Blast performed on February-11-2007
BLASTP 2.2.13 [Nov-27-2005]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: nr_env 
           5,549,519 sequences; 1,762,256,069 total letters

Query= EG10441 ihfB 
         (94 letters)

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_286787.1|  integration host factor beta subunit [Esch...   191   8e-48 
ref|NP_455469.1|  integration host factor beta subunit [Salm...   189   3e-47 
pdb|1OUZ|B  Chain B, Crystal Structure Of A Mutant Ihf (Beta...   189   4e-47 
ref|ZP_01588963.1|  integration host factor, beta subunit [E...   187   2e-46 
gb|EAG64268.1|  unknown [environmental sequence]                  186   3e-46 
gb|EAG53021.1|  unknown [environmental sequence]                  186   4e-46 
ref|NP_404986.1|  integration host factor beta subunit [Yers...   182   6e-45 
sp|P23303|IHFB_SERMA  Integration host factor subunit beta (...   181   8e-45 
ref|ZP_01536337.1|  integration host factor, beta subunit [S...   180   2e-44 
ref|YP_050681.1|  integration host factor beta subunit [Erwi...   179   3e-44 
ref|ZP_00822352.1|  COG0776: Bacterial nucleoid DNA-binding ...   179   5e-44 
ref|ZP_00830388.1|  COG0776: Bacterial nucleoid DNA-binding ...   178   9e-44 
ref|YP_001005836.1|  integration host factor beta-subunit [Y...   177   2e-43 
sp|P37983|IHFB_DICD3  Integration host factor subunit beta (...   176   3e-43 
ref|YP_454674.1|  integration host factor beta-subunit [Soda...   174   1e-42 
ref|NP_928912.1|  integration host factor beta subunit [Phot...   172   4e-42 
ref|YP_130634.1|  putative integration host factor, beta sub...   164   1e-39 
ref|NP_761784.1|  integration host factor beta subunit [Vibr...   159   3e-38 
ref|NP_798408.1|  integration host factor beta subunit [Vibr...   159   4e-38 
ref|NP_231548.1|  integration host factor beta subunit [Vibr...   159   6e-38 
ref|ZP_01237052.1|  putative integration host factor, beta s...   158   7e-38 
ref|NP_934094.1|  integration host factor beta subunit [Vibr...   157   1e-37 
ref|ZP_01680276.1|  integration host factor, beta subunit [V...   156   3e-37 
ref|YP_927612.1|  integration host factor, beta subunit [She...   153   3e-36 
gb|EAI69682.1|  unknown [environmental sequence]                  152   4e-36 
gb|EAH29297.1|  unknown [environmental sequence]                  152   4e-36 
ref|YP_856345.1|  integration host factor, beta subunit [Aer...   152   4e-36 
ref|YP_963360.1|  integration host factor, beta subunit [She...   152   7e-36 
gb|EAJ06354.1|  unknown [environmental sequence]                  151   9e-36 
ref|NP_717991.1|  integration host factor, beta subunit [She...   151   9e-36 
ref|ZP_00839266.1|  Integration host factor, beta subunit [S...   150   2e-35 
ref|YP_750806.1|  integration host factor, beta subunit [She...   150   3e-35 
ref|YP_562761.1|  integration host factor, beta subunit [She...   149   3e-35 
ref|ZP_01614229.1|  putative integration host factor (iHF), ...   148   8e-35 
ref|YP_339944.1|  integration host factor (iHF), beta subuni...   148   8e-35 
ref|YP_662035.1|  integration host factor, beta subunit [Pse...   147   1e-34 
ref|ZP_01598965.1|  integration host factor, beta subunit [M...   147   2e-34 
ref|YP_269056.1|  integration host factor, beta subunit [Col...   145   5e-34 
ref|YP_205141.1|  integration host factor beta-subunit [Vibr...   143   3e-33 
ref|ZP_01078051.1|  integration host factor beta-subunit [Ma...   143   3e-33 
gb|EAB21478.1|  unknown [environmental sequence]                  142   4e-33 
ref|ZP_01627117.1|  hypothetical protein MGP2080_15169 [mari...   142   4e-33 
ref|ZP_01450798.1|  integration host factor, beta subunit [a...   142   4e-33 
ref|ZP_01214971.1|  putative integration host factor, beta s...   142   6e-33 
ref|YP_944313.1|  integration host factor, beta subunit [Psy...   141   9e-33 
ref|ZP_00419286.1|  Integration host factor, beta subunit [A...   141   9e-33 
ref|ZP_01133912.1|  putative integration host factor (iHF), ...   141   1e-32 
gb|EAH24755.1|  unknown [environmental sequence]                  140   2e-32 
gb|AAM27778.1|AF498415_2  HimD [Pseudomonas aeruginosa]           140   2e-32 
ref|NP_251851.1|  integration host factor beta subunit [Pseu...   140   2e-32 
ref|ZP_01640374.1|  integration host factor, beta subunit [P...   140   2e-32 
ref|ZP_01044236.1|  Bacterial nucleoid DNA-binding protein, ...   140   2e-32 
ref|ZP_01114540.1|  integration host factor beta subunit [Re...   139   4e-32 
gb|EAH76906.1|  unknown [environmental sequence]                  139   6e-32 
ref|ZP_01526461.1|  integration host factor, beta subunit [P...   139   6e-32 
ref|YP_607172.1|  integration host factor (IHF),beta subunit...   139   6e-32 
ref|YP_527607.1|  hypothetical protein Sde_2135 [Saccharopha...   138   8e-32 
ref|NP_743929.1|  integration host factor beta subunit [Pseu...   138   8e-32 
ref|ZP_00901415.1|  Integration host factor, beta subunit [P...   138   8e-32 
gb|AAT49331.1|  PA3161 [synthetic construct]                      138   1e-31 
ref|YP_001002150.1|  integration host factor, beta subunit [...   137   1e-31 
ref|YP_349788.1|  Integration host factor, beta subunit [Pse...   137   2e-31 
ref|NP_791576.1|  integration host factor beta subunit [Pseu...   137   2e-31 
ref|YP_275803.1|  integration host factor, beta subunit [Pse...   136   3e-31 
ref|YP_741776.1|  integration host factor, beta subunit [Alk...   135   5e-31 
gb|EAD70959.1|  unknown [environmental sequence]                  135   7e-31 
ref|ZP_01103675.1|  Integration host factor beta-subunit [ga...   135   7e-31 
ref|YP_155743.1|  Bacterial nucleoid DNA-binding protein, IH...   134   1e-30 
ref|YP_693464.1|  integration host factor beta-subunit [Alca...   134   2e-30 
gb|EAE77875.1|  unknown [environmental sequence]                  133   3e-30 
ref|ZP_01125911.1|  integration host factor, beta subunit [N...   133   3e-30 
ref|YP_342244.1|  Integration host factor, beta subunit [Nit...   132   6e-30 
gb|EAD49974.1|  unknown [environmental sequence]                  132   7e-30 
gb|EAD61622.1|  unknown [environmental sequence]                  131   1e-29 
ref|YP_574202.1|  integration host factor, beta subunit [Chr...   131   1e-29 
ref|YP_958307.1|  integration host factor, beta subunit [Mar...   131   1e-29 
ref|ZP_00132221.1|  COG0776: Bacterial nucleoid DNA-binding ...   131   1e-29 
ref|YP_436092.1|  integration host factor, beta subunit [Hah...   130   2e-29 
ref|NP_240131.1|  integration host factor beta-subunit [Buch...   130   2e-29 
ref|ZP_01167042.1|  integration host factor beta subunit [Oc...   130   3e-29 
ref|NP_660642.1|  integration host factor beta subunit [Buch...   129   5e-29 
ref|ZP_01305937.1|  integration host factor, beta subunit [O...   128   8e-29 
ref|ZP_01642799.1|  integration host factor, beta subunit [S...   128   1e-28 
ref|NP_299716.1|  integration host factor beta subunit [Xyle...   127   1e-28 
ref|ZP_00652489.1|  Integration host factor, beta subunit [X...   127   1e-28 
ref|ZP_01224481.1|  integration host factor beta subunit [ma...   127   2e-28 
ref|YP_200820.1|  integration host factor beta subunit [Xant...   127   2e-28 
ref|YP_451080.1|  integration host factor beta subunit [Xant...   127   2e-28 
ref|YP_364226.1|  integration host factor beta subunit [Xant...   127   2e-28 
ref|NP_637549.1|  integration host factor beta subunit [Xant...   127   2e-28 
ref|NP_642614.1|  integration host factor beta subunit [Xant...   127   2e-28 
ref|YP_802754.1|  HimD [Buchnera aphidicola str. Cc (Cinara ...   126   3e-28 
ref|NP_245737.1|  HimD [Pasteurella multocida subsp. multoci...   126   3e-28 
sp|P95519|IHFB_PASHA  Integration host factor subunit beta (...   126   4e-28 
ref|NP_779650.1|  integration host factor beta subunit [Xyle...   126   4e-28 
ref|YP_113869.1|  integration host factor, beta subunit [Met...   124   1e-27 
ref|YP_088667.1|  HimA protein [Mannheimia succiniciproducen...   124   2e-27 
gb|EAE45953.1|  unknown [environmental sequence]                  123   3e-27 
ref|NP_873778.1|  integration host factor, beta subunit [Hae...   122   5e-27 
ref|ZP_00135487.2|  COG0776: Bacterial nucleoid DNA-binding ...   122   8e-27 
gb|EAX32738.1|  integration host factor, beta subunit [Coxie...   120   3e-26 
ref|ZP_01298862.1|  hypothetical protein CburD_01001044 [Cox...   120   3e-26 
ref|YP_096948.1|  integration host factor beta subunit [Legi...   120   3e-26 
ref|YP_391468.1|  integration host factor, beta subunit [Thi...   119   4e-26 
ref|NP_820718.1|  integration host factor, beta subunit [Cox...   119   4e-26 
ref|ZP_00157412.1|  COG0776: Bacterial nucleoid DNA-binding ...   118   9e-26 
gb|EAE02705.1|  unknown [environmental sequence]                  117   1e-25 
ref|YP_157510.1|  integration host factor beta-subunit [Azoa...   117   2e-25 
ref|NP_439377.1|  integration host factor beta-subunit [Haem...   116   4e-25 
ref|YP_412754.1|  integration host factor, beta subunit [Nit...   115   6e-25 
ref|YP_932577.1|  probable integration host factor, beta-sub...   114   1e-24 
ref|YP_158390.1|  integration host factor beta-subunit (ihf-...   114   1e-24 
ref|ZP_00154983.2|  COG0776: Bacterial nucleoid DNA-binding ...   114   1e-24 
ref|YP_545035.1|  integration host factor, beta subunit [Met...   113   4e-24 
gb|EAE09517.1|  unknown [environmental sequence]                  112   8e-24 
ref|NP_902715.1|  integration host factor beta-subunit [Chro...   112   8e-24 
ref|YP_046947.1|  integration host factor (IHF),beta subunit...   112   8e-24 
ref|NP_885302.1|  integration host factor beta-subunit [Bord...   111   1e-23 
ref|YP_314715.1|  integration host factor, beta subunit [Thi...   110   2e-23 
ref|YP_284503.1|  Integration host factor, beta subunit [Dec...   110   3e-23 
ref|NP_274321.1|  integration host factor, beta subunit [Nei...   108   7e-23 
gb|EAJ97681.1|  unknown [environmental sequence]                  108   9e-23 
ref|YP_560016.1|  Integration host factor, beta subunit [Bur...   108   9e-23 
ref|NP_879752.1|  integration host factor beta-subunit [Bord...   108   1e-22 
ref|ZP_01016789.1|  integration host factor beta chain [Parv...   108   1e-22 
gb|EAK32277.1|  unknown [environmental sequence]                  107   2e-22 
ref|YP_368402.1|  integration host factor beta subunit [Burk...   107   2e-22 
ref|YP_620453.1|  integration host factor, beta subunit [Bur...   107   2e-22 
ref|ZP_01570350.1|  integration host factor, beta subunit [B...   106   3e-22 
ref|ZP_01513248.1|  integration host factor, beta subunit [B...   106   3e-22 
ref|ZP_01500674.1|  integration host factor, beta subunit [B...   106   3e-22 
emb|CAJ48964.1|  integration host factor beta-subunit [Borde...   106   3e-22 
ref|YP_746644.1|  integration host factor, beta subunit [Nit...   106   3e-22 
ref|YP_442176.1|  integration host factor, beta subunit [Bur...   106   4e-22 
ref|YP_109110.1|  integration host factor beta subunit [Burk...   106   4e-22 
ref|ZP_01493218.1|  integration host factor, beta subunit [P...   105   6e-22 
ref|ZP_00424711.1|  Integration host factor, beta subunit [B...   105   6e-22 
ref|ZP_00055896.1|  COG0776: Bacterial nucleoid DNA-binding ...   105   6e-22 
ref|NP_841978.1|  Bacterial histone-like DNA-binding protein...   105   7e-22 
ref|YP_423367.1|  Bacterial nucleoid DNA-binding protein [Ma...   103   2e-21 
ref|ZP_01662791.1|  putative integration host factor beta-su...   102   5e-21 
ref|NP_519031.1|  integration host factor beta subunit [Rals...   102   5e-21 
ref|ZP_00946825.1|  Integration host factor beta-subunit [Ra...   102   5e-21 
ref|ZP_01617759.1|  integration host factor, beta subunit [m...   102   8e-21 
ref|YP_983020.1|  integration host factor, beta subunit [Pol...   102   8e-21 
ref|YP_207743.1|  IhfB [Neisseria gonorrhoeae FA 1090] >gi|5...   101   1e-20 
ref|ZP_01521582.1|  integration host factor, beta subunit [C...   100   2e-20 
ref|YP_725314.1|  integration host factor beta subunit [Rals...   100   2e-20 
ref|YP_296773.1|  integration host factor beta subunit [Rals...   100   2e-20 
ref|YP_582878.1|  integration host factor, beta subunit [Ral...   100   2e-20 
gb|EAC53264.1|  unknown [environmental sequence]                  100   3e-20 
ref|ZP_01577998.1|  integration host factor, beta subunit [D...   100   3e-20 
ref|NP_104360.1|  integration host factor beta subunit [Meso...   100   4e-20 
gb|EAF87749.1|  unknown [environmental sequence]                   99   5e-20 
ref|ZP_00958037.1|  integration host factor beta subunit [Oc...    99   5e-20 
ref|YP_779390.1|  integration host factor, beta subunit [Rho...    99   5e-20 
ref|YP_548622.1|  integration host factor, beta subunit [Pol...    99   7e-20 
ref|NP_889999.1|  integration host factor beta-subunit [Bord...    99   7e-20 
ref|YP_676205.1|  integration host factor, beta subunit [Mes...    99   9e-20 
ref|YP_997874.1|  histone family protein DNA-binding protein...    98   2e-19 
ref|ZP_00981977.1|  COG0776: Bacterial nucleoid DNA-binding ...    98   2e-19 
ref|ZP_01439358.1|  integration host factor beta subunit [Fu...    97   2e-19 
ref|ZP_01228467.1|  integration host factor, beta subunit [A...    97   2e-19 
ref|NP_422380.1|  integration host factor beta subunit [Caul...    97   2e-19 
ref|ZP_01551107.1|  integration host factor subunit beta [St...    97   3e-19 
ref|YP_575427.1|  integration host factor, beta subunit [Nit...    97   3e-19 
ref|YP_316678.1|  integration host factor beta subunit [Nitr...    97   3e-19 
ref|NP_697191.1|  integration host factor beta subunit [Bruc...    97   3e-19 
ref|ZP_01045129.1|  integration host factor beta subunit [Ni...    97   3e-19 
ref|ZP_01002593.1|  integration host factor beta subunit [Lo...    97   3e-19 
ref|YP_989618.1|  integration host factor, beta subunit [Bar...    97   3e-19 
ref|NP_767382.1|  integration host factor beta subunit [Brad...    97   3e-19 
ref|ZP_01200195.1|  Integration host factor, beta subunit [X...    97   3e-19 
gb|EAG16404.1|  unknown [environmental sequence]                   96   5e-19 
ref|YP_755331.1|  integration host factor, beta subunit [Mar...    96   5e-19 
ref|YP_284866.1|  Histone-like bacterial DNA-binding protein...    96   5e-19 
ref|ZP_00441665.1|  COG0776: Bacterial nucleoid DNA-binding ...    96   5e-19 
ref|YP_001021436.1|  putative integration host factor beta-s...    96   5e-19 
ref|YP_986707.1|  integration host factor, beta subunit [Aci...    96   6e-19 
ref|ZP_00998523.1|  integration host factor beta subunit [Oc...    96   6e-19 
ref|ZP_01660128.1|  bacterial nucleoid DNA-binding protein [...    96   8e-19 
ref|YP_971620.1|  histone family protein DNA-binding protein...    96   8e-19 
ref|ZP_01445531.1|  integration host factor beta subunit [Ro...    96   8e-19 
ref|YP_163536.1|  integration host factor beta-subunit [Zymo...    96   8e-19 
ref|YP_220922.1|  integration host factor beta subunit [Bruc...    96   8e-19 
ref|NP_384492.1|  integration host factor beta subunit [Sino...    96   8e-19 
ref|ZP_01036451.1|  integration host factor, beta subunit [R...    96   8e-19 
ref|ZP_00858738.1|  Integration host factor, beta subunit [B...    96   8e-19 
ref|YP_530289.1|  integration host factor, beta subunit [Rho...    96   8e-19 
ref|ZP_01419756.1|  integration host factor, beta subunit [C...    95   1e-18 
ref|YP_484260.1|  integration host factor, beta subunit [Rho...    95   1e-18 
ref|YP_467948.1|  integration host factor beta-subunit prote...    95   1e-18 
ref|YP_031742.1|  integration host factor beta subunit [Bart...    95   1e-18 
ref|NP_945422.1|  integration host factor beta subunit [Rhod...    95   1e-18 
ref|YP_355093.1|  integration host factor beta subunit [Rhod...    95   1e-18 
ref|ZP_00918192.1|  Integration host factor, beta subunit [R...    95   1e-18 
ref|ZP_00912833.1|  Integration host factor, beta subunit [R...    95   1e-18 
ref|YP_567335.1|  integration host factor, beta subunit [Rho...    95   1e-18 
ref|YP_190583.1|  Integration host factor beta-subunit [Gluc...    95   1e-18 
ref|YP_166057.1|  integration host factor beta subunit [Sili...    95   1e-18 
ref|ZP_01011259.1|  integration host factor, beta subunit [R...    95   1e-18 
ref|ZP_01552043.1|  Integration host factor, beta subunit [M...    94   2e-18 
ref|ZP_01411554.1|  nucleoid DNA-binding protein-like [Sinor...    94   2e-18 
ref|YP_425384.1|  Integration host factor, beta subunit [Rho...    94   2e-18 
ref|NP_353369.1|  integration host factor beta subunit [Agro...    94   2e-18 
ref|YP_032886.1|  integration host factor beta subunit [Bart...    94   3e-18 
ref|ZP_01054612.1|  integration host factor beta subunit [Ro...    94   3e-18 
ref|ZP_01452680.1|  DNA-binding protein HU [Mariprofundus fe...    93   4e-18 
ref|YP_684053.1|  integration host factor, beta subunit [Ros...    93   4e-18 
ref|YP_511527.1|  integration host factor, beta subunit [Jan...    93   4e-18 
ref|ZP_01156387.1|  integration host factor beta subunit [Oc...    93   4e-18 
ref|YP_616542.1|  histone-like DNA-binding protein [Sphingop...    93   4e-18 
gb|EAI49238.1|  unknown [environmental sequence]                   93   5e-18 
sp|Q8YET3|IHFB_BRUME  Integration host factor subunit beta (...    93   5e-18 
ref|YP_612197.1|  integration host factor, beta subunit [Sil...    93   5e-18 
ref|YP_758925.1|  integration host factor, beta subunit [Hyp...    92   7e-18 
ref|YP_745841.1|  integration host factor beta-subunit [Gran...    92   7e-18 
ref|ZP_00960388.1|  integration host factor, beta subunit [R...    92   7e-18 
gb|EAE55173.1|  unknown [environmental sequence]                   92   9e-18 
ref|ZP_01273071.1|  Histone-like bacterial DNA-binding prote...    92   9e-18 
gb|EAE98324.1|  unknown [environmental sequence]                   92   1e-17 
ref|ZP_01584676.1|  integration host factor, beta subunit [D...    92   1e-17 
ref|YP_522828.1|  histone-like DNA-binding protein [Rhodofer...    92   1e-17 
sp|Q06607|IHFB_RHOCA  Integration host factor subunit beta (...    92   1e-17 
ref|ZP_01145834.1|  integration host factor, beta subunit [A...    92   1e-17 
gb|EAA98284.1|  unknown [environmental sequence] >gi|4440975...    91   1e-17 
gb|EAI68380.1|  unknown [environmental sequence]                   91   1e-17 
ref|ZP_01447709.1|  integration host factor beta subunit [al...    91   1e-17 
gb|AAP58576.1|  putative DNA-binding protein [uncultured Aci...    91   1e-17 
ref|NP_540711.1|  integration host factor beta subunit [Bruc...    91   1e-17 
ref|ZP_00948252.1|  integration host factor beta subunit [Su...    91   1e-17 
gb|EAB23264.1|  unknown [environmental sequence]                   91   2e-17 
ref|YP_264775.1|  putative histone-like bacterial DNA-bindin...    90   3e-17 
ref|ZP_00985828.1|  COG0776: Bacterial nucleoid DNA-binding ...    90   3e-17 
gb|EAJ71937.1|  unknown [environmental sequence]                   90   4e-17 
gb|EAB43437.1|  unknown [environmental sequence]                   90   4e-17 
ref|YP_631695.1|  integration host factor, beta subunit [Myx...    90   4e-17 
gb|AAR37433.1|  integration host factor, beta subunit, putat...    89   6e-17 
ref|ZP_01608775.1|  histone family protein DNA-binding prote...    89   7e-17 
ref|YP_495448.1|  histone-like DNA-binding protein [Novosphi...    89   7e-17 
ref|YP_285766.1|  Histone-like bacterial DNA-binding protein...    89   7e-17 
ref|YP_284877.1|  Histone-like bacterial DNA-binding protein...    89   7e-17 
ref|YP_383835.1|  Histone-like DNA-binding protein [Geobacte...    89   7e-17 
ref|ZP_00631343.1|  Integration host factor, beta subunit [P...    89   9e-17 
gb|EAD88762.1|  unknown [environmental sequence]                   87   2e-16 
gb|EAJ85942.1|  unknown [environmental sequence]                   87   3e-16 
gb|EAC12395.1|  unknown [environmental sequence]                   87   3e-16 
ref|ZP_01304555.1|  histone-like DNA-binding protein [Sphing...    87   3e-16 
ref|NP_953647.1|  DNA-binding protein HU [Geobacter sulfurre...    87   3e-16 
ref|YP_593179.1|  histone-like DNA-binding protein [Acidobac...    87   4e-16 
ref|ZP_01312233.1|  histone-like DNA-binding protein [Desulf...    87   4e-16 
ref|ZP_01390362.1|  Histone-like bacterial DNA-binding prote...    86   5e-16 
ref|ZP_01040983.1|  integration host factor beta-subunit [Er...    86   5e-16 
gb|EAJ98789.1|  unknown [environmental sequence]                   86   6e-16 
ref|NP_059821.1|  ysa [Agrobacterium tumefaciens] >gi|612264...    86   6e-16 
ref|YP_459384.1|  integration host factor beta-subunit [Eryt...    85   1e-15 
gb|EAJ84639.1|  unknown [environmental sequence]                   84   2e-15 
gb|EAF22426.1|  unknown [environmental sequence]                   84   3e-15 
gb|EAH92951.1|  unknown [environmental sequence]                   83   4e-15 
gb|EAF37565.1|  unknown [environmental sequence]                   83   4e-15 
ref|ZP_01141825.1|  Histone-like bacterial DNA-binding prote...    83   4e-15 
ref|YP_825546.1|  histone family protein DNA-binding protein...    83   4e-15 
gb|EAI23472.1|  unknown [environmental sequence]                   83   5e-15 
ref|NP_952796.1|  integration host factor, beta subunit [Geo...    83   5e-15 
ref|YP_866034.1|  histone family protein DNA-binding protein...    83   5e-15 
gb|EAJ05567.1|  unknown [environmental sequence]                   82   7e-15 
ref|YP_845551.1|  histone family protein DNA-binding protein...    82   7e-15 
gb|EAI63310.1|  unknown [environmental sequence]                   82   9e-15 
gb|EAD33181.1|  unknown [environmental sequence]                   82   9e-15 
gb|EAC17477.1|  unknown [environmental sequence]                   82   9e-15 
ref|ZP_01300932.1|  hypothetical protein Rgryl_01000254 [Ric...    82   9e-15 
ref|YP_356871.1|  BHL, histone-like protein [Pelobacter carb...    82   9e-15 
ref|YP_384787.1|  Histone-like DNA-binding protein [Geobacte...    82   9e-15 
gb|EAY51875.1|  histone-like DNA-binding protein [Shewanella...    82   1e-14 
ref|ZP_01141111.1|  Histone-like bacterial DNA-binding prote...    82   1e-14 
gb|EAG20685.1|  unknown [environmental sequence]                   81   2e-14 
ref|YP_970027.1|  histone family protein DNA-binding protein...    81   2e-14 
ref|ZP_01287453.1|  Histone-like bacterial DNA-binding prote...    81   2e-14 
ref|ZP_01594331.1|  histone-like DNA-binding protein [Geobac...    81   2e-14 
ref|YP_901029.1|  histone family protein DNA-binding protein...    81   2e-14 
ref|ZP_01312974.1|  histone-like DNA-binding protein [Desulf...    81   2e-14 
gb|EAF31170.1|  unknown [environmental sequence]                   80   3e-14 
ref|YP_865970.1|  histone family protein DNA-binding protein...    80   3e-14 
ref|YP_866660.1|  histone family protein DNA-binding protein...    80   3e-14 
gb|EAJ73027.1|  unknown [environmental sequence]                   79   6e-14 
ref|YP_865161.1|  histone family protein DNA-binding protein...    79   6e-14 
ref|ZP_01390176.1|  Histone-like bacterial DNA-binding prote...    79   6e-14 
ref|ZP_01064525.1|  DNA-binding protein HU-beta [Vibrio sp. ...    79   6e-14 
ref|YP_901558.1|  histone family protein DNA-binding protein...    79   6e-14 
ref|YP_866807.1|  histone family protein DNA-binding protein...    79   6e-14 
ref|YP_896100.1|  DNA-binding protein HU [Bacillus thuringie...    79   7e-14 
ref|NP_563395.1|  probable DNA binding protein [Clostridium ...    79   7e-14 
ref|NP_833453.1|  DNA-binding protein HU [Bacillus cereus AT...    79   7e-14 
gb|EAI07896.1|  unknown [environmental sequence]                   79   1e-13 
ref|ZP_01654705.1|  histone-like DNA-binding protein [Thermo...    78   1e-13 
ref|YP_001002188.1|  histone family protein DNA-binding prot...    78   1e-13 
ref|ZP_00990187.1|  DNA-binding protein HU-beta [Vibrio sple...    78   1e-13 
ref|YP_357291.1|  nucleoid DNA-binding protein [Pelobacter c...    77   2e-13 
ref|YP_743117.1|  histone family protein DNA-binding protein...    77   2e-13 
gb|EAF07194.1|  unknown [environmental sequence]                   77   3e-13 
ref|YP_011081.1|  DNA-binding protein HU, beta subunit, puta...    77   3e-13 
ref|YP_064554.1|  DNA-binding protein HU-beta [Desulfotalea ...    77   3e-13 
ref|ZP_01218800.1|  putative bacterial nucleoid DNA-binding ...    77   4e-13 
ref|ZP_01159763.1|  putative bacterial nucleoid DNA-binding ...    77   4e-13 
gb|EAI76186.1|  unknown [environmental sequence]                   76   5e-13 
gb|EAA81260.1|  unknown [environmental sequence]                   76   5e-13 
ref|YP_574093.1|  histone-like DNA-binding protein [Chromoha...    76   5e-13 
ref|ZP_01187756.1|  Histone-like bacterial DNA-binding prote...    76   5e-13 
gb|EAK40259.1|  unknown [environmental sequence]                   76   6e-13 
gb|EAH40996.1|  unknown [environmental sequence]                   76   6e-13 
ref|YP_536662.1|  DNA-binding protein HU [Lactobacillus sali...    76   6e-13 
ref|NP_797299.1|  DNA-binding protein HU-beta [Vibrio paraha...    75   8e-13 
ref|ZP_01168369.1|  DNA-binding protein HU [Oceanospirillum ...    75   8e-13 
ref|YP_981868.1|  histone family protein DNA-binding protein...    75   8e-13 
ref|NP_744452.1|  DNA-binding protein HU-beta [Pseudomonas p...    75   8e-13 
dbj|GAA01202.1|  unnamed protein product [Pelotomaculum ther...    75   1e-12 
ref|YP_580914.1|  histone-like DNA-binding protein [Psychrob...    75   1e-12 
ref|YP_618892.1|  Histone-like DNA-binding protein [Lactobac...    75   1e-12 
ref|YP_357099.1|  DNA-binding protein HU-beta, NS1(HU-1) [Pe...    75   1e-12 
ref|YP_343774.1|  Histone-like DNA-binding protein [Nitrosoc...    75   1e-12 
ref|YP_193852.1|  DNA-binding protein II HB [Lactobacillus a...    75   1e-12 
ref|YP_012184.1|  integration host factor, beta subunit [Des...    75   1e-12 
ref|NP_832076.1|  DNA-binding protein HU [Bacillus cereus AT...    75   1e-12 
ref|NP_844759.1|  DNA-binding protein HU [Bacillus anthracis...    75   1e-12 
ref|ZP_01291761.1|  Histone-like bacterial DNA-binding prote...    75   1e-12 
ref|YP_130815.1|  putative bacterial nucleoid DNA-binding pr...    75   1e-12 
ref|NP_242175.1|  non-specific DNA-binding protein II (HB) (...    75   1e-12 
ref|ZP_01184054.1|  Histone-like bacterial DNA-binding prote...    75   1e-12 
ref|ZP_00990754.1|  Bacterial nucleoid DNA-binding protein [...    75   1e-12 
ref|NP_231553.1|  DNA-binding protein HU-beta [Vibrio choler...    75   1e-12 
gb|EAE47263.1|  unknown [environmental sequence]                   74   2e-12 
ref|YP_535778.1|  DNA-binding protein HU [Lactobacillus sali...    74   2e-12 
ref|NP_785424.1|  DNA-binding protein II [Lactobacillus plan...    74   2e-12 
ref|NP_692713.1|  non-specific DNA-binding protein [Oceanoba...    74   2e-12 
ref|ZP_01178525.1|  Histone-like bacterial DNA-binding prote...    74   2e-12 
ref|YP_001021149.1|  DNA-binding protein Hu-beta [Methylibiu...    74   2e-12 
gb|EAJ94234.1|  unknown [environmental sequence]                   74   2e-12 
ref|ZP_01616551.1|  DNA-binding protein HU [marine gamma pro...    74   2e-12 
ref|YP_894214.1|  DNA-binding protein HU [Bacillus thuringie...    74   2e-12 
ref|YP_204182.1|  DNA-binding protein HU [Vibrio fischeri ES...    74   2e-12 
ref|YP_079579.1|  non-specific DNA-binding protein HBsu sign...    74   2e-12 
ref|NP_815267.1|  DNA-binding protein HU [Enterococcus faeca...    74   2e-12 
ref|ZP_00391834.1|  COG0776: Bacterial nucleoid DNA-binding ...    74   2e-12 
ref|NP_831289.1|  DNA-binding protein HU [Bacillus cereus AT...    74   2e-12 
ref|NP_843982.1|  DNA-binding protein HU [Bacillus anthracis...    74   2e-12 
gb|EAJ59509.1|  unknown [environmental sequence]                   74   3e-12 
gb|EAH98229.1|  unknown [environmental sequence]                   74   3e-12 
gb|EAD53104.1|  unknown [environmental sequence]                   74   3e-12 
ref|ZP_01612270.1|  DNA-binding protein HU-alpha (HU-2) [Alt...    74   3e-12 
ref|ZP_01521751.1|  histone-like DNA-binding protein [Comamo...    74   3e-12 
ref|YP_814721.1|  nucleoid DNA-binding protein [Lactobacillu...    74   3e-12 
ref|YP_264756.1|  putative DNA-binding protein HU-beta [Psyc...    74   3e-12 
ref|NP_964948.1|  DNA-binding protein HU [Lactobacillus john...    74   3e-12 
ref|ZP_01172013.1|  non-specific DNA-binding protein HBsu; s...    74   3e-12 
ref|ZP_00909391.1|  Histone-like bacterial DNA-binding prote...    74   3e-12 
gb|EAH66342.1|  unknown [environmental sequence]                   73   4e-12 
gb|EAB22971.1|  unknown [environmental sequence]                   73   4e-12 
ref|ZP_01609766.1|  histone family protein DNA-binding prote...    73   4e-12 
ref|YP_607514.1|  DNA-binding protein HU-beta [Pseudomonas e...    73   4e-12 
ref|YP_549877.1|  histone-like DNA-binding protein [Polaromo...    73   4e-12 
ref|YP_461298.1|  integration host factor beta-subunit [Synt...    73   4e-12 
ref|YP_388291.1|  histone-like DNA-binding protein [Desulfov...    73   4e-12 
prf||1702428A  DNA binding protein HU                              73   4e-12 
ref|ZP_00835690.1|  Histone-like bacterial DNA-binding prote...    73   4e-12 
ref|NP_371997.1|  DNA-binding protein II [Staphylococcus aur...    73   4e-12 
ref|ZP_01581242.1|  histone-like DNA-binding protein [Delfti...    73   5e-12 
ref|ZP_01521655.1|  histone-like DNA-binding protein [Comamo...    73   5e-12 
ref|YP_529303.1|  DNA-binding protein HU [Saccharophagus deg...    73   5e-12 
gb|AAA72912.1|  HBsu protein                                       73   5e-12 
ref|YP_253353.1|  DNA-binding protein II [Staphylococcus hae...    73   5e-12 
ref|YP_176412.1|  DNA-binding protein HU [Bacillus clausii K...    73   5e-12 
ref|YP_175124.1|  DNA-binding protein HU [Bacillus clausii K...    73   5e-12 
ref|NP_390160.1|  non-specific DNA-binding protein HBsu; sig...    73   5e-12 
ref|YP_148068.1|  DNA-binding protein HU (DNA-binding protei...    73   5e-12 
ref|NP_759036.1|  Bacterial nucleoid DNA-binding protein [Vi...    73   5e-12 
gb|EAJ69056.1|  unknown [environmental sequence]                   72   7e-12 
gb|EAG51769.1|  unknown [environmental sequence]                   72   7e-12 
gb|EAE95642.1|  unknown [environmental sequence]                   72   7e-12 
ref|ZP_01544311.1|  histone-like DNA-binding protein [Oenoco...    72   7e-12 
ref|YP_794953.1|  nucleoid DNA-binding protein [Lactobacillu...    72   7e-12 
ref|YP_812825.1|  nucleoid DNA-binding protein [Lactobacillu...    72   7e-12 
ref|YP_810584.1|  nucleoid DNA-binding protein [Oenococcus o...    72   7e-12 
ref|YP_359077.1|  DNA-binding protein HU [Carboxydothermus h...    72   7e-12 
ref|YP_384565.1|  Histone-like DNA-binding protein [Geobacte...    72   7e-12 
ref|NP_244222.1|  non-specific DNA-binding protein II (HB) (...    72   7e-12 
ref|NP_799290.1|  DNA-binding protein HU-2 [Vibrio parahaemo...    72   7e-12 
ref|ZP_01164257.1|  Histone-like bacterial DNA-binding prote...    72   7e-12 
ref|ZP_01077195.1|  DNA-binding protein HU-beta [Marinomonas...    72   7e-12 
ref|YP_899597.1|  histone family protein DNA-binding protein...    72   7e-12 
ref|ZP_00237010.1|  DNA-binding protein HU [Bacillus cereus ...    72   7e-12 
gb|EAH95972.1|  unknown [environmental sequence]                   72   9e-12 
gb|EAD52273.1|  unknown [environmental sequence]                   72   9e-12 
gb|EAF75066.1|  unknown [environmental sequence]                   72   9e-12 
ref|ZP_01673166.1|  integration host factor, beta subunit [C...    72   9e-12 
ref|ZP_01602567.1|  histone family protein DNA-binding prote...    72   9e-12 
ref|YP_877121.1|  DNA binding protein HU [Clostridium novyi ...    72   9e-12 
ref|YP_986854.1|  histone family protein DNA-binding protein...    72   9e-12 
ref|YP_527085.1|  DNA-binding protein HU [Saccharophagus deg...    72   9e-12 
ref|YP_433417.1|  Bacterial nucleoid DNA-binding protein [Ha...    72   9e-12 
ref|NP_968954.1|  DNA-binding protein HU-alpha (HU-2) [Bdell...    72   9e-12 
ref|ZP_01132008.1|  DNA-binding protein HU-beta (NS1) (HU-1)...    72   9e-12 
ref|ZP_00415200.1|  Histone-like bacterial DNA-binding prote...    72   9e-12 
gb|EAJ06384.1|  unknown [environmental sequence]                   72   1e-11 
ref|ZP_01575860.1|  histone-like DNA-binding protein [Clostr...    72   1e-11 
ref|NP_661199.1|  DNA-binding protein HU-alpha, putative [Ch...    72   1e-11 
ref|YP_341945.1|  DNA-binding protein HU-beta (NS1) (HU-1) [...    72   1e-11 
ref|YP_301363.1|  bacterial nucleoid DNA-binding protein HU ...    72   1e-11 
ref|YP_752198.1|  histone family protein DNA-binding protein...    72   1e-11 
gb|EAC02222.1|  unknown [environmental sequence]                   71   2e-11 
ref|ZP_01613486.1|  DNA-binding protein HU-beta (NS1) (HU-1)...    71   2e-11 
ref|YP_205780.1|  DNA-binding protein HU [Vibrio fischeri ES...    71   2e-11 
ref|YP_428967.1|  Histone-like DNA-binding protein [Moorella...    71   2e-11 
ref|YP_077056.1|  non-specific DNA-binding protein [Symbioba...    71   2e-11 
ref|ZP_01262623.1|  bacterial nucleoid DNA-binding protein [...    71   2e-11 
ref|ZP_00157332.1|  COG0776: Bacterial nucleoid DNA-binding ...    71   2e-11 
gb|EAJ57384.1|  unknown [environmental sequence]                   71   2e-11 
gb|EAI99885.1|  unknown [environmental sequence] >gi|4463684...    71   2e-11 
ref|YP_595269.1|  Bacterial nucleoid DNA-binding protein [La...    71   2e-11 
ref|YP_378678.1|  Histone-like DNA-binding protein [Chlorobi...    71   2e-11 
ref|NP_954173.1|  DNA-binding protein HU [Geobacter sulfurre...    71   2e-11 
ref|YP_383323.1|  Histone-like DNA-binding protein [Geobacte...    71   2e-11 
ref|NP_820447.1|  DNA-binding protein HU-beta [Coxiella burn...    71   2e-11 
ref|YP_339805.1|  DNA-binding protein [Pseudoalteromonas hal...    71   2e-11 
ref|ZP_01114407.1|  DNA-binding protein HU [Reinekea sp. MED...    71   2e-11 
ref|YP_900861.1|  histone family protein DNA-binding protein...    71   2e-11 
ref|ZP_00662014.1|  Histone-like bacterial DNA-binding prote...    71   2e-11 
ref|ZP_00583380.1|  Histone-like bacterial DNA-binding prote...    71   2e-11 
ref|NP_717406.1|  DNA-binding protein, HU family [Shewanella...    71   2e-11 
gb|EAK53047.1|  unknown [environmental sequence]                   70   3e-11 
gb|EAI76657.1|  unknown [environmental sequence]                   70   3e-11 
ref|ZP_01539226.1|  histone-like DNA-binding protein [Shewan...    70   3e-11 
ref|ZP_01509632.1|  histone-like DNA-binding protein [Burkho...    70   3e-11 
ref|NP_760155.1|  Bacterial nucleoid DNA-binding protein [Vi...    70   3e-11 
ref|NP_935938.1|  bacterial nucleoid DNA-binding protein [Vi...    70   3e-11 
ref|NP_849067.1|  DNA-binding protein Hu homolog [Cyanidiosc...    70   3e-11 
ref|NP_046614.1|  histone-like prokaryotic DNA-binding prote...    70   3e-11 
ref|YP_901451.1|  histone family protein DNA-binding protein...    70   3e-11 
gb|EAD30031.1|  unknown [environmental sequence]                   70   3e-11 
gb|EAD16065.1|  unknown [environmental sequence]                   70   3e-11 
ref|ZP_01288562.1|  Histone-like bacterial DNA-binding prote...    70   3e-11 
ref|YP_445501.1|  DNA-binding protein HU [Salinibacter ruber...    70   3e-11 
ref|YP_375621.1|  Histone-like DNA-binding protein [Pelodict...    70   3e-11 
ref|YP_395626.1|  Histone-like DNA-binding protein HU [Lacto...    70   3e-11 
ref|NP_250495.1|  DNA-binding protein HU [Pseudomonas aerugi...    70   3e-11 
ref|ZP_01150219.1|  Histone-like bacterial DNA-binding prote...    70   3e-11 
ref|ZP_01125867.1|  DNA-binding protein HU-beta, NS1 [Nitroc...    70   3e-11 
ref|YP_739520.1|  histone family protein DNA-binding protein...    70   3e-11 
ref|YP_870291.1|  histone family protein DNA-binding protein...    70   3e-11 
ref|YP_619430.1|  Histone-like DNA-binding protein [Lactobac...    70   3e-11 
gb|EAJ83234.1|  unknown [environmental sequence]                   70   5e-11 
ref|ZP_01527891.1|  histone-like DNA-binding protein [Pseudo...    70   5e-11 
ref|YP_563495.1|  histone-like DNA-binding protein [Shewanel...    70   5e-11 
ref|YP_268603.1|  DNA-binding protein, HU family [Colwellia ...    70   5e-11 
gb|AAZ17499.1|  HbsU-like protein [Bacillus thuringiensis] >...    70   5e-11 
ref|NP_349807.1|  DNA binding protein HU [Clostridium acetob...    70   5e-11 
ref|ZP_01167645.1|  integration host factor, alpha subunit [...    70   5e-11 
ref|ZP_01100986.1|  Histone-like bacterial DNA-binding prote...    70   5e-11 
ref|YP_732685.1|  histone family protein DNA-binding protein...    70   5e-11 
ref|ZP_00838691.1|  Histone-like bacterial DNA-binding prote...    70   5e-11 
ref|YP_902326.1|  histone family protein DNA-binding protein...    70   5e-11 
ref|ZP_00590167.1|  Histone-like bacterial DNA-binding prote...    70   5e-11 
ref|YP_929030.1|  histone-like DNA-binding protein [Shewanel...    70   5e-11 
gb|EAI46982.1|  unknown [environmental sequence]                   69   6e-11 
gb|EAK51804.1|  unknown [environmental sequence]                   69   6e-11 
gb|EAH95350.1|  unknown [environmental sequence]                   69   6e-11 
ref|YP_903813.1|  histone family protein DNA-binding protein...    69   6e-11 
ref|YP_806601.1|  nucleoid DNA-binding protein [Lactobacillu...    69   6e-11 
ref|ZP_01452046.1|  histone-like protein [Mariprofundus ferr...    69   6e-11 
ref|YP_997457.1|  histone family protein DNA-binding protein...    69   6e-11 
ref|ZP_01313136.1|  histone-like DNA-binding protein [Desulf...    69   6e-11 
ref|YP_558729.1|  Putative DNA-binding protein HU-alpha, Hup...    69   6e-11 
ref|YP_220382.1|  hypothetical protein p49879_1p05 [Leptospi...    69   6e-11 
ref|NP_716184.1|  DNA-binding protein, HU family [Shewanella...    69   6e-11 
ref|YP_340558.1|  DNA-binding protein [Pseudoalteromonas hal...    69   6e-11 
ref|ZP_01174713.1|  COG0776: Bacterial nucleoid DNA-binding ...    69   6e-11 
ref|YP_733685.1|  histone family protein DNA-binding protein...    69   6e-11 
ref|ZP_00582908.1|  Histone-like bacterial DNA-binding prote...    69   6e-11 
ref|YP_751272.1|  histone family protein DNA-binding protein...    69   6e-11 
ref|ZP_00592536.1|  Histone-like bacterial DNA-binding prote...    69   6e-11 
ref|YP_868193.1|  histone family protein DNA-binding protein...    69   6e-11 
ref|ZP_00135276.1|  COG0776: Bacterial nucleoid DNA-binding ...    69   6e-11 
ref|ZP_00418896.1|  Histone-like bacterial DNA-binding prote...    69   6e-11 
ref|ZP_00503891.1|  Histone-like bacterial DNA-binding prote...    69   6e-11 
gb|ABK00607.1|  DNA-binding protein HU [Bacillus cereus]           69   8e-11 
ref|ZP_01386081.1|  Histone-like bacterial DNA-binding prote...    69   8e-11 
ref|ZP_01227312.1|  DNA-binding protein [Aurantimonas sp. SI...    69   8e-11 
ref|ZP_01215325.1|  Bacterial nucleoid DNA-binding protein [...    69   8e-11 
ref|NP_623981.1|  Bacterial nucleoid DNA-binding protein [Th...    69   8e-11 
ref|YP_340415.1|  integration host factor (IHF), alpha subun...    69   8e-11 
ref|NP_882045.1|  DNA-binding protein Hu-beta [Bordetella pe...    69   8e-11 
ref|YP_662693.1|  histone-like DNA-binding protein [Pseudoal...    69   8e-11 
ref|ZP_00588333.1|  Histone-like bacterial DNA-binding prote...    69   8e-11 
ref|NP_439464.1|  integration host factor alpha-subunit [Hae...    69   8e-11 
gb|EAK43514.1|  unknown [environmental sequence]                   69   1e-10 
gb|EAD66369.1|  unknown [environmental sequence]                   69   1e-10 
gb|EAE66741.1|  unknown [environmental sequence]                   69   1e-10 
gb|EAD80756.1|  unknown [environmental sequence]                   69   1e-10 
ref|YP_959106.1|  histone family protein DNA-binding protein...    69   1e-10 
ref|ZP_01614574.1|  integration host factor (IHF), alpha sub...    69   1e-10 
emb|CAJ49731.1|  DNA-binding protein Hu-beta [Bordetella avi...    69   1e-10 
ref|ZP_01385964.1|  Histone-like bacterial DNA-binding prote...    69   1e-10 
ref|YP_942884.1|  DNA-binding protein HU beta subunit [Psych...    69   1e-10 
ref|ZP_01215601.1|  DNA-binding protein [Psychromonas sp. CN...    69   1e-10 
ref|YP_561671.1|  histone-like DNA-binding protein [Shewanel...    69   1e-10 
ref|YP_155391.1|  Bacterial nucleoid DNA-binding protein HU-...    69   1e-10 
ref|NP_717471.1|  DNA-binding protein, HU family [Shewanella...    69   1e-10 
ref|YP_131508.1|  putative DNA-binding protein HU-alpha [Pho...    69   1e-10 
ref|NP_721022.1|  putative DNA-binding protein [Streptococcu...    69   1e-10 
ref|NP_228079.1|  DNA-binding protein, HU [Thermotoga mariti...    69   1e-10 
ref|ZP_01182484.1|  Histone-like bacterial DNA-binding prote...    69   1e-10 
ref|ZP_01094454.1|  probable DNA-binding protein HU [Blastop...    69   1e-10 
ref|ZP_00991840.1|  Bacterial nucleoid DNA-binding protein [...    69   1e-10 
ref|ZP_00884665.1|  Histone-like bacterial DNA-binding prote...    69   1e-10 
ref|YP_846225.1|  histone family protein DNA-binding protein...    69   1e-10 
ref|ZP_00590252.1|  Histone-like bacterial DNA-binding prote...    69   1e-10 
ref|ZP_00531692.1|  Histone-like bacterial DNA-binding prote...    69   1e-10 
ref|ZP_00512756.1|  Histone-like bacterial DNA-binding prote...    69   1e-10 
ref|YP_804575.1|  nucleoid DNA-binding protein [Pediococcus ...    69   1e-10 
gb|EAD66195.1|  unknown [environmental sequence]                   68   1e-10 
ref|ZP_01576536.1|  histone-like DNA-binding protein [Clostr...    68   1e-10 
ref|ZP_01467177.1|  integration host factor, beta subunit [S...    68   1e-10 
ref|ZP_01451095.1|  histone-like protein [Mariprofundus ferr...    68   1e-10 
ref|YP_719743.1|  DNA-binding protein HU [Haemophilus somnus...    68   1e-10 
ref|YP_715978.1|  DNA-binding protein HU-beta, NS1 (HU-1) [F...    68   1e-10 
ref|ZP_01221388.1|  putative DNA-binding protein HU-alpha [P...    68   1e-10 
ref|YP_270448.1|  DNA-binding protein, HU family [Colwellia ...    68   1e-10 
ref|YP_362815.1|  histone-like protein [Xanthomonas campestr...    68   1e-10 
ref|NP_865416.1|  probable DNA-binding protein HU [Rhodopire...    68   1e-10 
sp|Q9F297|IHFA_NEIGO  Integration host factor subunit alpha ...    68   1e-10 
ref|ZP_01078205.1|  Integration host factor alpha subunit [M...    68   1e-10 
ref|YP_869254.1|  histone family protein DNA-binding protein...    68   1e-10 
ref|ZP_00581366.1|  Histone-like bacterial DNA-binding prote...    68   1e-10 
gb|EAK56450.1|  unknown [environmental sequence]                   68   2e-10 
gb|EAK44758.1|  unknown [environmental sequence]                   68   2e-10 
gb|EAJ33283.1|  unknown [environmental sequence]                   68   2e-10 
ref|ZP_01673223.1|  histone-like DNA-binding protein [Candid...    68   2e-10 
ref|YP_856844.1|  integration host factor, alpha subunit [Ae...    68   2e-10 
ref|ZP_01449928.1|  integration host factor (IHF), alpha sub...    68   2e-10 
ref|ZP_01430920.1|  histone-like DNA-binding protein [Salini...    68   2e-10 
ref|YP_944504.1|  DNA-binding protein HU alpha subunit [Psyc...    68   2e-10 
ref|YP_523501.1|  histone-like DNA-binding protein [Rhodofer...    68   2e-10 
ref|YP_413020.1|  Histone-like DNA-binding protein [Nitrosos...    68   2e-10 
ref|YP_113051.1|  DNA-binding protein HU-beta [Methylococcus...    68   2e-10 
ref|YP_288689.1|  Histone-like bacterial DNA-binding protein...    68   2e-10 
ref|YP_389702.1|  histone-like DNA-binding protein [Desulfov...    68   2e-10 
ref|YP_046095.1|  DNA-binding protein HU-beta [Acinetobacter...    68   2e-10 
ref|YP_172560.1|  DNA binding protein HU [Synechococcus elon...    68   2e-10 
ref|NP_931071.1|  DNA-binding protein HU-beta, NS1 (HU-1) [P...    68   2e-10 
ref|NP_273771.1|  integration host factor, alpha subunit [Ne...    68   2e-10 
sp|P28080|DBHA_VIBPR  DNA-binding protein HU-alpha >gi|14187...    68   2e-10 
ref|ZP_01198098.1|  Histone-like bacterial DNA-binding prote...    68   2e-10 
ref|ZP_01158696.1|  DNA-binding protein HU [Photobacterium s...    68   2e-10 
ref|ZP_01135086.1|  DNA-binding protein HU-beta (NS1) (HU-1)...    68   2e-10 
ref|ZP_00778448.1|  Histone-like bacterial DNA-binding prote...    68   2e-10 
ref|ZP_00662041.1|  Histone-like bacterial DNA-binding prote...    68   2e-10 
gb|EAJ80720.1|  unknown [environmental sequence]                   67   2e-10 
gb|EAB86812.1|  unknown [environmental sequence]                   67   2e-10 
gb|EAB81791.1|  unknown [environmental sequence]                   67   2e-10 
gb|EAE92491.1|  unknown [environmental sequence]                   67   2e-10 
gb|EAA93634.1|  unknown [environmental sequence]                   67   2e-10 
gb|EAE23017.1|  unknown [environmental sequence]                   67   2e-10 
ref|ZP_01669561.1|  histone family protein DNA-binding prote...    67   2e-10 
ref|ZP_01640915.1|  histone-like DNA-binding protein [Pseudo...    67   2e-10 
ref|YP_544128.1|  histone-like DNA-binding protein [Methylob...    67   2e-10 
ref|YP_199675.1|  histone-like protein [Xanthomonas oryzae p...    67   2e-10 
ref|YP_391927.1|  integration host factor, alpha subunit [Th...    67   2e-10 
ref|YP_375842.1|  Histone-like DNA-binding protein [Pelodict...    67   2e-10 
ref|YP_265916.1|  Integration host factor beta-subunit (IHF-...    67   2e-10 
ref|YP_248142.1|  DNA-binding protein HU [Haemophilus influe...    67   2e-10 
ref|YP_207464.1|  IfhA [Neisseria gonorrhoeae FA 1090] >gi|5...    67   2e-10 
ref|NP_661066.1|  DNA-binding protein HU-beta [Chlorobium te...    67   2e-10 
ref|NP_967677.1|  DNA-binding protein HU [Bdellovibrio bacte...    67   2e-10 
ref|NP_636359.1|  histone-like protein [Xanthomonas campestr...    67   2e-10 
ref|NP_050767.1|  DNA-binding protein hu homolog [Guillardia...    67   2e-10 
pir||E64067  DNA-binding protein HU-2 - Haemophilus influenz...    67   2e-10 
ref|YP_737673.1|  histone family protein DNA-binding protein...    67   2e-10 
ref|ZP_00591928.1|  Histone-like bacterial DNA-binding prote...    67   2e-10 
ref|YP_865225.1|  integration host factor, alpha subunit [Ma...    67   2e-10 
ref|NP_687535.1|  DNA-binding protein HU [Streptococcus agal...    67   2e-10 
ref|NP_471382.1|  hup [Listeria innocua Clip11262] >gi|16803...    67   2e-10 
ref|NP_438591.2|  DNA-binding protein HU-alpha [Haemophilus ...    67   2e-10 
gb|EAJ47502.1|  unknown [environmental sequence]                   67   3e-10 
gb|EAE38183.1|  unknown [environmental sequence]                   67   3e-10 
ref|ZP_01652536.1|  histone-like DNA-binding protein [Thermo...    67   3e-10 
ref|ZP_01593518.1|  histone-like DNA-binding protein [Geobac...    67   3e-10 
ref|YP_482700.1|  histone-like DNA-binding protein [Frankia ...    67   3e-10 
ref|YP_356840.1|  integration host factor, alpha subunit [Pe...    67   3e-10 
ref|YP_268791.1|  DNA-binding protein, HU family [Colwellia ...    67   3e-10 
ref|YP_858134.1|  DNA-binding protein HU-alpha [Aeromonas hy...    67   3e-10 
pdb|1RIY|A  Chain A, Hu Mutant V42i From Thermotoga Maritima       67   3e-10 
ref|NP_245565.1|  HimA [Pasteurella multocida subsp. multoci...    67   3e-10 
sp|Q9LA96|DBHA_AERHY  DNA-binding protein HU-alpha                 67   3e-10 
ref|ZP_00732032.1|  nucleoid DNA-binding protein [Actinobaci...    67   3e-10 
ref|ZP_00532377.1|  Histone-like bacterial DNA-binding prote...    67   3e-10 
ref|ZP_00615516.1|  Histone-like bacterial DNA-binding prote...    67   3e-10 
gb|EAI65745.1|  unknown [environmental sequence]                   67   4e-10 
gb|EAI62521.1|  unknown [environmental sequence]                   67   4e-10 
gb|EAB97099.1|  unknown [environmental sequence]                   67   4e-10 
gb|EAE43778.1|  unknown [environmental sequence]                   67   4e-10 
ref|ZP_01591562.1|  histone-like DNA-binding protein [Geobac...    67   4e-10 
ref|YP_856545.1|  DNA-binding protein HU-beta [Aeromonas hyd...    67   4e-10 
ref|ZP_01352761.1|  Histone-like bacterial DNA-binding prote...    67   4e-10 
ref|ZP_01308664.1|  DNA-binding protein HU [Oceanobacter sp....    67   4e-10 
ref|YP_463911.1|  Histone-like DNA-binding protein [Anaeromy...    67   4e-10 
emb|CAD30132.1|  small DNA-binding protein (bacterial histon...    67   4e-10 
ref|YP_269693.1|  integration host factor, alpha subunit [Co...    67   4e-10 
ref|YP_009985.1|  DNA-binding protein HU [Desulfovibrio vulg...    67   4e-10 
ref|YP_049257.1|  DNA-binding protein HU-beta [Erwinia carot...    67   4e-10 
pdb|1B8Z|A  Chain A, Hu From Thermotoga Maritima >gi|7245987...    67   4e-10 
ref|ZP_00950575.1|  probable DNA-binding protein HU [Croceib...    67   4e-10 
ref|YP_662063.1|  integration host factor, alpha subunit [Ps...    67   4e-10 
gb|EAK55735.1|  unknown [environmental sequence]                   66   5e-10 
gb|EAC53103.1|  unknown [environmental sequence] >gi|4444165...    66   5e-10 
gb|EAJ28764.1|  unknown [environmental sequence]                   66   5e-10 
gb|EAJ01215.1|  unknown [environmental sequence]                   66   5e-10 
gb|EAC79405.1|  unknown [environmental sequence]                   66   5e-10 
gb|EAC02916.1|  unknown [environmental sequence]                   66   5e-10 
gb|EAE57688.1|  unknown [environmental sequence]                   66   5e-10 
gb|EAB04304.1|  unknown [environmental sequence]                   66   5e-10 
gb|EAE23824.1|  unknown [environmental sequence]                   66   5e-10 
gb|EAD83952.1|  unknown [environmental sequence]                   66   5e-10 
ref|ZP_01665066.1|  putative DNA-binding protein hu-beta [Ra...    66   5e-10 
ref|ZP_01643031.1|  histone-like DNA-binding protein [Stenot...    66   5e-10 
ref|YP_861483.1|  histone-like bacterial DNA-binding protein...    66   5e-10 
ref|YP_818760.1|  nucleoid DNA-binding protein [Leuconostoc ...    66   5e-10 
ref|YP_593778.1|  histone-like DNA-binding protein [Acidobac...    66   5e-10 
ref|YP_284932.1|  Histone-like bacterial DNA-binding protein...    66   5e-10 
ref|NP_637809.1|  integration host factor alpha subunit [Xan...    66   5e-10 
ref|NP_269568.1|  histone-like DNA-binding protein [Streptoc...    66   5e-10 
ref|NP_455048.1|  DNA-binding protein HU-beta [Salmonella en...    66   5e-10 
ref|ZP_01161787.1|  putative DNA-binding protein HU-alpha [P...    66   5e-10 
ref|ZP_01134424.1|  integration host factor (IHF), alpha sub...    66   5e-10 
ref|ZP_01060170.1|  DNA-binding protein HU-beta (NS1) (HU-1)...    66   5e-10 
ref|ZP_00569627.1|  Histone-like bacterial DNA-binding prote...    66   5e-10 
ref|YP_516426.1|  hypothetical protein DSY0193 [Desulfitobac...    66   5e-10 
ref|ZP_00512445.1|  Histone-like bacterial DNA-binding prote...    66   5e-10 
ref|YP_910906.1|  histone family protein DNA-binding protein...    66   5e-10 
ref|ZP_00619136.1|  Histone-like bacterial DNA-binding prote...    66   5e-10 
ref|ZP_00617408.1|  Histone-like bacterial DNA-binding prote...    66   5e-10 
gb|EAE40781.1|  unknown [environmental sequence] >gi|4445073...    66   7e-10 
gb|EAH97268.1|  unknown [environmental sequence]                   66   7e-10 
gb|EAB43990.1|  unknown [environmental sequence]                   66   7e-10 
ref|ZP_01666908.1|  histone family protein DNA-binding prote...    66   7e-10 
ref|ZP_01588265.1|  histone-like DNA-binding protein [Entero...    66   7e-10 
ref|YP_898695.1|  DNA-binding protein HU-beta [Francisella t...    66   7e-10 
ref|ZP_01450883.1|  DNA-binding protein, HU family [alpha pr...    66   7e-10 
ref|YP_633781.1|  integration host factor, beta subunit [Myx...    66   7e-10 
ref|ZP_01300576.1|  hypothetical protein Rgryl_01001206 [Ric...    66   7e-10 
ref|ZP_01245239.1|  Histone-like bacterial DNA-binding prote...    66   7e-10 
gb|AAA65948.1|  HU protein                                         66   7e-10 
ref|YP_343180.1|  Integration host factor, alpha subunit [Ni...    66   7e-10 
ref|NP_927845.1|  NA-binding protein HU-alpha (NS2) (HU-2) [...    66   7e-10 
sp|P52681|DBHB_SERMA  DNA-binding protein HU-beta (NS1) (HU-...    66   7e-10 
ref|ZP_01051666.1|  DNA-binding protein HU-beta (NS1) (HU-1)...    66   7e-10 
ref|ZP_01042687.1|  Bacterial nucleoid DNA-binding protein, ...    66   7e-10 
ref|ZP_00946468.1|  DNA-binding protein HU [Ralstonia solana...    66   7e-10 
ref|YP_927104.1|  DNA-binding protein, HU family [Shewanella...    66   7e-10 
ref|YP_865973.1|  histone family protein DNA-binding protein...    66   7e-10 
ref|YP_910729.1|  histone family protein DNA-binding protein...    66   7e-10 
ref|ZP_00111515.1|  COG0776: Bacterial nucleoid DNA-binding ...    66   7e-10 
gb|EAK73151.1|  unknown [environmental sequence]                   65   9e-10 
gb|EAK67279.1|  unknown [environmental sequence]                   65   9e-10 
gb|EAI18778.1|  unknown [environmental sequence]                   65   9e-10 
gb|EAH92797.1|  unknown [environmental sequence]                   65   9e-10 
gb|EAC99340.1|  unknown [environmental sequence] >gi|4353571...    65   9e-10 
gb|EAC83607.1|  unknown [environmental sequence]                   65   9e-10 
gb|EAA92191.1|  unknown [environmental sequence]                   65   9e-10 
gb|EAA90901.1|  unknown [environmental sequence]                   65   9e-10 
ref|ZP_01594101.1|  histone-like DNA-binding protein [Geobac...    65   9e-10 
ref|NP_942963.1|  putative histone-like protein [Ralstonia e...    65   9e-10 
gb|AAX49386.1|  DNA-binding protein HU [Aeromonas hydrophila]      65   9e-10 
ref|YP_389243.1|  histone-like DNA-binding protein [Desulfov...    65   9e-10 
sp|P19436|DBH_THET8  DNA-binding protein HU (DNA-binding pro...    65   9e-10 
ref|YP_004953.1|  putative DNA binding protein [Thermus ther...    65   9e-10 
sp|P95516|IHFA_PASHA  Integration host factor subunit alpha ...    65   9e-10 
ref|NP_298033.1|  integration host factor alpha subunit [Xyl...    65   9e-10 
ref|NP_246671.1|  HupA [Pasteurella multocida subsp. multoci...    65   9e-10 
ref|NP_520642.1|  PROBABLE DNA-BINDING PROTEIN HU-BETA (NS1)...    65   9e-10 
ref|ZP_01118993.1|  DNA-binding protein HU-beta (NS1) (HU-1)...    65   9e-10 
ref|ZP_01057231.1|  integration host factor, alpha subunit [...    65   9e-10 
ref|YP_721362.1|  histone-like DNA-binding protein [Trichode...    65   9e-10 
ref|ZP_00133470.1|  COG0776: Bacterial nucleoid DNA-binding ...    65   9e-10 
ref|NP_780091.1|  integration host factor alpha subunit [Xyl...    65   9e-10 
ref|ZP_00134735.1|  COG0776: Bacterial nucleoid DNA-binding ...    65   9e-10 
ref|NP_266658.1|  HU like DNA-binding protein [Lactococcus l...    65   9e-10 
ref|NP_290632.1|  DNA-binding protein HU-alpha (HU-2) [Esche...    65   9e-10 
ref|NP_230867.1|  integration host factor alpha subunit [Vib...    65   9e-10 
gb|EAD02099.1|  unknown [environmental sequence]                   65   1e-09 
gb|EAC81100.1|  unknown [environmental sequence]                   65   1e-09 
gb|EAE70131.1|  unknown [environmental sequence]                   65   1e-09 
ref|ZP_01643618.1|  integration host factor, alpha subunit [...    65   1e-09 
ref|ZP_01506363.1|  histone-like DNA-binding protein [Burkho...    65   1e-09 
ref|ZP_01289980.1|  Histone-like bacterial DNA-binding prote...    65   1e-09 
ref|YP_378880.1|  Histone-like DNA-binding protein [Chlorobi...    65   1e-09 
ref|YP_087377.1|  HimA protein [Mannheimia succiniciproducen...    65   1e-09 
ref|NP_539794.1|  DNA-BINDING PROTEIN HU-ALPHA [Brucella mel...    65   1e-09 
ref|YP_221813.1|  DNA-binding protein HU [Brucella abortus b...    65   1e-09 
ref|NP_660393.1|  DNA-binding protein hu-alpha [Buchnera aph...    65   1e-09 
ref|NP_274254.1|  DNA-binding protein HU-beta [Neisseria men...    65   1e-09 
ref|ZP_01108981.1|  integration host factor alpha subunit [A...    65   1e-09 
ref|ZP_01085916.1|  DNA binding protein HU [Synechococcus sp...    65   1e-09 
ref|YP_901967.1|  histone family protein DNA-binding protein...    65   1e-09 
ref|YP_746898.1|  histone family protein DNA-binding protein...    65   1e-09 
ref|YP_927826.1|  integration host factor, alpha subunit [Sh...    65   1e-09 
ref|ZP_01313028.1|  histone-like DNA-binding protein [Desulf...    65   1e-09 
ref|ZP_00874559.1|  Histone-like bacterial DNA-binding prote...    65   1e-09 
ref|NP_286182.1|  DNA-binding protein HU-beta, NS1 (HU-1) [E...    65   1e-09 
ref|NP_744619.1|  integration host factor alpha subunit [Pse...    65   1e-09 
gb|EAK51357.1|  unknown [environmental sequence]                   65   1e-09 
gb|EAH79668.1|  unknown [environmental sequence]                   65   1e-09 
gb|EAI32192.1|  unknown [environmental sequence]                   65   1e-09 
gb|EAD16160.1|  unknown [environmental sequence]                   65   1e-09 
gb|EAB13389.1|  unknown [environmental sequence]                   65   1e-09 
ref|ZP_01661389.1|  putative histone-like DNA-binding protei...    65   1e-09 
ref|ZP_01607904.1|  histone family protein DNA-binding prote...    65   1e-09 
ref|ZP_01251875.1|  DNA-binding protein HU-beta (NS1) (HU-1)...    65   1e-09 
ref|YP_024677.1|  gp04 [Burkholderia cenocepacia phage BcepM...    65   1e-09 
ref|YP_204620.1|  integration host factor alpha subunit [Vib...    65   1e-09 
ref|YP_440564.1|  DNA-binding protein HU-alpha [Burkholderia...    65   1e-09 
ref|YP_379156.1|  Histone-like DNA-binding protein [Chlorobi...    65   1e-09 
ref|NP_698110.1|  DNA-binding protein HU [Brucella suis 1330...    65   1e-09 
ref|NP_457904.1|  histone like DNA-binding protein HU-alpha ...    65   1e-09 
ref|ZP_01120906.1|  DNA-binding protein HU [Robiginitalea bi...    65   1e-09 
ref|ZP_00780376.1|  HU like DNA-binding protein [Streptococc...    65   1e-09 
ref|ZP_00108786.2|  COG0776: Bacterial nucleoid DNA-binding ...    65   1e-09 
ref|ZP_00424809.1|  Histone-like bacterial DNA-binding prote...    65   1e-09 
ref|ZP_00418588.1|  Integration host factor, alpha subunit [...    65   1e-09 
ref|YP_106629.1|  DNA-binding protein HU-alpha [Burkholderia...    65   1e-09 
ref|NP_229929.1|  DNA-binding protein HU [Vibrio cholerae O1...    65   1e-09 
ref|NP_251428.1|  integration host factor subunit alpha [Pse...    65   1e-09 
gb|EAK18396.1|  unknown [environmental sequence]                   64   2e-09 
gb|EAF10293.1|  unknown [environmental sequence] >gi|4454705...    64   2e-09 
gb|EAJ69314.1|  unknown [environmental sequence]                   64   2e-09 
gb|EAF96039.1|  unknown [environmental sequence]                   64   2e-09 
gb|EAC26013.1|  unknown [environmental sequence]                   64   2e-09 
gb|EAF53113.1|  unknown [environmental sequence]                   64   2e-09 
gb|EAF16664.1|  unknown [environmental sequence]                   64   2e-09 
gb|EAE63562.1|  unknown [environmental sequence]                   64   2e-09 
ref|ZP_01589232.1|  histone-like DNA-binding protein [Entero...    64   2e-09 
ref|YP_899874.1|  histone family protein DNA-binding protein...    64   2e-09 
ref|ZP_01538614.1|  histone-like DNA-binding protein [Serrat...    64   2e-09 
ref|ZP_01524386.1|  histone-like DNA-binding protein [Fervid...    64   2e-09 
ref|YP_728109.1|  DNA-binding protein HU family [Ralstonia e...    64   2e-09 
ref|YP_692933.1|  DNA-binding protein HU [Alcanivorax borkum...    64   2e-09 
ref|YP_607610.1|  integration host factor (IHF), alpha subun...    64   2e-09 
ref|ZP_01290230.1|  Histone-like bacterial DNA-binding prote...    64   2e-09 
ref|YP_527057.1|  tRNA (uracil-5-)-methyltransferase [Saccha...    64   2e-09 
ref|YP_560980.1|  DNA-binding protein HU-alpha [Burkholderia...    64   2e-09 
ref|YP_458611.1|  integration host factor alpha-subunit [Ery...    64   2e-09 
ref|YP_389845.1|  histone-like DNA-binding protein [Desulfov...    64   2e-09 
ref|YP_454354.1|  DNA-binding protein HU-beta [Sodalis gloss...    64   2e-09 
ref|NP_929898.1|  integration host factor alpha subunit [Pho...    64   2e-09 
ref|NP_792200.1|  integration host factor alpha subunit [Pse...    64   2e-09 
ref|NP_521478.1|  PROBABLE HISTONE-LIKE DNA-BINDING PROTEIN ...    64   2e-09 
ref|ZP_01125928.1|  Integration host factor, alpha subunit [...    64   2e-09 
ref|YP_845556.1|  histone family protein DNA-binding protein...    64   2e-09 
ref|YP_612908.1|  integration host factor, alpha subunit [Si...    64   2e-09 
ref|NP_345584.1|  DNA-binding protein HU [Streptococcus pneu...    64   2e-09 
gb|EAD69261.1|  unknown [environmental sequence] >gi|4444401...    64   2e-09 
gb|EAK30827.1|  unknown [environmental sequence]                   64   2e-09 
gb|EAI29402.1|  unknown [environmental sequence]                   64   2e-09 
gb|EAH05155.1|  unknown [environmental sequence]                   64   2e-09 
gb|EAY35515.1|  integration host factor, alpha subunit [Vibr...    64   2e-09 
ref|ZP_01616867.1|  integration host factor alpha subunit [m...    64   2e-09 
ref|ZP_01528661.1|  integration host factor, alpha subunit [...    64   2e-09 
ref|YP_743839.1|  DNA-binding protein HU [Granulibacter beth...    64   2e-09 
ref|ZP_01428672.1|  histone-like DNA-binding protein [Salini...    64   2e-09 
ref|YP_496640.1|  histone-like DNA-binding protein [Novosphi...    64   2e-09 
ref|YP_461358.1|  DNA-binding protein HU [Syntrophus aciditr...    64   2e-09 
ref|YP_435701.1|  integration host factor, alpha subunit [Ha...    64   2e-09 
ref|YP_388550.1|  histone-like DNA-binding protein [Desulfov...    64   2e-09 
ref|YP_453821.1|  DNA-binding protein HU-alpha (HU-2) [Sodal...    64   2e-09 
ref|YP_065158.1|  similar to integration host factor, alpha ...    64   2e-09 
ref|YP_171151.1|  DNA binding protein HU [Synechococcus elon...    64   2e-09 
ref|ZP_01103746.1|  Integration host factor alpha-subunit [g...    64   2e-09 
ref|YP_741606.1|  integration host factor, alpha subunit [Al...    64   2e-09 
ref|ZP_00821006.1|  COG0776: Bacterial nucleoid DNA-binding ...    64   2e-09 
ref|YP_959323.1|  integration host factor, alpha subunit [Ma...    64   2e-09 
ref|YP_750398.1|  integration host factor, alpha subunit [Sh...    64   2e-09 
ref|ZP_00616474.1|  Histone-like bacterial DNA-binding prote...    64   2e-09 
ref|ZP_00049143.1|  COG0776: Bacterial nucleoid DNA-binding ...    64   2e-09 
ref|NP_406629.1|  DNA-binding protein HU-beta [Yersinia pest...    64   2e-09 
gb|EAK34847.1|  unknown [environmental sequence]                   64   3e-09 
gb|EAJ99989.1|  unknown [environmental sequence]                   64   3e-09 
gb|EAG73272.1|  unknown [environmental sequence] >gi|4440834...    64   3e-09 
gb|EAI67928.1|  unknown [environmental sequence]                   64   3e-09 
gb|EAH15202.1|  unknown [environmental sequence]                   64   3e-09 
gb|EAC19553.1|  unknown [environmental sequence]                   64   3e-09 
ref|ZP_01649290.1|  histone-like DNA-binding protein [Salini...    64   3e-09 
ref|ZP_01610183.1|  integration host factor, alpha subunit [...    64   3e-09 
ref|ZP_01605255.1|  integration host factor, alpha subunit [...    64   3e-09 
ref|ZP_01594937.1|  histone-like DNA-binding protein [Geobac...    64   3e-09 
ref|ZP_01547447.1|  Histone-like DNA-binding protein [Stappi...    64   3e-09 
ref|ZP_01542565.1|  integration host factor, alpha subunit [...    64   3e-09 
ref|YP_802654.1|  HimA [Buchnera aphidicola str. Cc (Cinara ...    64   3e-09 
gb|AAW49958.1|  hypothetical protein FTT0627 [synthetic cons...    64   3e-09 
ref|NP_717690.1|  integration host factor, alpha subunit [Sh...    64   3e-09 
ref|NP_793497.1|  DNA-binding protein HU-beta [Pseudomonas s...    64   3e-09 
ref|YP_169648.1|  Histone-like protein HU form B [Francisell...    64   3e-09 
ref|NP_519835.1|  PROBABLE DNA-BINDING PROTEIN HU-BETA [Rals...    64   3e-09 
ref|YP_139658.1|  histone-like DNA-binding protein [Streptoc...    64   3e-09 
ref|NP_778703.1|  histone-like protein [Xylella fastidiosa T...    64   3e-09 
ref|ZP_01160881.1|  integration host factor alpha subunit [P...    64   3e-09 
ref|ZP_01142913.1|  Histone-like bacterial DNA-binding prote...    64   3e-09 
ref|ZP_00942973.1|  DNA-binding protein HU [Ralstonia solana...    64   3e-09 
ref|ZP_00838393.1|  Integration host factor, alpha subunit [...    64   3e-09 
ref|YP_752811.1|  DNA-binding protein HU (DNA-binding protei...    64   3e-09 
ref|YP_865168.1|  histone family protein DNA-binding protein...    64   3e-09 
ref|YP_869502.1|  integration host factor, alpha subunit [Sh...    64   3e-09 
ref|YP_733941.1|  integration host factor, alpha subunit [Sh...    64   3e-09 
ref|YP_864027.1|  integration host factor, alpha subunit [Ma...    64   3e-09 
gb|EAH51932.1|  unknown [environmental sequence] >gi|4463407...    63   4e-09 
gb|EAH98528.1|  unknown [environmental sequence]                   63   4e-09 
gb|EAF82251.1|  unknown [environmental sequence]                   63   4e-09 
gb|EAF53204.1|  unknown [environmental sequence]                   63   4e-09 
gb|EAE16272.1|  unknown [environmental sequence]                   63   4e-09 
ref|ZP_01671456.1|  integration host factor, alpha subunit [...    63   4e-09 
ref|ZP_01625402.1|  DNA-binding protein HU-beta (NS1) (HU-1)...    63   4e-09 
ref|ZP_01592558.1|  histone-like DNA-binding protein [Geobac...    63   4e-09 
ref|ZP_01536996.1|  integration host factor, alpha subunit [...    63   4e-09 
ref|ZP_01389133.1|  Histone-like bacterial DNA-binding prote...    63   4e-09 
gb|AAT49447.1|  PA2738 [synthetic construct]                       63   4e-09 
gb|AAA26558.1|  integration host factor alpha-subunit              63   4e-09 
ref|NP_873494.1|  DNA-binding protein HU [Haemophilus ducrey...    63   4e-09 
ref|YP_065905.1|  DNA-binding protein HU [Desulfotalea psych...    63   4e-09 
sp|P23302|IHFA_SERMA  Integration host factor subunit alpha ...    63   4e-09 
sp|Q9XB22|DBH_STRDO  DNA-binding protein HU >gi|5209330|gb|A...    63   4e-09 
prf||2106156A  DNA-binding protein HU                              63   4e-09 
ref|YP_001002023.1|  integration host factor, alpha subunit ...    63   4e-09 
ref|ZP_00944760.1|  DNA-binding protein HU [Ralstonia solana...    63   4e-09 
ref|ZP_00823181.1|  COG0776: Bacterial nucleoid DNA-binding ...    63   4e-09 
ref|ZP_00106360.2|  COG0776: Bacterial nucleoid DNA-binding ...    63   4e-09 
ref|YP_585679.1|  histone-like DNA-binding protein [Ralstoni...    63   4e-09 
ref|NP_405960.1|  integration host factor alpha subunit [Yer...    63   4e-09 
gb|EAJ28837.1|  unknown [environmental sequence]                   63   6e-09 
gb|EAD23508.1|  unknown [environmental sequence]                   63   6e-09 
gb|EAC18450.1|  unknown [environmental sequence]                   63   6e-09 
gb|EAF87206.1|  unknown [environmental sequence]                   63   6e-09 
gb|EAE76903.1|  unknown [environmental sequence]                   63   6e-09 
gb|EAE47704.1|  unknown [environmental sequence]                   63   6e-09 
ref|YP_931819.1|  DNA-binding protein HU (DNA-binding protei...    63   6e-09 
ref|ZP_01386454.1|  Histone-like bacterial DNA-binding prote...    63   6e-09 
emb|CAK99236.1|  probable dna-binding protein hu2 [Spiroplas...    63   6e-09 
ref|ZP_01218635.1|  integration host factor alpha subunit [P...    63   6e-09 
ref|YP_220427.1|  ORF98 [Leptospirillum ferrooxidans] >gi|61...    63   6e-09 
ref|YP_497635.1|  integration host factor, alpha subunit [No...    63   6e-09 
ref|YP_315432.1|  Histone-like DNA-binding protein [Thiobaci...    63   6e-09 
ref|YP_155782.1|  Bacterial nucleoid DNA-binding protein, IH...    63   6e-09 
ref|YP_011013.1|  DNA-binding protein HU [Desulfovibrio vulg...    63   6e-09 
ref|NP_901833.1|  DNA-binding protein hu-beta [Chromobacteri...    63   6e-09 
ref|NP_902224.1|  DNA-binding protein hu-beta [Chromobacteri...    63   6e-09 
ref|YP_159038.1|  DNA-binding protein hu-alpha [Azoarcus sp....    63   6e-09 
ref|YP_120423.1|  putative histone-like DNA-binding protein ...    63   6e-09 
ref|YP_130354.1|  integration host factor alpha subunit [Pho...    63   6e-09 
ref|NP_758638.1|  DNA binding protein [Pseudomonas resinovor...    63   6e-09 
ref|YP_261084.1|  DNA-binding protein HU, beta subunit [Pseu...    63   6e-09 
pir||S12888  DNA-binding protein II - Thermus aquaticus >gi|...    63   6e-09 
ref|NP_761222.1|  integration host factor alpha subunit [Vib...    63   6e-09 
ref|ZP_00955014.1|  integration host factor, alpha subunit [...    63   6e-09 
ref|YP_901541.1|  histone family protein DNA-binding protein...    63   6e-09 
gb|EAC58757.1|  unknown [environmental sequence]                   62   7e-09 
gb|EAB67652.1|  unknown [environmental sequence]                   62   7e-09 
gb|EAF05602.1|  unknown [environmental sequence]                   62   7e-09 
gb|EAB39265.1|  unknown [environmental sequence]                   62   7e-09 
ref|ZP_01599229.1|  integration host factor, alpha subunit [...    62   7e-09 
ref|ZP_01594875.1|  histone-like DNA-binding protein [Geobac...    62   7e-09 
ref|ZP_01304053.1|  histone-like DNA-binding protein [Sphing...    62   7e-09 
ref|ZP_01302517.1|  integration host factor, alpha subunit [...    62   7e-09 
ref|YP_562611.1|  integration host factor, alpha subunit [Sh...    62   7e-09 
ref|YP_462508.1|  DNA-binding protein HU [Syntrophus aciditr...    62   7e-09 
ref|YP_344938.1|  Histone-like DNA-binding protein [Nitrosoc...    62   7e-09 
ref|YP_297594.1|  Histone-like bacterial DNA-binding protein...    62   7e-09 
ref|YP_064636.1|  DNA-binding protein HU [Desulfotalea psych...    62   7e-09 
ref|NP_842209.1|  Bacterial histone-like DNA-binding protein...    62   7e-09 
sp|P52680|DBHA_SERMA  DNA-binding protein HU-alpha (NS2) (HU...    62   7e-09 
ref|NP_440778.1|  DNA binding protein HU [Synechocystis sp. ...    62   7e-09 
sp|P73418|DBH_SYNY3  DNA-binding protein HU                        62   7e-09 
sp|P0A3H3|DBH1_RHILE  DNA-binding protein HRL18 >gi|61222641...    62   7e-09 
ref|YP_873347.1|  histone family protein DNA-binding protein...    62   7e-09 
ref|ZP_01079539.1|  DNA binding protein HU [Synechococcus sp...    62   7e-09 
ref|ZP_00582308.1|  Integration host factor, alpha subunit [...    62   7e-09 
gb|EAI41094.1|  unknown [environmental sequence] >gi|4457643...    62   9e-09 
gb|EAI61295.1|  unknown [environmental sequence]                   62   9e-09 
gb|EAH92459.1|  unknown [environmental sequence]                   62   9e-09 
gb|EAH25323.1|  unknown [environmental sequence]                   62   9e-09 
gb|EAC72974.1|  unknown [environmental sequence]                   62   9e-09 
gb|EAB78175.1|  unknown [environmental sequence]                   62   9e-09 
gb|EAF14536.1|  unknown [environmental sequence]                   62   9e-09 
gb|EAF01149.1|  unknown [environmental sequence]                   62   9e-09 
gb|EAA94725.1|  unknown [environmental sequence]                   62   9e-09 
ref|YP_001004681.1|  DNA-binding protein HU-alpha [Yersinia ...    62   9e-09 
ref|YP_767295.1|  putative DNA-binding protein HU [Rhizobium...    62   9e-09 
ref|ZP_01451686.1|  DNA-binding protein HU [Mariprofundus fe...    62   9e-09 
ref|ZP_01440145.1|  histone-like protein [Fulvimarina pelagi...    62   9e-09 
ref|ZP_01309114.1|  hypothetical protein CburR_01001879 [Cox...    62   9e-09 
emb|CAJ74047.1|  unknown protein [Candidatus Kuenenia stuttg...    62   9e-09 
ref|YP_465177.1|  integration host factor, alpha subunit [An...    62   9e-09 
gb|AAR37675.1|  DNA-binding protein HU [uncultured bacterium...    62   9e-09 
ref|YP_573856.1|  integration host factor, alpha subunit [Ch...    62   9e-09 
ref|YP_457628.1|  histone-like protein [Erythrobacter litora...    62   9e-09 
ref|YP_167711.1|  integration host factor, alpha subunit [Si...    62   9e-09 
ref|YP_088281.1|  HimA protein [Mannheimia succiniciproducen...    62   9e-09 
ref|YP_161663.1|  hypothetical DNA-binding protein HU-beta N...    62   9e-09 
ref|YP_048365.1|  DNA-binding protein HU-alpha [Erwinia caro...    62   9e-09 
ref|NP_873895.1|  integration host factor, alpha chain [Haem...    62   9e-09 
ref|NP_896680.1|  DNA binding protein HU [Synechococcus sp. ...    62   9e-09 
ref|YP_469119.1|  bacterial nucleoid DNA-binding protein [Rh...    62   9e-09 
ref|NP_797673.1|  integration host factor alpha subunit [Vib...    62   9e-09 
ref|ZP_00999188.1|  integration host factor, alpha subunit [...    62   9e-09 
ref|ZP_01259219.1|  integration host factor alpha subunit [V...    62   9e-09 
ref|YP_826406.1|  histone family protein DNA-binding protein...    62   9e-09 
ref|YP_865961.1|  histone family protein DNA-binding protein...    62   9e-09 
ref|NP_487975.1|  DNA binding protein HU [Nostoc sp. PCC 712...    62   9e-09 
gb|EAB06237.1|  unknown [environmental sequence] >gi|4398451...    62   1e-08 
gb|EAJ92193.1|  unknown [environmental sequence]                   62   1e-08 
gb|EAJ52869.1|  unknown [environmental sequence] >gi|4447483...    62   1e-08 
gb|EAF06832.1|  unknown [environmental sequence] >gi|4435247...    62   1e-08 
gb|EAE06868.1|  unknown [environmental sequence] >gi|4435060...    62   1e-08 
gb|EAI13963.1|  unknown [environmental sequence]                   62   1e-08 
gb|EAC74278.1|  unknown [environmental sequence]                   62   1e-08 
gb|EAF54614.1|  unknown [environmental sequence]                   62   1e-08 
gb|EAB31875.1|  unknown [environmental sequence]                   62   1e-08 
ref|ZP_01658798.1|  histone-like DNA-binding protein [Parvib...    62   1e-08 
ref|YP_903620.1|  histone family protein DNA-binding protein...    62   1e-08 
ref|ZP_01503332.1|  histone-like DNA-binding protein [Burkho...    62   1e-08 
ref|YP_683351.1|  integration host factor, alpha subunit [Ro...    62   1e-08 
gb|ABA24680.1|  Histone-like DNA-binding protein [Anabaena v...    62   1e-08 
ref|YP_095882.1|  HupB DNA binding protein HU-beta [Legionel...    62   1e-08 
ref|YP_464698.1|  Histone-like DNA-binding protein [Anaeromy...    62   1e-08 
ref|NP_875792.1|  Bacterial nucleoid DNA-binding protein [Pr...    62   1e-08 
ref|YP_257126.1|  hypothetical protein pSG3GP_17 [Sodalis gl...    62   1e-08 
ref|YP_127160.1|  hypothetical protein lpl1822 [Legionella p...    62   1e-08 
ref|YP_066519.1|  integration host factor, alpha-subunit [De...    62   1e-08 
ref|NP_893438.1|  Bacterial histone-like DNA-binding protein...    62   1e-08 
dbj|BAB88647.1|  histone-like protein [Streptococcus interme...    62   1e-08 
ref|NP_683057.1|  DNA-binding protein HU [Thermosynechococcu...    62   1e-08 
ref|ZP_01115548.1|  integration host factor alpha subunit [R...    62   1e-08 
ref|ZP_01034366.1|  integration host factor, alpha subunit [...    62   1e-08 
ref|ZP_00990216.1|  integration host factor alpha subunit [V...    62   1e-08 
ref|ZP_01682684.1|  integration host factor, alpha subunit [...    62   1e-08 
ref|YP_753346.1|  non-specific DNA-binding protein HBsu [Syn...    62   1e-08 
ref|ZP_00588460.1|  Histone-like bacterial DNA-binding prote...    62   1e-08 
ref|ZP_00417144.1|  Histone-like bacterial DNA-binding prote...    62   1e-08 
ref|NP_407181.1|  DNA-binding protein HU-alpha [Yersinia pes...    62   1e-08 
gb|EAJ49953.1|  unknown [environmental sequence]                   61   2e-08 
gb|EAH55757.1|  unknown [environmental sequence]                   61   2e-08 
gb|EAF78397.1|  unknown [environmental sequence]                   61   2e-08 
gb|EAB35020.1|  unknown [environmental sequence]                   61   2e-08 
gb|EAE47964.1|  unknown [environmental sequence]                   61   2e-08 
ref|ZP_01537584.1|  histone-like DNA-binding protein [Serrat...    61   2e-08 
ref|ZP_01442276.1|  integration host factor, alpha subunit [...    61   2e-08 
ref|YP_731390.1|  DNA-binding protein HU [Synechococcus sp. ...    61   2e-08 
ref|YP_693556.1|  Bacterial nucleoid DNA-binding protein [Al...    61   2e-08 
ref|ZP_01288063.1|  Histone-like bacterial DNA-binding prote...    61   2e-08 
gb|AAR29587.1|  Fp91 [Flavobacterium psychrophilum]                61   2e-08 
ref|YP_207903.1|  DbhA [Neisseria gonorrhoeae FA 1090] >gi|5...    61   2e-08 
ref|NP_953169.1|  integration host factor, alpha subunit [Ge...    61   2e-08 
ref|NP_923778.1|  DNA binding protein HU [Gloeobacter violac...    61   2e-08 
ref|NP_108567.1|  DNA-binding protein HRm [Mesorhizobium lot...    61   2e-08 
sp|Q9XB20|DBH_STRGN  DNA-binding protein HU >gi|5209334|gb|A...    61   2e-08 
ref|ZP_01198040.1|  Integration host factor, alpha subunit [...    61   2e-08 
ref|ZP_01188476.1|  Histone-like bacterial DNA-binding prote...    61   2e-08 
ref|ZP_01139877.1|  Histone-like bacterial DNA-binding prote...    61   2e-08 
ref|ZP_00339941.1|  COG0776: Bacterial nucleoid DNA-binding ...    61   2e-08 
gb|EAK50083.1|  unknown [environmental sequence]                   61   2e-08 
gb|EAA95864.1|  unknown [environmental sequence] >gi|4309642...    61   2e-08 
gb|EAH62316.1|  unknown [environmental sequence]                   61   2e-08 
gb|EAC18299.1|  unknown [environmental sequence]                   61   2e-08 
sp|Q4UKH2|DBH_RICFE  DNA-binding protein HU                        61   2e-08 
ref|ZP_01629164.1|  Histone-like DNA-binding protein [Nodula...    61   2e-08 
ref|YP_840755.1|  DNA-binding protein HU family [Ralstonia e...    61   2e-08 
ref|YP_590262.1|  histone-like DNA-binding protein [Acidobac...    61   2e-08 
ref|YP_001009910.1|  Bacterial histone-like DNA-binding prot...    61   2e-08 
ref|YP_522607.1|  integration host factor, alpha subunit [Rh...    61   2e-08 
ref|YP_376591.1|  Histone-like DNA-binding protein [Synechoc...    61   2e-08 
ref|YP_247124.1|  DNA-binding protein HU [Rickettsia felis U...    61   2e-08 
ref|NP_952572.1|  integration host factor, alpha subunit [Ge...    61   2e-08 
ref|YP_384376.1|  Histone-like DNA-binding protein [Geobacte...    61   2e-08 
ref|NP_354272.1|  hypothetical protein AGR_C_2331 [Agrobacte...    61   2e-08 
ref|YP_455104.1|  integration host factor alpha subunit [Sod...    61   2e-08 
ref|YP_050511.1|  integration host factor alpha subunit [Erw...    61   2e-08 
ref|YP_033424.1|  DNA-binding protein [Bartonella henselae s...    61   2e-08 
sp|Q9ZDZ2|DBH_RICPR  DNA-binding protein HU                        61   2e-08 
sp|Q92J57|DBH_RICCN  DNA-binding protein HU                        61   2e-08 
ref|NP_359849.1|  DNA-binding protein HU [Rickettsia conorii...    61   2e-08 
ref|NP_220561.1|  DNA-BINDING PROTEIN HU (hupA) [Rickettsia ...    61   2e-08 
prf||2103146A  HU protein                                          61   2e-08 
sp|P37982|IHFA_DICD3  Integration host factor subunit alpha ...    61   2e-08 
ref|ZP_00827808.1|  COG0776: Bacterial nucleoid DNA-binding ...    61   2e-08 
ref|ZP_00821068.1|  COG0776: Bacterial nucleoid DNA-binding ...    61   2e-08 
ref|YP_750129.1|  histone family protein DNA-binding protein...    61   2e-08 
ref|ZP_00142314.1|  DNA-binding protein HU [Rickettsia sibir...    61   2e-08 
ref|ZP_00652789.1|  Histone-like bacterial DNA-binding prote...    61   2e-08 
gb|EAI43908.1|  unknown [environmental sequence]                   60   3e-08 
gb|EAG31496.1|  unknown [environmental sequence]                   60   3e-08 
gb|EAG25476.1|  unknown [environmental sequence]                   60   3e-08 
gb|EAA84989.1|  unknown [environmental sequence]                   60   3e-08 
gb|EAD85228.1|  unknown [environmental sequence]                   60   3e-08 
ref|XP_001307951.1|  DNA-binding protein HU, putative [Trich...    60   3e-08 
ref|ZP_01675015.1|  histone-like DNA-binding protein [Candid...    60   3e-08 
ref|ZP_01627342.1|  integration host factor subunit alpha [m...    60   3e-08 
ref|ZP_01615532.1|  probable DNA-binding protein [marine gam...    60   3e-08 
ref|ZP_01591304.1|  integration host factor, alpha subunit [...    60   3e-08 
ref|YP_706432.1|  DNA-binding protein [Rhodococcus sp. RHA1]...    60   3e-08 
ref|ZP_01227331.1|  integration host factor [Aurantimonas sp...    60   3e-08 
emb|CAA34713.1|  integration host factor (AA 1-99) [Salmonel...    60   3e-08 
ref|YP_391449.1|  Histone-like DNA-binding protein [Thiomicr...    60   3e-08 
ref|YP_113209.1|  integration host factor, alpha subunit [Me...    60   3e-08 
ref|NP_926370.1|  DNA binding protein HU [Gloeobacter violac...    60   3e-08 
sp|P30787|IHFA_RHOCA  Integration host factor subunit alpha ...    60   3e-08 
ref|NP_298480.1|  histone-like protein [Xylella fastidiosa 9...    60   3e-08 
ref|NP_456172.1|  integration host factor alpha subunit [Sal...    60   3e-08 
ref|ZP_01157023.1|  integration host factor, alpha subunit [...    60   3e-08 
ref|ZP_01039169.1|  hypothetical protein NAP1_02670 [Erythro...    60   3e-08 
ref|ZP_00960891.1|  integration host factor, alpha subunit [...    60   3e-08 
ref|ZP_00705855.1|  COG0776: Bacterial nucleoid DNA-binding ...    60   3e-08 
ref|YP_298239.1|  Histone-like bacterial DNA-binding protein...    60   3e-08 
ref|NP_288146.1|  integration host factor alpha subunit [Esc...    60   3e-08 
gb|EAJ25693.1|  unknown [environmental sequence]                   60   4e-08 
gb|EAC91685.1|  unknown [environmental sequence]                   60   4e-08 
gb|EAC38644.1|  unknown [environmental sequence]                   60   4e-08 
gb|EAB84210.1|  unknown [environmental sequence]                   60   4e-08 
gb|EAB43813.1|  unknown [environmental sequence]                   60   4e-08 
ref|ZP_01551718.1|  Bacterial nucleoid DNA-binding protein [...    60   4e-08 
ref|NP_214492.1|  integration host factor beta subunit [Aqui...    60   4e-08 
ref|YP_032184.1|  DNA-binding protein [Bartonella quintana s...    60   4e-08 
ref|NP_926491.1|  probable DNA binding protein HU [Gloeobact...    60   4e-08 
ref|NP_895222.1|  Bacterial DNA-binding protein [Prochloroco...    60   4e-08 
ref|NP_239873.1|  DNA-binding protein hu-alpha [Buchnera aph...    60   4e-08 
ref|ZP_00733114.1|  nucleoid DNA-binding protein [Actinobaci...    60   4e-08 
ref|YP_616464.1|  integration host factor, alpha subunit [Sp...    60   4e-08 
ref|ZP_00969624.1|  COG0776: Bacterial nucleoid DNA-binding ...    60   4e-08 
gb|EAJ76140.1|  unknown [environmental sequence]                   60   5e-08 
gb|EAK41861.1|  unknown [environmental sequence]                   60   5e-08 
gb|EAH96960.1|  unknown [environmental sequence]                   60   5e-08 
gb|EAH11325.1|  unknown [environmental sequence]                   60   5e-08 
gb|EAB93395.1|  unknown [environmental sequence]                   60   5e-08 
ref|ZP_01462754.1|  integration host factor, alpha subunit [...    60   5e-08 
ref|ZP_01449196.1|  integration host factor, alpha subunit [...    60   5e-08 
ref|ZP_01279836.1|  Histone-like bacterial DNA-binding prote...    60   5e-08 
ref|YP_016178.1|  bacterial nucleoid DNA-binding protein HU ...    60   5e-08 
ref|YP_053442.1|  predicted histone-like DNA-binding protein...    60   5e-08 
ref|YP_292086.1|  histone-like bacterial DNA-binding protein...    60   5e-08 
ref|YP_631785.1|  integration host factor, alpha subunit [My...    60   5e-08 
ref|NP_284578.1|  DNA-binding protein HU-beta [Neisseria men...    60   5e-08 
ref|YP_001003150.1|  histone family protein DNA-binding prot...    60   5e-08 
ref|ZP_01004905.1|  Bacterial nucleoid DNA-binding protein [...    60   5e-08 
ref|ZP_00132076.1|  COG0776: Bacterial nucleoid DNA-binding ...    60   5e-08 
gb|EAK73441.1|  unknown [environmental sequence]                   59   6e-08 
gb|EAJ94692.1|  unknown [environmental sequence]                   59   6e-08 
gb|EAJ45346.1|  unknown [environmental sequence]                   59   6e-08 
gb|EAJ27010.1|  unknown [environmental sequence]                   59   6e-08 
gb|EAI16611.1|  unknown [environmental sequence]                   59   6e-08 
gb|EAG84767.1|  unknown [environmental sequence]                   59   6e-08 
gb|EAG25856.1|  unknown [environmental sequence]                   59   6e-08 
gb|EAC71308.1|  unknown [environmental sequence]                   59   6e-08 
gb|EAF07689.1|  unknown [environmental sequence]                   59   6e-08 
ref|YP_745125.1|  DNA-binding protein HU [Granulibacter beth...    59   6e-08 
ref|YP_942821.1|  integration host factor, alpha subunit [Ps...    59   6e-08 
ref|ZP_01305723.1|  integration host factor alpha subunit [O...    59   6e-08 
emb|CAB46606.1|  HimA protein [Yersinia pseudotuberculosis]        59   6e-08 
ref|YP_067128.1|  DNA-binding protein HU [Rickettsia typhi s...    59   6e-08 
ref|YP_263160.1|  integration host factor, beta subunit, put...    59   6e-08 
ref|YP_286711.1|  Histone-like bacterial DNA-binding protein...    59   6e-08 
ref|YP_351328.1|  Histone-like DNA-binding protein [Pseudomo...    59   6e-08 
ref|YP_421386.1|  Bacterial nucleoid DNA-binding protein [Ma...    59   6e-08 
ref|NP_975400.1|  DNA-binding protein HU (HB) [Mycoplasma my...    59   6e-08 
ref|ZP_01108281.1|  DNA-binding protein HU-beta (NS1) (HU-1)...    59   6e-08 
ref|ZP_00054041.2|  COG0776: Bacterial nucleoid DNA-binding ...    59   6e-08 
ref|YP_352669.1|  Histone-like DNA-binding protein (IHF) [Rh...    59   6e-08 
ref|YP_673733.1|  histone-like DNA-binding protein [Mesorhiz...    59   6e-08 
ref|ZP_00514229.1|  Histone-like bacterial DNA-binding prote...    59   6e-08 
ref|YP_864839.1|  histone family protein DNA-binding protein...    59   6e-08 
gb|EAK40926.1|  unknown [environmental sequence]                   59   8e-08 
gb|EAG90940.1|  unknown [environmental sequence]                   59   8e-08 
gb|EAD01816.1|  unknown [environmental sequence]                   59   8e-08 
gb|EAG08684.1|  unknown [environmental sequence]                   59   8e-08 
gb|EAB39964.1|  unknown [environmental sequence]                   59   8e-08 
gb|EAB02081.1|  unknown [environmental sequence]                   59   8e-08 
gb|EAA84606.1|  unknown [environmental sequence]                   59   8e-08 
ref|ZP_01622148.1|  Histone-like DNA-binding protein [Lyngby...    59   8e-08 
ref|YP_883003.1|  DNA-binding protein HU [Mycobacterium aviu...    59   8e-08 
emb|CAJ70400.1|  DNA-binding protein HU [Clostridium diffici...    59   8e-08 
ref|YP_679342.1|  DNA-binding protein HU-beta [Cytophaga hut...    59   8e-08 
ref|ZP_01225243.1|  integration host factor, alpha subunit [...    59   8e-08 
ref|YP_575292.1|  histone-like DNA-binding protein [Chromoha...    59   8e-08 
ref|YP_096714.1|  integration host factor (IHF) alpha subuni...    59   8e-08 
ref|NP_961958.1|  HupB [Mycobacterium avium subsp. paratuber...    59   8e-08 
ref|YP_127965.1|  hypothetical protein lpl2637 [Legionella p...    59   8e-08 
ref|YP_101694.1|  DNA-binding protein HU-beta [Bacteroides f...    59   8e-08 
ref|NP_970122.1|  putative DNA-binding protein HU-beta [Bdel...    59   8e-08 
ref|NP_871512.1|  hypothetical protein WGLp509 [Wigglesworth...    59   8e-08 
ref|ZP_01003698.1|  Histone-like DNA-binding protein (IHF) [...    59   8e-08 
ref|ZP_00053339.1|  COG0776: Bacterial nucleoid DNA-binding ...    59   8e-08 
gb|EAJ81631.1|  unknown [environmental sequence]                   59   1e-07 
gb|EAI67115.1|  unknown [environmental sequence]                   59   1e-07 
gb|EAH15089.1|  unknown [environmental sequence]                   59   1e-07 
gb|EAB91885.1|  unknown [environmental sequence]                   59   1e-07 
gb|EAD97966.1|  unknown [environmental sequence]                   59   1e-07 
ref|YP_545521.1|  histone-like DNA-binding protein [Methylob...    59   1e-07 
gb|AAT49327.1|  PA5348 [synthetic construct]                       59   1e-07 
ref|YP_265275.1|  histone-like bacterial DNA-binding protein...    59   1e-07 
ref|YP_516210.1|  DNA-binding protein HU-beta [Sodalis phage...    59   1e-07 
ref|YP_988864.1|  DNA-binding protein HU-beta [Bartonella ba...    59   1e-07 
ref|ZP_00710005.1|  COG0776: Bacterial nucleoid DNA-binding ...    59   1e-07 
ref|YP_901579.1|  histone family protein DNA-binding protein...    59   1e-07 
ref|ZP_00208599.1|  COG0776: Bacterial nucleoid DNA-binding ...    59   1e-07 
ref|NP_254035.1|  probable DNA-binding protein [Pseudomonas ...    59   1e-07 
gb|EAK75915.1|  unknown [environmental sequence]                   58   1e-07 
gb|EAE08882.1|  unknown [environmental sequence] >gi|4456115...    58   1e-07 
gb|EAG29297.1|  unknown [environmental sequence]                   58   1e-07 
ref|ZP_01641273.1|  histone-like DNA-binding protein [Pseudo...    58   1e-07 
ref|ZP_01586198.1|  integration host factor, alpha subunit [...    58   1e-07 
emb|CAJ49675.1|  integration host factor alpha-subunit [Bord...    58   1e-07 
ref|YP_744836.1|  integration host factor alpha-subunit [Gra...    58   1e-07 
ref|ZP_01347298.1|  hypothetical protein RcanM_01000193 [Ric...    58   1e-07 
ref|YP_431885.1|  Bacterial nucleoid DNA-binding protein [Ha...    58   1e-07 
ref|YP_421718.1|  Bacterial nucleoid DNA-binding protein [Ma...    58   1e-07 
ref|NP_881199.1|  integration host factor alpha subunit [Bor...    58   1e-07 
ref|NP_884824.1|  integration host factor alpha subunit [Bor...    58   1e-07 
ref|NP_629690.1|  histone-like DNA binding protein [Streptom...    58   1e-07 
ref|ZP_00951759.1|  integration host factor, alpha subunit [...    58   1e-07 
ref|YP_844141.1|  histone family protein DNA-binding protein...    58   1e-07 
ref|ZP_00054478.1|  COG0776: Bacterial nucleoid DNA-binding ...    58   1e-07 
gb|EAI96620.1|  unknown [environmental sequence]                   58   2e-07 
gb|EAI63957.1|  unknown [environmental sequence]                   58   2e-07 
gb|EAH79004.1|  unknown [environmental sequence]                   58   2e-07 
gb|EAF73314.1|  unknown [environmental sequence]                   58   2e-07 
gb|EAF47834.1|  unknown [environmental sequence]                   58   2e-07 
gb|EAB72479.1|  unknown [environmental sequence]                   58   2e-07 
gb|EAB23550.1|  unknown [environmental sequence]                   58   2e-07 
gb|EAD85156.1|  unknown [environmental sequence]                   58   2e-07 
ref|ZP_01552430.1|  integration host factor subunit alpha [M...    58   2e-07 
ref|ZP_01526761.1|  histone-like DNA-binding protein [Pseudo...    58   2e-07 
ref|ZP_01415608.1|  nucleoid DNA-binding protein-like [Sinor...    58   2e-07 
ref|YP_615852.1|  histone-like DNA-binding protein [Sphingop...    58   2e-07 
ref|YP_588518.1|  DNA-binding protein HU-alpha [Baumannia ci...    58   2e-07 
ref|ZP_01289479.1|  Histone-like bacterial DNA-binding prote...    58   2e-07 
ref|YP_313765.1|  Histone-like DNA-binding protein [Thiobaci...    58   2e-07 
ref|YP_548933.1|  integration host factor, alpha subunit [Po...    58   2e-07 
ref|YP_426755.1|  Integration host factor, alpha subunit [Rh...    58   2e-07 
ref|NP_820310.1|  integration host factor, alpha subunit [Co...    58   2e-07 
ref|NP_603921.1|  DNA-binding protein HU [Fusobacterium nucl...    58   2e-07 
ref|NP_385364.1|  HISTONE-LIKE PROTEIN [Sinorhizobium melilo...    58   2e-07 
ref|ZP_01143814.1|  integration host factor, alpha subunit [...    58   2e-07 
ref|ZP_01018264.1|  Bacterial nucleoid DNA-binding protein H...    58   2e-07 
ref|ZP_01015410.1|  Histone-like DNA-binding protein (IHF) [...    58   2e-07 
ref|ZP_00629602.1|  Integration host factor, alpha subunit [...    58   2e-07 
ref|ZP_00533436.1|  Histone-like bacterial DNA-binding prote...    58   2e-07 
ref|YP_865039.1|  histone family protein DNA-binding protein...    58   2e-07 
gb|EAJ78636.1|  unknown [environmental sequence]                   57   2e-07 
gb|EAJ68965.1|  unknown [environmental sequence]                   57   2e-07 
gb|EAG93324.1|  unknown [environmental sequence]                   57   2e-07 
gb|EAC55364.1|  unknown [environmental sequence]                   57   2e-07 
gb|EAB95087.1|  unknown [environmental sequence]                   57   2e-07 
gb|EAF39411.1|  unknown [environmental sequence]                   57   2e-07 
gb|EAB32814.1|  unknown [environmental sequence]                   57   2e-07 
gb|EAB28386.1|  unknown [environmental sequence]                   57   2e-07 
ref|YP_971195.1|  histone family protein DNA-binding protein...    57   2e-07 
ref|YP_997846.1|  histone family protein DNA-binding protein...    57   2e-07 
gb|AAX89117.1|  laminin-binding protein [Mycobacterium ulcer...    57   2e-07 
gb|AAX89115.1|  laminin-binding protein [Mycobacterium ulcer...    57   2e-07 
ref|YP_905888.1|  DNA-binding protein Hu HupB-like protein [...    57   2e-07 
gb|AAX89118.1|  laminin-binding protein [Mycobacterium ulcer...    57   2e-07 
gb|AAX89119.1|  laminin-binding protein [Mycobacterium ulcer...    57   2e-07 
gb|AAX89120.1|  laminin-binding protein [Mycobacterium ulcer...    57   2e-07 
gb|AAX89121.1|  laminin-binding protein [Mycobacterium ulcer...    57   2e-07 
gb|AAX89116.1|  laminin-binding protein [Mycobacterium ulcer...    57   2e-07 
ref|ZP_01215142.1|  integration host factor alpha subunit [P...    57   2e-07 
ref|YP_952958.1|  histone family protein DNA-binding protein...    57   2e-07 
ref|YP_509725.1|  integration host factor, alpha subunit [Ja...    57   2e-07 
emb|CAB46493.1|  histone-like protein [Mycobacterium bovis]        57   2e-07 
ref|NP_823860.1|  histone-like DNA-binding protein [Streptom...    57   2e-07 
ref|YP_190536.1|  DNA-binding protein HU [Gluconobacter oxyd...    57   2e-07 
ref|YP_426640.1|  Histone-like DNA-binding protein [Rhodospi...    57   2e-07 
ref|YP_047563.1|  integration host factor (IHF), alpha subun...    57   2e-07 
ref|NP_890188.1|  histone-like DNA-binding protein [Bordetel...    57   2e-07 
ref|YP_979091.1|  putative DNA-binding protein HU homolog hu...    57   2e-07 
ref|YP_886729.1|  DNA-binding protein HU [Mycobacterium smeg...    57   2e-07 
ref|NP_302157.1|  probable histone-like protein [Mycobacteri...    57   2e-07 
ref|ZP_01190769.1|  Histone-like bacterial DNA-binding prote...    57   2e-07 
ref|ZP_01108225.1|  DNA-binding protein HU [Flavobacteriales...    57   2e-07 
ref|YP_983070.1|  integration host factor, alpha subunit [Po...    57   2e-07 
ref|YP_581558.1|  histone-like DNA-binding protein [Psychrob...    57   2e-07 
ref|YP_924485.1|  histone family protein DNA-binding protein...    57   2e-07 
ref|NP_217502.1|  PROBABLE DNA-BINDING PROTEIN HU HOMOLOG HU...    57   2e-07 
ref|NP_743136.1|  DNA-binding protein HU, form N [Pseudomona...    57   2e-07 
gb|EAK31454.1|  unknown [environmental sequence]                   57   3e-07 
gb|EAK28278.1|  unknown [environmental sequence]                   57   3e-07 
gb|EAK22211.1|  unknown [environmental sequence]                   57   3e-07 
gb|EAJ95314.1|  unknown [environmental sequence]                   57   3e-07 
gb|EAH59353.1|  unknown [environmental sequence]                   57   3e-07 
gb|EAH16086.1|  unknown [environmental sequence]                   57   3e-07 
gb|EAF53603.1|  unknown [environmental sequence]                   57   3e-07 
gb|EAB52155.1|  unknown [environmental sequence]                   57   3e-07 
ref|ZP_01659130.1|  integration host factor, alpha subunit [...    57   3e-07 
ref|ZP_01621896.1|  Histone-like DNA-binding protein [Lyngby...    57   3e-07 
ref|ZP_01437730.1|  integration host factor alpha subunit [F...    57   3e-07 
ref|YP_277186.1|  DNA-binding protein HU family [Pseudomonas...    57   3e-07 
ref|YP_422152.1|  Bacterial nucleoid DNA-binding protein [Ma...    57   3e-07 
gb|EAI62678.1|  unknown [environmental sequence]                   57   4e-07 
gb|EAH70955.1|  unknown [environmental sequence]                   57   4e-07 
gb|EAD68722.1|  unknown [environmental sequence]                   57   4e-07 
gb|EAG80081.1|  unknown [environmental sequence]                   57   4e-07 
gb|EAD04781.1|  unknown [environmental sequence]                   57   4e-07 
gb|EAC88864.1|  unknown [environmental sequence]                   57   4e-07 
gb|EAC88580.1|  unknown [environmental sequence]                   57   4e-07 
gb|EAE47513.1|  unknown [environmental sequence]                   57   4e-07 
gb|EAE19239.1|  unknown [environmental sequence]                   57   4e-07 
ref|ZP_01451358.1|  integration host factor, alpha subunit [...    57   4e-07 
ref|ZP_01292632.1|  hypothetical protein PaerP_01005466 [Pse...    57   4e-07 
ref|YP_562508.1|  histone-like DNA-binding protein [Shewanel...    57   4e-07 
ref|YP_546828.1|  histone-like DNA-binding protein [Methylob...    57   4e-07 
ref|NP_239963.1|  integration host factor alpha-subunit [Buc...    57   4e-07 
ref|ZP_01040216.1|  integration host factor alpha-subunit [E...    57   4e-07 
ref|YP_901561.1|  histone family protein DNA-binding protein...    57   4e-07 
gb|EAD40721.1|  unknown [environmental sequence] >gi|4354784...    56   5e-07 
gb|EAK03300.1|  unknown [environmental sequence]                   56   5e-07 
gb|EAJ61773.1|  unknown [environmental sequence]                   56   5e-07 
gb|EAD77280.1|  unknown [environmental sequence]                   56   5e-07 
gb|EAD86749.1|  unknown [environmental sequence]                   56   5e-07 
gb|EAD84652.1|  unknown [environmental sequence]                   56   5e-07 
ref|ZP_01578094.1|  integration host factor, alpha subunit [...    56   5e-07 
ref|YP_725852.1|  integration host factor alpha subunit [Ral...    56   5e-07 
ref|YP_756752.1|  integration host factor, alpha subunit [Ma...    56   5e-07 
ref|YP_609915.1|  DNA-binding protein HU form N [Pseudomonas...    56   5e-07 
ref|ZP_01297650.1|  hypothetical protein PaerP_01000616 [Pse...    56   5e-07 
ref|YP_546105.1|  integration host factor, alpha subunit [Me...    56   5e-07 
ref|YP_385996.1|  Histone-like DNA-binding protein [Geobacte...    56   5e-07 
ref|NP_968521.1|  integration host factor, alpha subunit [Bd...    56   5e-07 
sp|Q45722|DBH_BORTU  DNA-binding protein HBbu >gi|1280607|gb...    56   5e-07 
ref|NP_787244.1|  DNA-binding protein HU [Tropheryma whipple...    56   5e-07 
ref|ZP_00949485.1|  DNA-binding protein HU [Croceibacter atl...    56   5e-07 
ref|ZP_00419395.1|  Histone-like bacterial DNA-binding prote...    56   5e-07 
ref|YP_001021075.1|  integration host factor alpha-subunit [...    56   5e-07 
gb|EAK46972.1|  unknown [environmental sequence]                   56   7e-07 
gb|EAK11275.1|  unknown [environmental sequence]                   56   7e-07 
gb|EAJ26847.1|  unknown [environmental sequence]                   56   7e-07 
gb|EAD61198.1|  unknown [environmental sequence]                   56   7e-07 
gb|EAD50392.1|  unknown [environmental sequence]                   56   7e-07 
gb|EAC92591.1|  unknown [environmental sequence]                   56   7e-07 
gb|EAB56696.1|  unknown [environmental sequence]                   56   7e-07 
gb|EAB40033.1|  unknown [environmental sequence]                   56   7e-07 
ref|ZP_01494625.1|  integration host factor, alpha subunit [...    56   7e-07 
ref|YP_554348.1|  DNA-binding protein HU-alpha [Burkholderia...    56   7e-07 
gb|AAC73107.1|  histone-like protein HBbu [Borrelia burgdorf...    56   7e-07 
ref|NP_795196.1|  DNA-binding protein HU family [Pseudomonas...    56   7e-07 
gb|AAC73070.1|  histone-like protein HBbu [Borrelia burgdorf...    56   7e-07 
ref|YP_238092.1|  Histone-like bacterial DNA-binding protein...    56   7e-07 
ref|NP_791096.1|  DNA-binding protein HU family [Pseudomonas...    56   7e-07 
ref|NP_811742.1|  DNA-binding protein HU-beta [Bacteroides t...    56   7e-07 
ref|NP_950494.1|  bacterial nucleoid DNA-binding protein [On...    56   7e-07 
ref|NP_660480.1|  integration host factor alpha-subunit [Buc...    56   7e-07 
sp|Q45352|DBH_BORPR  DNA-binding protein HBbu >gi|1280569|gb...    56   7e-07 
ref|ZP_01114731.1|  probable DNA-binding protein [Reinekea s...    56   7e-07 
ref|ZP_00420605.1|  Histone-like bacterial DNA-binding prote...    56   7e-07 
ref|ZP_00143422.1|  DNA-binding protein HU [Fusobacterium nu...    56   7e-07 
gb|EAF13116.1|  unknown [environmental sequence]                   55   9e-07 
ref|ZP_01640644.1|  histone-like DNA-binding protein [Pseudo...    55   9e-07 
ref|ZP_01421796.1|  Histone-like bacterial DNA-binding prote...    55   9e-07 
gb|AAR84227.1|  integration host factor alpha subunit [Panto...    55   9e-07 
ref|YP_551729.1|  histone-like DNA-binding protein [Polaromo...    55   9e-07 
ref|YP_474405.1|  DNA-binding protein HU [Synechococcus sp. ...    55   9e-07 
ref|YP_190564.1|  Integration host factor alpha-subunit [Glu...    55   9e-07 
ref|NP_901024.1|  integration host factor alpha subunit [Chr...    55   9e-07 
ref|NP_771565.1|  probable DNA-binding protein HU [Bradyrhiz...    55   9e-07 
ref|ZP_01146024.1|  Histone-like bacterial DNA-binding prote...    55   9e-07 
ref|ZP_01120313.1|  DNA-binding protein HU [Robiginitalea bi...    55   9e-07 
ref|ZP_01051348.1|  probable DNA-binding protein HU [Cellulo...    55   9e-07 
ref|ZP_01049919.1|  DNA-binding protein HU [Cellulophaga sp....    55   9e-07 
ref|ZP_00997063.1|  DNA-binding protein HU [Janibacter sp. H...    55   9e-07 
gb|EAK75720.1|  unknown [environmental sequence]                   55   1e-06 
gb|EAJ59295.1|  unknown [environmental sequence]                   55   1e-06 
gb|EAJ01715.1|  unknown [environmental sequence]                   55   1e-06 
gb|EAI56968.1|  unknown [environmental sequence]                   55   1e-06 
gb|EAC81869.1|  unknown [environmental sequence]                   55   1e-06 
gb|EAF33127.1|  unknown [environmental sequence]                   55   1e-06 
gb|EAE82779.1|  unknown [environmental sequence]                   55   1e-06 
ref|ZP_01500133.1|  histone-like DNA-binding protein [Burkho...    55   1e-06 
ref|ZP_01418072.1|  Histone-like bacterial DNA-binding prote...    55   1e-06 
ref|YP_548393.1|  histone-like DNA-binding protein [Polaromo...    55   1e-06 
gb|AAC73105.1|  histone-like protein HBbu [Borrelia burgdorf...    55   1e-06 
gb|AAC73085.1|  histone-like protein HBbu [Borrelia burgdorf...    55   1e-06 
ref|YP_385997.1|  Histone-like DNA-binding protein [Geobacte...    55   1e-06 
ref|YP_162857.1|  integration host factor alpha-subunit [Zym...    55   1e-06 
ref|YP_420355.1|  Bacterial nucleoid DNA-binding protein [Ma...    55   1e-06 
ref|YP_420286.1|  Bacterial nucleoid DNA-binding protein [Ma...    55   1e-06 
dbj|BAA11644.1|  HupB, beta-subunit of HU [Escherichia coli ...    55   1e-06 
sp|Q9RNZ5|IHFA_ZYMMO  Integration host factor subunit alpha ...    55   1e-06 
ref|YP_866028.1|  histone family protein DNA-binding protein...    55   1e-06 
ref|NP_747414.1|  DNA-binding protein HU-alpha [Pseudomonas ...    55   1e-06 
gb|EAK12549.1|  unknown [environmental sequence]                   55   2e-06 
gb|EAI90160.1|  unknown [environmental sequence]                   55   2e-06 
gb|EAI87964.1|  unknown [environmental sequence]                   55   2e-06 
gb|EAH34996.1|  unknown [environmental sequence]                   55   2e-06 
gb|EAD67110.1|  unknown [environmental sequence]                   55   2e-06 
ref|YP_932589.1|  integration host factor alpha-subunit [Azo...    55   2e-06 
ref|ZP_01519786.1|  integration host factor, alpha subunit [...    55   2e-06 
ref|ZP_01306426.1|  Histone-like DNA-binding protein [Oceano...    55   2e-06 
ref|YP_393020.1|  Histone-like DNA-binding protein [Thiomicr...    55   2e-06 
ref|YP_477048.1|  DNA-binding protein HU [Synechococcus sp. ...    55   2e-06 
gb|AAC73090.1|  histone-like protein HBbu [Borrelia burgdorf...    55   2e-06 
gb|AAC73092.1|  histone-like protein HBbu [Borrelia burgdorf...    55   2e-06 
gb|AAW83376.1|  DNA-binding protein HU [Campylobacter lari] ...    55   2e-06 
ref|NP_421134.1|  DNA-binding protein HU [Caulobacter cresce...    55   2e-06 
ref|YP_157481.1|  integration host factor alpha subunit [Azo...    55   2e-06 
ref|YP_709675.1|  hbbU protein [Borrelia afzelii PKo] >gi|39...    55   2e-06 
sp|Q44625|DBH_BORAD  DNA-binding protein HBbu >gi|1280589|gb...    55   2e-06 
ref|NP_212366.1|  hbbU protein [Borrelia burgdorferi B31] >g...    55   2e-06 
ref|NP_252629.1|  probable DNA binding protein [Pseudomonas ...    55   2e-06 
gb|EAI24957.1|  unknown [environmental sequence]                   54   2e-06 
gb|EAI04858.1|  unknown [environmental sequence]                   54   2e-06 
gb|EAB54163.1|  unknown [environmental sequence] >gi|4404332...    54   2e-06 
gb|EAC74836.1|  unknown [environmental sequence]                   54   2e-06 
gb|EAC54701.1|  unknown [environmental sequence]                   54   2e-06 
gb|EAB95352.1|  unknown [environmental sequence]                   54   2e-06 
gb|EAF39424.1|  unknown [environmental sequence]                   54   2e-06 
gb|EAE76549.1|  unknown [environmental sequence]                   54   2e-06 
ref|ZP_01664182.1|  nucleoid DNA-binding protein-like [Ralst...    54   2e-06 
ref|ZP_01243665.1|  Histone-like bacterial DNA-binding prote...    54   2e-06 
gb|AAC73094.1|  histone-like protein HBbu [Borrelia afzelii]       54   2e-06 
ref|YP_295495.1|  integration host factor alpha subunit [Ral...    54   2e-06 
gb|AAW83347.1|  DNA-binding protein HU [Campylobacter coli] ...    54   2e-06 
gb|AAW83356.1|  DNA-binding protein HU [Campylobacter coli]        54   2e-06 
gb|AAW83351.1|  DNA-binding protein HU [Campylobacter coli]        54   2e-06 
gb|AAW83368.1|  DNA-binding protein HU [Campylobacter lari] ...    54   2e-06 
ref|NP_519704.1|  integration host factor alpha subunit [Ral...    54   2e-06 
ref|ZP_00945328.1|  Integration host factor alpha-subunit [R...    54   2e-06 
ref|ZP_00510067.1|  Histone-like bacterial DNA-binding prote...    54   2e-06 
ref|ZP_00370923.1|  DNA-binding protein HU [Campylobacter co...    54   2e-06 
ref|YP_583321.1|  integration host factor, alpha subunit [Ra...    54   2e-06 
gb|EAJ68174.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAD23485.1|  unknown [environmental sequence] >gi|4439341...    54   3e-06 
gb|EAI93358.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAI61155.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAI31466.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAH50209.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAH41732.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAD18785.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAE96929.1|  unknown [environmental sequence] >gi|4391931...    54   3e-06 
gb|EAC65500.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAB47043.1|  unknown [environmental sequence]                   54   3e-06 
ref|YP_892021.1|  DNA-binding protein HU [Campylobacter fetu...    54   3e-06 
ref|YP_610852.1|  DNA-binding protein HU-alpha [Pseudomonas ...    54   3e-06 
ref|ZP_01272564.1|  Histone-like bacterial DNA-binding prote...    54   3e-06 
gb|ABD62051.1|  Hbb [Borrelia andersonii]                          54   3e-06 
gb|ABD62053.1|  Hbb [Borrelia californiensis] >gi|89145730|g...    54   3e-06 
ref|YP_025620.1|  single-stranded binding protein [Pseudomon...    54   3e-06 
gb|AAC73071.1|  histone-like protein HBbu [Borrelia burgdorf...    54   3e-06 
ref|YP_460706.1|  DNA-binding protein HU [Syntrophus aciditr...    54   3e-06 
ref|NP_904465.1|  DNA-binding protein HU [Porphyromonas ging...    54   3e-06 
ref|NP_860324.1|  Histone-like DNA-binding protein HU (HupB)...    54   3e-06 
ref|NP_603715.1|  DNA-binding protein HU [Fusobacterium nucl...    54   3e-06 
ref|YP_101700.1|  DNA binding protein HU family [Bacteroides...    54   3e-06 
ref|NP_777671.1|  DNA-binding protein HU [Buchnera aphidicol...    54   3e-06 
ref|YP_961014.1|  histone family protein DNA-binding protein...    54   3e-06 
ref|ZP_00370158.1|  hup protein [Campylobacter upsaliensis R...    54   3e-06 
ref|YP_645042.1|  histone-like DNA-binding protein [Rubrobac...    54   3e-06 
gb|EAJ80772.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAJ62239.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAJ30643.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAJ14736.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAI05805.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAD38454.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAG66421.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAF97566.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAF92885.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAC36038.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAB86827.1|  unknown [environmental sequence]                   54   3e-06 
gb|EAB10841.1|  unknown [environmental sequence]                   54   3e-06 
sp|Q1RHD4|DBH_RICBR  DNA-binding protein HU                        54   3e-06 
ref|ZP_01573449.1|  integration host factor, alpha subunit [...    54   3e-06 
ref|YP_903857.1|  histone family protein DNA-binding protein...    54   3e-06 
ref|YP_761164.1|  DNA-binding protein HU [Hyphomonas neptuni...    54   3e-06 
ref|YP_986631.1|  histone family protein DNA-binding protein...    54   3e-06 
gb|ABD36054.1|  Hbb [Borrelia lusitaniae] >gi|87248003|gb|AB...    54   3e-06 
ref|YP_538319.1|  DNA-binding protein HU [Rickettsia bellii ...    54   3e-06 
ref|YP_486264.1|  integration host factor, alpha subunit [Rh...    54   3e-06 
gb|AAC36331.1|  histone-like protein; HU [Caulobacter cresce...    54   3e-06 
gb|AAC73087.1|  histone-like protein HBbu [Borrelia burgdorf...    54   3e-06 
ref|YP_443105.1|  integration host factor, alpha subunit [Bu...    54   3e-06 
ref|YP_333297.1|  integration host factor alpha subunit [Bur...    54   3e-06 
gb|AAW83348.1|  DNA-binding protein HU [Campylobacter jejuni...    54   3e-06 
ref|YP_102781.1|  integration host factor alpha subunit [Bur...    54   3e-06 
ref|YP_108538.1|  integration host factor alpha subunit [Bur...    54   3e-06 
ref|NP_948085.1|  integration host factor alpha subunit [Rho...    54   3e-06 
ref|NP_282065.1|  DNA-binding protein HU homolog [Campylobac...    54   3e-06 
ref|NP_420766.1|  DNA-binding protein HU [Caulobacter cresce...    54   3e-06 
ref|NP_219772.1|  Integration Host Factor Alpha [Chlamydia t...    54   3e-06 
ref|ZP_01062160.1|  DNA-binding protein HU [Flavobacterium s...    54   3e-06 
ref|ZP_01016132.1|  integration host factor alpha subunit [P...    54   3e-06 
ref|ZP_00893607.1|  hypothetical protein Bpse110_02004183 [B...    54   3e-06 
ref|YP_532545.1|  integration host factor, alpha subunit [Rh...    54   3e-06 
ref|YP_569817.1|  integration host factor, alpha subunit [Rh...    54   3e-06 
ref|YP_773257.1|  integration host factor, alpha subunit [Bu...    54   3e-06 
ref|ZP_01321327.1|  hypothetical protein BpseP_03004908 [Bur...    54   3e-06 
ref|ZP_00488536.1|  COG0776: Bacterial nucleoid DNA-binding ...    54   3e-06 
ref|ZP_01210303.1|  hypothetical protein Bpse17_02004649 [Bu...    54   3e-06 
ref|ZP_00440142.1|  COG0776: Bacterial nucleoid DNA-binding ...    54   3e-06 
ref|YP_368861.1|  integration host factor alpha subunit [Bur...    54   3e-06 
ref|ZP_00424881.1|  Integration host factor, alpha subunit [...    54   3e-06 
ref|ZP_00982413.1|  COG0776: Bacterial nucleoid DNA-binding ...    54   3e-06 
gb|EAJ91266.1|  unknown [environmental sequence]                   53   4e-06 
gb|EAF04620.1|  unknown [environmental sequence] >gi|4450281...    53   4e-06 
gb|EAI60895.1|  unknown [environmental sequence]                   53   4e-06 
gb|EAI52719.1|  unknown [environmental sequence]                   53   4e-06 
gb|EAH86669.1|  unknown [environmental sequence]                   53   4e-06 
gb|EAC84638.1|  unknown [environmental sequence]                   53   4e-06 
gb|EAF07870.1|  unknown [environmental sequence]                   53   4e-06 
gb|EAB38229.1|  unknown [environmental sequence]                   53   4e-06 
gb|EAB30717.1|  unknown [environmental sequence]                   53   4e-06 
gb|EAE53681.1|  unknown [environmental sequence]                   53   4e-06 
gb|EAE16244.1|  unknown [environmental sequence]                   53   4e-06 
ref|ZP_01419519.1|  Histone-like bacterial DNA-binding prote...    53   4e-06 
gb|ABD62056.1|  Hbb [Borrelia genomosp. 1] >gi|89145736|gb|A...    53   4e-06 
ref|YP_318021.1|  integration host factor, alpha subunit [Ni...    53   4e-06 
gb|AAW83338.1|  DNA-binding protein HU [Campylobacter upsali...    53   4e-06 
gb|AAW83401.1|  DNA-binding protein HU [Campylobacter upsali...    53   4e-06 
ref|NP_841025.1|  integration host factor alpha subunit [Nit...    53   4e-06 
sp|Q45231|DBH_BORJA  DNA-binding protein HBbu >gi|1280597|gb...    53   4e-06 
ref|ZP_01117400.1|  DNA-binding protein HU [Polaribacter irg...    53   4e-06 
ref|ZP_01053549.1|  DNA-binding protein HU [Tenacibaculum sp...    53   4e-06 
ref|ZP_01047246.1|  integration host factor, alpha subunit [...    53   4e-06 
ref|YP_748507.1|  integration host factor, alpha subunit [Ni...    53   4e-06 
gb|EAI08993.1|  unknown [environmental sequence]                   53   6e-06 
gb|EAF62316.1|  unknown [environmental sequence]                   53   6e-06 
ref|ZP_01543070.1|  histone-like DNA-binding protein [Shewan...    53   6e-06 
ref|ZP_01516045.1|  histone-like DNA-binding protein [Chloro...    53   6e-06 
ref|YP_974071.1|  histone family protein DNA-binding protein...    53   6e-06 
dbj|GAA02451.1|  unnamed protein product [Pelotomaculum ther...    53   6e-06 
ref|ZP_01300785.1|  hypothetical protein Rgryl_01000105 [Ric...    53   6e-06 
ref|YP_477138.1|  DNA-binding protein HU [Synechococcus sp. ...    53   6e-06 
ref|YP_056371.1|  DNA-binding protein HU [Propionibacterium ...    53   6e-06 
ref|YP_025670.1|  single-stranded binding protein [Pseudomon...    53   6e-06 
ref|YP_285871.1|  integration host factor alpha subunit [Dec...    53   6e-06 
gb|AAW83332.1|  DNA-binding protein HU [Campylobacter coli]        53   6e-06 
gb|AAW83460.1|  DNA-binding protein HU [Campylobacter upsali...    53   6e-06 
ref|YP_234178.1|  Histone-like bacterial DNA-binding protein...    53   6e-06 
ref|NP_420183.1|  integration host factor alpha-subunit [Cau...    53   6e-06 
gb|AAZ83607.1|  Hbb [Borrelia spielmanii] >gi|74476805|gb|AB...    53   6e-06 
ref|YP_008167.1|  putative integration host factor [Candidat...    53   6e-06 
ref|YP_781744.1|  integration host factor, alpha subunit [Rh...    53   6e-06 
gb|EAK47893.1|  unknown [environmental sequence]                   52   8e-06 
gb|EAK38429.1|  unknown [environmental sequence]                   52   8e-06 
gb|EAJ68178.1|  unknown [environmental sequence]                   52   8e-06 
gb|EAG33853.1|  unknown [environmental sequence]                   52   8e-06 
gb|EAC30241.1|  unknown [environmental sequence]                   52   8e-06 
gb|EAB94678.1|  unknown [environmental sequence]                   52   8e-06 
gb|EAB67469.1|  unknown [environmental sequence]                   52   8e-06 
gb|EAB33457.1|  unknown [environmental sequence]                   52   8e-06 
gb|EAE67065.1|  unknown [environmental sequence]                   52   8e-06 
gb|EAE48995.1|  unknown [environmental sequence]                   52   8e-06 
ref|ZP_01692101.1|  DNA-binding protein HU [Microscilla mari...    52   8e-06 
ref|ZP_01510699.1|  integration host factor, alpha subunit [...    52   8e-06 
ref|ZP_01502006.1|  integration host factor, alpha subunit [...    52   8e-06 
ref|YP_863580.1|  histone-like bacterial DNA-binding protein...    52   8e-06 
ref|ZP_01422792.1|  Histone-like bacterial DNA-binding prote...    52   8e-06 
ref|YP_559628.1|  Integration host factor, alpha subunit [Bu...    52   8e-06 
ref|NP_826304.1|  DNA-binding protein Hu 1 [Streptomyces ave...    52   8e-06 
ref|YP_577475.1|  histone-like DNA-binding protein [Nitrobac...    52   8e-06 
ref|YP_576868.1|  integration host factor, alpha subunit [Ni...    52   8e-06 
ref|YP_411193.1|  integration host factor, alpha subunit [Ni...    52   8e-06 
ref|YP_284547.1|  Integration host factor, alpha subunit [De...    52   8e-06 
ref|NP_829247.1|  integration host factor beta-subunit, puta...    52   8e-06 
ref|YP_072681.1|  hbbU protein [Borrelia garinii PBi] >gi|39...    52   8e-06 
ref|NP_771659.1|  integration host factor alpha subunit [Bra...    52   8e-06 
ref|ZP_00859822.1|  Integration host factor, alpha subunit [...    52   8e-06 
ref|YP_570018.1|  histone-like DNA-binding protein [Rhodopse...    52   8e-06 
ref|YP_927488.1|  DNA-binding protein, HU family [Shewanella...    52   8e-06 
gb|EAJ98206.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAI56026.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAG60690.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAC97258.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAG30363.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAF71199.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAE57841.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAE51079.1|  unknown [environmental sequence]                   52   1e-05 
ref|ZP_01528503.1|  histone-like DNA-binding protein [Pseudo...    52   1e-05 
ref|YP_486184.1|  Histone-like DNA-binding protein [Rhodopse...    52   1e-05 
gb|AAC73082.1|  histone-like protein HBbu [Borrelia garinii]       52   1e-05 
gb|AAW83355.1|  DNA-binding protein HU [Campylobacter jejuni]      52   1e-05 
ref|NP_810412.1|  DNA-binding protein HU [Bacteroides thetai...    52   1e-05 
ref|YP_421442.1|  Bacterial nucleoid DNA-binding protein [Ma...    52   1e-05 
ref|NP_948294.1|  possible DNA-binding protein hu-alpha (NS2...    52   1e-05 
ref|NP_224616.1|  Integration Host Factor Alpha [Chlamydophi...    52   1e-05 
ref|NP_207628.1|  histone-like DNA-binding protein HU (hup) ...    52   1e-05 
ref|ZP_00913162.1|  Histone-like bacterial DNA-binding prote...    52   1e-05 
gb|EAJ97393.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAJ89661.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAJ64606.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAJ26588.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAI29687.1|  unknown [environmental sequence] >gi|4442824...    52   1e-05 
gb|EAI66155.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAC90066.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAG20027.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAC47082.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAF24483.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAF15511.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAB00606.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAA93257.1|  unknown [environmental sequence]                   52   1e-05 
gb|EAE01588.1|  unknown [environmental sequence]                   52   1e-05 
ref|ZP_01459756.1|  non-specific DNA-binding protein [Stigma...    52   1e-05 
ref|YP_627562.1|  DNA-binding protein HU [Helicobacter pylor...    52   1e-05 
ref|ZP_01254930.1|  DNA-binding protein HU [Psychroflexus to...    52   1e-05 
ref|ZP_01258126.1|  Bacterial DNA-binding protein [Psychrofl...    52   1e-05 
gb|AAC73078.1|  histone-like protein HBbu [Borrelia garinii]...    52   1e-05 
ref|NP_972313.1|  DNA-binding protein, HU family [Treponema ...    52   1e-05 
ref|NP_905442.1|  DNA-binding protein HU [Porphyromonas ging...    52   1e-05 
ref|YP_421544.1|  Bacterial nucleoid DNA-binding protein [Ma...    52   1e-05 
ref|YP_781435.1|  histone family protein DNA-binding protein...    52   1e-05 
gb|EAK73465.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAK06901.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAJ54207.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAJ09883.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAJ04225.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAG71677.1|  unknown [environmental sequence] >gi|4438532...    51   2e-05 
gb|EAG50111.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAG78705.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAC52666.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAF91046.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAB37861.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAE79847.1|  unknown [environmental sequence]                   51   2e-05 
ref|ZP_01425034.1|  histone-like DNA-binding protein [Herpet...    51   2e-05 
ref|ZP_01301863.1|  histone-like DNA-binding protein [Sphing...    51   2e-05 
ref|ZP_01258172.1|  putative histone-like DNA-binding protei...    51   2e-05 
ref|YP_314771.1|  integration host factor alpha subunit [Thi...    51   2e-05 
gb|AAP13078.1|  DNA-binding protein HU [Helicobacter pylori]       51   2e-05 
ref|YP_318504.1|  Histone-like DNA-binding protein [Nitrobac...    51   2e-05 
ref|NP_223492.1|  DNA-BINDING PROTEIN HU [Helicobacter pylor...    51   2e-05 
ref|YP_617671.1|  histone-like DNA-binding protein [Sphingop...    51   2e-05 
gb|EAK64578.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAK01805.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAJ76873.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAG45554.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAC19847.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAB83974.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAB45602.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAB44626.1|  unknown [environmental sequence]                   51   2e-05 
gb|EAE76109.1|  unknown [environmental sequence]                   51   2e-05 
ref|ZP_01418731.1|  integration host factor, alpha subunit [...    51   2e-05 
ref|YP_424299.1|  DNA-binding protein, HU [Mycoplasma capric...    51   2e-05 
ref|XP_680463.1|  hypothetical protein [Plasmodium berghei s...    51   2e-05 
ref|ZP_01047413.1|  Histone-like DNA-binding protein [Nitrob...    51   2e-05 
ref|ZP_00208527.1|  COG0776: Bacterial nucleoid DNA-binding ...    51   2e-05 
gb|EAH42916.1|  unknown [environmental sequence] >gi|4458342...    50   3e-05 
gb|EAI88330.1|  unknown [environmental sequence]                   50   3e-05 
gb|EAG63912.1|  unknown [environmental sequence]                   50   3e-05 
gb|EAC46106.1|  unknown [environmental sequence]                   50   3e-05 
gb|EAC27285.1|  unknown [environmental sequence]                   50   3e-05 
gb|EAF04614.1|  unknown [environmental sequence]                   50   3e-05 
ref|ZP_01359379.1|  Histone-like bacterial DNA-binding prote...    50   3e-05 
ref|YP_258192.1|  DNA-binding protein HU, nu subunit [Pseudo...    50   3e-05 
ref|YP_115338.1|  prophage MuMc02, DNA-binding protein HU [M...    50   3e-05 
ref|ZP_00997100.1|  Histone-like bacterial DNA-binding prote...    50   3e-05 
ref|YP_680263.1|  DNA-binding protein HU [Cytophaga hutchins...    50   3e-05 
ref|ZP_00766871.1|  Histone-like bacterial DNA-binding prote...    50   3e-05 
gb|EAK71832.1|  unknown [environmental sequence]                   50   4e-05 
gb|EAH35207.1|  unknown [environmental sequence]                   50   4e-05 
gb|EAH14218.1|  unknown [environmental sequence]                   50   4e-05 
gb|EAD23756.1|  unknown [environmental sequence]                   50   4e-05 
gb|EAF21444.1|  unknown [environmental sequence]                   50   4e-05 
gb|EAF17464.1|  unknown [environmental sequence]                   50   4e-05 
gb|EAB58686.1|  unknown [environmental sequence]                   50   4e-05 
gb|EAE90963.1|  unknown [environmental sequence]                   50   4e-05 
gb|EAB04689.1|  unknown [environmental sequence]                   50   4e-05 
ref|YP_209715.1|  putative HU-like DNA binding protein [Bact...    50   4e-05 
ref|ZP_00952275.1|  Histone-like DNA-binding protein [Oceani...    50   4e-05 
ref|YP_532268.1|  histone-like DNA-binding protein [Rhodopse...    50   4e-05 
gb|EAB64247.1|  unknown [environmental sequence]                   50   5e-05 
ref|ZP_01532727.1|  histone-like DNA-binding protein [Roseif...    50   5e-05 
ref|YP_461799.1|  DNA-binding protein HU [Syntrophus aciditr...    50   5e-05 
ref|YP_346716.1|  Histone-like DNA-binding protein [Pseudomo...    50   5e-05 
ref|YP_098837.1|  DNA-binding protein HU [Bacteroides fragil...    50   5e-05 
ref|NP_907221.1|  hypothetical protein WS1019 [Wolinella suc...    50   5e-05 
ref|ZP_00380659.1|  COG0776: Bacterial nucleoid DNA-binding ...    50   5e-05 
ref|ZP_00619268.1|  Histone-like bacterial DNA-binding prote...    50   5e-05 
gb|EAB64383.1|  unknown [environmental sequence] >gi|4303571...    49   6e-05 
gb|EAH34594.1|  unknown [environmental sequence]                   49   6e-05 
gb|EAG67885.1|  unknown [environmental sequence]                   49   6e-05 
gb|EAF21284.1|  unknown [environmental sequence]                   49   6e-05 
gb|EAB38138.1|  unknown [environmental sequence]                   49   6e-05 
gb|EAB36311.1|  unknown [environmental sequence]                   49   6e-05 
gb|EAA82811.1|  unknown [environmental sequence]                   49   6e-05 
gb|EAD84136.1|  unknown [environmental sequence]                   49   6e-05 
ref|YP_629691.1|  DNA-binding protein HU [Myxococcus xanthus...    49   6e-05 
gb|AAD03319.1|  histone-like protein HLm [Listeria monocytog...    49   6e-05 
ref|YP_087160.1|  DNA binding protein HU [Bacteroides fragil...    49   6e-05 
ref|NP_285388.1|  DNA-binding protein HB [Deinococcus radiod...    49   6e-05 
sp|Q9RZ89|DBH_DEIRA  DNA-binding protein HU                        49   6e-05 
ref|NP_627174.1|  DNA-binding protein Hu (hs1) [Streptomyces...    49   6e-05 
ref|YP_909415.1|  DNA-binding protein HB1 [Bifidobacterium a...    49   6e-05 
ref|ZP_00120732.1|  COG0776: Bacterial nucleoid DNA-binding ...    49   6e-05 
gb|EAB02978.1|  unknown [environmental sequence] >gi|4288300...    49   8e-05 
gb|EAC46146.1|  unknown [environmental sequence] >gi|4397259...    49   8e-05 
gb|EAJ90314.1|  unknown [environmental sequence]                   49   8e-05 
gb|EAI31301.1|  unknown [environmental sequence]                   49   8e-05 
gb|EAH93968.1|  unknown [environmental sequence]                   49   8e-05 
gb|EAE97850.1|  unknown [environmental sequence] >gi|4377816...    49   8e-05 
gb|EAC99318.1|  unknown [environmental sequence]                   49   8e-05 
gb|EAB82173.1|  unknown [environmental sequence]                   49   8e-05 
gb|EAB74517.1|  unknown [environmental sequence]                   49   8e-05 
gb|EAB50937.1|  unknown [environmental sequence]                   49   8e-05 
gb|EAE43802.1|  unknown [environmental sequence]                   49   8e-05 
ref|YP_759440.1|  DNA-binding protein HU [Hyphomonas neptuni...    49   8e-05 
ref|XP_001351921.1|  hypothetical protein, conserved [Plasmo...    49   8e-05 
gb|AAC98965.1|  unknown [Mycoplasma hyopneumoniae]                 49   8e-05 
ref|YP_456675.1|  DNA-binding protein HU [Aster yellows witc...    49   8e-05 
ref|YP_161979.1|  HU DNA-binding protein [Zymomonas mobilis ...    49   8e-05 
ref|YP_053671.1|  predicted histone-like DNA-binding protein...    49   8e-05 
ref|NP_903539.1|  probable DNA-binding protein hu-beta [Chro...    49   8e-05 
ref|YP_211600.1|  putative histone-like DNA-binding protein ...    49   8e-05 
ref|NP_906737.1|  PUTATIVE DNA-BINDING PROTEIN II (HB) [Woli...    49   8e-05 
gb|EAK49601.1|  unknown [environmental sequence]                   49   1e-04 
gb|EAJ92670.1|  unknown [environmental sequence]                   49   1e-04 
gb|EAH97774.1|  unknown [environmental sequence] >gi|4444363...    49   1e-04 
gb|EAJ02438.1|  unknown [environmental sequence]                   49   1e-04 
gb|EAI02133.1|  unknown [environmental sequence]                   49   1e-04 
gb|EAD14509.1|  unknown [environmental sequence]                   49   1e-04 
gb|EAC99183.1|  unknown [environmental sequence]                   49   1e-04 
gb|EAG45494.1|  unknown [environmental sequence]                   49   1e-04 
gb|EAC79626.1|  unknown [environmental sequence]                   49   1e-04 
gb|EAC77703.1|  unknown [environmental sequence]                   49   1e-04 
gb|EAA91860.1|  unknown [environmental sequence]                   49   1e-04 
emb|CAJ74993.1|  strongly similar to DNA binding protein HU ...    49   1e-04 
ref|YP_361687.1|  histone-like family DNA-binding protein [X...    49   1e-04 
ref|NP_214026.1|  DNA binding protein HU [Aquifex aeolicus V...    49   1e-04 
ref|YP_796459.1|  nucleoid DNA-binding protein [Lactococcus ...    49   1e-04 
ref|ZP_00050720.1|  COG0776: Bacterial nucleoid DNA-binding ...    49   1e-04 
gb|EAI00661.1|  unknown [environmental sequence] >gi|4427037...    48   1e-04 
gb|EAI63279.1|  unknown [environmental sequence]                   48   1e-04 
gb|EAC83947.1|  unknown [environmental sequence]                   48   1e-04 
gb|EAF52867.1|  unknown [environmental sequence]                   48   1e-04 
gb|EAB81800.1|  unknown [environmental sequence]                   48   1e-04 
gb|EAB52606.1|  unknown [environmental sequence]                   48   1e-04 
gb|EAB27528.1|  unknown [environmental sequence]                   48   1e-04 
ref|ZP_01494411.1|  histone-like DNA-binding protein [Polynu...    48   1e-04 
ref|YP_320368.1|  Histone-like DNA-binding protein [Anabaena...    48   1e-04 
ref|YP_053910.1|  predicted histone-like DNA-binding protein...    48   1e-04 
gb|EAI02068.1|  unknown [environmental sequence]                   48   2e-04 
gb|EAH69043.1|  unknown [environmental sequence]                   48   2e-04 
gb|EAF04062.1|  unknown [environmental sequence]                   48   2e-04 
gb|EAE97362.1|  unknown [environmental sequence]                   48   2e-04 
gb|EAB35044.1|  unknown [environmental sequence]                   48   2e-04 
gb|EAB31865.1|  unknown [environmental sequence]                   48   2e-04 
ref|ZP_01609838.1|  histone family protein DNA-binding prote...    48   2e-04 
ref|YP_115591.1|  hypothetical protein mhp077 [Mycoplasma hy...    48   2e-04 
ref|NP_950295.1|  bacterial nucleoid DNA-binding protein [On...    48   2e-04 
gb|EAH00949.1|  unknown [environmental sequence]                   47   2e-04 
gb|EAG19454.1|  unknown [environmental sequence]                   47   2e-04 
gb|EAG00347.1|  unknown [environmental sequence]                   47   2e-04 
gb|EAC35607.1|  unknown [environmental sequence]                   47   2e-04 
gb|EAF58627.1|  unknown [environmental sequence]                   47   2e-04 
gb|EAB71228.1|  unknown [environmental sequence]                   47   2e-04 
gb|EAE89162.1|  unknown [environmental sequence]                   47   2e-04 
gb|EAE74430.1|  unknown [environmental sequence]                   47   2e-04 
gb|EAD97109.1|  unknown [environmental sequence]                   47   2e-04 
gb|AAK91083.1|  AGR_pTi_222p [Agrobacterium tumefaciens str....    47   2e-04 
ref|YP_456406.1|  DNA-binding protein HU [Aster yellows witc...    47   2e-04 
ref|NP_809825.1|  DNA-binding protein HU [Bacteroides thetai...    47   2e-04 
ref|NP_053342.1|  hypothetical protein pTi-SAKURA_p104 [Agro...    47   2e-04 
dbj|BAB88690.1|  histone-like HU protein HBl [Bifidobacteriu...    47   2e-04 
gb|EAJ32187.1|  unknown [environmental sequence]                   47   3e-04 
gb|EAJ29854.1|  unknown [environmental sequence]                   47   3e-04 
gb|EAI09047.1|  unknown [environmental sequence]                   47   3e-04 
gb|EAG81209.1|  unknown [environmental sequence]                   47   3e-04 
gb|EAG10610.1|  unknown [environmental sequence]                   47   3e-04 
gb|EAB81682.1|  unknown [environmental sequence]                   47   3e-04 
gb|EAE40278.1|  unknown [environmental sequence]                   47   3e-04 
gb|EAA79677.1|  unknown [environmental sequence]                   47   3e-04 
ref|YP_759882.1|  putative integration host factor, alpha su...    47   3e-04 
ref|ZP_01265203.1|  Bacterial DNA-binding protein [Candidatu...    47   3e-04 
ref|YP_496496.1|  histone-like DNA-binding protein [Novosphi...    47   3e-04 
ref|YP_473789.1|  DNA-binding protein HU [Synechococcus sp. ...    47   3e-04 
ref|YP_456573.1|  DNA-binding protein HU [Aster yellows witc...    47   3e-04 
ref|YP_266445.1|  Bacterial DNA-binding protein [Candidatus ...    47   3e-04 
ref|NP_385330.1|  integration host factor alpha subunit [Sin...    47   3e-04 
ref|NP_108523.1|  integration host factor alpha subunit [Mes...    47   3e-04 
ref|NP_354199.1|  integration host factor alpha subunit [Agr...    47   3e-04 
ref|NP_531876.1|  integration host factor alpha subunit [Agr...    47   3e-04 
ref|YP_673708.1|  integration host factor, alpha subunit [Me...    47   3e-04 
gb|EAJ92812.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAI19327.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAH96611.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAG28556.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAC47749.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAF30345.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAB80957.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAB56844.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAE95029.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAB38483.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAB26465.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAA86276.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAA79709.1|  unknown [environmental sequence]                   47   4e-04 
gb|EAE13644.1|  unknown [environmental sequence]                   47   4e-04 
ref|YP_767244.1|  putative integration host factor alpha-sub...    47   4e-04 
ref|YP_756206.1|  histone family protein DNA-binding protein...    47   4e-04 
ref|YP_469063.1|  integration host factor alpha-subunit prot...    47   4e-04 
ref|YP_023153.1|  DNA-binding protein [Picrophilus torridus ...    47   4e-04 
ref|YP_012397.1|  DNA-binding protein HU [Desulfovibrio vulg...    47   4e-04 
ref|NP_325918.1|  DNA-BINDING PROTEIN HU [Mycoplasma pulmoni...    47   4e-04 
ref|ZP_00742453.1|  DNA-binding protein HU [Bacillus thuring...    47   4e-04 
gb|EAK55416.1|  unknown [environmental sequence]                   46   5e-04 
gb|EAJ63588.1|  unknown [environmental sequence]                   46   5e-04 
gb|EAJ53988.1|  unknown [environmental sequence]                   46   5e-04 
gb|EAI66035.1|  unknown [environmental sequence]                   46   5e-04 
gb|EAH47681.1|  unknown [environmental sequence]                   46   5e-04 
gb|EAG73553.1|  unknown [environmental sequence]                   46   5e-04 
gb|EAG44533.1|  unknown [environmental sequence]                   46   5e-04 
gb|EAF97378.1|  unknown [environmental sequence]                   46   5e-04 
gb|EAC39359.1|  unknown [environmental sequence]                   46   5e-04 
gb|EAC01676.1|  unknown [environmental sequence]                   46   5e-04 
gb|EAB59697.1|  unknown [environmental sequence] >gi|4361128...    46   5e-04 
gb|EAE19179.1|  unknown [environmental sequence]                   46   5e-04 
ref|YP_664959.1|  histon like DNA-binding protein HU [Helico...    46   5e-04 
ref|YP_456426.1|  DNA-binding protein HU [Aster yellows witc...    46   5e-04 
ref|NP_950815.1|  bacterial nucleoid DNA-binding protein [On...    46   5e-04 
ref|ZP_01017489.1|  DNA-binding protein HU [Parvularcula ber...    46   5e-04 
ref|ZP_00864342.1|  Histone-like bacterial DNA-binding prote...    46   5e-04 
ref|ZP_00682702.1|  Histone-like bacterial DNA-binding prote...    46   5e-04 
ref|ZP_00544701.1|  Histone-like bacterial DNA-binding prote...    46   5e-04 
gb|EAK57260.1|  unknown [environmental sequence]                   46   7e-04 
gb|EAK39321.1|  unknown [environmental sequence]                   46   7e-04 
gb|EAE20363.1|  unknown [environmental sequence] >gi|4400769...    46   7e-04 
gb|EAJ81640.1|  unknown [environmental sequence]                   46   7e-04 
gb|EAA83192.1|  unknown [environmental sequence] >gi|4286540...    46   7e-04 
gb|EAD26914.1|  unknown [environmental sequence]                   46   7e-04 
gb|EAG32431.1|  unknown [environmental sequence]                   46   7e-04 
gb|EAC29095.1|  unknown [environmental sequence]                   46   7e-04 
gb|EAF36503.1|  unknown [environmental sequence]                   46   7e-04 
gb|EAB81930.1|  unknown [environmental sequence]                   46   7e-04 
gb|EAF04320.1|  unknown [environmental sequence]                   46   7e-04 
gb|EAE03847.1|  unknown [environmental sequence]                   46   7e-04 
ref|ZP_01659770.1|  histone-like DNA-binding protein [Parvib...    46   7e-04 
gb|EAK35726.1|  unknown [environmental sequence]                   45   0.001 
gb|EAK16015.1|  unknown [environmental sequence]                   45   0.001 
gb|EAC55008.1|  unknown [environmental sequence] >gi|4336525...    45   0.001 
gb|EAJ00179.1|  unknown [environmental sequence]                   45   0.001 
gb|EAI98977.1|  unknown [environmental sequence]                   45   0.001 
gb|EAI45798.1|  unknown [environmental sequence]                   45   0.001 
gb|EAB19907.1|  unknown [environmental sequence] >gi|4431757...    45   0.001 
gb|EAI32959.1|  unknown [environmental sequence]                   45   0.001 
gb|EAF50374.1|  unknown [environmental sequence] >gi|4429532...    45   0.001 
gb|EAI25103.1|  unknown [environmental sequence]                   45   0.001 
gb|EAH83150.1|  unknown [environmental sequence]                   45   0.001 
gb|EAH19647.1|  unknown [environmental sequence]                   45   0.001 
gb|EAD51536.1|  unknown [environmental sequence]                   45   0.001 
gb|EAD47150.1|  unknown [environmental sequence]                   45   0.001 
gb|EAG91023.1|  unknown [environmental sequence]                   45   0.001 
gb|EAD35820.1|  unknown [environmental sequence]                   45   0.001 
gb|EAC32758.1|  unknown [environmental sequence]                   45   0.001 
gb|EAF57658.1|  unknown [environmental sequence]                   45   0.001 
gb|EAB82882.1|  unknown [environmental sequence]                   45   0.001 
gb|EAF26534.1|  unknown [environmental sequence]                   45   0.001 
ref|ZP_01633096.1|  hypothetical protein CdifQ_03004051 [Clo...    45   0.001 
gb|EAK46745.1|  unknown [environmental sequence]                   45   0.001 
gb|EAK35949.1|  unknown [environmental sequence]                   45   0.001 
gb|EAD67537.1|  unknown [environmental sequence]                   45   0.001 
gb|EAD52542.1|  unknown [environmental sequence]                   45   0.001 
gb|EAB93712.1|  unknown [environmental sequence] >gi|4361621...    45   0.001 
gb|EAD22302.1|  unknown [environmental sequence]                   45   0.001 
gb|EAG21605.1|  unknown [environmental sequence]                   45   0.001 
gb|EAC62719.1|  unknown [environmental sequence]                   45   0.001 
gb|EAF68677.1|  unknown [environmental sequence]                   45   0.001 
gb|EAC09420.1|  unknown [environmental sequence]                   45   0.001 
gb|EAF45508.1|  unknown [environmental sequence]                   45   0.001 
gb|EAC00157.1|  unknown [environmental sequence]                   45   0.001 
gb|EAF44200.1|  unknown [environmental sequence]                   45   0.001 
gb|EAF37661.1|  unknown [environmental sequence]                   45   0.001 
gb|EAB82739.1|  unknown [environmental sequence]                   45   0.001 
gb|EAB55120.1|  unknown [environmental sequence]                   45   0.001 
gb|EAB52893.1|  unknown [environmental sequence]                   45   0.001 
gb|EAE45194.1|  unknown [environmental sequence]                   45   0.001 
gb|EAA90208.1|  unknown [environmental sequence]                   45   0.001 
ref|YP_246783.1|  Integration host factor beta-subunit [Rick...    45   0.001 
ref|NP_697792.1|  integration host factor alpha subunit [Bru...    45   0.001 
ref|NP_540096.1|  integration host factor alpha subunit [Bru...    45   0.001 
gb|EAJ79198.1|  unknown [environmental sequence]                   45   0.002 
gb|EAH54943.1|  unknown [environmental sequence]                   45   0.002 
gb|EAF85032.1|  unknown [environmental sequence]                   45   0.002 
gb|EAC28793.1|  unknown [environmental sequence]                   45   0.002 
gb|EAC28541.1|  unknown [environmental sequence]                   45   0.002 
gb|EAB64897.1|  unknown [environmental sequence]                   45   0.002 
gb|EAE92674.1|  unknown [environmental sequence]                   45   0.002 
ref|YP_266237.1|  non-specific DNA-binding protein HBsu [Can...    45   0.002 
gb|EAJ26576.1|  unknown [environmental sequence]                   44   0.002 
gb|EAI99209.1|  unknown [environmental sequence]                   44   0.002 
gb|EAI56558.1|  unknown [environmental sequence]                   44   0.002 
gb|EAI31396.1|  unknown [environmental sequence]                   44   0.002 
gb|EAH66153.1|  unknown [environmental sequence]                   44   0.002 
gb|EAH35446.1|  unknown [environmental sequence]                   44   0.002 
gb|EAC84900.1|  unknown [environmental sequence]                   44   0.002 
gb|EAF94771.1|  unknown [environmental sequence]                   44   0.002 
gb|EAF80148.1|  unknown [environmental sequence]                   44   0.002 
gb|EAB40603.1|  unknown [environmental sequence]                   44   0.002 
gb|EAB34629.1|  unknown [environmental sequence]                   44   0.002 
gb|EAB20686.1|  unknown [environmental sequence]                   44   0.002 
gb|EAE19691.1|  unknown [environmental sequence]                   44   0.002 
ref|YP_949429.1|  DNA-binding protein HU [Arthrobacter aures...    44   0.002 
ref|YP_386621.1|  histone-like DNA-binding protein [Desulfov...    44   0.002 
ref|YP_257083.1|  hypothetical protein pSG2GP_12 [Sodalis gl...    44   0.002 
sp|O68451|DBHL_RICRI  DNA-binding protein HU-like >gi|294401...    44   0.002 
ref|YP_833391.1|  histone family protein DNA-binding protein...    44   0.002 
ref|ZP_00153736.1|  COG0776: Bacterial nucleoid DNA-binding ...    44   0.002 
gb|EAJ73551.1|  unknown [environmental sequence]                   44   0.003 
gb|EAI28698.1|  unknown [environmental sequence]                   44   0.003 
gb|EAI08392.1|  unknown [environmental sequence]                   44   0.003 
gb|EAH54474.1|  unknown [environmental sequence]                   44   0.003 
gb|EAH52947.1|  unknown [environmental sequence]                   44   0.003 
gb|EAG64183.1|  unknown [environmental sequence]                   44   0.003 
gb|EAG46365.1|  unknown [environmental sequence]                   44   0.003 
gb|EAC95171.1|  unknown [environmental sequence]                   44   0.003 
gb|EAF78532.1|  unknown [environmental sequence]                   44   0.003 
gb|EAB86213.1|  unknown [environmental sequence]                   44   0.003 
emb|CAL56229.1|  COG0776: Bacterial nucleoid DNA-binding pro...    44   0.003 
ref|YP_537905.1|  Integration host factor beta-subunit [Rick...    44   0.003 
ref|NP_218692.1|  DNA-binding protein II [Treponema pallidum...    44   0.003 
ref|NP_774952.1|  HNS-type DNA binding protein [Bradyrhizobi...    44   0.003 
gb|EAK18511.1|  unknown [environmental sequence]                   44   0.003 
gb|EAJ17271.1|  unknown [environmental sequence]                   44   0.003 
gb|EAI39081.1|  unknown [environmental sequence]                   44   0.003 
gb|EAH42053.1|  unknown [environmental sequence]                   44   0.003 
gb|EAD33233.1|  unknown [environmental sequence]                   44   0.003 
gb|EAD22736.1|  unknown [environmental sequence]                   44   0.003 
gb|EAC83434.1|  unknown [environmental sequence]                   44   0.003 
gb|EAF62811.1|  unknown [environmental sequence]                   44   0.003 
gb|EAC16486.1|  unknown [environmental sequence]                   44   0.003 
gb|EAB97203.1|  unknown [environmental sequence]                   44   0.003 
gb|EAB11992.1|  unknown [environmental sequence]                   44   0.003 
ref|YP_010355.1|  DNA-binding protein HU, beta subunit [Desu...    44   0.003 
ref|YP_009620.1|  DNA-binding protein HU [Desulfovibrio vulg...    44   0.003 
ref|YP_032211.1|  integration host factor alpha subunit [Bar...    44   0.003 
ref|NP_393571.1|  DNA-binding protein HTa [Thermoplasma acid...    44   0.003 
ref|YP_603647.1|  histone-like protein DNA-binding protein [...    44   0.003 
gb|EAK31813.1|  unknown [environmental sequence]                   43   0.005 
gb|EAG93905.1|  unknown [environmental sequence]                   43   0.005 
gb|EAD29311.1|  unknown [environmental sequence]                   43   0.005 
gb|EAC93003.1|  unknown [environmental sequence]                   43   0.005 
gb|EAG16484.1|  unknown [environmental sequence]                   43   0.005 
gb|EAF64542.1|  unknown [environmental sequence]                   43   0.005 
gb|EAF63110.1|  unknown [environmental sequence]                   43   0.005 
gb|EAC09180.1|  unknown [environmental sequence]                   43   0.005 
gb|EAD88126.1|  unknown [environmental sequence]                   43   0.005 
ref|YP_665857.1|  histone-like DNA-binding protein [Mesorhiz...    43   0.005 
ref|YP_387013.1|  histone-like DNA-binding protein [Desulfov...    43   0.005 
ref|NP_809824.1|  putative integration host factor IHF alpha...    43   0.005 
ref|NP_950765.1|  bacterial nucleoid DNA-binding protein [On...    43   0.005 
ref|NP_950569.1|  bacterial nucleoid DNA-binding protein [On...    43   0.005 
gb|EAK40287.1|  unknown [environmental sequence]                   43   0.006 
gb|EAI88869.1|  unknown [environmental sequence]                   43   0.006 
gb|EAI57610.1|  unknown [environmental sequence]                   43   0.006 
gb|EAI30663.1|  unknown [environmental sequence]                   43   0.006 
gb|EAD38011.1|  unknown [environmental sequence]                   43   0.006 
gb|EAG73475.1|  unknown [environmental sequence]                   43   0.006 
gb|EAG59739.1|  unknown [environmental sequence]                   43   0.006 
gb|EAG56540.1|  unknown [environmental sequence]                   43   0.006 
gb|EAD06561.1|  unknown [environmental sequence]                   43   0.006 
gb|EAG36919.1|  unknown [environmental sequence]                   43   0.006 
gb|EAC89070.1|  unknown [environmental sequence]                   43   0.006 
gb|EAC17656.1|  unknown [environmental sequence]                   43   0.006 
gb|EAB69167.1|  unknown [environmental sequence]                   43   0.006 
gb|EAB61517.1|  unknown [environmental sequence]                   43   0.006 
gb|EAB19201.1|  unknown [environmental sequence] >gi|4291652...    43   0.006 
gb|EAB07861.1|  unknown [environmental sequence]                   43   0.006 
gb|EAB03100.1|  unknown [environmental sequence]                   43   0.006 
gb|EAE20598.1|  unknown [environmental sequence]                   43   0.006 
ref|YP_594807.1|  Bacterial nucleoid DNA-binding protein [La...    43   0.006 
ref|ZP_01274839.1|  Histone-like bacterial DNA-binding prote...    43   0.006 
ref|YP_467404.1|  Histone-like DNA-binding protein [Anaeromy...    43   0.006 
ref|YP_033576.1|  integration host factor alpha subunit [Bar...    43   0.006 
sp|P04445|TF1_BPSP1  Transcription factor 1 >gi|1942238|pdb|...    43   0.006 
pdb|1EXE|A  Chain A, Solution Structure Of A Mutant Of Trans...    43   0.006 
ref|ZP_00143109.1|  integration host factor beta-subunit [Ri...    43   0.006 
gb|EAJ90649.1|  unknown [environmental sequence]                   42   0.008 
gb|EAJ32142.1|  unknown [environmental sequence]                   42   0.008 
gb|EAI62201.1|  unknown [environmental sequence]                   42   0.008 
gb|EAI13925.1|  unknown [environmental sequence]                   42   0.008 
gb|EAH84901.1|  unknown [environmental sequence]                   42   0.008 
gb|EAD61400.1|  unknown [environmental sequence]                   42   0.008 
gb|EAC04006.1|  unknown [environmental sequence]                   42   0.008 
gb|EAF28770.1|  unknown [environmental sequence]                   42   0.008 
ref|YP_988943.1|  integration host factor, alpha subunit [Ba...    42   0.008 
ref|YP_594009.1|  histone-like DNA-binding protein [Deinococ...    42   0.008 
ref|NP_059689.1|  hupT [Agrobacterium tumefaciens] >gi|11631...    42   0.008 
gb|EAK78276.1|  unknown [environmental sequence]                   42   0.010 
gb|EAJ11976.1|  unknown [environmental sequence]                   42   0.010 
gb|EAG70510.1|  unknown [environmental sequence]                   42   0.010 
gb|EAC40925.1|  unknown [environmental sequence]                   42   0.010 
gb|EAF15890.1|  unknown [environmental sequence]                   42   0.010 
gb|EAB26081.1|  unknown [environmental sequence]                   42   0.010 
ref|ZP_01376065.1|  hypothetical protein Ccur5_01001212 [Cam...    42   0.010 
ref|YP_589161.1|  histone-like DNA-binding protein [Acidobac...    42   0.010 
ref|YP_445195.1|  probable DNA-binding protein HU [Salinibac...    42   0.010 
ref|NP_950906.1|  bacterial nucleoid DNA-binding protein [On...    42   0.010 
ref|NP_950577.1|  bacterial nucleoid DNA-binding protein [On...    42   0.010 
ref|NP_950654.1|  bacterial nucleoid DNA-binding protein [On...    42   0.010 
ref|ZP_00049004.1|  COG0776: Bacterial nucleoid DNA-binding ...    42   0.010 
gb|EAK12703.1|  unknown [environmental sequence]                   42   0.013 
gb|EAJ42095.1|  unknown [environmental sequence]                   42   0.013 
gb|EAC18109.1|  unknown [environmental sequence]                   42   0.013 
gb|EAB81998.1|  unknown [environmental sequence]                   42   0.013 
ref|YP_179975.1|  putative integration host factor alpha-sub...    42   0.013 
ref|NP_950315.1|  bacterial nucleoid DNA-binding protein [On...    42   0.013 
ref|NP_078116.1|  DNA-binding protein Hu-alpha (HU-2) [Ureap...    42   0.013 
ref|NP_110679.1|  Nucleoid DNA-binding protein (HB-related) ...    42   0.013 
ref|ZP_00340401.1|  COG0776: Bacterial nucleoid DNA-binding ...    42   0.013 
gb|EAJ22564.1|  unknown [environmental sequence]                   41   0.017 
gb|EAE02500.1|  unknown [environmental sequence] >gi|4436653...    41   0.017 
gb|EAH29771.1|  unknown [environmental sequence]                   41   0.017 
gb|EAH15698.1|  unknown [environmental sequence]                   41   0.017 
gb|EAF25942.1|  unknown [environmental sequence]                   41   0.017 
gb|EAE88716.1|  unknown [environmental sequence]                   41   0.017 
ref|ZP_01608693.1|  histone family protein DNA-binding prote...    41   0.017 
ref|NP_396041.1|  hypothetical protein AGR_pAT_bx237 [Agroba...    41   0.017 
ref|ZP_01112506.1|  hypothetical protein MADE_09413 [Alterom...    41   0.017 
ref|ZP_01055428.1|  DNA-binding protein HU [Roseobacter sp. ...    41   0.017 
gb|EAK03404.1|  unknown [environmental sequence]                   41   0.023 
gb|EAJ86287.1|  unknown [environmental sequence]                   41   0.023 
gb|EAH41146.1|  unknown [environmental sequence]                   41   0.023 
gb|EAG68009.1|  unknown [environmental sequence]                   41   0.023 
gb|EAC54831.1|  unknown [environmental sequence]                   41   0.023 
gb|EAC13746.1|  unknown [environmental sequence]                   41   0.023 
gb|EAB90711.1|  unknown [environmental sequence]                   41   0.023 
gb|EAB63334.1|  unknown [environmental sequence]                   41   0.023 
gb|EAB52559.1|  unknown [environmental sequence]                   41   0.023 
ref|ZP_01380138.1|  hypothetical protein RbelO_01000932 [Ric...    41   0.023 
ref|ZP_01315073.1|  hypothetical protein Wendoof_01000090 [W...    41   0.023 
ref|YP_067462.1|  integration host factor beta subunit [Rick...    41   0.023 
ref|YP_344458.1|  Histone-like DNA-binding protein [Nitrosoc...    41   0.023 
ref|YP_197892.1|  Bacterial nucleoid DNA-binding protein, Hu...    41   0.023 
ref|YP_302756.1|  Histone-like bacterial DNA-binding protein...    41   0.023 
ref|NP_360394.1|  integration host factor beta-subunit [Rick...    41   0.023 
ref|NP_220897.1|  hypothetical protein RP524 [Rickettsia pro...    41   0.023 
ref|ZP_00373358.1|  DNA-binding protein, HU family [Wolbachi...    41   0.023 
ref|ZP_00055681.2|  COG0776: Bacterial nucleoid DNA-binding ...    41   0.023 
gb|EAI45155.1|  unknown [environmental sequence]                   40   0.030 
gb|EAH15247.1|  unknown [environmental sequence]                   40   0.030 
gb|EAD52839.1|  unknown [environmental sequence]                   40   0.030 
gb|EAD17465.1|  unknown [environmental sequence]                   40   0.030 
gb|EAG31853.1|  unknown [environmental sequence]                   40   0.030 
gb|EAC79444.1|  unknown [environmental sequence]                   40   0.030 
gb|EAB27761.1|  unknown [environmental sequence]                   40   0.030 
ref|YP_770763.1|  putative DNA-binding protein Hu-alpha [Rhi...    40   0.030 
gb|AAZ32517.1|  nucleoid DNA binding protein [uncultured eur...    40   0.030 
ref|NP_966810.1|  DNA-binding protein, HU family [Wolbachia ...    40   0.030 
ref|ZP_01037214.1|  DNA-binding protein HU [Roseovarius sp. ...    40   0.030 
ref|ZP_01002334.1|  DNA-binding protein HU [Loktanella vestf...    40   0.030 
ref|ZP_00914908.1|  Histone-like bacterial DNA-binding prote...    40   0.030 
ref|YP_354468.1|  DNA-binding protein HU, form N [Rhodobacte...    40   0.030 
gb|EAJ56799.1|  unknown [environmental sequence]                   40   0.039 
gb|EAI70347.1|  unknown [environmental sequence]                   40   0.039 
gb|EAH22518.1|  unknown [environmental sequence]                   40   0.039 
gb|EAC76837.1|  unknown [environmental sequence]                   40   0.039 
gb|EAF93629.1|  unknown [environmental sequence]                   40   0.039 
gb|EAF05832.1|  unknown [environmental sequence]                   40   0.039 
gb|EAE68609.1|  unknown [environmental sequence]                   40   0.039 
gb|EAA96512.1|  unknown [environmental sequence]                   40   0.039 
ref|YP_063210.1|  DNA-binding HU protein [Leifsonia xyli sub...    40   0.039 
ref|YP_153449.1|  hypothetical protein AM006 [Anaplasma marg...    40   0.039 
ref|ZP_01129106.1|  DNA-binding HU protein [marine actinobac...    40   0.039 
gb|EAJ39422.1|  unknown [environmental sequence]                   40   0.050 
gb|EAI31467.1|  unknown [environmental sequence]                   40   0.050 
gb|EAC23793.1|  unknown [environmental sequence]                   40   0.050 
gb|EAF34202.1|  unknown [environmental sequence]                   40   0.050 
gb|EAD79105.1|  unknown [environmental sequence]                   40   0.050 
ref|ZP_01668359.1|  histone family protein DNA-binding prote...    40   0.050 
ref|ZP_00373686.1|  DNA-binding protein, HU family [Wolbachi...    40   0.050 
gb|EAH71603.1|  unknown [environmental sequence]                   39   0.066 
gb|EAG77496.1|  unknown [environmental sequence]                   39   0.066 
gb|EAF19704.1|  unknown [environmental sequence]                   39   0.066 
gb|EAE58681.1|  unknown [environmental sequence]                   39   0.066 
gb|EAB06754.1|  unknown [environmental sequence]                   39   0.066 
gb|EAE24403.1|  unknown [environmental sequence]                   39   0.066 
gb|EAE01174.1|  unknown [environmental sequence]                   39   0.066 
ref|ZP_01154802.1|  DNA-binding protein HU [Oceanicola granu...    39   0.066 
ref|ZP_01013864.1|  DNA-binding protein HU [Rhodobacterales ...    39   0.066 
ref|ZP_00373888.1|  DNA-binding protein, HU family [Wolbachi...    39   0.066 
gb|EAH80197.1|  unknown [environmental sequence]                   39   0.086 
gb|EAH46308.1|  unknown [environmental sequence]                   39   0.086 
gb|EAD42419.1|  unknown [environmental sequence]                   39   0.086 
gb|EAC92107.1|  unknown [environmental sequence]                   39   0.086 
gb|EAC09701.1|  unknown [environmental sequence]                   39   0.086 
gb|EAB69722.1|  unknown [environmental sequence]                   39   0.086 
ref|ZP_01444901.1|  DNA-binding protein HU [Roseovarius sp. ...    39   0.086 
ref|YP_398604.1|  histone-like DNA binding protein [Clostrid...    39   0.086 
ref|YP_099707.1|  DNA-binding protein HU [Bacteroides fragil...    39   0.086 

>ref|NP_286787.1| integration host factor beta subunit [Escherichia coli O157:H7
          EDL933]
 ref|NP_309022.1| integration host factor beta subunit [Escherichia coli O157:H7
          str. Sakai]
 ref|NP_415432.1| integration host factor subunit beta [Escherichia coli K12]
 ref|NP_706831.1| integration host factor beta subunit [Shigella flexneri 2a str.
          301]
 ref|NP_752977.1| integration host factor beta subunit [Escherichia coli CFT073]
 ref|NP_836618.1| integration host factor beta subunit [Shigella flexneri 2a str.
          2457T]
 ref|YP_309888.1| integration host factor (IHF), beta subunit [Shigella sonnei
          Ss046]
 ref|ZP_00698339.1| COG0776: Bacterial nucleoid DNA-binding protein [Shigella boydii
          BS512]
 ref|ZP_00703234.1| COG0776: Bacterial nucleoid DNA-binding protein [Escherichia coli
          E24377A]
 ref|ZP_00705170.1| COG0776: Bacterial nucleoid DNA-binding protein [Escherichia coli
          HS]
 ref|ZP_00710555.1| COG0776: Bacterial nucleoid DNA-binding protein [Escherichia coli
          B171]
 ref|ZP_00716405.1| COG0776: Bacterial nucleoid DNA-binding protein [Escherichia coli
          B7A]
 ref|ZP_00718766.1| COG0776: Bacterial nucleoid DNA-binding protein [Escherichia coli
          E110019]
 ref|ZP_00724876.1| COG0776: Bacterial nucleoid DNA-binding protein [Escherichia coli
          F11]
 ref|ZP_00728889.1| COG0776: Bacterial nucleoid DNA-binding protein [Escherichia coli
          E22]
 ref|ZP_00734653.1| COG0776: Bacterial nucleoid DNA-binding protein [Escherichia coli
          53638]
 ref|YP_408598.1| integration host factor (IHF), beta subunit [Shigella boydii
          Sb227]
 ref|YP_403914.1| integration host factor, beta subunit [Shigella dysenteriae
          Sd197]
 ref|ZP_00922664.1| COG0776: Bacterial nucleoid DNA-binding protein [Shigella
          dysenteriae 1012]
 ref|ZP_00924495.1| COG0776: Bacterial nucleoid DNA-binding protein [Escherichia coli
          101-1]
 ref|AP_001542.1| integration host factor (IHF), DNA-binding protein, beta subunit
          [Escherichia coli W3110]
 ref|YP_539999.1| beta subunit of IHF transcriptional dual regulator [Escherichia
          coli UTI89]
 ref|YP_668839.1| integration host factor beta-subunit [Escherichia coli 536]
 ref|YP_688440.1| integration host factor beta subunit [Shigella flexneri 5 str.
          8401]
 sp|P0A6Y1|IHFB_ECOLI Integration host factor subunit beta (IHF-beta)
 sp|P0A6Y2|IHFB_ECOL6 Integration host factor subunit beta (IHF-beta)
 sp|P0A6Y3|IHFB_ECO57 Integration host factor subunit beta (IHF-beta)
 sp|P0A6Y4|IHFB_SHIFL Integration host factor subunit beta (IHF-beta)
 pdb|1IHF|B Chain B, Crystal Structure Of An Ihf-Dna Complex: A
          Protein-Induced Dna U-Turn
 pdb|1OWG|B Chain B, Crystal Structure Of Wt Ihf Complexed With An Altered H'
          Site (T44a)
 pdb|2HT0|B Chain B, Ihf Bound To Doubly Nicked Dna
 gb|AAG55397.1|AE005280_8 integration host factor (IHF), beta subunit; site-specific
          recombination [Escherichia coli O157:H7 EDL933]
 gb|AAN79520.1|AE016758_124 Integration host factor beta-subunit [Escherichia coli CFT073]
 emb|CAA28557.1| IHF (AA 1-93) [Escherichia coli]
 dbj|BAA35656.1| integration host factor (IHF), DNA-binding protein, beta subunit
          [Escherichia coli W3110]
 gb|AAC73998.1| integration host factor (IHF), DNA-binding protein, beta subunit
          [Escherichia coli K12]
 dbj|BAB34418.1| integration host factor (IHF) beta subunit [Escherichia coli
          O157:H7 str. Sakai]
 gb|AAN42538.1| integration host factor (IHF), beta subunit [Shigella flexneri 2a
          str. 301]
 gb|AAP16424.1| integration host factor (IHF), beta subunit [Shigella flexneri 2a
          str. 2457T]
 gb|AAY89705.1| IhfB [Escherichia coli]
 gb|AAZ87653.1| integration host factor (IHF), beta subunit [Shigella sonnei
          Ss046]
 gb|ABB62423.1| integration host factor, beta subunit [Shigella dysenteriae
          Sd197]
 gb|ABB66770.1| integration host factor (IHF), beta subunit [Shigella boydii
          Sb227]
 gb|ABE06468.1| beta subunit of IHF transcriptional dual regulator [Escherichia
          coli UTI89]
 gb|ABG68938.1| integration host factor beta-subunit [Escherichia coli 536]
 gb|ABF03135.1| integration host factor beta subunit [Shigella flexneri 5 str.
          8401]
 gb|EAY46919.1| integration host factor, beta subunit [Escherichia coli B]
          Length = 94

 Score =  191 bits (486), Expect = 8e-48
 Identities = 94/94 (100%), Positives = 94/94 (100%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94



>ref|NP_455469.1| integration host factor beta subunit [Salmonella enterica subsp.
          enterica serovar Typhi str. CT18]
 ref|NP_459957.1| integration host factor beta subunit [Salmonella typhimurium LT2]
 ref|NP_805717.1| integration host factor beta subunit [Salmonella enterica subsp.
          enterica serovar Typhi Ty2]
 ref|YP_151043.1| integration host factor beta subunit [Salmonella enterica subsp.
          enterica serovar Paratyphi A str. ATCC 9150]
 ref|YP_215923.1| integration host factor beta subunit [Salmonella enterica subsp.
          enterica serovar Choleraesuis str. SC-B67]
 sp|P64395|IHFB_SALTI Integration host factor subunit beta (IHF-beta)
 sp|P64394|IHFB_SALTY Integration host factor subunit beta (IHF-beta)
 pir||AD0614 integration host factor beta-chain (IHF-beta) [imported] -
          Salmonella enterica subsp. enterica serovar Typhi
          (strain CT18)
 gb|AAL19916.1| integration host factor (IHF), beta subunit [Salmonella
          typhimurium LT2]
 emb|CAD05382.1| integration host factor beta-subunit (IHF-beta) [Salmonella
          enterica subsp. enterica serovar Typhi]
 gb|AAO69566.1| integration host factor beta-subunit [Salmonella enterica subsp.
          enterica serovar Typhi Ty2]
 gb|AAV77731.1| integration host factor beta-subunit (IHF-beta) [Salmonella
          enterica subsp. enterica serovar Paratyphi A str. ATCC
          9150]
 gb|AAX64842.1| integration host factor (IHF), beta subunit; site-specific
          recombination [Salmonella enterica subsp. enterica
          serovar Choleraesuis str. SC-B67]
          Length = 94

 Score =  189 bits (481), Expect = 3e-47
 Identities = 93/94 (98%), Positives = 93/94 (98%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLATQQSHIPAK VEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIERLATQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94



>pdb|1OUZ|B Chain B, Crystal Structure Of A Mutant Ihf (Betae44a) Complexed
          With A Variant H' Site (T44a)
 pdb|1OWF|B Chain B, Crystal Structure Of A Mutant Ihf (Betae44a) Complexed
          With The Native H' Site
          Length = 94

 Score =  189 bits (480), Expect = 4e-47
 Identities = 93/94 (98%), Positives = 93/94 (98%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERI IRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIAIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94



>ref|ZP_01588963.1| integration host factor, beta subunit [Enterobacter sp. 638]
 gb|EAV84931.1| integration host factor, beta subunit [Enterobacter sp. 638]
          Length = 95

 Score =  187 bits (474), Expect = 2e-46
 Identities = 91/94 (96%), Positives = 93/94 (98%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA+QQSHIPAK VEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIERLASQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTGDKV+LEGKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGDKVDLEGKYVPHFKPGKELRDRANIYG 94



>gb|EAG64268.1| unknown [environmental sequence]
          Length = 94

 Score =  186 bits (473), Expect = 3e-46
 Identities = 91/94 (96%), Positives = 92/94 (97%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLATQQ HIPAK VEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIERLATQQPHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTGDKV+LEGKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGDKVDLEGKYVPHFKPGKELRDRANIYG 94



>gb|EAG53021.1| unknown [environmental sequence]
          Length = 95

 Score =  186 bits (471), Expect = 4e-46
 Identities = 91/93 (97%), Positives = 92/93 (98%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA+QQSHIPAK VEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIERLASQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIY 93
          GRNPKTGDKVELEGKYVPHFKPGKELRDRANIY
Sbjct: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIY 93



>ref|NP_404986.1| integration host factor beta subunit [Yersinia pestis CO92]
 ref|NP_670080.1| integration host factor beta subunit [Yersinia pestis KIM]
 ref|NP_992566.1| integration host factor beta subunit [Yersinia pestis biovar
          Microtus str. 91001]
 ref|YP_069949.1| integration host factor beta subunit [Yersinia pseudotuberculosis
          IP 32953]
 ref|ZP_00798123.1| COG0776: Bacterial nucleoid DNA-binding protein [Yersinia pestis
          Angola]
 ref|ZP_01178054.1| COG0776: Bacterial nucleoid DNA-binding protein [Yersinia pestis
          biovar Orientalis str. IP275]
 ref|YP_650597.1| integration host factor beta-subunit [Yersinia pestis Antiqua]
 ref|YP_648512.1| integration host factor beta-subunit [Yersinia pestis Nepal516]
 ref|ZP_01497184.1| hypothetical protein YpseI_02002342 [Yersinia pseudotuberculosis
          IP 31758]
 sp|Q8ZGB1|IHFB_YERPE Integration host factor subunit beta (IHF-beta)
 gb|AAM86331.1|AE013881_1 integration host factor (IHF), beta subunit [Yersinia pestis KIM]
 gb|AAS61443.1| integration host factor beta-subunit [Yersinia pestis biovar
          Microtus str. 91001]
 emb|CAH20658.1| integration host factor beta-subunit [Yersinia pseudotuberculosis
          IP 32953]
 gb|ABG18912.1| integration host factor beta-subunit [Yersinia pestis Nepal516]
 gb|ABG12652.1| integration host factor beta-subunit [Yersinia pestis Antiqua]
 emb|CAL20045.1| integration host factor beta-subunit [Yersinia pestis CO92]
          Length = 94

 Score =  182 bits (461), Expect = 6e-45
 Identities = 88/94 (93%), Positives = 90/94 (95%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA QQSH+PAK VEDAVKEMLEHMA TLA+GERIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLAGQQSHVPAKVVEDAVKEMLEHMAGTLAEGERIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94



>sp|P23303|IHFB_SERMA Integration host factor subunit beta (IHF-beta)
 gb|AAA26557.1| integration host factor beta-subunit
          Length = 94

 Score =  181 bits (460), Expect = 8e-45
 Identities = 88/94 (93%), Positives = 91/94 (96%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA QQSHIPAK VEDAVKEMLEHMA+TLA+GERIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLAGQQSHIPAKAVEDAVKEMLEHMAATLAEGERIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTGDKVEL+GKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGDKVELDGKYVPHFKPGKELRDRANIYG 94



>ref|ZP_01536337.1| integration host factor, beta subunit [Serratia proteamaculans
          568]
 gb|EAV31687.1| integration host factor, beta subunit [Serratia proteamaculans
          568]
          Length = 94

 Score =  180 bits (457), Expect = 2e-44
 Identities = 87/94 (92%), Positives = 90/94 (95%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA QQSH+PAK VEDAVKEMLEHMA+TLA GERIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLAGQQSHVPAKAVEDAVKEMLEHMAATLADGERIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTGDKVEL+GKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGDKVELDGKYVPHFKPGKELRDRANIYG 94



>ref|YP_050681.1| integration host factor beta subunit [Erwinia carotovora subsp.
          atroseptica SCRI1043]
 emb|CAG75489.1| integration host factor beta-subunit [Erwinia carotovora subsp.
          atroseptica SCRI1043]
          Length = 94

 Score =  179 bits (455), Expect = 3e-44
 Identities = 88/94 (93%), Positives = 90/94 (95%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA QQSHIPAK VEDAVKEMLE MASTLA+G+RIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLAGQQSHIPAKVVEDAVKEMLEQMASTLAEGDRIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94



>ref|ZP_00822352.1| COG0776: Bacterial nucleoid DNA-binding protein [Yersinia
          bercovieri ATCC 43970]
 ref|ZP_00826907.1| COG0776: Bacterial nucleoid DNA-binding protein [Yersinia
          mollaretii ATCC 43969]
 ref|ZP_00834654.1| COG0776: Bacterial nucleoid DNA-binding protein [Yersinia
          intermedia ATCC 29909]
          Length = 94

 Score =  179 bits (453), Expect = 5e-44
 Identities = 87/94 (92%), Positives = 89/94 (94%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA QQSH+PAK VEDAVKEMLEHMA TLA+GERIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLAGQQSHVPAKAVEDAVKEMLEHMAGTLAEGERIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTG KVELEGKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGAKVELEGKYVPHFKPGKELRDRANIYG 94



>ref|ZP_00830388.1| COG0776: Bacterial nucleoid DNA-binding protein [Yersinia
          frederiksenii ATCC 33641]
          Length = 94

 Score =  178 bits (451), Expect = 9e-44
 Identities = 86/94 (91%), Positives = 89/94 (94%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA QQSH+PAK VEDAVKEMLEHMA TLA+GERIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLAGQQSHVPAKVVEDAVKEMLEHMAGTLAEGERIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTG KVEL+GKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGTKVELDGKYVPHFKPGKELRDRANIYG 94



>ref|YP_001005836.1| integration host factor beta-subunit [Yersinia enterocolitica
          subsp. enterocolitica 8081]
 emb|CAL11620.1| integration host factor beta-subunit [Yersinia enterocolitica
          subsp. enterocolitica 8081]
          Length = 94

 Score =  177 bits (449), Expect = 2e-43
 Identities = 86/94 (91%), Positives = 88/94 (93%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA QQSH+P K VEDAVKEMLEHMA TLA+GERIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLAGQQSHVPTKVVEDAVKEMLEHMAGTLAEGERIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTG KVELEGKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGAKVELEGKYVPHFKPGKELRDRANIYG 94



>sp|P37983|IHFB_DICD3 Integration host factor subunit beta (IHF-beta)
 emb|CAA52770.1| integration host factor beta subunit [Erwinia chrysanthemi]
 prf||2103145B integration host factor
          Length = 94

 Score =  176 bits (446), Expect = 3e-43
 Identities = 86/94 (91%), Positives = 89/94 (94%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA QQSHIPAK VEDAVKEMLE MA+TLA G+RIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLAGQQSHIPAKVVEDAVKEMLEQMATTLASGDRIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTG+KVELEGKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGEKVELEGKYVPHFKPGKELRDRANIYG 94



>ref|YP_454674.1| integration host factor beta-subunit [Sodalis glossinidius str.
          'morsitans']
 dbj|BAE74269.1| integration host factor beta-subunit [Sodalis glossinidius str.
          'morsitans']
          Length = 94

 Score =  174 bits (441), Expect = 1e-42
 Identities = 85/94 (90%), Positives = 88/94 (93%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA Q +HI AK VEDAVKEMLEHMA+TLA GERIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLAGQHAHIQAKVVEDAVKEMLEHMATTLASGERIEIRGFGSFSLHYRAPRI 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
          GRNPKTGD+VELEGKYVPHFKPGKELRDRANIYG
Sbjct: 61 GRNPKTGDRVELEGKYVPHFKPGKELRDRANIYG 94



>ref|NP_928912.1| integration host factor beta subunit [Photorhabdus luminescens
          subsp. laumondii TTO1]
 emb|CAE13916.1| integration host factor beta-subunit (IHF-beta) [Photorhabdus
          luminescens subsp. laumondii TTO1]
          Length = 94

 Score =  172 bits (437), Expect = 4e-42
 Identities = 84/93 (90%), Positives = 87/93 (93%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA QQSHI AKTVEDAVKE+L+HMA TLA GERIE+RGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLAGQQSHISAKTVEDAVKEILDHMAITLADGERIEVRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIY 93
          GRNPKTGDKVELEGKYVPHFKPGKELRDR NIY
Sbjct: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRVNIY 93



>ref|YP_130634.1| putative integration host factor, beta subunit [Photobacterium
          profundum SS9]
 emb|CAG20832.1| putative integration host factor, beta subunit [Photobacterium
          profundum SS9]
          Length = 96

 Score =  164 bits (415), Expect = 1e-39
 Identities = 77/91 (84%), Positives = 85/91 (93%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERL +QQ+H+ AK VEDA+KE+LEHMA TLA+G+RIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLCSQQTHLSAKQVEDAIKEILEHMAGTLAEGDRIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTGDKVEL+GKYVPHFKPGKELRDR N
Sbjct: 61 GRNPKTGDKVELDGKYVPHFKPGKELRDRVN 91



>ref|NP_761784.1| integration host factor beta subunit [Vibrio vulnificus CMCP6]
 sp|Q8D8J3|IHFB_VIBVU Integration host factor subunit beta (IHF-beta)
 gb|AAO11311.1|AE016807_30 Bacterial nucleoid DNA-binding protein [Vibrio vulnificus CMCP6]
          Length = 93

 Score =  159 bits (403), Expect = 3e-38
 Identities = 75/92 (81%), Positives = 83/92 (90%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERL  +Q+H+ AK +EDAVK++LEHMASTL  G+RIEIRGFGSFSLHYR PR 
Sbjct: 1  MTKSELIERLCAEQTHLSAKEIEDAVKDILEHMASTLESGDRIEIRGFGSFSLHYREPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANI 92
          GRNPKTGDKVELEGKYVPHFKPGKELR+R NI
Sbjct: 61 GRNPKTGDKVELEGKYVPHFKPGKELRERVNI 92



>ref|NP_798408.1| integration host factor beta subunit [Vibrio parahaemolyticus
          RIMD 2210633]
 sp|Q87N46|IHFB_VIBPA Integration host factor subunit beta (IHF-beta)
 dbj|BAC60292.1| integration host factor, beta subunit [Vibrio parahaemolyticus
          RIMD 2210633]
          Length = 93

 Score =  159 bits (402), Expect = 4e-38
 Identities = 75/92 (81%), Positives = 83/92 (90%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERL  +Q+H+ AK VEDAVK++LEHMASTL  G+RIEIRGFGSFSLHYR PR 
Sbjct: 1  MTKSELIERLCAEQTHLSAKEVEDAVKDILEHMASTLESGDRIEIRGFGSFSLHYREPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANI 92
          GRNPKTGDKVELEGKYVPHFKPGKELR+R N+
Sbjct: 61 GRNPKTGDKVELEGKYVPHFKPGKELRERVNL 92



>ref|NP_231548.1| integration host factor beta subunit [Vibrio cholerae O1 biovar
          eltor str. N16961]
 ref|ZP_00756671.1| COG0776: Bacterial nucleoid DNA-binding protein [Vibrio cholerae
          O395]
 ref|ZP_01678704.1| integration host factor, beta subunit [Vibrio cholerae 2740-80]
 sp|Q9KQT4|IHFB_VIBCH Integration host factor subunit beta (IHF-beta)
 gb|AAF95062.1| integration host factor, beta subunit [Vibrio cholerae O1 biovar
          eltor str. N16961]
 gb|EAX56896.1| integration host factor, beta subunit [Vibrio cholerae 2740-80]
          Length = 92

 Score =  159 bits (401), Expect = 6e-38
 Identities = 75/92 (81%), Positives = 82/92 (89%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERL  +Q+H+ AK +EDAVK +LEHMASTL  GERIEIRGFGSFSLHYR PR 
Sbjct: 1  MTKSELIERLCAEQTHLSAKEIEDAVKNILEHMASTLEAGERIEIRGFGSFSLHYREPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANI 92
          GRNPKTGDKVELEGKYVPHFKPGKELR+R N+
Sbjct: 61 GRNPKTGDKVELEGKYVPHFKPGKELRERVNL 92



>ref|ZP_01237052.1| putative integration host factor, beta subunit [Vibrio angustum
          S14]
 gb|EAS62818.1| putative integration host factor, beta subunit [Vibrio angustum
          S14]
          Length = 90

 Score =  158 bits (400), Expect = 7e-38
 Identities = 74/89 (83%), Positives = 85/89 (95%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERL +QQ+H+ AK VEDA+K++LE+MA+TLA+G+RIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLCSQQTHLSAKQVEDAIKDILENMANTLAEGDRIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDR 89
          GRNPKTGDKVEL+GKYVPHFKPGKELRDR
Sbjct: 61 GRNPKTGDKVELDGKYVPHFKPGKELRDR 89



>ref|NP_934094.1| integration host factor beta subunit [Vibrio vulnificus YJ016]
 sp|Q7MLX5|IHFB_VIBVY Integration host factor subunit beta (IHF-beta)
 dbj|BAC94065.1| bacterial nucleoid DNA-binding protein [Vibrio vulnificus YJ016]
          Length = 93

 Score =  157 bits (398), Expect = 1e-37
 Identities = 74/92 (80%), Positives = 83/92 (90%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERL  +Q+H+ AK +EDAVK++LEHMASTL  G+RIEIRGFGSFSLHYR PR 
Sbjct: 1  MTKSELIERLCAEQTHLSAKEIEDAVKDILEHMASTLESGDRIEIRGFGSFSLHYREPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANI 92
          GRNPKTGDKVELEGKYVPHFKPGKELR+R +I
Sbjct: 61 GRNPKTGDKVELEGKYVPHFKPGKELRERVHI 92



>ref|ZP_01680276.1| integration host factor, beta subunit [Vibrio cholerae V52]
 gb|EAX62872.1| integration host factor, beta subunit [Vibrio cholerae V52]
          Length = 92

 Score =  156 bits (395), Expect = 3e-37
 Identities = 74/92 (80%), Positives = 81/92 (88%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKS LIERL  +Q+H+ AK +EDAVK +LEHMASTL  GERIEIRGFGSFSLHYR PR 
Sbjct: 1  MTKSXLIERLCAEQTHLSAKEIEDAVKNILEHMASTLEAGERIEIRGFGSFSLHYREPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANI 92
          GRNPKTGDKVELEGKYVPHFKPGKELR+R N+
Sbjct: 61 GRNPKTGDKVELEGKYVPHFKPGKELRERVNL 92



>ref|YP_927612.1| integration host factor, beta subunit [Shewanella amazonensis
          SB2B]
 gb|ABL99942.1| integration host factor, beta subunit [Shewanella amazonensis
          SB2B]
          Length = 95

 Score =  153 bits (386), Expect = 3e-36
 Identities = 75/91 (82%), Positives = 81/91 (89%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE+LAT+QS + AK VE AVKEMLE MA+TL  GERIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIEKLATRQSQLSAKEVESAVKEMLEQMATTLESGERIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG  VELEGKYVPHFKPGKELR+R +
Sbjct: 61 GRNPKTGTSVELEGKYVPHFKPGKELRERVD 91



>gb|EAI69682.1| unknown [environmental sequence]
          Length = 95

 Score =  152 bits (385), Expect = 4e-36
 Identities = 74/91 (81%), Positives = 81/91 (89%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE+LAT+QS + AK VE A+KEMLE MASTL  G+RIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIEKLATRQSQLSAKEVEGAIKEMLEQMASTLESGDRIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG  VELEGKYVPHFKPGKELR+R +
Sbjct: 61 GRNPKTGSSVELEGKYVPHFKPGKELRERVD 91



>gb|EAH29297.1| unknown [environmental sequence]
          Length = 94

 Score =  152 bits (385), Expect = 4e-36
 Identities = 73/92 (79%), Positives = 81/92 (88%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKS+LIE+LA  + H+PAK VE A+KE+LE MASTL  G+RIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSDLIEQLAASRMHMPAKDVEAAIKEILEQMASTLQNGDRIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANI 92
          GRNPKTGDKVEL GKYVPHFKPGKELR+R NI
Sbjct: 61 GRNPKTGDKVELTGKYVPHFKPGKELRERVNI 92



>ref|YP_856345.1| integration host factor, beta subunit [Aeromonas hydrophila
          subsp. hydrophila ATCC 7966]
 gb|ABK36617.1| integration host factor, beta subunit [Aeromonas hydrophila
          subsp. hydrophila ATCC 7966]
          Length = 94

 Score =  152 bits (385), Expect = 4e-36
 Identities = 73/92 (79%), Positives = 81/92 (88%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKS+LIE+LA  + H+PAK VE A+KE+LE MASTL  G+RIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSDLIEQLAASRMHMPAKDVEAAIKEILEQMASTLQNGDRIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANI 92
          GRNPKTGDKVEL GKYVPHFKPGKELR+R NI
Sbjct: 61 GRNPKTGDKVELTGKYVPHFKPGKELRERVNI 92



>ref|YP_963360.1| integration host factor, beta subunit [Shewanella sp. W3-18-1]
 gb|ABM24806.1| integration host factor, beta subunit [Shewanella sp. W3-18-1]
          Length = 95

 Score =  152 bits (383), Expect = 7e-36
 Identities = 73/91 (80%), Positives = 81/91 (89%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE+LAT+QS + AK VE A+KEMLE MA+TL  G+RIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIEKLATRQSQLSAKEVESAIKEMLEQMATTLESGDRIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG  VELEGKYVPHFKPGKELR+R +
Sbjct: 61 GRNPKTGSSVELEGKYVPHFKPGKELRERVD 91



>gb|EAJ06354.1| unknown [environmental sequence]
          Length = 95

 Score =  151 bits (382), Expect = 9e-36
 Identities = 73/91 (80%), Positives = 81/91 (89%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE+LAT+QS + AK VE A+KEMLE MA+TL  G+RIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIEKLATRQSQLSAKEVEGAIKEMLEQMATTLESGDRIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG  VELEGKYVPHFKPGKELR+R +
Sbjct: 61 GRNPKTGSSVELEGKYVPHFKPGKELRERVD 91



>ref|NP_717991.1| integration host factor, beta subunit [Shewanella oneidensis
          MR-1]
 ref|YP_734056.1| integration host factor, beta subunit [Shewanella sp. MR-4]
 ref|YP_738098.1| integration host factor, beta subunit [Shewanella sp. MR-7]
 ref|YP_869615.1| integration host factor, beta subunit [Shewanella sp. ANA-3]
 gb|AAN55435.1|AE015680_10 integration host factor, beta subunit [Shewanella oneidensis
          MR-1]
 gb|ABI38999.1| integration host factor, beta subunit [Shewanella sp. MR-4]
 gb|ABI43041.1| integration host factor, beta subunit [Shewanella sp. MR-7]
 gb|ABK48209.1| integration host factor, beta subunit [Shewanella sp. ANA-3]
          Length = 95

 Score =  151 bits (382), Expect = 9e-36
 Identities = 73/91 (80%), Positives = 81/91 (89%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE+LAT+QS + AK VE A+KEMLE MA+TL  G+RIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIEKLATRQSQLSAKEVEGAIKEMLEQMATTLESGDRIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG  VELEGKYVPHFKPGKELR+R +
Sbjct: 61 GRNPKTGSSVELEGKYVPHFKPGKELRERVD 91



>ref|ZP_00839266.1| Integration host factor, beta subunit [Shewanella sp. PV-4]
 gb|EAP00774.1| Integration host factor, beta subunit [Shewanella sp. PV-4]
          Length = 95

 Score =  150 bits (380), Expect = 2e-35
 Identities = 73/91 (80%), Positives = 81/91 (89%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE+LAT+QS + AK VE A+KEMLE MA+TL  G+RIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIEKLATRQSQLSAKEVESAIKEMLEQMATTLEGGDRIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG  VELEGKYVPHFKPGKELR+R +
Sbjct: 61 GRNPKTGTSVELEGKYVPHFKPGKELRERVD 91



>ref|YP_750806.1| integration host factor, beta subunit [Shewanella frigidimarina
          NCIMB 400]
 gb|ABI71968.1| integration host factor, beta subunit [Shewanella frigidimarina
          NCIMB 400]
          Length = 95

 Score =  150 bits (378), Expect = 3e-35
 Identities = 72/91 (79%), Positives = 81/91 (89%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE+LAT+QS + AK VE A+KEMLE MA+TL  G+RIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIEKLATRQSQLSAKEVESAIKEMLEQMATTLETGDRIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG  V+LEGKYVPHFKPGKELR+R +
Sbjct: 61 GRNPKTGTSVDLEGKYVPHFKPGKELRERVD 91



>ref|YP_562761.1| integration host factor, beta subunit [Shewanella denitrificans
          OS217]
 gb|ABE55038.1| integration host factor, beta subunit [Shewanella denitrificans
          OS217]
          Length = 95

 Score =  149 bits (377), Expect = 3e-35
 Identities = 72/91 (79%), Positives = 81/91 (89%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE+LAT+QS + AK VE A+KEMLE MA+TL  G+RIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIEKLATRQSQLSAKEVESAIKEMLEQMATTLEGGDRIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG  VEL+GKYVPHFKPGKELR+R +
Sbjct: 61 GRNPKTGTSVELDGKYVPHFKPGKELRERVD 91



>ref|ZP_01614229.1| putative integration host factor (iHF), beta subunit,
          site-specific recombination [Alteromonadales bacterium
          TW-7]
 gb|EAW26493.1| putative integration host factor (iHF), beta subunit,
          site-specific recombination [Alteromonadales bacterium
          TW-7]
          Length = 95

 Score =  148 bits (374), Expect = 8e-35
 Identities = 70/91 (76%), Positives = 80/91 (87%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE LA Q +H+P K VE+AVKE+LE MA +L+  +RIEIRGFGSFSLH+RAPRT
Sbjct: 1  MTKSELIETLAEQHAHVPVKDVENAVKEILEQMAGSLSSSDRIEIRGFGSFSLHFRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTGD VEL+GK+VPHFKPGKELRDR N
Sbjct: 61 GRNPKTGDTVELDGKHVPHFKPGKELRDRVN 91



>ref|YP_339944.1| integration host factor (iHF), beta subunit, site-specific
          recombination [Pseudoalteromonas haloplanktis TAC125]
 emb|CAI86501.1| putative integration host factor (iHF), beta subunit,
          site-specific recombination [Pseudoalteromonas
          haloplanktis TAC125]
          Length = 95

 Score =  148 bits (374), Expect = 8e-35
 Identities = 70/91 (76%), Positives = 80/91 (87%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE LA Q +H+P K VE+AVKE+LE MA +L+  +RIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIETLAQQHAHVPVKDVENAVKEILEQMAGSLSSSDRIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG+ VEL+GK+VPHFKPGKELRDR N
Sbjct: 61 GRNPKTGETVELDGKHVPHFKPGKELRDRVN 91



>ref|YP_662035.1| integration host factor, beta subunit [Pseudoalteromonas
          atlantica T6c]
 gb|ABG40981.1| integration host factor, beta subunit [Pseudoalteromonas
          atlantica T6c]
          Length = 96

 Score =  147 bits (372), Expect = 1e-34
 Identities = 70/91 (76%), Positives = 80/91 (87%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIERLA +  H+P++ VE A+KEMLE MA TL +GERIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERLADKARHVPSRDVELAIKEMLEQMAQTLQKGERIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG+ VEL+GK+VPHFKPGKELR+R N
Sbjct: 61 GRNPKTGETVELDGKHVPHFKPGKELRERVN 91



>ref|ZP_01598965.1| integration host factor, beta subunit [Marinomonas sp. MWYL1]
 gb|EAV90412.1| integration host factor, beta subunit [Marinomonas sp. MWYL1]
          Length = 102

 Score =  147 bits (371), Expect = 2e-34
 Identities = 70/92 (76%), Positives = 77/92 (83%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE L  QQSH+P K VE A+K MLEHM+ +LA GERIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIELLIDQQSHLPVKDVEQAIKAMLEHMSDSLANGERIEIRGFGSFSLHYRAPRI 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANI 92
          GRNPKTG+ VEL  KYVPHFKPGKELR+  N+
Sbjct: 61 GRNPKTGESVELSAKYVPHFKPGKELRELVNL 92



>ref|YP_269056.1| integration host factor, beta subunit [Colwellia psychrerythraea
          34H]
 gb|AAZ25012.1| integration host factor, beta subunit [Colwellia psychrerythraea
          34H]
          Length = 95

 Score =  145 bits (367), Expect = 5e-34
 Identities = 69/92 (75%), Positives = 81/92 (88%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE+LA + SH+ AK VE ++KE+LE MA +L++GERIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIEKLADKLSHLSAKEVEKSIKEILELMAQSLSKGERIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANI 92
          GRNPKTG+ VEL GKYVPHFKPGKELR+R N+
Sbjct: 61 GRNPKTGESVELSGKYVPHFKPGKELRERVNL 92



>ref|YP_205141.1| integration host factor beta-subunit [Vibrio fischeri ES114]
 gb|AAW86253.1| integration host factor beta-subunit [Vibrio fischeri ES114]
          Length = 93

 Score =  143 bits (360), Expect = 3e-33
 Identities = 68/91 (74%), Positives = 79/91 (86%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE+L +++  + AK VED VKE+LE MA+TL  G+RIEIRGFGSFSLHYR PR 
Sbjct: 1  MTKSELIEQLCSKKPQLSAKQVEDTVKEILEQMATTLEGGDRIEIRGFGSFSLHYREPRL 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTGDKVEL+GK+VPHFKPGKELR+R N
Sbjct: 61 GRNPKTGDKVELDGKFVPHFKPGKELRERVN 91



>ref|ZP_01078051.1| integration host factor beta-subunit [Marinomonas sp. MED121]
 gb|EAQ63770.1| integration host factor beta-subunit [Marinomonas sp. MED121]
          Length = 101

 Score =  143 bits (360), Expect = 3e-33
 Identities = 68/91 (74%), Positives = 75/91 (82%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE L  QQSH+P + VE A+K MLEHM+  LA GERIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIELLIDQQSHLPVQDVEQAIKAMLEHMSEVLADGERIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG+ V+L  KYVPHFKPGKELR+  N
Sbjct: 61 GRNPKTGESVDLVAKYVPHFKPGKELRELVN 91



>gb|EAB21478.1| unknown [environmental sequence]
          Length = 111

 Score =  142 bits (359), Expect = 4e-33
 Identities = 68/91 (74%), Positives = 79/91 (86%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIER+A  Q+ + AK +E AVK +L+HMA  LA+GERIEIRGFGSFSLHYR+PR 
Sbjct: 1  MTKSELIERIAAVQTQLSAKDLELAVKMILDHMAKALAEGERIEIRGFGSFSLHYRSPRL 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG+KV+L GKYVPHFKPGKELR+R N
Sbjct: 61 GRNPKTGEKVQLAGKYVPHFKPGKELRERVN 91



>ref|ZP_01627117.1| hypothetical protein MGP2080_15169 [marine gamma proteobacterium
          HTCC2080]
 gb|EAW40122.1| hypothetical protein MGP2080_15169 [marine gamma proteobacterium
          HTCC2080]
          Length = 98

 Score =  142 bits (359), Expect = 4e-33
 Identities = 68/91 (74%), Positives = 78/91 (85%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MT+SELIE++A+QQS +  K VE AVK M++HMA TL+ GERIEIRGFGSFSLHYR PR 
Sbjct: 1  MTRSELIEKIASQQSQLSTKDVELAVKLMIDHMAETLSSGERIEIRGFGSFSLHYREPRQ 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTGD V LEGK+VPHFKPGKELR+R N
Sbjct: 61 GRNPKTGDSVALEGKHVPHFKPGKELRERVN 91



>ref|ZP_01450798.1| integration host factor, beta subunit [alpha proteobacterium
          HTCC2255]
 gb|EAU48936.1| integration host factor, beta subunit [alpha proteobacterium
          HTCC2255]
          Length = 93

 Score =  142 bits (359), Expect = 4e-33
 Identities = 68/91 (74%), Positives = 77/91 (84%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE+L T    +  + +E AVKE+LE+MA TL +GERIEIRGFGSFSLHYRAPRT
Sbjct: 1  MTKSELIEKLMTSYDEVQTREIEVAVKELLEYMAQTLQRGERIEIRGFGSFSLHYRAPRT 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG+ VEL GKYVPHFKPGKELRDR +
Sbjct: 61 GRNPKTGELVELSGKYVPHFKPGKELRDRVD 91



>ref|ZP_01214971.1| putative integration host factor, beta subunit [Psychromonas sp.
          CNPT3]
 gb|EAS40109.1| putative integration host factor, beta subunit [Psychromonas sp.
          CNPT3]
          Length = 95

 Score =  142 bits (358), Expect = 6e-33
 Identities = 67/93 (72%), Positives = 79/93 (84%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKS+LIE+L  +   +  + VED+VKE L+ M ++LAQGERIE+RGFGSFSLHYRAPR 
Sbjct: 1  MTKSDLIEKLTNKHFQLSVREVEDSVKETLQLMTNSLAQGERIEVRGFGSFSLHYRAPRI 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANIY 93
          GRNPKTGDKVEL GKYVPHFKPGKELR+R NI+
Sbjct: 61 GRNPKTGDKVELGGKYVPHFKPGKELRERVNIH 93



>ref|YP_944313.1| integration host factor, beta subunit [Psychromonas ingrahamii
          37]
 gb|ABM04714.1| integration host factor, beta subunit [Psychromonas ingrahamii
          37]
          Length = 95

 Score =  141 bits (356), Expect = 9e-33
 Identities = 67/91 (73%), Positives = 78/91 (85%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKS+LIERL ++   +  K VED+VKE L  MA++LAQGERIE+RGFGSFSLHYRAPR 
Sbjct: 1  MTKSDLIERLTSKHFQLSVKEVEDSVKETLTLMANSLAQGERIEVRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTGD+VEL+GKYVPHFKPGK LR+R N
Sbjct: 61 GRNPKTGDRVELDGKYVPHFKPGKALRERVN 91



>ref|ZP_00419286.1| Integration host factor, beta subunit [Azotobacter vinelandii
          AvOP]
 gb|EAM04448.1| Integration host factor, beta subunit [Azotobacter vinelandii
          AvOP]
          Length = 92

 Score =  141 bits (356), Expect = 9e-33
 Identities = 68/91 (74%), Positives = 75/91 (82%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIER+ TQQ  + AK VE A+K MLE M+  LA G+RIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERIVTQQGQLSAKDVELAIKTMLEQMSQALATGDRIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG  V L+GK+VPHFKPGKELRDR N
Sbjct: 61 GRNPKTGQTVRLDGKFVPHFKPGKELRDRVN 91



>ref|ZP_01133912.1| putative integration host factor (iHF), beta subunit,
          site-specific recombination [Pseudoalteromonas tunicata
          D2]
 gb|EAR28104.1| putative integration host factor (iHF), beta subunit,
          site-specific recombination [Pseudoalteromonas tunicata
          D2]
          Length = 96

 Score =  141 bits (355), Expect = 1e-32
 Identities = 68/91 (74%), Positives = 78/91 (85%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIE+LA Q   + AK VE++VKE+LE MA +L++ +RIEIRGFGSFSLH+RAPR 
Sbjct: 1  MTKSELIEQLAEQHPQLSAKDVENSVKEILEQMADSLSESQRIEIRGFGSFSLHFRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTGD VEL GKYVPHFKPGKELRDR N
Sbjct: 61 GRNPKTGDTVELLGKYVPHFKPGKELRDRVN 91



>gb|EAH24755.1| unknown [environmental sequence]
          Length = 94

 Score =  140 bits (354), Expect = 2e-32
 Identities = 68/91 (74%), Positives = 75/91 (82%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIER+ TQQ  + +K VE A+K MLE MA  LA G+RIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERIVTQQGLLSSKDVELAIKTMLEQMAQALATGDRIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG  V L+GK+VPHFKPGKELRDR N
Sbjct: 61 GRNPKTGQSVSLDGKFVPHFKPGKELRDRVN 91



>gb|AAM27778.1|AF498415_2 HimD [Pseudomonas aeruginosa]
          Length = 93

 Score =  140 bits (354), Expect = 2e-32
 Identities = 67/91 (73%), Positives = 75/91 (82%)

Query: 1  MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT 60
          MTKSELIER+ T Q  + AK VE A+K MLE M+  LA G+RIEIRGFGSFSLHYRAPR 
Sbjct: 1  MTKSELIERIVTHQGQLSAKDVELAIKTMLEQMSQALATGDRIEIRGFGSFSLHYRAPRV 60

Query: 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRAN 91
          GRNPKTG+ V L+GK+VPHFKPGKELRDR N
Sbjct: 61 GRNPKTGESVRLDGKFVPHFKPGKELRDRVN 91



>ref|NP_251851.1| integration host factor beta subunit [Pseudomonas aeruginosa
          PAO1]
 ref|ZP_00968373.1| COG0776: Bacterial nucleoid DNA-binding protein [Pseudomonas
          aeruginosa C3719]
 ref|ZP_00974098.1| COG0776: Bacterial nucleoid DNA-binding protein [Pseudomonas
          aeruginosa 2192]
 ref|ZP_01293447.1| hypothetical protein PaerP_01004662 [Pseudomonas aeruginosa PA7]
 ref|ZP_01366609.1| hypothetical protein PaerPA_01003757 [Pseudomonas aeruginosa
          PACS2]
 ref|YP_790019.1| integration host factor beta subunit [Pseudomonas aeruginosa
          UCBPP-PA14]
 sp|Q51473|IHFB_PSEAE Integration host factor subunit beta (IHF-beta)
 gb|AAD45260.1|AF147795_1 integration host factor beta-subunit [Pseudomonas aeruginosa]
 gb|AAF72950.1|AF236052_1 integration host factor beta-subunit [Pseudomonas aeruginosa]
 gb|AAG06549.1|AE004740_2 integration host factor beta subunit [Pseudomonas aeruginosa
          PAO1]
 gb|AAM27536.1|AF498400_2 HimD [Pseudomonas aeruginosa]
 gb|AAM27554.1|AF49840