A F A T +++ + + H + V Sbjct 117 ALLKCKLGAPHSRPLVDFLPTISIKAKDFAAEMTSINVQQKDLYGQSSIEKEHIENNTAV 176 Query 240 RQTI 243 R + Sbjct 177 RNMM 180 >ref|YP_004329468.1| hypothetical protein HMPREF9137_1796 [Prevotella denticola F0289] gb|AEA21637.1| conserved hypothetical protein [Prevotella denticola F0289] Length=114 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 1/91 (1%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 + E + FE + + G E WSAR+L LLGYS++ +F V+ +AK AC+N+G + DH Sbjct 7 IQELYNGFEAVA-VEVEGIECWSARELQLLLGYSKWENFSKVIDKAKIACKNAGSLVSDH 65 Query 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLV 91 F ++ MV +GS ++R + DI+L+RY CYL+ Sbjct 66 FPDVRKMVNLGSGSEREIDDILLTRYGCYLI 96 >emb|CBK67207.1| hypothetical protein [Bacteroides xylanisolvens XB1A] Length=192 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 100/190 (52%), Gaps = 10/190 (5%) Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 MV +GS A+R + +I L+RYACYLV QNGD K IA Q YFAIQTRR EL + ++ Sbjct 1 MVILGSGAEREVDNIFLTRYACYLVAQNGDSRKQEIAFAQNYFAIQTRRAELVE----QR 56 Query 127 LREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 L E E R+ R +L E K L + GV FAI ++ G + L+ +D K + ++ Sbjct 57 LIEYE-RVQARTKLAETEKLLSGVLYERGVDN-QGFAIIRSKGDKALF-HMDTKMLKRKL 113 Query 187 GLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQEL 246 + ++ + D + + + A F A T +++ + + H D VR + + Sbjct 114 DVPDSRPLADFLPTISIKAKDFAAEMTSVNVQQKDLYGQTAIENEHVDNNVAVRDML--V 171 Query 247 G-GTMPEELP 255 G G PE++P Sbjct 172 GRGIFPEQIP 181 >ref|ZP_03477839.1| hypothetical protein PRABACTJOHN_03529 [Parabacteroides johnsonii DSM 18315] gb|EEC95093.1| hypothetical protein PRABACTJOHN_03529 [Parabacteroides johnsonii DSM 18315] Length=464 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 5/116 (4%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE+IK G E WS+R L +LGYS Y+ F ++ +A N G + +HF + ++M Sbjct 13 FEQIKKRKDGGKEYWSSRDLCAVLGYSTYQKFTRIINKAIAIANNKGFNVSEHFNQTVEM 72 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEA 123 VK+GS + R +++I LSR AC ++ +N D KP + + YF +QE++ E+ Sbjct 73 VKVGSGSFRKVENIHLSRIACLIIAENADGKKPQVQMAREYF-----KQEISTPES 123 >ref|YP_002906904.1| hypothetical protein ckrop_1634 [Corynebacterium kroppenstedtii DSM 44385] gb|ACR18361.1| hypothetical protein ckrop_1634 [Corynebacterium kroppenstedtii DSM 44385] Length=263 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 6/111 (5%) Query 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF++IK +G E WSAR L L+GY+ + F + RA+ + +NSG F I + Sbjct 14 PFDQIKRAREDGTEYWSARDLMPLMGYARWEDFYKITRRAEASAKNSGQ---GGFSVITE 70 Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQE 117 G R D L+R A YLV NGDP KP +AA Q+YFA++TR E Sbjct 71 KAPEGG---RPRTDFHLNRLAAYLVAMNGDPNKPEVAAAQSYFALRTREAE 118 >ref|ZP_06975034.1| DNA-damage-inducible protein D [Ktedonobacter racemifer DSM 44963] gb|EFH79691.1| DNA-damage-inducible protein D [Ktedonobacter racemifer DSM 44963] Length=176 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 88/177 (49%), Gaps = 10/177 (5%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGY-SEYRHFIPVLTRAKEACENSGHTIDD 59 MN F+ +K N G WSAR+L + LGY + +R F V+ +A AC I + Sbjct 1 MNLSAPDFDSLKRENDQGQVYWSARELSEQLGYRTNWRGFEQVIKKAMAACATDNIPIIE 60 Query 60 HFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELA 119 +F E ++ G A R + D LS+ AC + G+ P IAA +YF E+ Sbjct 61 NFFEAKITIRQG-RATREISDYFLSKRACRYIAMQGNSHIPEIAAALSYFNYAIESHEI- 118 Query 120 DDEAFKQLR-EDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYG 175 +LR + E+R+FLR ++ E N L + A Q+GV + +F + GY GL G Sbjct 119 -----HELRHQTEQRIFLREKVAEENVHLSQTAMQSGV-KGENMGLFMDAGYNGLCG 169 >ref|NP_817387.1| gp49 [Mycobacterium phage Che8] gb|AAN12447.1| gp49 [Mycobacterium phage Che8] Length=288 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 8/143 (5%) Query 7 PFEEIKLINANGAE-QWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 PF+ ++ G E +WSAR L + +GYS ++ F P++ RAK A + G + F + + Sbjct 12 PFDAGRIPCPQGGEDRWSARWLMEQMGYSSWQKFEPIIERAKTAAASEGFNVRTLFTQTV 71 Query 66 DMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFK 125 K G R D ++R+A YL+ NG P+KP +AA QTYFA++TR+ E+ A Sbjct 72 K--KTGG---RPETDYHVTRFAAYLIAMNGQPSKPEVAAAQTYFAVKTRQAEV--QPAIP 124 Query 126 QLREDEKRLFLRNELKEHNKQLV 148 + E L + + ++LV Sbjct 125 DITTPEGLLAMTEMFADTARKLV 147 >ref|ZP_03679401.1| hypothetical protein BACCELL_03758 [Bacteroides cellulosilyticus DSM 14838] gb|EEF88625.1| hypothetical protein BACCELL_03758 [Bacteroides cellulosilyticus DSM 14838] Length=459 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 0/114 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE IK N +G E W++R L +GY+ Y F V+ +A + G I+DHF ++M Sbjct 13 FELIKKYNQDGKEYWTSRDLCGAMGYTTYYRFASVVKKAIAIAQAKGMDINDHFYLAVEM 72 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD 121 VK+GS A R +++ LSR AC ++ +N D K ++ + +F QT EL + Sbjct 73 VKLGSGAYRNVENFHLSRMACLIIAENADSKKTLVQQARIFFKNQTSLFELTSN 126 >ref|ZP_03016394.1| hypothetical protein BACINT_03999 [Bacteroides intestinalis DSM 17393] ref|ZP_03016396.1| hypothetical protein BACINT_04001 [Bacteroides intestinalis DSM 17393] gb|EDV04858.1| hypothetical protein BACINT_03999 [Bacteroides intestinalis DSM 17393] gb|EDV04860.1| hypothetical protein BACINT_04001 [Bacteroides intestinalis DSM 17393] Length=463 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%) Query 6 QP-FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 QP E IK N +G E W++R L +GY+ Y F V+ +A + G I+DHF Sbjct 10 QPQLELIKKYNQDGKEYWTSRDLCGAMGYTTYYRFTSVVKKAIAIAQAKGMDINDHFHLT 69 Query 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD 121 ++MVK+GS A R +++ LSR AC ++ +N D K ++ + +F QT EL + Sbjct 70 VEMVKLGSGAYRNVENFHLSRMACLIIAENADSTKALVQQARIFFKNQTSLFELTSN 126 >ref|ZP_04847095.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gb|EES68149.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length=468 Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 0/116 (0%) Query 3 EHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFE 62 E F+ I+ + G E WS+R L +GYS Y F V+ +A + G +DDHF Sbjct 9 EMRPSFDNIRRQDGGGNEYWSSRDLCAAMGYSAYWKFQRVIDKAIKVAGEKGMNVDDHFN 68 Query 63 EILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQEL 118 + +DMV+IGS + R + LSR AC +V +N D K ++ + YF EL Sbjct 69 QTVDMVRIGSGSFRKVNIFRLSRMACMIVAENADVKKVLVQQARDYFTRTISTNEL 124 >ref|YP_171480.1| DNA-damage-inducible protein [Synechococcus elongatus PCC 6301] ref|YP_399785.1| DNA-damage-inducible protein [Synechococcus elongatus PCC 7942] dbj|BAD78960.1| DNA-damage-inducible protein [Synechococcus elongatus PCC 6301] gb|ABB56798.1| DNA-damage-inducible protein [Synechococcus elongatus PCC 7942] Length=215 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 4/118 (3%) Query 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF+ I+ + NG E W+ R+L L Y ++HF + RA +C+ G + DHF + Sbjct 4 PFDSIRHVE-NGQEFWNGRELMGFLDYPHWQHFTNAIDRAIISCQRRGKHVADHFSRTIT 62 Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 K G R +D LSR A YLV N DP K +AA Q YF ++ R E D +A Sbjct 63 KFKTGG---RPREDYRLSRLAAYLVAMNSDPRKRSVAAAQEYFYLRIRESEERDQKAL 117 >emb|CBW21698.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length=459 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 0/112 (0%) Query 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 F+ I+ + G E WS+R L +GYS Y F V+ +A + G +DDHF + +D Sbjct 4 SFDNIRRQDEGGNEYWSSRDLCTAMGYSAYWKFQRVIDKAIKVAGEKGMNVDDHFNQTVD 63 Query 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQEL 118 MV+IGS + R + LSR AC ++ +N D K ++ + YF EL Sbjct 64 MVRIGSGSFRKVNIFRLSRMACMIIAENADVKKVLVQQARDYFTRTISTNEL 115 >ref|ZP_03016346.1| hypothetical protein BACINT_03951 [Bacteroides intestinalis DSM 17393] gb|EDV04810.1| hypothetical protein BACINT_03951 [Bacteroides intestinalis DSM 17393] Length=462 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 0/114 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE IK +A G E W++R+L LGYS Y+ F +L RA G HF + M Sbjct 14 FERIKKRDAKGLEYWTSRELCTALGYSTYQKFNRILNRAIAIANKKGCNTTGHFNPTIKM 73 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD 121 VK S + R +++I LSR AC ++ +N D KP + + YF + EL D+ Sbjct 74 VKQASGSFRKVENIHLSRIACLMIAENADSKKPQVQMAREYFKQEISTPELIDN 127 >ref|ZP_06655747.1| predicted protein [Escherichia coli B354] gb|EFF11219.1| predicted protein [Escherichia coli B354] Length=89 Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 0/77 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE S DH Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH 64 Query 61 FEEILDMVKIGSNAKRA 77 F E MV + +R+ Sbjct 65 FVETTKMVVLSCRPRRS 81 >ref|YP_655040.1| gp44 [Mycobacterium phage Llij] gb|ABD58260.1| gp44 [Mycobacterium phage Llij] Length=288 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 6/112 (5%) Query 7 PFEEIKLINANGAE-QWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 PF+ ++ + G E +WSAR L + +GY +++F V+ RAK + N G + F + Sbjct 12 PFDAGRIPCSQGGEDRWSARWLMEQMGYDNWQNFEKVVERAKVSAHNQGFNVRTLFTAVS 71 Query 66 DMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQE 117 A R D +++R+A YL+ NGDP KP ++A Q YFA++TR E Sbjct 72 K-----KGAGRPQSDFLVTRFAAYLIAMNGDPRKPEVSAAQEYFAVKTREAE 118 >ref|YP_001300919.1| hypothetical protein BVU_3686 [Bacteroides vulgatus ATCC 8482] gb|ABR41297.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length=470 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 0/111 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE I + NG E WS+R L +GYS Y F V+ +A + G +D+HF + +DM Sbjct 14 FENICRKDENGNEYWSSRDLCGAMGYSAYWKFQRVIDKAIKVAGEKGMNVDEHFNQAVDM 73 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQEL 118 VKIG+ + R + LSR AC ++ +N D K ++ + +F+ EL Sbjct 74 VKIGNGSFRKVNIFRLSRMACMIIAENADGKKLLVQQARDFFSQSVSMAEL 124 >ref|NP_813450.1| hypothetical protein BT_4539 [Bacteroides thetaiotaomicron VPI-5482] gb|AAO79644.1| conserved hypothetical protein [Bacteroides thetaiotaomicron VPI-5482] Length=462 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 0/111 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE I + NG + WS+R L +GYS Y F V+ +A + G +D+HF +++DM Sbjct 5 FENICRKDENGNKYWSSRDLCGAMGYSAYWKFQRVIDKAIKVAGEKGMNVDEHFNQVVDM 64 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQEL 118 VKIG+ + R + LSR AC ++ +N D K ++ + +F+ EL Sbjct 65 VKIGNGSFRKVNIFRLSRMACMIIAENADGKKLLVQQARDFFSQSISMTEL 115 >ref|ZP_08300964.1| toxin-antitoxin system, toxin component, Fic family [Bacteroides fluxus YIT 12057] gb|EGF55863.1| toxin-antitoxin system, toxin component, Fic family [Bacteroides fluxus YIT 12057] Length=468 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 0/117 (0%) Query 3 EHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFE 62 E F+ I+ + + E WS+R L +GYS Y F V+ +A + G ID+HF Sbjct 9 EMRPSFDNIRRHDESENEYWSSRDLCAAMGYSAYWKFQKVIDKAIKVAGIKGMNIDEHFN 68 Query 63 EILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELA 119 + +DMVKIGS + R + LSR AC ++ +N D K ++ + YF+ EL Sbjct 69 QAVDMVKIGSGSFRKVSIFRLSRMACMIIAENADAKKVLVQQARDYFSQTISTNELV 125 >ref|NP_779271.1| DNA-damage-inducible protein D [Xylella fastidiosa Temecula1] ref|YP_001829826.1| hypothetical protein XfasM23_1124 [Xylella fastidiosa M23] gb|AAO28920.1| DNA-damage-inducible protein D [Xylella fastidiosa Temecula1] gb|ACB92552.1| hypothetical protein XfasM23_1124 [Xylella fastidiosa M23] gb|ADN64072.1| hypothetical protein XFLM_11065 [Xylella fastidiosa subsp. fastidiosa GB514] Length=186 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 80/168 (47%), Gaps = 20/168 (11%) Query 76 RALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFA------IQTRRQELADDEAFKQLRE 129 +A+K LSR+AC LV D KP +A +T A I+ R Q E Sbjct 25 KAIKTYQLSRFACLLVSMTADSKKPEVARAKTILAAIANTLIEQRIQS-----------E 73 Query 130 DEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLK 189 D RL R +LK K + AA+ G+ A +F IF++ G++G+Y + + + K L Sbjct 74 DLARLETREDLKFGEKAMTSAAKDGGLQNA-EFGIFKDAGFRGMYN-MSLRELQHYKRLP 131 Query 190 KNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGR 237 + + D MG ELA NLFR TQT +++ V + H GR Sbjct 132 NGKTLYDFMGLEELAGNLFRVTQTAARIRNKDV-IRTTTTLKHCPTGR 178 >emb|CBK64674.1| Virulence protein [Alistipes shahii WAL 8301] Length=471 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 0/111 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE I + +G E WS+R L +GYS Y F V+ +A + G +D+HF + +DM Sbjct 14 FENILRKDESGNEYWSSRDLCGAMGYSTYWKFQRVIDKAIKVAGEKGMNVDEHFNQAVDM 73 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQEL 118 V+IG+ + R + LSR AC ++ +N D K ++ + +F+ EL Sbjct 74 VRIGNGSFRKVNIFRLSRMACMIIAENADGKKLLVQQARDFFSQSVSMTEL 124 >emb|CBX29043.1| hypothetical protein N47_J00240 [uncultured Desulfobacterium sp.] Length=98 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 0/65 (0%) Query 4 HHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEE 63 H PFE I+ +N G E W +R L +LGY++YR+F V+ +AK +C NSGH I+DHF + Sbjct 13 HASPFERIRKVNKVGNEYWESRDLADVLGYTQYRNFEAVIEKAKLSCFNSGHRIEDHFAD 72 Query 64 ILDMV 68 + MV Sbjct 73 VSKMV 77 >ref|ZP_06993859.1| toxin-antitoxin system, toxin component, Fic family [Bacteroides sp. 1_1_14] gb|EFI05442.1| toxin-antitoxin system, toxin component, Fic family [Bacteroides sp. 1_1_14] Length=465 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 0/102 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE+IK + +G+E W++R L LGYS Y+ F + +A + G + F ++M Sbjct 14 FEQIKKQDESGSEYWTSRDLCVALGYSTYQKFTRTINKAIAIVNHKGLNTAELFNHTVEM 73 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYF 109 V++GS + R +++I LSR AC ++ +N D KP + + YF Sbjct 74 VRLGSGSFRKVENIHLSRIACLIIAENADGKKPQVQMAREYF 115 >ref|YP_003830228.1| hypothetical protein bpr_I0904 [Butyrivibrio proteoclasticus B316] gb|ADL33646.1| hypothetical protein bpr_I0904 [Butyrivibrio proteoclasticus B316] Length=78 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/72 (54%), Positives = 46/72 (63%), Gaps = 2/72 (2%) Query 106 QTYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIF 165 ++Y IQT RQELAD F QL ED +RL +R K+ N+ L E AGV T +FAIF Sbjct 5 ESYLTIQTYRQELADH--FNQLDEDRRRLVVRGNFKQWNQLLAEIVHDAGVITNEEFAIF 62 Query 166 QNHGYQGLYGGL 177 QN GY GLYG L Sbjct 63 QNAGYMGLYGKL 74 >ref|ZP_08031351.1| hypothetical protein HMPREF9555_01439 [Selenomonas artemidis F0399] gb|EFW29340.1| hypothetical protein HMPREF9555_01439 [Selenomonas artemidis F0399] Length=139 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/49 (67%), Positives = 40/49 (81%), Gaps = 0/49 (0%) Query 217 LKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLE 265 ++RD V K+ AN TH+ VG KVRQTI++LGGTMPEELPTP SIKQ+E Sbjct 1 MRRDNVQGKENANATHYAVGAKVRQTIKDLGGTMPEELPTPDKSIKQIE 49 >ref|ZP_06091999.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gb|EEZ27385.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length=462 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 0/103 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE I + G + WS+R L +GYS Y F V+ +A + G +D+HF + +DM Sbjct 5 FENICRKDEYGNKYWSSRDLCGAMGYSAYWKFQRVIDKAIKVAGEKGMNVDEHFNQAVDM 64 Query 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFA 110 V+IG+ + R + LSR AC ++ +N D K ++ + +F+ Sbjct 65 VRIGNGSFRKVNIFRLSRMACIIIAENADGKKLLVQQARDFFS 107 >gb|EFZ68076.1| DNA-damage-inducible protein D domain protein [Escherichia coli 1357] Length=56 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 0/51 (0%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACE 51 MNEHHQPFEEI+ G E WSAR+L LL Y ++R+F VL RA +ACE Sbjct 5 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACE 55 >ref|ZP_08234929.1| hypothetical protein SACT1_1478 [Streptomyces cf. griseus XylebKG-1] gb|EGE40843.1| hypothetical protein SACT1_1478 [Streptomyces griseus XylebKG-1] Length=306 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 3/119 (2%) Query 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF+ I+ + +G E WSAR+L LLGY ++ F + +A+ E ++ E L Sbjct 16 PFDSIRRLREDGVEYWSARELMPLLGYKKWERFADAVEQARSVIEAENGSLAAEQEASLQ 75 Query 67 MVKIGSNAKRALKD-IVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 G R + D LSR A YL GD KP I A YFA +TR EL F Sbjct 76 REAFGRT--RQIGDNYWLSRRASYLTAMRGDSRKPEIRAALIYFANRTREAELGHASQF 132 >ref|ZP_07839958.1| hypothetical protein EubceDRAFT_2673 [Eubacterium cellulosolvens 6] gb|EFR63912.1| hypothetical protein EubceDRAFT_2673 [Eubacterium cellulosolvens 6] Length=93 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 3/75 (4%) Query 40 IPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAK 99 + + A ACEN+G +HF E+ M++IG + RA+KD +L+RYA YLV QN DP K Sbjct 7 LSFMVVAINACENTGSQDSNHFAEVSKMIEIGKGSHRAVKDYMLNRYAGYLVTQNRDPRK 66 Query 100 PVIAAGQTYFAIQTR 114 IA F++ TR Sbjct 67 EEIAFA---FSVVTR 78 >ref|YP_001228950.1| hypothetical protein Gura_0161 [Geobacter uraniireducens Rf4] gb|ABQ24377.1| hypothetical protein Gura_0161 [Geobacter uraniireducens Rf4] Length=92 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 0/65 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FEE+K +N +GA+ WSAR+L LLGY+++R F + RA +C SG+ D HF M Sbjct 14 FEELKKLNEHGAQYWSARKLQPLLGYTQWRRFEDAIKRAMISCGQSGNNPDYHFAGAGKM 73 Query 68 VKIGS 72 +++GS Sbjct 74 IELGS 78 >ref|ZP_05253691.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] ref|ZP_07994716.1| hypothetical protein HMPREF9011_00313 [Bacteroides sp. 3_1_40A] gb|EET14083.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gb|EFV69119.1| hypothetical protein HMPREF9011_00313 [Bacteroides sp. 3_1_40A] Length=85 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 0/55 (0%) Query 60 HFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTR 114 HF ++ MV +GS A+R + DI +RYACYL QNGD KP IA Q Y+ + R Sbjct 4 HFADVSKMVSVGSGAEREIDDIYFTRYACYLTAQNGDARKPAIAFAQNYYDGKPR 58 >ref|ZP_05427401.1| DNA-damage-inducible protein D [Eubacterium saphenum ATCC 49989] gb|EEU04023.1| DNA-damage-inducible protein D [Eubacterium saphenum ATCC 49989] Length=135 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%) Query 49 ACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAA 104 AC SGH + F E+ +V G+ +K ++KD L+RYACYL+VQNGDP K V +A Sbjct 38 ACATSGHEVTSDFAEVGKIVDAGATSK-SIKDYELTRYACYLIVQNGDPRKEVRSA 92 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 17/32 (53%), Positives = 26/32 (81%), Gaps = 0/32 (0%) Query 234 DVGRKVRQTIQELGGTMPEELPTPQVSIKQLE 265 D ++VR I+++GGTMPE+LP P+ SI+Q+E Sbjct 84 DPRKEVRSAIEKIGGTMPEDLPVPEKSIQQIE 115 >ref|ZP_01290908.1| hypothetical protein MldDRAFT_3377 [delta proteobacterium MLMS-1] gb|EAT02673.1| hypothetical protein MldDRAFT_3377 [delta proteobacterium MLMS-1] Length=189 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 0/62 (0%) Query 19 AEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRAL 78 E W AR L LGY+ + +F+ + RA E+CE +G+ DDHF + M++IG + + + Sbjct 25 VEFWFARDLMAPLGYARWENFLTAIKRAIESCETTGYKADDHFRGVTKMIEIGGHTTQVM 84 Query 79 KD 80 KD Sbjct 85 KD 86 >ref|ZP_00651672.1| hypothetical protein XfasaDRAFT_1076 [Xylella fastidiosa Dixon] ref|ZP_00680729.1| hypothetical protein XfasoDRAFT_3236 [Xylella fastidiosa Ann-1] gb|EAO13402.1| hypothetical protein XfasaDRAFT_1076 [Xylella fastidiosa Dixon] gb|EAO33742.1| hypothetical protein XfasoDRAFT_3236 [Xylella fastidiosa Ann-1] Length=165 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 28/146 (19%) Query 129 EDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGL 188 ED RL R +LK K + AA+ G+ A +F IF++ G++G+Y + + + + K L Sbjct 23 EDLARLETREDLKFGEKAMTSAAKDGGLQNA-EFGIFKDAGFRGMYN-MTLRELQRYKRL 80 Query 189 KKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGG 248 + + D MG ELA NLFR TQT +++ + VR+ + E G Sbjct 81 PNGKTLYDFMGLEELAGNLFRVTQTAARIRNE------------------VRRMMIENSG 122 Query 249 TMPEELPTPQVSIKQLENSVKITEKK 274 PE L LE VK +K+ Sbjct 123 AGPEHLA--------LEEDVKGVQKR 140 >ref|ZP_06405914.1| DNA-damage-inducible protein D [Prevotella sp. oral taxon 299 str. F0039] gb|EFC71149.1| DNA-damage-inducible protein D [Prevotella sp. oral taxon 299 str. F0039] Length=66 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 25/46 (54%), Positives = 36/46 (78%), Gaps = 0/46 (0%) Query 42 VLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYA 87 V+ +AKEAC NS + ++DHFE+ILDM++IG KR ++ + LSRYA Sbjct 12 VIKKAKEACANSQYKVEDHFEDILDMIEIGKGGKRPVESVKLSRYA 57 >ref|ZP_08031352.1| conserved domain protein [Selenomonas artemidis F0399] gb|EFW29341.1| conserved domain protein [Selenomonas artemidis F0399] Length=74 Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 0/57 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 F+ I+ IN G E W+AR L +LGY+EYR F V+ +AK AC +S + +H ++ Sbjct 14 FDSIRHINEYGEEFWTARALLGVLGYNEYRFFKNVIEKAKIACSSSNMNVSNHIVQV 70 >ref|ZP_07059873.1| DNA-damage-inducible protein D [Prevotella bryantii B14] gb|EFI72883.1| DNA-damage-inducible protein D [Prevotella bryantii B14] Length=57 Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 0/55 (0%) Query 30 LLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLS 84 LLGY ++ +F+ + A E C++ +DDHF E+ M+ I AKR +KD L+ Sbjct 3 LLGYEKWENFVVAIGSAIEFCKSQNINVDDHFREVTKMINIAKGAKREVKDFTLT 57 >ref|ZP_00651826.1| hypothetical protein XfasaDRAFT_1230 [Xylella fastidiosa Dixon] ref|ZP_00680767.1| hypothetical protein XfasoDRAFT_3274 [Xylella fastidiosa Ann-1] gb|EAO13556.1| hypothetical protein XfasaDRAFT_1230 [Xylella fastidiosa Dixon] gb|EAO33780.1| hypothetical protein XfasoDRAFT_3274 [Xylella fastidiosa Ann-1] Length=107 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query 22 WSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHF--EEILDMVKIGSNAKRALK 79 W A QL + LGY ++ F V+T+A AC G + F EEI V+ G +A+K Sbjct 21 WYAHQLMQWLGYESWQAFQNVITKAMGACSRLGLDPTEAFVREEI---VQDG----KAIK 73 Query 80 DIVLSRYACYLVVQNGDPAKPVIAAGQ 106 LSR+AC LV D KP G+ Sbjct 74 TYQLSRFACLLVSMTADSKKPNSGLGE 100 >ref|ZP_08444814.1| hypothetical protein HMPREF9074_00540 [Capnocytophaga sp. oral taxon 329 str. F0087] gb|EGJ57799.1| hypothetical protein HMPREF9074_00540 [Capnocytophaga sp. oral taxon 329 str. F0087] Length=75 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 0/62 (0%) Query 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE+IK N +G+E W++R L LGYS Y+ F + ++ + G DHF ++M Sbjct 14 FEQIKKQNESGSEYWTSRDLCITLGYSTYQKFTRTINKSIAIANHKGLNTADHFNHTVEM 73 Query 68 VK 69 VK Sbjct 74 VK 75 >ref|ZP_08305191.1| hypothetical protein HMPREF9538_02874 [Klebsiella sp. MS 92-3] gb|EGF62697.1| hypothetical protein HMPREF9538_02874 [Klebsiella sp. MS 92-3] Length=47 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Query 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRA 46 MNE QPFE I+ + G E WSAR LG LL Y E+R+F V+ +A Sbjct 1 MNEQ-QPFEAIRKSDEAGREYWSARNLGPLLDYKEWRNFYKVIAKA 45 >ref|ZP_06298894.1| hypothetical protein pah_c016o089 [Parachlamydia acanthamoebae str. Hall's coccus] gb|EFB42039.1| hypothetical protein pah_c016o089 [Parachlamydia acanthamoebae str. Hall's coccus] Length=48 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%), Gaps = 0/36 (0%) Query 198 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHF 233 GSTEL ANLFRATQ + K++R+ + K +AN TH+ Sbjct 7 WGSTELTANLFRATQAKGKIRRENIQGKNKANQTHY 42 >emb|CBA75578.1| DNA-damage-inducible protein [Arsenophonus nasoniae] Length=87 Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 18/33 (54%), Positives = 26/33 (78%), Gaps = 0/33 (0%) Query 54 GHTIDDHFEEILDMVKIGSNAKRALKDIVLSRY 86 GH ++DH E+ILDMV IGS+ +R LK ++L+ Y Sbjct 8 GHNLEDHLEDILDMVNIGSSVQRKLKRVILTCY 40 >ref|ZP_07939782.1| hypothetical protein HMPREF1007_02899 [Bacteroides sp. 4_1_36] gb|EFV25069.1| hypothetical protein HMPREF1007_02899 [Bacteroides sp. 4_1_36] Length=475 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 0/62 (0%) Query 49 ACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTY 108 + E G +D+HF +++MV +GS A+R++++ L+R AC + + K + A Y Sbjct 3 SAEADGINVDEHFNLMVEMVGVGSGARRSVENYHLTREACIFIARQVYAKKKEVQAALEY 62 Query 109 FA 110 F+ Sbjct 63 FS 64 Lambda K H 0.315 0.131 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 453734703288 Database: nr_env Posted date: Feb 1, 2012 7:14 AM Number of letters in database: 6,167,035,527 Number of sequences in database: 20,512,688 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40