Score E
Sequences producing significant alignments: (bits) Value
ref|AP_003990.1| diaminopimelate epimerase [Escherichia col... 558 e-158
ref|NP_290438.1| diaminopimelate epimerase [Escherichia col... 558 e-158
gb|AAA67605.1| diaminopimelate epimerase [Escherichia coli] 556 e-157
ref|ZP_00697834.1| COG0253: Diaminopimelate epimerase [Shig... 556 e-157
ref|YP_691020.1| diaminopimelate epimerase [Shigella flexne... 556 e-157
ref|NP_709616.1| diaminopimelate epimerase [Shigella flexne... 556 e-157
ref|NP_756589.1| diaminopimelate epimerase [Escherichia col... 556 e-157
sp|Q8FBN6|DAPF_ECOL6 Diaminopimelate epimerase (DAP epimerase) 556 e-157
emb|CAA31413.1| unnamed protein product [Escherichia coli] 547 e-154
ref|NP_462832.1| diaminopimelate epimerase [Salmonella typh... 542 e-153
ref|NP_457804.1| diaminopimelate epimerase [Salmonella ente... 542 e-153
ref|ZP_01590960.1| diaminopimelate epimerase [Enterobacter ... 532 e-150
ref|ZP_01535620.1| diaminopimelate epimerase [Serratia prot... 505 e-142
ref|YP_001004580.1| diaminopimelate epimerase [Yersinia ent... 501 e-140
ref|ZP_00833972.1| COG0253: Diaminopimelate epimerase [Yers... 499 e-140
ref|ZP_00829175.1| COG0253: Diaminopimelate epimerase [Yers... 498 e-139
ref|YP_052270.1| diaminopimelate epimerase [Erwinia carotov... 497 e-139
ref|ZP_00821861.1| COG0253: Diaminopimelate epimerase [Yers... 493 e-138
ref|YP_456026.1| diaminopimelate epimerase [Sodalis glossin... 492 e-137
ref|ZP_00823809.1| COG0253: Diaminopimelate epimerase [Yers... 488 e-136
ref|NP_407293.1| diaminopimelate epimerase [Yersinia pestis... 485 e-135
ref|NP_931802.1| diaminopimelate epimerase [Photorhabdus lu... 468 e-130
ref|NP_438909.1| diaminopimelate epimerase [Haemophilus inf... 449 e-125
pdb|1BWZ|A Chain A, Diaminopimelate Epimerase From Hemophil... 446 e-124
ref|ZP_00135025.2| COG0253: Diaminopimelate epimerase [Acti... 444 e-123
ref|NP_229784.1| diaminopimelate epimerase [Vibrio cholerae... 443 e-123
ref|ZP_01677496.1| diaminopimelate epimerase [Vibrio choler... 443 e-123
ref|NP_246642.1| diaminopimelate epimerase [Pasteurella mul... 440 e-122
ref|ZP_00156607.2| COG0253: Diaminopimelate epimerase [Haem... 439 e-122
ref|YP_088976.1| diaminopimelate epimerase [Mannheimia succ... 439 e-122
ref|ZP_01482466.1| hypothetical protein VchoR_02001622 [Vib... 439 e-121
ref|ZP_00757472.1| COG0253: Diaminopimelate epimerase [Vibr... 437 e-121
ref|ZP_00131822.2| COG0253: Diaminopimelate epimerase [Haem... 437 e-121
ref|ZP_01261866.1| diaminopimelate epimerase [Vibrio algino... 436 e-121
ref|YP_719815.1| diaminopimelate epimerase [Haemophilus som... 436 e-121
ref|NP_799362.1| diaminopimelate epimerase [Vibrio parahaem... 436 e-121
ref|ZP_01485780.1| hypothetical protein VchoV5_02001611 [Vi... 435 e-120
ref|ZP_00154344.2| COG0253: Diaminopimelate epimerase [Haem... 435 e-120
ref|ZP_00992313.1| diaminopimelate epimerase [Vibrio splend... 434 e-120
ref|NP_932880.1| diaminopimelate epimerase [Vibrio vulnific... 433 e-120
ref|ZP_01066470.1| diaminopimelate epimerase [Vibrio sp. ME... 433 e-120
ref|ZP_01474765.1| hypothetical protein VEx2w_02002631 [Vib... 432 e-119
ref|NP_872655.1| diaminopimelate epimerase [Haemophilus duc... 428 e-118
ref|NP_760075.1| diaminopimelate epimerase [Vibrio vulnific... 427 e-118
ref|ZP_01222226.1| diaminopimelate epimerase [Photobacteriu... 424 e-117
ref|ZP_01236847.1| diaminopimelate epimerase [Vibrio angust... 421 e-116
ref|ZP_01160927.1| diaminopimelate epimerase [Photobacteriu... 419 e-115
ref|YP_131595.1| diaminopimelate epimerase [Photobacterium ... 418 e-115
ref|YP_205867.1| diaminopimelate epimerase [Vibrio fischeri... 417 e-115
gb|EAI61824.1| unknown [environmental sequence] 414 e-114
ref|YP_855007.1| diaminopimelate epimerase [Aeromonas hydro... 414 e-114
ref|ZP_00812694.1| Diaminopimelate epimerase [Shewanella pu... 402 e-110
ref|ZP_00580321.1| Diaminopimelate epimerase [Shewanella ba... 397 e-109
ref|ZP_01135907.1| diaminopimelate epimerase [Pseudoalterom... 395 e-109
ref|YP_732529.1| diaminopimelate epimerase [Shewanella sp. ... 395 e-108
gb|EAG70439.1| unknown [environmental sequence] 394 e-108
ref|YP_868040.1| diaminopimelate epimerase [Shewanella sp. ... 394 e-108
ref|ZP_00835796.1| Diaminopimelate epimerase [Shewanella sp... 394 e-108
gb|EAK69259.1| unknown [environmental sequence] 394 e-108
ref|NP_719833.1| diaminopimelate epimerase [Shewanella onei... 394 e-108
ref|YP_561409.1| Diaminopimelate epimerase [Shewanella deni... 393 e-108
ref|YP_588594.1| diaminopimelate epimerase [Baumannia cicad... 393 e-108
gb|EAI61961.1| unknown [environmental sequence] 392 e-107
ref|ZP_01612521.1| diaminopimelate epimerase [Alteromonadal... 392 e-107
gb|EAK41418.1| unknown [environmental sequence] 390 e-107
ref|YP_749145.1| Diaminopimelate epimerase [Shewanella frig... 390 e-107
ref|ZP_01108559.1| diaminopimelate epimerase [Alteromonas m... 390 e-107
ref|ZP_01602086.1| Diaminopimelate epimerase [Shewanella pe... 387 e-106
ref|YP_338644.1| diaminopimelate epimerase [Pseudoalteromon... 387 e-106
ref|YP_156936.1| diaminopimelate epimerase [Idiomarina loih... 386 e-106
ref|YP_929121.1| Diaminopimelate epimerase [Shewanella amaz... 385 e-105
ref|ZP_01539516.1| diaminopimelate epimerase [Shewanella wo... 382 e-105
ref|YP_663627.1| Diaminopimelate epimerase [Pseudoalteromon... 382 e-104
ref|YP_266845.1| diaminopimelate epimerase [Colwellia psych... 380 e-104
gb|EAK12579.1| unknown [environmental sequence] 379 e-104
gb|EAK19828.1| unknown [environmental sequence] 378 e-103
ref|ZP_01449358.1| diaminopimelate epimerase [alpha proteob... 377 e-103
ref|ZP_01042640.1| Diaminopimelate epimerase [Idiomarina ba... 375 e-102
ref|YP_941513.1| Diaminopimelate epimerase [Psychromonas in... 372 e-102
ref|ZP_01216921.1| diaminopimelate epimerase [Psychromonas ... 362 2e-98
gb|AAW92128.1| diaminopimelate epimerase [Enterobacter asbu... 353 4e-96
ref|NP_878854.1| diaminopimelate epimerase [Candidatus Bloc... 353 5e-96
ref|YP_278082.1| diaminopimelate epimerase [Candidatus Bloc... 351 3e-95
ref|YP_957783.1| Diaminopimelate epimerase [Marinobacter aq... 337 3e-91
ref|YP_544308.1| Diaminopimelate epimerase [Methylobacillus... 335 2e-90
ref|ZP_01525327.1| diaminopimelate epimerase [Pseudomonas m... 335 2e-90
ref|YP_431635.1| diaminopimelate epimerase [Hahella chejuen... 333 4e-90
gb|ABC25246.1| diaminopimelate epimerase [uncultured marine... 327 4e-88
gb|EAG69978.1| unknown [environmental sequence] 327 5e-88
gb|AAC44326.1| diaminopimelate epimerase 327 5e-88
ref|ZP_01164869.1| diaminopimelate epimerase [Oceanospirill... 325 1e-87
ref|YP_575156.1| Diaminopimelate epimerase [Chromohalobacte... 325 2e-87
ref|ZP_00899586.1| Diaminopimelate epimerase [Pseudomonas p... 325 2e-87
ref|ZP_01297566.1| hypothetical protein PaerP_01000528 [Pse... 324 4e-87
ref|YP_694052.1| diaminopimelate epimerase [Alcanivorax bor... 323 5e-87
gb|AAT51031.1| PA5278 [synthetic construct] 323 5e-87
ref|ZP_00417075.1| Diaminopimelate epimerase [Azotobacter v... 323 5e-87
ref|NP_253965.1| diaminopimelate epimerase [Pseudomonas aer... 323 5e-87
ref|NP_747329.1| diaminopimelate epimerase [Pseudomonas put... 323 8e-87
sp|Q88CF3|DAPF_PSEPK Diaminopimelate epimerase (DAP epimerase) 323 8e-87
ref|NP_790075.1| diaminopimelate epimerase [Pseudomonas syr... 323 8e-87
ref|ZP_01615663.1| diaminopimelate epimerase [marine gamma ... 321 2e-86
ref|YP_113353.1| diaminopimelate epimerase [Methylococcus c... 320 5e-86
ref|ZP_01597510.1| Diaminopimelate epimerase [Marinomonas s... 318 3e-85
ref|ZP_01112788.1| diaminopimelate epimerase [Reinekea sp. ... 318 3e-85
ref|ZP_01273191.1| Diaminopimelate epimerase [Psychrobacter... 317 6e-85
ref|YP_277092.1| diaminopimelate epimerase [Pseudomonas syr... 317 6e-85
ref|YP_263071.1| diaminopimelate epimerase [Pseudomonas flu... 317 6e-85
sp|O05322|DAPF_PSEFL Diaminopimelate epimerase (DAP epimera... 316 1e-84
ref|YP_932098.1| DapF protein [Azoarcus sp. BH72] >gi|11966... 315 2e-84
ref|YP_351227.1| diaminopimelate epimerase [Pseudomonas flu... 315 2e-84
ref|YP_233294.1| diaminopimelate epimerase [Pseudomonas syr... 315 2e-84
ref|ZP_01637674.1| Diaminopimelate epimerase [Pseudomonas p... 315 2e-84
ref|YP_610766.1| diaminopimelate epimerase [Pseudomonas ent... 314 3e-84
ref|ZP_01306407.1| diaminopimelate epimerase [Oceanobacter ... 313 5e-84
ref|YP_263507.1| probable diaminopimelate epimerase [Psychr... 313 8e-84
ref|YP_579488.1| Diaminopimelate epimerase [Psychrobacter c... 312 1e-83
ref|NP_902198.1| diaminopimelate epimerase [Chromobacterium... 311 2e-83
ref|YP_413223.1| diaminopimelate epimerase [Nitrosospira mu... 310 4e-83
ref|YP_316284.1| diaminopimelate epimerase [Thiobacillus de... 310 5e-83
ref|NP_841651.1| Diaminopimelate epimerase [Nitrosomonas eu... 310 5e-83
ref|ZP_01224101.1| diaminopimelate epimerase [marine gamma ... 310 7e-83
ref|YP_047237.1| diaminopimelate epimerase [Acinetobacter s... 309 1e-82
ref|YP_525713.1| Diaminopimelate epimerase [Saccharophagus ... 308 2e-82
ref|YP_746746.1| Diaminopimelate epimerase [Nitrosomonas eu... 306 6e-82
ref|YP_283421.1| Diaminopimelate epimerase [Dechloromonas a... 306 8e-82
ref|YP_159263.1| diaminopimelate epimerase [Azoarcus sp. Eb... 306 1e-81
ref|ZP_01128300.1| Diaminopimelate epimerase [Nitrococcus m... 305 2e-81
ref|YP_342374.1| Diaminopimelate epimerase [Nitrosococcus o... 303 6e-81
ref|NP_240392.2| diaminopimelate epimerase [Buchnera aphidi... 300 5e-80
pir||F84998 diaminopimelate epimerase (EC 5.1.1.7) [importe... 300 5e-80
ref|YP_724747.1| diaminopimelate epimerase [Ralstonia eutro... 300 7e-80
ref|ZP_01625795.1| Diaminopimelate epimerase [marine gamma ... 298 2e-79
ref|YP_390675.1| diaminopimelate epimerase [Thiomicrospira ... 298 3e-79
ref|ZP_01077222.1| diaminopimelate epimerase [Marinomonas s... 294 3e-78
ref|YP_740908.1| Diaminopimelate epimerase [Alkalilimnicola... 294 4e-78
sp|Q8K901|DAPF_BUCAP Diaminopimelate epimerase (DAP epimera... 291 2e-77
ref|ZP_01103207.1| Diaminopimelate epimerase [gamma proteob... 291 3e-77
ref|YP_556679.1| Diaminopimelate epimerase [Burkholderia xe... 288 2e-76
ref|YP_294424.1| diaminopimelate epimerase [Ralstonia eutro... 288 2e-76
ref|NP_660893.2| diaminopimelate epimerase [Buchnera aphidi... 286 1e-75
ref|NP_518258.1| diaminopimelate epimerase [Ralstonia solan... 286 1e-75
gb|EAX33603.1| diaminopimelate epimerase [Coxiella burnetii... 285 2e-75
ref|NP_820945.1| diaminopimelate epimerase [Coxiella burnet... 285 2e-75
ref|ZP_00943025.1| Diaminopimelate epimerase [Ralstonia sol... 284 4e-75
ref|ZP_01662002.1| Diaminopimelate epimerase [Ralstonia pic... 283 5e-75
ref|YP_582308.1| diaminopimelate epimerase [Ralstonia metal... 282 1e-74
ref|ZP_01510899.1| diaminopimelate epimerase [Burkholderia ... 282 2e-74
ref|NP_273802.1| diaminopimelate epimerase [Neisseria menin... 282 2e-74
ref|NP_283751.1| diaminopimelate epimerase [Neisseria menin... 281 2e-74
ref|YP_974802.1| putative diaminopimelate epimerase [Neisse... 281 3e-74
ref|ZP_01499784.1| diaminopimelate epimerase [Burkholderia ... 280 6e-74
gb|EAF02891.1| unknown [environmental sequence] 280 8e-74
ref|YP_207495.1| DapF [Neisseria gonorrhoeae FA 1090] >gi|5... 277 4e-73
ref|NP_778130.1| diaminopimelate epimerase [Buchnera aphidi... 276 1e-72
ref|YP_524684.1| Diaminopimelate epimerase [Rhodoferax ferr... 275 1e-72
emb|CAJ47761.1| diaminopimelate epimerase [Bordetella avium... 275 2e-72
ref|NP_882550.1| diaminopimelate epimerase [Bordetella para... 273 5e-72
ref|NP_881645.1| diaminopimelate epimerase [Bordetella pert... 273 9e-72
ref|YP_987875.1| Diaminopimelate epimerase [Acidovorax sp. ... 271 2e-71
gb|AAT42404.1| diaminopimelate epimerase [Collimonas fungiv... 271 3e-71
ref|YP_001002777.1| Diaminopimelate epimerase [Halorhodospi... 270 6e-71
ref|YP_969171.1| Diaminopimelate epimerase [Acidovorax aven... 269 1e-70
ref|YP_125773.1| Diaminopimelate epimerase [Legionella pneu... 269 1e-70
ref|YP_094410.1| diaminopimelate epimerase [Legionella pneu... 268 3e-70
ref|YP_122771.1| Diaminopimelate epimerase [Legionella pneu... 266 7e-70
ref|ZP_01317616.1| hypothetical protein Bpse1_03002959 [Bur... 266 1e-69
ref|ZP_00486757.1| COG0253: Diaminopimelate epimerase [Burk... 265 2e-69
ref|ZP_01320939.1| hypothetical protein BpseP_03005313 [Bur... 265 3e-69
ref|YP_106838.1| diaminopimelate epimerase [Burkholderia ps... 264 3e-69
ref|YP_104734.1| diaminopimelate epimerase [Burkholderia ma... 264 3e-69
ref|ZP_00421999.1| Diaminopimelate epimerase [Burkholderia ... 263 6e-69
ref|YP_440730.1| diaminopimelate epimerase [Burkholderia th... 263 7e-69
ref|ZP_01332600.1| hypothetical protein Bpse4_03004918 [Bur... 262 2e-68
ref|YP_001022433.1| Diaminopimelate epimerase [Methylibium ... 262 2e-68
ref|ZP_01558720.1| Diaminopimelate epimerase [Burkholderia ... 261 3e-68
ref|YP_775021.1| Diaminopimelate epimerase [Burkholderia ce... 261 3e-68
ref|ZP_01573042.1| Diaminopimelate epimerase [Burkholderia ... 260 6e-68
ref|YP_547908.1| Diaminopimelate epimerase [Polaromonas sp.... 260 6e-68
ref|ZP_01579020.1| Diaminopimelate epimerase [Delftia acido... 258 2e-67
ref|ZP_01562655.1| Diaminopimelate epimerase [Burkholderia ... 258 2e-67
ref|ZP_00980955.1| COG0253: Diaminopimelate epimerase [Burk... 258 3e-67
ref|YP_903773.1| Diaminopimelate epimerase [Candidatus Ruth... 257 4e-67
gb|EAK69533.1| unknown [environmental sequence] 257 5e-67
ref|YP_370673.1| diaminopimelate epimerase [Burkholderia sp... 257 5e-67
ref|YP_622343.1| Diaminopimelate epimerase [Burkholderia ce... 256 1e-66
ref|YP_983653.1| Diaminopimelate epimerase [Polaromonas nap... 255 2e-66
ref|ZP_00987793.1| COG0253: Diaminopimelate epimerase [Burk... 254 3e-66
ref|ZP_01518011.1| diaminopimelate epimerase [Comamonas tes... 254 4e-66
ref|ZP_01494392.1| Diaminopimelate epimerase [Polynucleobac... 250 5e-65
gb|EAG84995.1| unknown [environmental sequence] 247 4e-64
gb|EAD91646.1| unknown [environmental sequence] 247 5e-64
gb|EAE90154.1| unknown [environmental sequence] 241 3e-62
ref|YP_802923.1| DapF [Buchnera aphidicola str. Cc (Cinara ... 241 4e-62
gb|AAW72674.1| diaminopimelate epimerase [Buchnera aphidico... 240 5e-62
gb|EAB20926.1| unknown [environmental sequence] 239 1e-61
ref|ZP_01645651.1| Diaminopimelate epimerase [Stenotrophomo... 236 1e-60
ref|ZP_00651038.1| Diaminopimelate epimerase [Xylella fasti... 234 5e-60
ref|NP_638845.1| diaminopimelate epimerase [Xanthomonas cam... 232 1e-59
ref|NP_778920.1| diaminopimelate epimerase [Xylella fastidi... 232 2e-59
ref|ZP_00679888.1| Diaminopimelate epimerase [Xylella fasti... 232 2e-59
sp|Q87DI4|DAPF_XYLFT Diaminopimelate epimerase (DAP epimerase) 231 4e-59
ref|NP_298770.1| diaminopimelate epimerase [Xylella fastidi... 230 5e-59
ref|YP_362420.1| diaminopimelate epimerase [Xanthomonas cam... 229 2e-58
sp|Q8PPQ1|DAPF_XANAC Diaminopimelate epimerase (DAP epimerase) 228 2e-58
ref|ZP_01300202.1| hypothetical protein Rgryl_01000823 [Ric... 226 1e-57
ref|ZP_00510406.1| Diaminopimelate epimerase [Clostridium t... 223 8e-57
ref|NP_640987.1| diaminopimelate epimerase [Xanthomonas axo... 223 1e-56
ref|ZP_00514083.1| Diaminopimelate epimerase [Crocosphaera ... 222 1e-56
ref|ZP_01551449.1| diaminopimelate epimerase [Methylophilal... 222 2e-56
ref|ZP_01188380.1| Diaminopimelate epimerase [Halothermothr... 219 9e-56
ref|YP_429748.1| diaminopimelate epimerase [Moorella thermo... 219 2e-55
ref|NP_988037.1| Diaminopimelate epimerase [Methanococcus m... 216 1e-54
dbj|GAA02047.1| unnamed protein product [Pelotomaculum ther... 216 1e-54
gb|EAI16547.1| unknown [environmental sequence] 215 2e-54
ref|ZP_01654814.1| Diaminopimelate epimerase [Methanococcus... 215 2e-54
gb|EAY49929.1| Diaminopimelate epimerase [Methanococcus van... 214 3e-54
ref|YP_202636.1| hypothetical protein XOO3997 [Xanthomonas ... 214 3e-54
ref|YP_452796.1| diaminopimelate epimerase [Xanthomonas ory... 214 3e-54
ref|ZP_01142487.1| Diaminopimelate epimerase [Geobacter ura... 212 2e-53
ref|ZP_00112068.1| COG0253: Diaminopimelate epimerase [Nost... 211 3e-53
ref|NP_951589.1| diaminopimelate epimerase [Geobacter sulfu... 211 4e-53
gb|EAF10838.1| unknown [environmental sequence] 210 6e-53
ref|ZP_01592401.1| Diaminopimelate epimerase [Geobacter lov... 210 6e-53
ref|ZP_01389771.1| diaminopimelate epimerase [Geobacter sp.... 210 7e-53
ref|ZP_01302106.1| diaminopimelate epimerase [Sphingomonas ... 209 1e-52
ref|ZP_01630111.1| diaminopimelate epimerase [Nodularia spu... 209 1e-52
ref|YP_323592.1| diaminopimelate epimerase [Anabaena variab... 209 1e-52
ref|YP_385932.1| Diaminopimelate epimerase [Geobacter metal... 209 2e-52
sp|Q8YVD0|DAPF2_ANASP Diaminopimelate epimerase 2 (DAP epim... 207 4e-52
ref|ZP_01085502.1| diaminopimelate epimerase [Synechococcus... 207 4e-52
ref|ZP_01124065.1| diaminopimelate epimerase [Synechococcus... 206 8e-52
ref|NP_442973.1| diaminopimelate epimerase [Synechocystis s... 206 1e-51
ref|YP_903064.1| Diaminopimelate epimerase [Pelobacter prop... 205 2e-51
ref|YP_799268.1| Diaminopimelate epimerase [Leptospira borg... 204 3e-51
ref|YP_172877.1| diaminopimelate epimerase [Synechococcus e... 204 3e-51
ref|YP_000074.1| diaminopimelate epimerase [Leptospira inte... 204 5e-51
ref|NP_190926.1| diaminopimelate epimerase [Arabidopsis tha... 204 5e-51
ref|NP_001067060.1| Os12g0567200 [Oryza sativa (japonica cu... 203 9e-51
ref|ZP_01665539.1| Diaminopimelate epimerase [Thermosinus c... 201 4e-50
ref|NP_710264.1| diaminopimelate epimerase [Leptospira inte... 201 4e-50
ref|ZP_01618794.1| diaminopimelate epimerase [Lyngbya sp. P... 200 8e-50
ref|YP_721006.1| Diaminopimelate epimerase [Trichodesmium e... 200 8e-50
ref|YP_518976.1| hypothetical protein DSY2743 [Desulfitobac... 199 1e-49
ref|YP_508260.1| Diaminopimelate epimerase [Jannaschia sp. ... 199 1e-49
ref|YP_191858.1| Diaminopimelate epimerase [Gluconobacter o... 199 1e-49
ref|ZP_01583670.1| Diaminopimelate epimerase [Dinoroseobact... 199 2e-49
ref|YP_360325.1| diaminopimelate epimerase [Carboxydothermu... 199 2e-49
ref|YP_074063.1| diaminopimelate epimerase [Symbiobacterium... 198 3e-49
ref|ZP_01369748.1| diaminopimelate epimerase [Desulfitobact... 198 3e-49
ref|NP_897347.1| diaminopimelate epimerase [Synechococcus s... 197 5e-49
gb|EAI29276.1| unknown [environmental sequence] 196 8e-49
ref|ZP_01610677.1| Diaminopimelate epimerase [Sphingomonas ... 196 1e-48
ref|YP_358479.1| diaminopimelate epimerase [Pelobacter carb... 196 1e-48
ref|ZP_01447537.1| diaminopimelate epimerase [alpha proteob... 196 1e-48
ref|YP_477607.1| diaminopimelate epimerase [Synechococcus s... 195 2e-48
ref|YP_148810.1| diaminopimelate epimerase [Geobacillus kau... 195 2e-48
sp|O27389|DAPF_METTH Diaminopimelate epimerase (DAP epimerase) 194 3e-48
ref|NP_276451.1| diaminopimelate epimerase [Methanothermoba... 194 3e-48
ref|YP_730575.1| diaminopimelate epimerase [Synechococcus s... 194 4e-48
ref|ZP_01148035.1| Diaminopimelate epimerase [Desulfotomacu... 194 4e-48
ref|NP_683084.1| diaminopimelate epimerase [Thermosynechoco... 194 5e-48
ref|YP_474764.1| diaminopimelate epimerase [Synechococcus s... 192 1e-47
ref|ZP_01002347.1| diaminopimelate epimerase [Loktanella ve... 192 2e-47
ref|ZP_01353657.1| diaminopimelate epimerase [Clostridium p... 192 2e-47
ref|ZP_01035169.1| diaminopimelate epimerase [Roseovarius s... 192 2e-47
ref|ZP_01311223.1| Diaminopimelate epimerase [Desulfuromona... 192 2e-47
ref|YP_614803.1| Diaminopimelate epimerase [Silicibacter sp... 191 3e-47
ref|ZP_01080310.1| diaminopimelate epimerase [Synechococcus... 191 3e-47
ref|ZP_00884622.1| Diaminopimelate epimerase [Caldicellulos... 191 3e-47
ref|NP_923761.1| diaminopimelate epimerase [Gloeobacter vio... 191 4e-47
ref|ZP_01445675.1| diaminopimelate epimerase [Roseovarius s... 191 5e-47
ref|ZP_00630301.1| Diaminopimelate epimerase [Paracoccus de... 191 5e-47
ref|YP_681176.1| diaminopimelate epimerase [Roseobacter den... 189 1e-46
gb|ABG22051.1| Diaminopimelate epimerase, putative, express... 189 1e-46
ref|YP_617768.1| Diaminopimelate epimerase [Sphingopyxis al... 189 1e-46
ref|ZP_01055466.1| diaminopimelate epimerase [Roseobacter s... 188 3e-46
emb|CAL52512.1| unnamed protein product [Ostreococcus tauri] 187 4e-46
gb|EAJ80487.1| unknown [environmental sequence] 187 5e-46
ref|ZP_01472106.1| diaminopimelate epimerase [Synechococcus... 187 5e-46
ref|ZP_00914345.1| Diaminopimelate epimerase [Rhodobacter s... 187 7e-46
ref|YP_745321.1| diaminopimelate epimerase [Granulibacter b... 186 9e-46
ref|NP_623127.1| Diaminopimelate epimerase [Thermoanaerobac... 186 1e-45
ref|ZP_01154789.1| diaminopimelate epimerase [Oceanicola gr... 186 1e-45
ref|NP_244279.1| diaminopimelate epimerase [Bacillus halodu... 186 1e-45
ref|ZP_01089910.1| diaminopimelate epimerase [Blastopirellu... 186 1e-45
ref|ZP_00954606.1| diaminopimelate epimerase [Sulfitobacter... 186 1e-45
ref|ZP_01657139.1| Diaminopimelate epimerase [Parvibaculum ... 185 2e-45
ref|NP_871273.1| hypothetical protein WGLp270 [Wigglesworth... 185 2e-45
ref|YP_001017513.1| Diaminopimelate epimerase [Prochlorococ... 185 3e-45
ref|XP_001016323.1| diaminopimelate epimerase family protei... 185 3e-45
ref|YP_162807.1| diaminopimelate epimerase [Zymomonas mobil... 185 3e-45
ref|NP_486088.1| diaminopimelate epimerase [Nostoc sp. PCC ... 185 3e-45
ref|ZP_00961921.1| diaminopimelate epimerase [Sulfitobacter... 184 3e-45
ref|NP_894548.1| Diaminopimelate epimerase [Prochlorococcus... 184 4e-45
gb|AAW57080.1| diaminopimelate epimerase 2 [cyanobacterium ... 184 6e-45
ref|YP_165542.1| diaminopimelate epimerase [Silicibacter po... 184 6e-45
gb|EAG68474.1| unknown [environmental sequence] 183 1e-44
gb|EAB44406.1| unknown [environmental sequence] 182 1e-44
ref|ZP_01039216.1| diaminopimelate epimerase [Erythrobacter... 182 2e-44
gb|EAJ47816.1| unknown [environmental sequence] 182 2e-44
ref|NP_809461.1| diaminopimelate epimerase [Bacteroides the... 182 2e-44
ref|YP_377115.1| Diaminopimelate epimerase [Synechococcus s... 181 3e-44
ref|NP_875340.1| Diaminopimelate epimerase [Prochlorococcus... 181 5e-44
ref|YP_176429.1| diaminopimelate epimerase [Bacillus clausi... 181 5e-44
ref|ZP_00958700.1| diaminopimelate epimerase [Roseovarius n... 181 5e-44
ref|YP_496680.1| Diaminopimelate epimerase [Novosphingobium... 180 6e-44
ref|YP_212285.1| diaminopimelate epimerase [Bacteroides fra... 180 6e-44
ref|YP_099926.1| diaminopimelate epimerase [Bacteroides fra... 180 6e-44
ref|YP_457672.1| diaminopimelate epimerase [Erythrobacter l... 180 8e-44
ref|NP_693275.1| diaminopimelate epimerase [Oceanobacillus ... 180 8e-44
ref|ZP_00779460.1| Diaminopimelate epimerase [Thermoanaerob... 180 8e-44
ref|YP_426271.1| Diaminopimelate epimerase [Rhodospirillum ... 179 1e-43
gb|EAH44450.1| unknown [environmental sequence] 179 2e-43
ref|YP_381680.1| diaminopimelate epimerase [Synechococcus s... 179 2e-43
ref|YP_354019.1| Diaminopimelate epimerase [Rhodobacter sph... 179 2e-43
emb|CAJ72320.1| similar to diaminopimelate epimerase [Candi... 178 2e-43
ref|YP_001011284.1| Diaminopimelate epimerase [Prochlorococ... 178 3e-43
ref|ZP_01467817.1| Diaminopimelate epimerase [Synechococcus... 178 3e-43
ref|ZP_00683297.1| Diaminopimelate epimerase [Xylella fasti... 178 3e-43
ref|YP_419578.1| Diaminopimelate epimerase [Magnetospirillu... 177 4e-43
ref|ZP_01045437.1| diaminopimelate epimerase [Nitrobacter s... 177 5e-43
ref|YP_001014818.1| Diaminopimelate epimerase [Prochlorococ... 176 9e-43
ref|YP_181475.1| diaminopimelate epimerase [Dehalococcoides... 176 9e-43
ref|YP_319381.1| diaminopimelate epimerase [Nitrobacter win... 176 9e-43
ref|ZP_01417760.1| diaminopimelate epimerase [Caulobacter s... 176 1e-42
ref|YP_291517.1| diaminopimelate epimerase [Prochlorococcus... 176 1e-42
ref|NP_422480.1| diaminopimelate epimerase [Caulobacter cre... 176 1e-42
ref|NP_767117.1| diaminopimelate epimerase [Bradyrhizobium ... 176 2e-42
ref|NP_981367.1| diaminopimelate epimerase [Bacillus cereus... 175 2e-42
ref|NP_834608.1| diaminopimelate epimerase [Bacillus cereus... 175 2e-42
dbj|BAF34654.1| diaminopimelate epimerase [Bacillus cereus] 175 3e-42
ref|ZP_01184653.1| Diaminopimelate epimerase [Bacillus weih... 174 3e-42
ref|YP_567653.1| Diaminopimelate epimerase [Rhodopseudomona... 174 3e-42
ref|YP_642887.1| Diaminopimelate epimerase [Rubrobacter xyl... 174 3e-42
gb|EAI70864.1| unknown [environmental sequence] 174 4e-42
ref|YP_038958.1| diaminopimelate epimerase [Bacillus thurin... 174 4e-42
ref|ZP_01178974.1| Diaminopimelate epimerase [Bacillus cere... 174 4e-42
gb|EAF28228.1| unknown [environmental sequence] 174 6e-42
ref|NP_847354.1| diaminopimelate epimerase [Bacillus anthra... 174 6e-42
ref|YP_530109.1| Diaminopimelate epimerase [Rhodopseudomona... 174 6e-42
ref|NP_391097.1| diaminopimelate epimerase [Bacillus subtil... 173 8e-42
ref|ZP_01005408.1| Diaminopimelate epimerase [Prochlorococc... 173 8e-42
ref|ZP_01001556.1| Diaminopimelate epimerase [Oceanicola ba... 173 8e-42
ref|YP_867630.1| Diaminopimelate epimerase [Magnetococcus s... 172 1e-41
ref|ZP_00055285.1| COG0253: Diaminopimelate epimerase [Magn... 172 1e-41
gb|EAH84889.1| unknown [environmental sequence] 172 2e-41
ref|ZP_01361870.1| Diaminopimelate epimerase [Clostridium s... 172 2e-41
gb|EAI70874.1| unknown [environmental sequence] 171 3e-41
ref|YP_307792.1| diaminopimelate epimerase [Dehalococcoides... 171 3e-41
ref|ZP_00739039.1| Diaminopimelate epimerase [Bacillus thur... 171 3e-41
ref|YP_897177.1| diaminopimelate epimerase [Bacillus thurin... 171 4e-41
gb|EAF26866.1| unknown [environmental sequence] 171 5e-41
ref|YP_080498.1| diaminopimelate epimerase [Bacillus lichen... 171 5e-41
gb|EAI58174.1| unknown [environmental sequence] 170 8e-41
gb|EAB14914.1| unknown [environmental sequence] 169 1e-40
ref|ZP_01548727.1| diaminopimelate epimerase [Stappia aggre... 169 1e-40
ref|ZP_00978026.1| COG0253: Diaminopimelate epimerase [Burk... 169 1e-40
ref|ZP_00389887.1| COG0253: Diaminopimelate epimerase [Baci... 169 1e-40
ref|NP_893006.1| Diaminopimelate epimerase [Prochlorococcus... 169 2e-40
ref|ZP_00800827.1| Diaminopimelate epimerase [Alkaliphilus ... 169 2e-40
ref|YP_578764.1| Diaminopimelate epimerase [Nitrobacter ham... 168 2e-40
gb|EAJ95796.1| unknown [environmental sequence] 167 4e-40
ref|ZP_01199201.1| Diaminopimelate epimerase [Xanthobacter ... 167 7e-40
gb|EAF60712.1| unknown [environmental sequence] 166 9e-40
ref|NP_539051.1| diaminopimelate epimerase [Brucella melite... 166 9e-40
ref|NP_698909.1| diaminopimelate epimerase [Brucella suis 1... 166 9e-40
gb|EAG16301.1| unknown [environmental sequence] 166 1e-39
ref|YP_001009364.1| Diaminopimelate epimerase [Prochlorococ... 166 1e-39
gb|EAK62529.1| unknown [environmental sequence] 166 2e-39
gb|EAJ52821.1| unknown [environmental sequence] 166 2e-39
gb|EAJ40726.1| unknown [environmental sequence] 165 2e-39
ref|ZP_01438230.1| diaminopimelate epimerase [Fulvimarina p... 165 2e-39
ref|YP_397408.1| diaminopimelate epimerase [Prochlorococcus... 165 2e-39
gb|EAH29862.1| unknown [environmental sequence] 164 4e-39
gb|EAD86936.1| unknown [environmental sequence] 164 4e-39
ref|ZP_01229027.1| diaminopimelate epimerase [Aurantimonas ... 164 4e-39
ref|ZP_01354200.1| diaminopimelate epimerase [Clostridium p... 164 5e-39
ref|YP_462170.1| diaminopimelate epimerase [Syntrophus acid... 164 6e-39
ref|NP_945603.1| diaminopimelate epimerase [Rhodopseudomona... 164 6e-39
ref|NP_248111.1| diaminopimelate epimerase (dapF) [Methanoc... 164 6e-39
ref|ZP_00858985.1| Diaminopimelate epimerase [Bradyrhizobiu... 164 6e-39
ref|YP_625107.1| Diaminopimelate epimerase [Burkholderia ce... 162 2e-38
gb|EAD50264.1| unknown [environmental sequence] 162 2e-38
ref|YP_032862.1| Diaminopimelate epimerase [Bartonella quin... 162 2e-38
gb|EAE38197.1| unknown [environmental sequence] 161 3e-38
ref|YP_483981.1| diaminopimelate epimerase [Rhodopseudomona... 161 3e-38
ref|ZP_01675201.1| Diaminopimelate epimerase [Candidatus De... 161 4e-38
ref|YP_762200.1| diaminopimelate epimerase [Hyphomonas nept... 161 4e-38
ref|ZP_01565794.1| Diaminopimelate epimerase [Burkholderia ... 160 5e-38
gb|EAI44571.1| unknown [environmental sequence] 160 9e-38
gb|EAI43360.1| unknown [environmental sequence] 160 9e-38
ref|YP_370856.1| Diaminopimelate epimerase [Burkholderia sp... 159 1e-37
ref|ZP_00917518.1| Diaminopimelate epimerase [Rhodobacter s... 159 1e-37
gb|EAH98811.1| unknown [environmental sequence] 159 1e-37
ref|YP_196897.1| Diaminopimelate epimerase [Ehrlichia rumin... 159 1e-37
ref|YP_179900.1| diaminopimelate epimerase [Ehrlichia rumin... 159 1e-37
gb|EAK56251.1| unknown [environmental sequence] 158 3e-37
ref|YP_195947.1| Diaminopimelate epimerase [Ehrlichia rumin... 158 3e-37
ref|YP_878028.1| diaminopimelate epimerase [Clostridium nov... 158 3e-37
gb|EAD15607.1| unknown [environmental sequence] 157 4e-37
gb|EAJ30897.1| unknown [environmental sequence] 157 6e-37
gb|EAE99248.1| unknown [environmental sequence] 157 6e-37
ref|YP_322629.1| diaminopimelate epimerase [Anabaena variab... 157 6e-37
ref|YP_988358.1| diaminopimelate epimerase [Bartonella baci... 157 7e-37
ref|YP_506881.1| diaminopimelate epimerase [Ehrlichia chaff... 157 7e-37
ref|YP_302675.1| Diaminopimelate epimerase [Ehrlichia canis... 157 7e-37
ref|YP_675927.1| diaminopimelate epimerase [Mesorhizobium s... 157 7e-37
ref|NP_488881.1| diaminopimelate epimerase [Nostoc sp. PCC ... 156 1e-36
ref|YP_779260.1| Diaminopimelate epimerase [Rhodopseudomona... 156 1e-36
gb|EAH99386.1| unknown [environmental sequence] 156 1e-36
ref|ZP_00544937.1| Diaminopimelate epimerase [Ehrlichia cha... 155 2e-36
gb|EAI56925.1| unknown [environmental sequence] 155 2e-36
gb|EAH99995.1| unknown [environmental sequence] 155 2e-36
gb|EAD48422.1| unknown [environmental sequence] 155 2e-36
gb|EAC36407.1| unknown [environmental sequence] 155 2e-36
ref|YP_259646.1| diaminopimelate epimerase [Pseudomonas flu... 155 2e-36
ref|YP_034350.1| Diaminopimelate epimerase [Bartonella hens... 155 2e-36
ref|ZP_00237689.1| diaminopimelate epimerase [Bacillus cere... 155 2e-36
gb|EAB72367.1| unknown [environmental sequence] 155 3e-36
gb|EAH81943.1| unknown [environmental sequence] 154 4e-36
gb|EAD20118.1| unknown [environmental sequence] 154 5e-36
ref|YP_699129.1| diaminopimelate epimerase [Clostridium per... 154 5e-36
ref|YP_696529.1| diaminopimelate epimerase [Clostridium per... 154 6e-36
ref|YP_448588.1| DapF [Methanosphaera stadtmanae DSM 3091] ... 154 6e-36
ref|NP_562762.1| diaminopimelate epimerase [Clostridium per... 154 6e-36
sp|Q92L46|DAPF_RHIME Diaminopimelate epimerase (DAP epimerase) 154 6e-36
ref|NP_387345.1| diaminopimelate epimerase [Sinorhizobium m... 154 6e-36
gb|EAC11100.1| unknown [environmental sequence] 153 8e-36
ref|ZP_00957275.1| diaminopimelate epimerase [Oceanicaulis ... 153 8e-36
ref|YP_755253.1| Diaminopimelate epimerase [Maricaulis mari... 153 1e-35
gb|EAK21047.1| unknown [environmental sequence] 152 2e-35
pir||S52295 diaminopimelate epimerase (EC 5.1.1.7) - Anabae... 152 2e-35
gb|EAJ53151.1| unknown [environmental sequence] 152 2e-35
gb|EAH98066.1| unknown [environmental sequence] 152 2e-35
gb|EAD64853.1| unknown [environmental sequence] 152 2e-35
ref|ZP_01595634.1| Diaminopimelate epimerase [Marinomonas s... 152 2e-35
gb|EAI29706.1| unknown [environmental sequence] 151 3e-35
gb|EAK08311.1| unknown [environmental sequence] 150 5e-35
gb|EAB95039.1| unknown [environmental sequence] 150 5e-35
gb|EAE47134.1| unknown [environmental sequence] 150 5e-35
gb|EAK67671.1| unknown [environmental sequence] 150 7e-35
ref|ZP_01016680.1| diaminopimelate epimerase [Parvularcula ... 149 1e-34
gb|EAC16415.1| unknown [environmental sequence] 149 2e-34
emb|CAJ69480.1| diaminopimelate epimerase [Clostridium diff... 149 2e-34
ref|ZP_01413830.1| Diaminopimelate epimerase [Sinorhizobium... 149 2e-34
gb|EAJ52381.1| unknown [environmental sequence] 149 2e-34
gb|EAJ41479.1| unknown [environmental sequence] 149 2e-34
ref|ZP_01634351.1| hypothetical protein CdifQ_03003035 [Clo... 149 2e-34
emb|CAJ37127.1| diaminopimelate epimerase [uncultured metha... 148 3e-34
gb|EAJ68504.1| unknown [environmental sequence] 147 4e-34
gb|EAJ28082.1| unknown [environmental sequence] 147 6e-34
gb|EAG91039.1| unknown [environmental sequence] 147 6e-34
gb|EAE62623.1| unknown [environmental sequence] 147 6e-34
emb|CAA55224.1| dapF [Pseudomonas aeruginosa] 147 6e-34
gb|EAK26644.1| unknown [environmental sequence] 147 8e-34
gb|EAG64739.1| unknown [environmental sequence] 147 8e-34
ref|NP_824337.1| diaminopimelate epimerase [Streptomyces av... 147 8e-34
gb|EAJ82214.1| unknown [environmental sequence] 146 1e-33
gb|EAI12259.1| unknown [environmental sequence] 146 1e-33
ref|YP_999269.1| Diaminopimelate epimerase [Verminephrobact... 146 1e-33
gb|EAK51234.1| unknown [environmental sequence] 146 1e-33
gb|EAJ28680.1| unknown [environmental sequence] 146 1e-33
gb|EAK58079.1| unknown [environmental sequence] 145 2e-33
ref|NP_069581.1| diaminopimelate epimerase (dapF) [Archaeog... 145 2e-33
gb|EAI55167.1| unknown [environmental sequence] 145 2e-33
gb|EAJ81723.1| unknown [environmental sequence] 145 3e-33
gb|EAG11159.1| unknown [environmental sequence] 145 3e-33
gb|EAK06595.1| unknown [environmental sequence] 144 4e-33
gb|EAJ97328.1| unknown [environmental sequence] 144 4e-33
gb|EAI91023.1| unknown [environmental sequence] 144 4e-33
gb|EAG98643.1| unknown [environmental sequence] 144 4e-33
gb|EAJ12344.1| unknown [environmental sequence] 144 6e-33
gb|EAH94208.1| unknown [environmental sequence] 144 6e-33
gb|EAC45100.1| unknown [environmental sequence] 144 6e-33
gb|EAE87018.1| unknown [environmental sequence] 144 6e-33
gb|EAK09649.1| unknown [environmental sequence] 143 8e-33
gb|EAI37324.1| unknown [environmental sequence] 143 8e-33
gb|EAH88136.1| unknown [environmental sequence] 143 1e-32
gb|EAF63401.1| unknown [environmental sequence] 143 1e-32
ref|ZP_01264578.1| Diaminopimelate epimerase (DAP epimerase... 143 1e-32
ref|YP_265682.1| Diaminopimelate epimerase (DAP epimerase) ... 142 1e-32
ref|YP_198348.1| Diaminopimelate epimerase [Wolbachia endos... 142 1e-32
ref|ZP_00141985.1| diaminopimelate epimerase [Rickettsia si... 142 1e-32
gb|EAK29682.1| unknown [environmental sequence] 142 2e-32
gb|EAJ55552.1| unknown [environmental sequence] 142 2e-32
gb|EAG94957.1| unknown [environmental sequence] 142 2e-32
gb|EAJ66595.1| unknown [environmental sequence] 142 2e-32
gb|EAF09247.1| unknown [environmental sequence] 142 2e-32
ref|ZP_00591116.1| Diaminopimelate epimerase [Prosthecochlo... 142 2e-32
gb|EAI57694.1| unknown [environmental sequence] 141 3e-32
gb|EAG94305.1| unknown [environmental sequence] 141 3e-32
ref|ZP_00899219.1| Diaminopimelate epimerase [Pseudomonas p... 141 3e-32
ref|ZP_00373125.1| diaminopimelate epimerase [Wolbachia end... 141 3e-32
gb|EAI91236.1| unknown [environmental sequence] 141 4e-32
gb|EAE52164.1| unknown [environmental sequence] 141 4e-32
ref|NP_355630.1| diaminopimelate epimerase [Agrobacterium t... 141 4e-32
gb|EAE45427.1| unknown [environmental sequence] 140 5e-32
ref|NP_360216.1| diaminopimelate epimerase [Rickettsia cono... 140 5e-32
gb|EAH87191.1| unknown [environmental sequence] 140 7e-32
ref|YP_246661.1| diaminopimelate epimerase [Rickettsia feli... 140 7e-32
ref|YP_825842.1| Diaminopimelate epimerase [Solibacter usit... 140 7e-32
gb|EAJ24089.1| unknown [environmental sequence] 140 9e-32
gb|EAH36539.1| unknown [environmental sequence] 140 9e-32
gb|EAF90539.1| unknown [environmental sequence] 140 9e-32
gb|EAC41717.1| unknown [environmental sequence] 140 9e-32
gb|EAI47597.1| unknown [environmental sequence] 139 1e-31
ref|NP_966920.1| diaminopimelate epimerase [Wolbachia endos... 139 2e-31
gb|EAI28302.1| unknown [environmental sequence] 139 2e-31
gb|EAC63549.1| unknown [environmental sequence] 139 2e-31
gb|EAF49530.1| unknown [environmental sequence] 139 2e-31
gb|EAG08935.1| unknown [environmental sequence] 138 3e-31
gb|EAB54800.1| unknown [environmental sequence] 138 4e-31
ref|XP_001123246.1| PREDICTED: hypothetical protein, partia... 138 4e-31
ref|ZP_00153619.1| COG0253: Diaminopimelate epimerase [Rick... 138 4e-31
gb|EAK13758.1| unknown [environmental sequence] 137 5e-31
gb|EAI02293.1| unknown [environmental sequence] 137 5e-31
gb|EAB58213.1| unknown [environmental sequence] 137 5e-31
ref|ZP_01391056.1| diaminopimelate epimerase [Methanoculleu... 137 5e-31
ref|YP_537822.1| Diaminopimelate epimerase [Rickettsia bell... 137 5e-31
ref|ZP_00340283.1| COG0253: Diaminopimelate epimerase [Rick... 137 5e-31
ref|ZP_00572720.1| Diaminopimelate epimerase [Frankia sp. E... 137 6e-31
gb|EAK73306.1| unknown [environmental sequence] 137 8e-31
gb|EAE07136.1| unknown [environmental sequence] 137 8e-31
ref|YP_770110.1| putative diaminopimelate epimerase [Rhizob... 137 8e-31
ref|YP_471427.1| diaminopimelate epimerase protein [Rhizobi... 136 1e-30
ref|NP_745920.1| diaminopimelate epimerase [Pseudomonas put... 136 1e-30
ref|YP_842885.1| Diaminopimelate epimerase [Methanosaeta th... 136 1e-30
ref|ZP_00909804.1| Diaminopimelate epimerase [Clostridium b... 136 1e-30
gb|EAI59333.1| unknown [environmental sequence] 136 1e-30
gb|EAK13299.1| unknown [environmental sequence] 135 2e-30
ref|YP_925026.1| Diaminopimelate epimerase [Nocardioides sp... 135 2e-30
gb|EAH34462.1| unknown [environmental sequence] 135 2e-30
gb|EAC39684.1| unknown [environmental sequence] 135 2e-30
ref|ZP_01347677.1| hypothetical protein RcanM_01000625 [Ric... 135 2e-30
ref|NP_533360.1| diaminopimelate epimerase [Agrobacterium t... 135 2e-30
gb|EAG71208.1| unknown [environmental sequence] 135 3e-30
gb|EAC20755.1| unknown [environmental sequence] 135 3e-30
gb|EAB41290.1| unknown [environmental sequence] 135 3e-30
ref|NP_214260.1| diaminopimelate epimerase [Aquifex aeolicu... 135 3e-30
ref|ZP_00532572.1| Diaminopimelate epimerase [Chlorobium ph... 134 4e-30
gb|EAI56701.1| unknown [environmental sequence] 134 5e-30
gb|EAE56890.1| unknown [environmental sequence] 134 5e-30
ref|NP_220796.1| diaminopimelate epimerase [Rickettsia prow... 134 5e-30
gb|EAK69127.1| unknown [environmental sequence] 133 9e-30
gb|EAG44057.1| unknown [environmental sequence] 133 9e-30
gb|EAF35364.1| unknown [environmental sequence] 133 9e-30
ref|YP_154367.1| diaminopimelate epimerase [Anaplasma margi... 133 9e-30
gb|EAB85187.1| unknown [environmental sequence] 133 1e-29
gb|EAH78550.1| unknown [environmental sequence] 132 1e-29
gb|EAA99612.1| unknown [environmental sequence] 132 1e-29
gb|EAE81835.1| unknown [environmental sequence] 132 2e-29
ref|YP_844195.1| Diaminopimelate epimerase [Syntrophobacter... 132 2e-29
gb|EAJ11114.1| unknown [environmental sequence] 132 3e-29
gb|EAK25803.1| unknown [environmental sequence] 131 4e-29
ref|ZP_01257626.1| Diaminopimelate epimerase (DAP epimerase... 131 4e-29
gb|EAI06288.1| unknown [environmental sequence] 130 6e-29
gb|EAH92204.1| unknown [environmental sequence] 130 6e-29
gb|EAF91677.1| unknown [environmental sequence] 130 6e-29
gb|EAF34147.1| unknown [environmental sequence] 130 6e-29
ref|ZP_01467031.1| diaminopimelate epimerase [Stigmatella a... 130 6e-29
ref|NP_823649.1| diaminopimelate epimerase [Streptomyces av... 130 6e-29
gb|EAC50252.1| unknown [environmental sequence] 130 7e-29
gb|EAB80484.1| unknown [environmental sequence] 130 7e-29
ref|NP_105218.1| diaminopimelate epimerase [Mesorhizobium l... 130 7e-29
ref|ZP_00995739.1| putative diaminopimelate epimerase [Jani... 130 7e-29
ref|YP_910709.1| Diaminopimelate epimerase [Chlorobium phae... 130 7e-29
gb|EAI36722.1| unknown [environmental sequence] 130 1e-28
gb|EAH80233.1| unknown [environmental sequence] 130 1e-28
gb|EAG32068.1| unknown [environmental sequence] 130 1e-28
ref|YP_715860.1| diaminopimelate epimerase [Frankia alni AC... 130 1e-28
gb|EAK07969.1| unknown [environmental sequence] 129 1e-28
gb|EAA81479.1| unknown [environmental sequence] 129 1e-28
ref|YP_482596.1| Diaminopimelate epimerase [Frankia sp. CcI... 129 1e-28
ref|YP_463783.1| diaminopimelate epimerase [Anaeromyxobacte... 129 1e-28
gb|EAI99157.1| unknown [environmental sequence] 129 2e-28
gb|EAH31995.1| unknown [environmental sequence] 129 2e-28
gb|EAF78599.1| unknown [environmental sequence] 129 2e-28
ref|YP_445539.1| diaminopimelate epimerase [Salinibacter ru... 129 2e-28
ref|YP_067360.1| diaminopimelate epimerase [Rickettsia typh... 128 4e-28
ref|YP_591697.1| Diaminopimelate epimerase [Acidobacteria b... 127 5e-28
gb|EAK22960.1| unknown [environmental sequence] 127 6e-28
gb|EAH46050.1| unknown [environmental sequence] 127 6e-28
gb|EAJ76849.1| unknown [environmental sequence] 126 1e-27
gb|EAD84767.1| unknown [environmental sequence] 126 1e-27
gb|EAG63176.1| unknown [environmental sequence] 126 1e-27
ref|ZP_00372732.1| diaminopimelate epimerase [Wolbachia end... 126 1e-27
gb|EAC95905.1| unknown [environmental sequence] 125 2e-27
gb|EAB41145.1| unknown [environmental sequence] 125 2e-27
gb|EAH24551.1| unknown [environmental sequence] 125 2e-27
gb|EAK33551.1| unknown [environmental sequence] 125 3e-27
gb|EAB57398.1| unknown [environmental sequence] 125 3e-27
ref|NP_629917.1| diaminopimelate epimerase [Streptomyces co... 125 3e-27
gb|EAG52918.1| unknown [environmental sequence] 124 4e-27
ref|YP_460118.1| diaminopimelate epimerase [Syntrophus acid... 124 4e-27
gb|EAG49760.1| unknown [environmental sequence] 124 5e-27
ref|YP_633209.1| diaminopimelate epimerase [Myxococcus xant... 124 5e-27
gb|EAD84835.1| unknown [environmental sequence] 124 7e-27
ref|YP_001030001.1| hypothetical protein Mlab_0560 [Methano... 123 9e-27
gb|EAG88027.1| unknown [environmental sequence] 123 1e-26
gb|EAF18590.1| unknown [environmental sequence] 123 1e-26
ref|ZP_00511086.1| Diaminopimelate epimerase [Chlorobium li... 123 1e-26
gb|EAK33215.1| unknown [environmental sequence] 122 2e-26
gb|EAK05385.1| unknown [environmental sequence] 122 2e-26
ref|ZP_00603093.1| Diaminopimelate epimerase [Enterococcus ... 122 2e-26
ref|YP_375862.1| Diaminopimelate epimerase [Pelodictyon lut... 122 2e-26
ref|XP_636208.1| hypothetical protein DDBDRAFT_0188427 [Dic... 122 2e-26
gb|EAH77460.1| unknown [environmental sequence] 122 3e-26
gb|EAE78347.1| unknown [environmental sequence] 121 3e-26
gb|EAE67231.1| unknown [environmental sequence] 121 3e-26
gb|EAE15552.1| unknown [environmental sequence] 121 5e-26
gb|EAG89543.1| unknown [environmental sequence] 119 1e-25
gb|EAB91238.1| unknown [environmental sequence] 119 1e-25
gb|EAC07515.1| unknown [environmental sequence] 119 2e-25
gb|EAF62421.1| unknown [environmental sequence] 119 2e-25
ref|ZP_01247531.1| Diaminopimelate epimerase [Flavobacteriu... 119 2e-25
ref|YP_503740.1| Diaminopimelate epimerase [Methanospirillu... 119 2e-25
gb|EAJ08792.1| unknown [environmental sequence] 118 3e-25
gb|EAC34777.1| unknown [environmental sequence] 118 4e-25
gb|EAC62184.1| unknown [environmental sequence] 117 5e-25
gb|EAF07239.1| unknown [environmental sequence] 117 5e-25
gb|EAH13829.1| unknown [environmental sequence] 117 7e-25
gb|EAG02031.1| unknown [environmental sequence] 117 7e-25
gb|EAC65088.1| unknown [environmental sequence] 117 8e-25
ref|ZP_01290147.1| Diaminopimelate epimerase [delta proteob... 117 8e-25
gb|EAK29035.1| unknown [environmental sequence] 116 1e-24
gb|EAD25737.1| unknown [environmental sequence] 116 1e-24
gb|EAB25933.1| unknown [environmental sequence] 116 1e-24
gb|EAE41942.1| unknown [environmental sequence] 116 1e-24
ref|YP_378658.1| Diaminopimelate epimerase [Chlorobium chlo... 116 1e-24
ref|ZP_01289171.1| Diaminopimelate epimerase [delta proteob... 115 2e-24
gb|EAG13949.1| unknown [environmental sequence] 114 4e-24
gb|EAG01517.1| unknown [environmental sequence] 114 4e-24
ref|YP_966743.1| Diaminopimelate epimerase [Desulfovibrio v... 114 4e-24
ref|ZP_01013821.1| diaminopimelate epimerase [Rhodobacteral... 114 4e-24
ref|ZP_01648961.1| Diaminopimelate epimerase [Salinispora a... 114 6e-24
ref|YP_860669.1| diaminopimelate epimerase [Gramella forset... 114 6e-24
ref|YP_595270.1| diaminopimelate epimerase [Lawsonia intrac... 114 6e-24
gb|EAK42546.1| unknown [environmental sequence] 114 7e-24
gb|EAC68867.1| unknown [environmental sequence] 114 7e-24
ref|ZP_01257023.1| Diaminopimelate epimerase (DAP epimerase... 114 7e-24
gb|EAC45623.1| unknown [environmental sequence] 113 9e-24
gb|EAG36391.1| unknown [environmental sequence] 113 1e-23
gb|EAF08051.1| unknown [environmental sequence] 113 1e-23
ref|ZP_01202084.1| diaminopimelate epimerase [Flavobacteria... 113 1e-23
gb|EAJ91060.1| unknown [environmental sequence] 112 2e-23
gb|EAD27394.1| unknown [environmental sequence] 112 2e-23
gb|EAF21046.1| unknown [environmental sequence] 112 2e-23
ref|YP_011084.1| diaminopimelate epimerase [Desulfovibrio v... 112 2e-23
gb|EAJ09295.1| unknown [environmental sequence] 112 2e-23
gb|EAD88929.1| unknown [environmental sequence] 112 3e-23
ref|YP_388290.1| diaminopimelate epimerase [Desulfovibrio d... 112 3e-23
ref|YP_288877.1| diaminopimelate epimerase [Thermobifida fu... 112 3e-23
gb|AAC67537.1| diaminopimelate epimerase DafE [Dictyosteliu... 111 5e-23
ref|XP_647106.1| diaminopimelate epimerase [Dictyostelium d... 111 5e-23
gb|EAH83892.1| unknown [environmental sequence] 110 6e-23
ref|YP_873241.1| Diaminopimelate epimerase [Acidothermus ce... 110 6e-23
gb|EAK50598.1| unknown [environmental sequence] 110 8e-23
gb|EAI84997.1| unknown [environmental sequence] 110 8e-23
ref|ZP_00052226.1| COG0253: Diaminopimelate epimerase [Magn... 110 1e-22
gb|EAB83003.1| unknown [environmental sequence] 109 1e-22
ref|ZP_01428505.1| Diaminopimelate epimerase [Salinispora t... 109 1e-22
ref|NP_939790.1| diaminopimelate epimerase [Corynebacterium... 109 1e-22
ref|NP_601150.1| diaminopimelate epimerase [Corynebacterium... 109 1e-22
ref|NP_662896.1| diaminopimelate epimerase [Chlorobium tepi... 109 1e-22
ref|ZP_00661131.1| Diaminopimelate epimerase [Prosthecochlo... 109 1e-22
gb|EAJ40979.1| unknown [environmental sequence] 109 2e-22
gb|EAD06740.1| unknown [environmental sequence] 109 2e-22
ref|YP_055730.1| diaminopimelate epimerase [Propionibacteri... 109 2e-22
ref|ZP_01050803.1| Diaminopimelate epimerase [Cellulophaga ... 109 2e-22
gb|EAJ40135.1| unknown [environmental sequence] 108 2e-22
ref|XP_646484.1| hypothetical protein DDBDRAFT_0190752 [Dic... 108 2e-22
gb|EAF51980.1| unknown [environmental sequence] 108 3e-22
gb|EAJ88936.1| unknown [environmental sequence] 108 4e-22
gb|EAD06681.1| unknown [environmental sequence] 108 4e-22
gb|EAK05499.1| unknown [environmental sequence] 107 5e-22
gb|EAH43135.1| unknown [environmental sequence] 107 5e-22
ref|ZP_01452700.1| diaminopimelate epimerase [Mariprofundus... 107 5e-22
gb|EAE57862.1| unknown [environmental sequence] 107 7e-22
ref|YP_830958.1| Diaminopimelate epimerase [Arthrobacter sp... 107 7e-22
ref|ZP_01693177.1| diaminopimelate epimerase [Microscilla m... 107 9e-22
ref|YP_953254.1| Diaminopimelate epimerase [Mycobacterium v... 107 9e-22
gb|EAJ49104.1| unknown [environmental sequence] 106 1e-21
gb|EAE42863.1| unknown [environmental sequence] 106 1e-21
gb|EAJ90319.1| unknown [environmental sequence] 106 1e-21
gb|EAJ48869.1| unknown [environmental sequence] 106 1e-21
gb|EAD24664.1| unknown [environmental sequence] 106 1e-21
ref|YP_938197.1| Diaminopimelate epimerase [Mycobacterium s... 106 1e-21
ref|YP_007441.1| putative diaminopimelate epimerase [Candid... 106 1e-21
ref|YP_887068.1| diaminopimelate epimerase [Mycobacterium s... 105 2e-21
ref|NP_301738.1| diaminopimelate epimerase [Mycobacterium l... 105 2e-21
gb|EAF72143.1| unknown [environmental sequence] 105 3e-21
gb|EAE38335.1| unknown [environmental sequence] 105 3e-21
gb|EAB77089.1| unknown [environmental sequence] 105 3e-21
ref|ZP_01170762.1| diaminopimelate epimerase [Bacillus sp. ... 105 3e-21
ref|ZP_01275907.1| Diaminopimelate epimerase [Mycobacterium... 104 4e-21
ref|NP_967073.1| hypothetical protein Bd0045 [Bdellovibrio ... 104 4e-21
gb|EAJ83750.1| unknown [environmental sequence] 103 7e-21
gb|EAI49154.1| unknown [environmental sequence] 103 7e-21
gb|EAI44765.1| unknown [environmental sequence] 103 7e-21
gb|EAH78234.1| unknown [environmental sequence] 103 1e-20
gb|EAH29923.1| unknown [environmental sequence] 103 1e-20
sp|Q8FPE1|DAPF_COREF Diaminopimelate epimerase (DAP epimerase) 103 1e-20
ref|NP_738447.1| diaminopimelate epimerase [Corynebacterium... 103 1e-20
ref|ZP_01194590.1| Diaminopimelate epimerase [Mycobacterium... 103 1e-20
ref|YP_907020.1| diaminopimelate epimerase DapF [Mycobacter... 102 2e-20
ref|ZP_01308814.1| diaminopimelate epimerase [Candidatus Su... 102 2e-20
ref|YP_947364.1| diaminopimelate epimerase [Arthrobacter au... 102 2e-20
ref|YP_706707.1| diaminopimelate epimerase [Rhodococcus sp.... 102 2e-20
ref|NP_961774.1| diaminopimelate epimerase [Mycobacterium a... 102 2e-20
ref|YP_064169.1| diaminopimelate epimerase [Desulfotalea ps... 102 2e-20
ref|YP_882796.1| diaminopimelate epimerase [Mycobacterium a... 101 4e-20
gb|EAH69982.1| unknown [environmental sequence] 100 6e-20
gb|EAB96868.1| unknown [environmental sequence] 100 6e-20
ref|YP_657283.1| diaminopimelate epimerase (DAP epimerase) ... 100 6e-20
gb|EAE79985.1| unknown [environmental sequence] 100 8e-20
gb|EAK16677.1| unknown [environmental sequence] 100 1e-19
ref|NP_349231.1| diaminopimelate epimerase [Clostridium ace... 100 1e-19
gb|EAK62673.1| unknown [environmental sequence] 100 1e-19
gb|EAD20496.1| unknown [environmental sequence] 99 2e-19
gb|EAF05509.1| unknown [environmental sequence] 99 2e-19
ref|ZP_01252597.1| diaminopimelate epimerase [Psychroflexus... 99 2e-19
ref|ZP_00951205.1| Diaminopimelate epimerase [Croceibacter ... 99 2e-19
ref|XP_646485.1| hypothetical protein DDBDRAFT_0190753 [Dic... 99 2e-19
gb|EAI45294.1| unknown [environmental sequence] 99 2e-19
gb|EAB83422.1| unknown [environmental sequence] 99 3e-19
gb|EAY42933.1| diaminopimelate epimerase [Bacillus coagulan... 98 4e-19
gb|EAE06042.1| unknown [environmental sequence] 98 5e-19
gb|EAH57928.1| unknown [environmental sequence] 97 7e-19
gb|EAJ67351.1| unknown [environmental sequence] 97 9e-19
gb|EAH53823.1| unknown [environmental sequence] 97 1e-18
gb|EAE98458.1| unknown [environmental sequence] 97 1e-18
gb|EAG99075.1| unknown [environmental sequence] 96 2e-18
gb|EAG95924.1| unknown [environmental sequence] 96 2e-18
gb|EAF83391.1| unknown [environmental sequence] 96 2e-18
ref|ZP_01061277.1| Diaminopimelate epimerase [Flavobacteriu... 96 2e-18
gb|EAK65957.1| unknown [environmental sequence] 95 3e-18
ref|YP_850235.1| diaminopimelate epimerase [Listeria welshi... 95 3e-18
gb|EAI85968.1| unknown [environmental sequence] 95 5e-18
gb|EAH65244.1| unknown [environmental sequence] 95 5e-18
gb|EAG03525.1| unknown [environmental sequence] 95 5e-18
gb|EAF96464.1| unknown [environmental sequence] 95 5e-18
ref|NP_785683.1| diaminopimelate epimerase [Lactobacillus p... 95 5e-18
gb|EAI40154.1| unknown [environmental sequence] 94 6e-18
ref|YP_676760.1| diaminopimelate epimerase [Cytophaga hutch... 94 6e-18
gb|EAG15631.1| unknown [environmental sequence] 94 8e-18
gb|EAC69884.1| unknown [environmental sequence] 94 8e-18
gb|EAC53125.1| unknown [environmental sequence] 94 8e-18
ref|NP_217242.1| diaminopimelate epimerase [Mycobacterium t... 94 8e-18
ref|ZP_00877842.1| COG0253: Diaminopimelate epimerase [Myco... 94 8e-18
gb|EAJ93322.1| unknown [environmental sequence] 94 1e-17
ref|NP_814248.1| diaminopimelate epimerase [Enterococcus fa... 94 1e-17
gb|EAK25235.1| unknown [environmental sequence] 93 1e-17
gb|EAB46797.1| unknown [environmental sequence] 93 1e-17
ref|ZP_01274076.1| Diaminopimelate epimerase [Lactobacillus... 93 1e-17
ref|ZP_01163700.1| Diaminopimelate epimerase [Lactobacillus... 93 2e-17
gb|EAK07021.1| unknown [environmental sequence] 92 2e-17
gb|EAC75152.1| unknown [environmental sequence] 92 2e-17
ref|ZP_01139498.1| Diaminopimelate epimerase [Dehalococcoid... 92 2e-17
ref|ZP_01105996.1| diaminopimelate epimerase [Flavobacteria... 92 2e-17
gb|EAD04062.1| unknown [environmental sequence] 92 3e-17
ref|ZP_01054294.1| Diaminopimelate epimerase [Tenacibaculum... 92 3e-17
gb|EAF28395.1| unknown [environmental sequence] 92 4e-17
gb|EAE86951.1| unknown [environmental sequence] 92 4e-17
ref|ZP_01144872.1| diaminopimelate epimerase [Acidiphilium ... 92 4e-17
gb|EAG42301.1| unknown [environmental sequence] 91 5e-17
gb|EAE91483.1| unknown [environmental sequence] 91 5e-17
gb|EAJ16608.1| unknown [environmental sequence] 91 7e-17
gb|EAF33662.1| unknown [environmental sequence] 91 7e-17
ref|ZP_00378187.1| COG0253: Diaminopimelate epimerase [Brev... 91 9e-17
gb|EAH21000.1| unknown [environmental sequence] 90 1e-16
gb|EAC72614.1| unknown [environmental sequence] 90 1e-16
gb|EAH46035.1| unknown [environmental sequence] 90 1e-16
ref|NP_876812.1| diaminopimelate epimerase [Chlamydophila p... 90 1e-16
ref|NP_224715.1| diaminopimelate epimerase [Chlamydophila p... 90 1e-16
ref|ZP_01121403.1| diaminopimelate epimerase [Robiginitalea... 90 1e-16
ref|YP_892886.1| diaminopimelate epimerase [Campylobacter f... 89 2e-16
ref|NP_471460.1| diaminopimelate epimerase [Listeria innocu... 89 2e-16
ref|ZP_01139487.1| Diaminopimelate epimerase [Dehalococcoid... 89 2e-16
ref|ZP_01119165.1| Diaminopimelate epimerase [Polaribacter ... 89 2e-16
gb|EAI62345.1| unknown [environmental sequence] 89 2e-16
gb|EAI07810.1| unknown [environmental sequence] 89 2e-16
gb|EAC21723.1| unknown [environmental sequence] 89 2e-16
gb|EAC20827.1| unknown [environmental sequence] 89 2e-16
gb|EAB41572.1| unknown [environmental sequence] 89 2e-16
gb|EAC33381.1| unknown [environmental sequence] 89 3e-16
ref|YP_535749.1| Diaminopimelate epimerase [Lactobacillus s... 89 3e-16
ref|NP_465542.1| diaminopimelate epimerase [Listeria monocy... 89 3e-16
ref|ZP_01130102.1| diaminopimelate epimerase [marine actino... 89 3e-16
gb|EAC58152.1| unknown [environmental sequence] 88 4e-16
gb|EAA98302.1| unknown [environmental sequence] 88 4e-16
ref|YP_250892.1| hypothetical protein jk1110 [Corynebacteri... 88 6e-16
gb|EAB85323.1| unknown [environmental sequence] 87 7e-16
gb|EAB72652.1| unknown [environmental sequence] 87 7e-16
gb|EAE39091.1| unknown [environmental sequence] 87 7e-16
ref|YP_014636.1| diaminopimelate epimerase [Listeria monocy... 87 7e-16
gb|EAK75032.1| unknown [environmental sequence] 87 9e-16
gb|EAD46826.1| unknown [environmental sequence] 87 9e-16
ref|ZP_00230962.1| diaminopimelate epimerase [Listeria mono... 87 9e-16
gb|EAI95824.1| unknown [environmental sequence] 87 1e-15
gb|EAC93312.1| unknown [environmental sequence] 87 1e-15
gb|EAE83232.1| unknown [environmental sequence] 87 1e-15
gb|EAF45113.1| unknown [environmental sequence] 86 2e-15
ref|YP_062496.1| diaminopimelate epimerase [Leifsonia xyli ... 86 2e-15
gb|EAE62890.1| unknown [environmental sequence] 86 2e-15
gb|EAJ38076.1| unknown [environmental sequence] 85 5e-15
gb|EAC86229.1| unknown [environmental sequence] 85 5e-15
gb|EAE44245.1| unknown [environmental sequence] 85 5e-15
ref|NP_829099.1| diaminopimelate epimerase [Chlamydophila c... 85 5e-15
gb|EAI06782.1| unknown [environmental sequence] 84 6e-15
gb|EAC28445.1| unknown [environmental sequence] 84 6e-15
ref|YP_120041.1| diaminopimelate epimerase [Nocardia farcin... 84 6e-15
ref|ZP_00618304.1| Diaminopimelate epimerase [Kineococcus r... 84 6e-15
gb|EAD01819.1| unknown [environmental sequence] 84 8e-15
gb|EAB79235.1| unknown [environmental sequence] 84 8e-15
gb|EAF12978.1| unknown [environmental sequence] 84 8e-15
gb|EAJ66759.1| unknown [environmental sequence] 84 1e-14
gb|EAF52140.1| unknown [environmental sequence] 84 1e-14
gb|EAK58904.1| unknown [environmental sequence] 83 1e-14
gb|EAI50432.1| unknown [environmental sequence] 83 1e-14
gb|EAF69471.1| unknown [environmental sequence] 83 1e-14
gb|EAE67305.1| unknown [environmental sequence] 83 1e-14
ref|ZP_01523933.1| Diaminopimelate epimerase [Fervidobacter... 83 1e-14
ref|NP_861232.1| diaminopimelate epimerase [Helicobacter he... 83 1e-14
ref|ZP_00234248.1| diaminopimelate epimerase [Listeria mono... 83 1e-14
gb|EAK53367.1| unknown [environmental sequence] 83 2e-14
gb|EAC96055.1| unknown [environmental sequence] 83 2e-14
gb|EAB69361.1| unknown [environmental sequence] 83 2e-14
gb|EAB35011.1| unknown [environmental sequence] 83 2e-14
ref|ZP_01379054.1| hypothetical protein Cjejd_01000451 [Cam... 83 2e-14
ref|ZP_00369575.1| diaminopimelate epimerase [Campylobacter... 83 2e-14
gb|EAJ80883.1| unknown [environmental sequence] 82 2e-14
gb|EAD69742.1| unknown [environmental sequence] 82 2e-14
gb|EAG18912.1| unknown [environmental sequence] 82 2e-14
gb|EAF99946.1| unknown [environmental sequence] 82 2e-14
ref|NP_613719.1| Diaminopimelate epimerase [Methanopyrus ka... 82 2e-14
ref|ZP_01070920.1| diaminopimelate epimerase [Campylobacter... 82 2e-14
gb|EAB73258.1| unknown [environmental sequence] 82 3e-14
ref|NP_282662.1| diaminopimelate epimerase [Campylobacter j... 82 3e-14
gb|EAE65064.1| unknown [environmental sequence] 82 4e-14
gb|EAE43407.1| unknown [environmental sequence] 82 4e-14
ref|NP_207361.1| diaminopimelate epimerase [Helicobacter py... 82 4e-14
ref|YP_179680.1| diaminopimelate epimerase [Campylobacter j... 81 5e-14
ref|ZP_01070239.1| diaminopimelate epimerase [Campylobacter... 81 5e-14
gb|EAI27825.1| unknown [environmental sequence] 81 7e-14
ref|ZP_01652145.1| Diaminopimelate epimerase [Thermotoga pe... 81 7e-14
gb|EAE76590.1| unknown [environmental sequence] 80 9e-14
gb|EAE22284.1| unknown [environmental sequence] 80 9e-14
ref|ZP_01375081.1| hypothetical protein Ccon1_01000258 [Cam... 80 9e-14
ref|ZP_00370823.1| diaminopimelate epimerase [Campylobacter... 80 9e-14
gb|EAD72257.1| unknown [environmental sequence] 80 1e-13
gb|EAC66840.1| unknown [environmental sequence] 80 1e-13
gb|EAF65889.1| unknown [environmental sequence] 80 1e-13
gb|EAE19607.1| unknown [environmental sequence] 80 1e-13
ref|YP_627286.1| diaminopimelate epimerase [Helicobacter py... 80 1e-13
ref|YP_515697.1| diaminopimelate epimerase [Chlamydophila f... 80 2e-13
ref|NP_297088.1| diaminopimelate epimerase [Chlamydia murid... 80 2e-13
gb|EAH93625.1| unknown [environmental sequence] 79 2e-13
ref|YP_910030.1| diaminopimelate epimerase [Bifidobacterium... 79 2e-13
gb|EAH02570.1| unknown [environmental sequence] 79 3e-13
gb|EAE34232.1| unknown [environmental sequence] 79 3e-13
gb|EAE28712.1| unknown [environmental sequence] 79 3e-13
ref|NP_229322.1| diaminopimelate epimerase [Thermotoga mari... 79 3e-13
ref|YP_803687.1| Diaminopimelate epimerase [Pediococcus pen... 79 3e-13
gb|EAH70706.1| unknown [environmental sequence] 79 3e-13
gb|EAH64187.1| unknown [environmental sequence] 78 4e-13
gb|EAC17609.1| unknown [environmental sequence] 78 4e-13
ref|ZP_00371482.1| diaminopimelate epimerase [Campylobacter... 78 4e-13
gb|EAC00257.1| unknown [environmental sequence] 78 6e-13
gb|EAE56051.1| unknown [environmental sequence] 78 6e-13
ref|NP_223231.1| diaminopimelate epimerase [Helicobacter py... 78 6e-13
ref|YP_664575.1| hypothetical protein Hac_0786 [Helicobacte... 77 7e-13
gb|EAD31985.1| unknown [environmental sequence] 77 1e-12
gb|EAC13776.1| unknown [environmental sequence] 77 1e-12
gb|EAA83744.1| unknown [environmental sequence] 77 1e-12
gb|EAK08549.1| unknown [environmental sequence] 76 2e-12
gb|EAI60377.1| unknown [environmental sequence] 76 2e-12
gb|EAH61806.1| unknown [environmental sequence] 76 2e-12
gb|EAH00948.1| unknown [environmental sequence] 76 2e-12
gb|EAB91721.1| unknown [environmental sequence] 76 2e-12
gb|EAG04190.1| unknown [environmental sequence] 76 2e-12
gb|EAB17894.1| unknown [environmental sequence] 76 2e-12
gb|EAH17478.1| unknown [environmental sequence] 75 4e-12
gb|EAG20529.1| unknown [environmental sequence] 75 4e-12
gb|EAG56413.1| unknown [environmental sequence] 74 6e-12
gb|EAE63441.1| unknown [environmental sequence] 74 6e-12
gb|EAF86576.1| unknown [environmental sequence] 74 1e-11
ref|ZP_01375649.1| hypothetical protein Ccur5_01001654 [Cam... 74 1e-11
gb|EAH08955.1| unknown [environmental sequence] 73 1e-11
gb|EAC24005.1| unknown [environmental sequence] 73 1e-11
gb|EAF04168.1| unknown [environmental sequence] 73 1e-11
ref|NP_695316.1| diaminopimelate epimerase [Bifidobacterium... 73 1e-11
ref|YP_219650.1| diaminopimelate epimerase [Chlamydophila a... 73 1e-11
ref|ZP_00121261.2| COG0253: Diaminopimelate epimerase [Bifi... 73 1e-11
ref|YP_394555.1| Diaminopimelate epimerase [Thiomicrospira ... 73 2e-11
ref|NP_908244.1| diaminopimelate epimerase [Wolinella succi... 73 2e-11
gb|EAF30212.1| unknown [environmental sequence] 72 2e-11
gb|EAE56401.1| unknown [environmental sequence] 72 2e-11
ref|YP_193741.1| diaminopimelate epimerase [Lactobacillus a... 72 2e-11
gb|EAG49494.1| unknown [environmental sequence] 72 3e-11
gb|EAC21870.1| unknown [environmental sequence] 72 3e-11
gb|EAB41207.1| unknown [environmental sequence] 72 4e-11
gb|EAE42278.1| unknown [environmental sequence] 72 4e-11
ref|YP_944620.1| diaminopimelate epimerase [Psychromonas in... 72 4e-11
ref|YP_328250.1| diaminopimelate epimerase [Chlamydia trach... 72 4e-11
ref|NP_219942.1| diaminopimelate epimerase [Chlamydia trach... 72 4e-11
gb|EAG60021.1| unknown [environmental sequence] 71 5e-11
gb|EAF74133.1| unknown [environmental sequence] 71 5e-11
gb|EAF89304.1| unknown [environmental sequence] 71 7e-11
gb|EAC32596.1| unknown [environmental sequence] 71 7e-11
gb|EAB44402.1| unknown [environmental sequence] 71 7e-11
gb|EAK27236.1| unknown [environmental sequence] 70 1e-10
gb|EAB32636.1| unknown [environmental sequence] 70 1e-10
gb|EAD51993.1| unknown [environmental sequence] 69 2e-10
gb|EAC26316.1| unknown [environmental sequence] 69 2e-10
gb|EAD90487.1| unknown [environmental sequence] 69 2e-10
ref|YP_805406.1| Diaminopimelate epimerase [Lactobacillus c... 68 5e-10
gb|EAH36295.1| unknown [environmental sequence] 67 8e-10
gb|EAD82611.1| unknown [environmental sequence] 67 8e-10
gb|AAV49044.1| DapF [Azospirillum lipoferum] 67 8e-10
gb|EAB19570.1| unknown [environmental sequence] 67 1e-09
gb|EAK49770.1| unknown [environmental sequence] 67 1e-09
gb|EAF74321.1| unknown [environmental sequence] 66 2e-09
gb|EAH54610.1| unknown [environmental sequence] 66 2e-09
gb|EAF62945.1| unknown [environmental sequence] 66 2e-09
gb|EAH77043.1| unknown [environmental sequence] 65 3e-09
gb|EAH41659.1| unknown [environmental sequence] 65 3e-09
gb|EAD31967.1| unknown [environmental sequence] 65 3e-09
gb|EAB18696.1| unknown [environmental sequence] 65 3e-09
ref|YP_802575.1| diaminopimelate epimerase [Candidatus Cars... 65 4e-09
gb|EAJ35222.1| unknown [environmental sequence] 65 5e-09
gb|EAF19821.1| unknown [environmental sequence] 65 5e-09
gb|EAC86851.1| unknown [environmental sequence] 64 9e-09
gb|EAF48552.1| unknown [environmental sequence] 64 9e-09
gb|EAI91530.1| unknown [environmental sequence] 63 1e-08
gb|EAC91600.1| unknown [environmental sequence] 63 2e-08
gb|EAF21402.1| unknown [environmental sequence] 63 2e-08
gb|EAE75471.1| unknown [environmental sequence] 63 2e-08
gb|EAH72419.1| unknown [environmental sequence] 62 2e-08
gb|EAA80066.1| unknown [environmental sequence] 62 2e-08
gb|EAF37574.1| unknown [environmental sequence] 62 4e-08
gb|EAC64834.1| unknown [environmental sequence] 61 6e-08
gb|EAC53686.1| unknown [environmental sequence] 61 6e-08
gb|EAB94804.1| unknown [environmental sequence] 61 6e-08
gb|EAJ57998.1| unknown [environmental sequence] 61 7e-08
gb|EAH43443.1| unknown [environmental sequence] 61 7e-08
ref|ZP_01654010.1| diaminopimelate epimerase [Thermosipho m... 61 7e-08
gb|EAI66451.1| unknown [environmental sequence] 60 9e-08
ref|YP_434806.1| diaminopimelate epimerase [Hahella chejuen... 60 9e-08
gb|EAH63414.1| unknown [environmental sequence] 60 1e-07
gb|EAD29412.1| unknown [environmental sequence] 60 2e-07
gb|EAF83158.1| unknown [environmental sequence] 59 2e-07
gb|EAB33539.1| unknown [environmental sequence] 59 2e-07
gb|EAG28648.1| unknown [environmental sequence] 59 3e-07
gb|EAC55782.1| unknown [environmental sequence] 59 3e-07
gb|EAE03734.1| unknown [environmental sequence] 59 3e-07
gb|EAI45444.1| unknown [environmental sequence] 58 6e-07
gb|EAC36006.1| unknown [environmental sequence] 58 6e-07
gb|EAK79631.1| unknown [environmental sequence] 57 1e-06
gb|EAG07146.1| unknown [environmental sequence] 57 1e-06
gb|EAB36560.1| unknown [environmental sequence] 57 1e-06
gb|EAC61011.1| unknown [environmental sequence] 56 2e-06
gb|EAJ02014.1| unknown [environmental sequence] 55 3e-06
gb|EAD72938.1| unknown [environmental sequence] 55 3e-06
ref|YP_261131.1| diaminopimelate epimerase [Pseudomonas flu... 55 3e-06
gb|EAC14982.1| unknown [environmental sequence] 55 4e-06
gb|EAF19664.1| unknown [environmental sequence] 55 4e-06
gb|EAB18435.1| unknown [environmental sequence] 55 4e-06
gb|EAK21059.1| unknown [environmental sequence] 55 5e-06
gb|EAD09157.1| unknown [environmental sequence] 55 5e-06
gb|EAB74017.1| unknown [environmental sequence] 55 5e-06
gb|EAG39999.1| unknown [environmental sequence] 54 7e-06
gb|EAC30184.1| unknown [environmental sequence] 54 7e-06
gb|EAF39347.1| unknown [environmental sequence] 54 7e-06
gb|EAA85968.1| unknown [environmental sequence] 54 7e-06
gb|EAH36264.1| unknown [environmental sequence] 54 1e-05
gb|EAF28740.1| unknown [environmental sequence] 54 1e-05
ref|YP_349510.1| Diaminopimelate epimerase-like [Pseudomona... 54 1e-05
gb|EAH66737.1| unknown [environmental sequence] 53 2e-05
gb|EAD17578.1| unknown [environmental sequence] 53 2e-05
gb|EAE99269.1| unknown [environmental sequence] 52 3e-05
gb|EAG13951.1| unknown [environmental sequence] 52 4e-05
gb|EAH30163.1| unknown [environmental sequence] 51 6e-05
gb|EAH23875.1| unknown [environmental sequence] 51 6e-05
gb|EAD25934.1| unknown [environmental sequence] 51 6e-05
gb|EAB10722.1| unknown [environmental sequence] 51 6e-05
emb|CAA60229.1| dapF [Clostridium perfringens] 51 6e-05
gb|EAK33423.1| unknown [environmental sequence] 51 7e-05
gb|EAG93803.1| unknown [environmental sequence] 50 1e-04
gb|EAF35743.1| unknown [environmental sequence] 50 1e-04
gb|EAB48184.1| unknown [environmental sequence] 50 1e-04
gb|EAB34364.1| unknown [environmental sequence] 50 1e-04
gb|EAH11924.1| unknown [environmental sequence] 49 3e-04
gb|EAJ44834.1| unknown [environmental sequence] 48 5e-04
gb|EAI00042.1| unknown [environmental sequence] 48 5e-04
gb|EAH22964.1| unknown [environmental sequence] 48 5e-04
gb|AAY53793.1| putative diaminopimelate epimerase [Campylob... 48 6e-04
gb|EAF18589.1| unknown [environmental sequence] 47 8e-04
gb|EAG17253.1| unknown [environmental sequence] 47 0.001
gb|EAG82288.1| unknown [environmental sequence] 46 0.002
gb|EAJ63423.1| unknown [environmental sequence] 46 0.002
ref|ZP_00050893.2| COG0253: Diaminopimelate epimerase [Magn... 45 0.003
gb|EAJ75711.1| unknown [environmental sequence] 45 0.004
gb|EAI22572.1| unknown [environmental sequence] 45 0.004
gb|EAC29928.1| unknown [environmental sequence] 45 0.004
gb|EAF66250.1| unknown [environmental sequence] 45 0.004
gb|EAK66329.1| unknown [environmental sequence] 45 0.005
gb|EAB46433.1| unknown [environmental sequence] 44 0.012
gb|EAK30706.1| unknown [environmental sequence] 43 0.016
gb|EAC49309.1| unknown [environmental sequence] 43 0.020
gb|EAE94845.1| unknown [environmental sequence] 42 0.045
gb|EAC12019.1| unknown [environmental sequence] 41 0.059
gb|EAC18629.1| unknown [environmental sequence] 41 0.077
>ref|AP_003990.1| diaminopimelate epimerase [Escherichia coli W3110]
ref|NP_418254.2| diaminopimelate epimerase [Escherichia coli K12]
ref|YP_671864.1| diaminopimelate epimerase [Escherichia coli 536]
sp|P0A6K1|DAPF_ECOLI Diaminopimelate epimerase (DAP epimerase)
sp|P0A6K2|DAPF_ECO57 Diaminopimelate epimerase (DAP epimerase)
dbj|BAE77491.1| diaminopimelate epimerase [Escherichia coli W3110]
gb|AAC76812.2| diaminopimelate epimerase [Escherichia coli K12]
gb|ABG71963.1| diaminopimelate epimerase [Escherichia coli 536]
gb|EAY46712.1| Diaminopimelate epimerase [Escherichia coli B]
Length = 274
Score = 558 bits (1439), Expect = e-158
Identities = 274/274 (100%), Positives = 274/274 (100%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
Sbjct: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
Sbjct: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
Sbjct: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
Sbjct: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
>ref|NP_290438.1| diaminopimelate epimerase [Escherichia coli O157:H7 EDL933]
ref|NP_312766.1| diaminopimelate epimerase [Escherichia coli O157:H7 str. Sakai]
ref|YP_312740.1| diaminopimelate epimerase [Shigella sonnei Ss046]
ref|ZP_00701821.1| COG0253: Diaminopimelate epimerase [Escherichia coli E24377A]
ref|ZP_00707765.1| COG0253: Diaminopimelate epimerase [Escherichia coli HS]
ref|ZP_00709782.1| COG0253: Diaminopimelate epimerase [Escherichia coli B171]
ref|ZP_00717236.1| COG0253: Diaminopimelate epimerase [Escherichia coli B7A]
ref|ZP_00720951.1| COG0253: Diaminopimelate epimerase [Escherichia coli F11]
ref|ZP_00722261.1| COG0253: Diaminopimelate epimerase [Escherichia coli E110019]
ref|ZP_00727942.1| COG0253: Diaminopimelate epimerase [Escherichia coli E22]
ref|ZP_00735144.1| COG0253: Diaminopimelate epimerase [Escherichia coli 53638]
ref|YP_410107.1| diaminopimelate epimerase [Shigella boydii Sb227]
ref|YP_405361.1| diaminopimelate epimerase [Shigella dysenteriae Sd197]
ref|ZP_00924581.1| COG0253: Diaminopimelate epimerase [Escherichia coli 101-1]
ref|YP_543320.1| diaminopimelate epimerase [Escherichia coli UTI89]
ref|YP_859391.1| diaminopimelate epimerase [Escherichia coli APEC O1]
pir||C91221 diaminopimelate epimerase [imported] - Escherichia coli (strain
O157:H7, substrain RIMD 0509952)
pir||F86067 diaminopimelate epimerase [imported] - Escherichia coli (strain
O157:H7, substrain EDL933)
gb|AAG59002.1|AE005612_5 diaminopimelate epimerase [Escherichia coli O157:H7 EDL933]
dbj|BAB38162.1| diaminopimelate epimerase [Escherichia coli O157:H7 str. Sakai]
gb|AAZ90505.1| diaminopimelate epimerase [Shigella sonnei Ss046]
gb|ABB63870.1| diaminopimelate epimerase [Shigella dysenteriae Sd197]
gb|ABB68279.1| diaminopimelate epimerase [Shigella boydii Sb227]
gb|ABE09789.1| diaminopimelate epimerase [Escherichia coli UTI89]
gb|ABJ03267.1| diaminopimelate epimerase [Escherichia coli APEC O1]
Length = 275
Score = 558 bits (1439), Expect = e-158
Identities = 274/274 (100%), Positives = 274/274 (100%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
Sbjct: 2 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
Sbjct: 62 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
Sbjct: 122 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
Sbjct: 182 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
Sbjct: 242 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 275
>gb|AAA67605.1| diaminopimelate epimerase [Escherichia coli]
Length = 275
Score = 556 bits (1434), Expect = e-157
Identities = 273/274 (99%), Positives = 273/274 (99%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
Sbjct: 2 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRV TANGRMVLTVTDDDLVRVNMGE
Sbjct: 62 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVXTANGRMVLTVTDDDLVRVNMGE 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
Sbjct: 122 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
Sbjct: 182 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
Sbjct: 242 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 275
>ref|ZP_00697834.1| COG0253: Diaminopimelate epimerase [Shigella boydii BS512]
Length = 275
Score = 556 bits (1434), Expect = e-157
Identities = 272/274 (99%), Positives = 274/274 (100%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLV+EPPYDPELDFHY
Sbjct: 2 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVIEPPYDPELDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
Sbjct: 62 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVS+GNPHCVIQVDDVDTAAVETLGPVLE
Sbjct: 122 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSIGNPHCVIQVDDVDTAAVETLGPVLE 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
Sbjct: 182 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
Sbjct: 242 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 275
>ref|YP_691020.1| diaminopimelate epimerase [Shigella flexneri 5 str. 8401]
gb|ABF05715.1| diaminopimelate epimerase [Shigella flexneri 5 str. 8401]
Length = 274
Score = 556 bits (1433), Expect = e-157
Identities = 273/274 (99%), Positives = 273/274 (99%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
Sbjct: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
Sbjct: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL EEVRV
Sbjct: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLDEEVRV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
Sbjct: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
>ref|NP_709616.1| diaminopimelate epimerase [Shigella flexneri 2a str. 301]
ref|NP_839066.1| diaminopimelate epimerase [Shigella flexneri 2a str. 2457T]
ref|ZP_00920811.1| COG0253: Diaminopimelate epimerase [Shigella dysenteriae 1012]
gb|AAN45323.1| diaminopimelate epimerase [Shigella flexneri 2a str. 301]
gb|AAP18877.1| diaminopimelate epimerase [Shigella flexneri 2a str. 2457T]
Length = 275
Score = 556 bits (1433), Expect = e-157
Identities = 273/274 (99%), Positives = 273/274 (99%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
Sbjct: 2 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
Sbjct: 62 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
Sbjct: 122 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL EEVRV
Sbjct: 182 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLDEEVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
Sbjct: 242 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 275
>ref|NP_756589.1| diaminopimelate epimerase [Escherichia coli CFT073]
gb|AAN83163.1|AE016769_278 Diaminopimelate epimerase [Escherichia coli CFT073]
Length = 275
Score = 556 bits (1432), Expect = e-157
Identities = 272/274 (99%), Positives = 273/274 (99%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSP+LIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
Sbjct: 2 MQFSKMHGLGNDFMVVDAVTQNVFFSPDLIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
Sbjct: 62 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEPSAVPFRANK EKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
Sbjct: 122 PNFEPSAVPFRANKVEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
Sbjct: 182 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
Sbjct: 242 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 275
>sp|Q8FBN6|DAPF_ECOL6 Diaminopimelate epimerase (DAP epimerase)
Length = 274
Score = 556 bits (1432), Expect = e-157
Identities = 272/274 (99%), Positives = 273/274 (99%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSP+LIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPDLIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
Sbjct: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEPSAVPFRANK EKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
Sbjct: 121 PNFEPSAVPFRANKVEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
Sbjct: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
Sbjct: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
>emb|CAA31413.1| unnamed protein product [Escherichia coli]
Length = 275
Score = 547 bits (1410), Expect = e-154
Identities = 269/274 (98%), Positives = 272/274 (99%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
Sbjct: 2 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRV+TANGRMVLTVTDDDLVRVNMGE
Sbjct: 62 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVTTANGRMVLTVTDDDLVRVNMGE 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPH +IQVDDVDTAAVETLGPVLE
Sbjct: 122 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHWLIQVDDVDTAAVETLGPVLE 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVVKR+ IRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
Sbjct: 182 SHERFPERANIGFMQVVKRDDIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
Sbjct: 242 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 275
>ref|NP_462832.1| diaminopimelate epimerase [Salmonella typhimurium LT2]
ref|YP_218833.1| diaminopimelate epimerase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gb|AAF33445.1| 98% identity with E. coli diaminopimelate epimerase (DAPF)
(SP:P08885) [Salmonella typhimurium LT2]
gb|AAL22791.1| diaminopimelate epimerase [Salmonella typhimurium LT2]
gb|AAX67752.1| diaminopimelate epimerase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
Length = 275
Score = 542 bits (1396), Expect = e-153
Identities = 262/274 (95%), Positives = 272/274 (99%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRL+DRHLGVGFDQLLVVEPPYDPELDFHY
Sbjct: 2 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL+VT+D+LVRVNMGE
Sbjct: 62 RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTEDELVRVNMGE 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEP+ VPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD+VDTAAVETLGPVLE
Sbjct: 122 PNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDNVDTAAVETLGPVLE 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVV+REHIRLRVYERGAGET+ACGSGACAAVAVGIQQGLLAEEVRV
Sbjct: 182 SHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGACAAVAVGIQQGLLAEEVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGGRLDIAWKGPGHPLYMTGPA H+YDGFIHL
Sbjct: 242 ELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFIHL 275
>ref|NP_457804.1| diaminopimelate epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
ref|NP_807018.1| diaminopimelate epimerase [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
ref|YP_152876.1| diaminopimelate epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
sp|P0A1F2|DAPF_SALTY Diaminopimelate epimerase (DAP epimerase)
sp|P0A1F3|DAPF_SALTI Diaminopimelate epimerase (DAP epimerase)
pir||AC0919 diaminopimelate epimerase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
emb|CAD09373.1| diaminopimelate epimerase [Salmonella enterica subsp. enterica
serovar Typhi]
gb|AAO70878.1| diaminopimelate epimerase [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
gb|AAV79564.1| diaminopimelate epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
Length = 274
Score = 542 bits (1396), Expect = e-153
Identities = 262/274 (95%), Positives = 272/274 (99%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRL+DRHLGVGFDQLLVVEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL+VT+D+LVRVNMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTEDELVRVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEP+ VPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD+VDTAAVETLGPVLE
Sbjct: 121 PNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDNVDTAAVETLGPVLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVV+REHIRLRVYERGAGET+ACGSGACAAVAVGIQQGLLAEEVRV
Sbjct: 181 SHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGACAAVAVGIQQGLLAEEVRV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGGRLDIAWKGPGHPLYMTGPA H+YDGFIHL
Sbjct: 241 ELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFIHL 274
>ref|ZP_01590960.1| diaminopimelate epimerase [Enterobacter sp. 638]
gb|EAV82822.1| diaminopimelate epimerase [Enterobacter sp. 638]
Length = 274
Score = 532 bits (1371), Expect = e-150
Identities = 256/274 (93%), Positives = 269/274 (98%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRH+GVGFDQLLVVEPPYDP+LDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHVGVGFDQLLVVEPPYDPDLDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFVRLKGLTNKRDI VSTANGRM+L+VTDD+LVRVNMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDICVSTANGRMILSVTDDELVRVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEPSAVPFRA KAEKTYIMRA+EQT+LCGVVSMGNPHCVIQVDDVDTAAVE LGP++E
Sbjct: 121 PNFEPSAVPFRAIKAEKTYIMRASEQTVLCGVVSMGNPHCVIQVDDVDTAAVEILGPIME 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQV+KREHIRLRVYERGAGET+ACGSGACAAVAVGI QGLLAEEVRV
Sbjct: 181 SHERFPERANIGFMQVMKREHIRLRVYERGAGETRACGSGACAAVAVGISQGLLAEEVRV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGGRLDIAWKGPGHPL+MTGPA HVYDGFIHL
Sbjct: 241 ELPGGRLDIAWKGPGHPLFMTGPAAHVYDGFIHL 274
>ref|ZP_01535620.1| diaminopimelate epimerase [Serratia proteamaculans 568]
gb|EAV32404.1| diaminopimelate epimerase [Serratia proteamaculans 568]
Length = 274
Score = 505 bits (1301), Expect = e-142
Identities = 245/274 (89%), Positives = 254/274 (92%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNV+FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVST GRMVL+VTDDDLV VNMGE
Sbjct: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNF+P VPFRA K EKTYIMRAAE T+LCGVVSMGNPHCV+QVDDV TA VE LGPVLE
Sbjct: 121 PNFDPQTVPFRATKEEKTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVKTAKVELLGPVLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFPERANIGFMQ+V REHI+LRVYERGAGETQACGSGACAAVAVGIQQ LL+EEV V
Sbjct: 181 GHERFPERANIGFMQIVSREHIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGG L I WKGPG PL+MTGPA HVYDGFIHL
Sbjct: 241 ELPGGSLHIRWKGPGSPLFMTGPATHVYDGFIHL 274
>ref|YP_001004580.1| diaminopimelate epimerase [Yersinia enterocolitica subsp.
enterocolitica 8081]
emb|CAL10328.1| diaminopimelate epimerase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 274
Score = 501 bits (1290), Expect = e-140
Identities = 242/274 (88%), Positives = 254/274 (92%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNV+FSPELIRRLADRH GVGFDQ+LVVEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFVRLKGLTNKRDI VST GRM+L+VT+D+LV VNMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDISVSTQTGRMILSVTEDELVCVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEP +VPFRA KAEKTYI+RAAE T+LCGVVSMGNPHCV+QVDDV A V LGPVLE
Sbjct: 121 PNFEPQSVPFRAAKAEKTYILRAAEHTVLCGVVSMGNPHCVMQVDDVSVANVALLGPVLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVV REHIRLRVYERGAGETQACGSGACAAVAVGIQQ LL EEV V
Sbjct: 181 SHERFPERANIGFMQVVSREHIRLRVYERGAGETQACGSGACAAVAVGIQQELLGEEVHV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGG L I+WKGPGHPLYMTGPA HVYDGFIHL
Sbjct: 241 ELPGGSLHISWKGPGHPLYMTGPATHVYDGFIHL 274
>ref|ZP_00833972.1| COG0253: Diaminopimelate epimerase [Yersinia intermedia ATCC 29909]
Length = 274
Score = 499 bits (1284), Expect = e-140
Identities = 241/274 (87%), Positives = 253/274 (92%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNV+FSPELIRRLADRH GVGFDQ+LVVEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFVRLKGLTNKRDI VST GRM+L+VT+D+LV VNMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDISVSTQTGRMILSVTEDELVCVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNF+P VPFRA KAEKTYI+RAAE T+LCGVVSMGNPHCV+QVDDV A V LGPVLE
Sbjct: 121 PNFDPQTVPFRATKAEKTYILRAAEHTVLCGVVSMGNPHCVMQVDDVSVANVALLGPVLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVV RE IRLRVYERGAGETQACGSGACAAVAVGIQQ LLAEEV V
Sbjct: 181 SHERFPERANIGFMQVVSREQIRLRVYERGAGETQACGSGACAAVAVGIQQELLAEEVHV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGG L I+WKGPGHPLYMTGPA HVYDGFIHL
Sbjct: 241 ELPGGSLHISWKGPGHPLYMTGPATHVYDGFIHL 274
>ref|ZP_00829175.1| COG0253: Diaminopimelate epimerase [Yersinia frederiksenii ATCC
33641]
Length = 274
Score = 498 bits (1281), Expect = e-139
Identities = 240/274 (87%), Positives = 253/274 (92%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNV+FSPELIRRLADRH GVGFDQ+LVVEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFVRLKGLTNKRDI VST GRM+L+VT+D+LV VNMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDISVSTQTGRMILSVTEDELVCVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNF+P VPFRA KAEKTYI+RAAE T+LCGVVSMGNPHCV+QVDDV A V LGP LE
Sbjct: 121 PNFDPQTVPFRAAKAEKTYILRAAEHTVLCGVVSMGNPHCVMQVDDVSVANVALLGPELE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVV REHIRLRVYERGAGETQACGSGACAAVAVGIQQ LL+EEV V
Sbjct: 181 SHERFPERANIGFMQVVSREHIRLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGG L I+WKGPGHPLYMTGPA HVYDGFIHL
Sbjct: 241 ELPGGSLHISWKGPGHPLYMTGPATHVYDGFIHL 274
>ref|YP_052270.1| diaminopimelate epimerase [Erwinia carotovora subsp. atroseptica
SCRI1043]
emb|CAG77080.1| diaminopimelate epimerase [Erwinia carotovora subsp. atroseptica
SCRI1043]
Length = 274
Score = 497 bits (1279), Expect = e-139
Identities = 240/274 (87%), Positives = 254/274 (92%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQF+KMHGLGNDFMVVDAVTQNV+FSPELIRRLADRH GVGFDQLLVVEPPYDPELDFHY
Sbjct: 1 MQFAKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHCGVGFDQLLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDI VST GRMVL+VTDD+LVRVNMGE
Sbjct: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIAVSTQTGRMVLSVTDDELVRVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEP VPFRA KAEKTYIMRA E T+LCGVVSMGNPHCVIQV+DV+TA VETLGP+LE
Sbjct: 121 PNFEPQQVPFRAVKAEKTYIMRADEHTVLCGVVSMGNPHCVIQVEDVETAKVETLGPLLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFP+RANIGFMQVV + +RLRVYERGAGETQACGSGACAAVAVGI QGLL+ +VRV
Sbjct: 181 SHERFPDRANIGFMQVVDSQTVRLRVYERGAGETQACGSGACAAVAVGILQGLLSAKVRV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
LPGG LDI W GPGHPL+MTGPA HVYDGFIHL
Sbjct: 241 SLPGGELDIQWDGPGHPLFMTGPATHVYDGFIHL 274
>ref|ZP_00821861.1| COG0253: Diaminopimelate epimerase [Yersinia bercovieri ATCC 43970]
Length = 274
Score = 493 bits (1269), Expect = e-138
Identities = 239/274 (87%), Positives = 253/274 (92%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNV+FSPELIRRLADRH GVGFDQ+LVVEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFVRLKGLTNKRDI VST GRM+L+VT+D+ V VNMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDISVSTQTGRMILSVTEDEEVCVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNF+P +VPFRA KAEKTYI RAAEQT+LCGVVSMGNPHCV+QVDDV A V LGPVLE
Sbjct: 121 PNFDPQSVPFRATKAEKTYIFRAAEQTVLCGVVSMGNPHCVLQVDDVAVANVALLGPVLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVV R++IRLRVYERGAGETQACGSGACAAVAVGIQQ LL EEV V
Sbjct: 181 SHERFPERANIGFMQVVSRDNIRLRVYERGAGETQACGSGACAAVAVGIQQDLLDEEVTV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGG L I+WKGPGHPLYMTGPA HVYDGFIHL
Sbjct: 241 ELPGGSLLISWKGPGHPLYMTGPATHVYDGFIHL 274
>ref|YP_456026.1| diaminopimelate epimerase [Sodalis glossinidius str. 'morsitans']
dbj|BAE75621.1| diaminopimelate epimerase [Sodalis glossinidius str. 'morsitans']
Length = 274
Score = 492 bits (1266), Expect = e-137
Identities = 237/274 (86%), Positives = 251/274 (91%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNV+FSPE+IRRL+DRH GVGFDQLLVVEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVYFSPEMIRRLSDRHCGVGFDQLLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVR+K LTNKRDI VST GRMVLTVT+DD VRVNMGE
Sbjct: 61 RIFNADGSEVAQCGNGARCFARFVRMKNLTNKRDIHVSTQTGRMVLTVTEDDSVRVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNF+P V FRA + EKTYIMRAAEQT+LCGVVSMGNPHCVI VD VD A V TLGPVLE
Sbjct: 121 PNFDPQQVLFRAARVEKTYIMRAAEQTVLCGVVSMGNPHCVIAVDSVDNAPVATLGPVLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQV+ R HIRLRVYERGAGETQACGSGACAAVAVGI QG LAE+V+V
Sbjct: 181 SHERFPERANIGFMQVLNRGHIRLRVYERGAGETQACGSGACAAVAVGISQGQLAEQVQV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
EL GGRL I+W+GPGHPLYMTGPA H+YDGFIHL
Sbjct: 241 ELTGGRLAISWRGPGHPLYMTGPATHIYDGFIHL 274
>ref|ZP_00823809.1| COG0253: Diaminopimelate epimerase [Yersinia mollaretii ATCC 43969]
Length = 276
Score = 488 bits (1256), Expect = e-136
Identities = 237/272 (87%), Positives = 250/272 (91%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNV+FSPELIRRLADRH GVGFDQ+LVVEPPYDPELDFHY
Sbjct: 5 MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY 64
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFVRLKGLTNKRDI VST GRM+L+VT+D+ V VNMGE
Sbjct: 65 RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDISVSTQTGRMILSVTEDEEVCVNMGE 124
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNF+P +VPFRA KAEKTYI RAAE T+LCGVVSMGNPHCV+QVDDV A V LGPVLE
Sbjct: 125 PNFDPQSVPFRATKAEKTYIFRAAEHTVLCGVVSMGNPHCVLQVDDVSVANVALLGPVLE 184
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQVV RE+IRLRVYERGAGETQACGSGACAAVAVGIQQ LL EEV V
Sbjct: 185 SHERFPERANIGFMQVVSRENIRLRVYERGAGETQACGSGACAAVAVGIQQELLDEEVTV 244
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272
ELPGG L I+WKGPGHPLYMTGPA HVYDGFI
Sbjct: 245 ELPGGSLLISWKGPGHPLYMTGPATHVYDGFI 276
>ref|NP_407293.1| diaminopimelate epimerase [Yersinia pestis CO92]
ref|NP_667723.1| diaminopimelate epimerase [Yersinia pestis KIM]
ref|NP_994493.1| diaminopimelate epimerase [Yersinia pestis biovar Microtus str.
91001]
ref|YP_068736.1| diaminopimelate epimerase [Yersinia pseudotuberculosis IP 32953]
ref|ZP_00795456.1| COG0253: Diaminopimelate epimerase [Yersinia pestis Angola]
ref|ZP_01176766.1| COG0253: Diaminopimelate epimerase [Yersinia pestis biovar
Orientalis str. IP275]
ref|YP_650091.1| diaminopimelate epimerase [Yersinia pestis Antiqua]
ref|YP_646052.1| diaminopimelate epimerase [Yersinia pestis Nepal516]
ref|ZP_01495086.1| hypothetical protein YpseI_02000186 [Yersinia pseudotuberculosis IP
31758]
sp|P46357|DAPF_YERPE Diaminopimelate epimerase (DAP epimerase)
gb|AAM83974.1|AE013639_3 diaminopimelate epimerase [Yersinia pestis KIM]
gb|AAS63370.1| diaminopimelate epimerase [Yersinia pestis biovar Microtus str.
91001]
emb|CAH19430.1| diaminopimelate epimerase [Yersinia pseudotuberculosis IP 32953]
gb|ABG16452.1| diaminopimelate epimerase [Yersinia pestis Nepal516]
gb|ABG12146.1| diaminopimelate epimerase [Yersinia pestis Antiqua]
emb|CAL22432.1| diaminopimelate epimerase [Yersinia pestis CO92]
Length = 274
Score = 485 bits (1248), Expect = e-135
Identities = 233/274 (85%), Positives = 249/274 (90%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNV+FSPELIRRLADRH GVGFDQ+LVVEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFVRLKGLTNKR+I VST GRM+L+VT+D+ V VNMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVRLKGLTNKREISVSTQTGRMILSVTEDEQVCVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P+FEP VPFRA KAEKTYI+RAAE T+LCGVVSMGNPHCV+QVDDV A V LGPVLE
Sbjct: 121 PDFEPQTVPFRAAKAEKTYILRAAEHTVLCGVVSMGNPHCVMQVDDVSVANVALLGPVLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+HERFPERANIGFMQVV R+HIRLRVYERGAGETQACGSGACAAVAVG+ Q LL E V V
Sbjct: 181 NHERFPERANIGFMQVVSRDHIRLRVYERGAGETQACGSGACAAVAVGVVQDLLNENVHV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGG L I W+GPGHPLYMTGPA HVYDGFIHL
Sbjct: 241 ELPGGSLHIRWQGPGHPLYMTGPATHVYDGFIHL 274
>ref|NP_931802.1| diaminopimelate epimerase [Photorhabdus luminescens subsp.
laumondii TTO1]
emb|CAE17012.1| diaminopimelate epimerase (DAP epimerase) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 274
Score = 468 bits (1204), Expect = e-130
Identities = 226/274 (82%), Positives = 245/274 (89%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNV+FSPELI RLADRH GVGFDQLL+VE PYDP++DFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVYFSPELICRLADRHTGVGFDQLLIVEAPYDPDMDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFVRLKGL NKRDI+VST +GRMVL++T+DD V VNMGE
Sbjct: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLINKRDIKVSTQSGRMVLSITNDDQVCVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP VPFRA +AEKTYI+R AE+T+LCGVVSMGNPHCVIQV DV+TA V+ LGP LE
Sbjct: 121 PEFEPHHVPFRALRAEKTYILRVAERTVLCGVVSMGNPHCVIQVPDVETAEVDILGPALE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPERANIGFMQ++ R HIRLRVYERG GETQACGSGACAAVAVGIQQ LL VRV
Sbjct: 181 SHERFPERANIGFMQILNRGHIRLRVYERGVGETQACGSGACAAVAVGIQQQLLDNHVRV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W GPG PLYMTGPA+HVYDG IHL
Sbjct: 241 DLPGGSLFICWDGPGKPLYMTGPAMHVYDGTIHL 274
>ref|NP_438909.1| diaminopimelate epimerase [Haemophilus influenzae Rd KW20]
ref|YP_248459.1| diaminopimelate epimerase [Haemophilus influenzae 86-028NP]
sp|P44859|DAPF_HAEIN Diaminopimelate epimerase (DAP epimerase)
pdb|1GQZ|A Chain A, Refinement Of Haemophilus Influenzae Diaminopimelate
Epimerase At 1.7a
pdb|2GKE|A Chain A, Crystal Structure Of Diaminopimelate Epimerase In Complex
With An Irreversible Inhibitor Ll-Azidap
pdb|2GKJ|A Chain A, Crystal Structure Of Diaminopimelate Epimerase In Complex
With An Irreversible Inhibitor Dl-Azidap
gb|AAC22409.1| diaminopimelate epimerase (dapF) [Haemophilus influenzae Rd KW20]
gb|AAX87799.1| diaminopimelate epimerase [Haemophilus influenzae 86-028NP]
Length = 274
Score = 449 bits (1155), Expect = e-125
Identities = 212/274 (77%), Positives = 236/274 (86%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDF+VVD VTQNVFF+PE IRRLA+RH G+GFDQLL+VE PYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFV LKGLTNK+DI VST G MVLTV DD+ +RVNMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +EP+ +PF ANK EK YI+R QT+LCG VSMGNPHCV+QVDD+ TA VE LGP+LE
Sbjct: 121 PIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGPLLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPER N GFMQ++ +EHI+LRVYERGAGETQACGSGACAAVAVGI QGLL V+V
Sbjct: 181 SHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W G GHPLYMTG A H+YDGFI L
Sbjct: 241 DLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL 274
>pdb|1BWZ|A Chain A, Diaminopimelate Epimerase From Hemophilus Influenzae
Length = 274
Score = 446 bits (1146), Expect = e-124
Identities = 211/274 (77%), Positives = 235/274 (85%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDF+VVD VTQNVFF+PE IRRLA+RH G+GFDQLL+VE PYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFV LKGLTNK+DI VST G MVLTV D + +RVNMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDMNQIRVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +EP+ +PF ANK EK YI+R QT+LCG VSMGNPHCV+QVDD+ TA VE LGP+LE
Sbjct: 121 PIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGPLLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPER N GFMQ++ +EHI+LRVYERGAGETQACGSGACAAVAVGI QGLL V+V
Sbjct: 181 SHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W G GHPLYMTG A H+YDGFI L
Sbjct: 241 DLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL 274
>ref|ZP_00135025.2| COG0253: Diaminopimelate epimerase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 274
Score = 444 bits (1143), Expect = e-123
Identities = 210/274 (76%), Positives = 238/274 (86%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMV+D VTQNV+ + E+IR+LADRH GVGFDQLL+VEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVIDGVTQNVYLTEEVIRKLADRHRGVGFDQLLLVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFV LKGLTNK+DI VSTA G+MVLT+ D++ VRVNMGE
Sbjct: 61 RIFNADGSEVAQCGNGARCFARFVTLKGLTNKQDIHVSTAKGKMVLTLKDEEKVRVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +EP+ VPF ANK EK YI+R QT+LCGVVSMGNPHCV+QV+D++ V LGP+LE
Sbjct: 121 PIWEPAQVPFTANKFEKNYILRTDLQTVLCGVVSMGNPHCVLQVEDINLTPVNELGPLLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+HERFPERANIGFMQVV R HI+LRV+ERGAGETQACGSGAC AVAVGI QG+L V+V
Sbjct: 181 NHERFPERANIGFMQVVNRNHIKLRVFERGAGETQACGSGACGAVAVGIMQGVLDNNVQV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G GHPLYMTG A H+YDGFI L
Sbjct: 241 DLPGGSLQIEWEGVGHPLYMTGDATHIYDGFIKL 274
>ref|NP_229784.1| diaminopimelate epimerase [Vibrio cholerae O1 biovar eltor str.
N16961]
pir||G82360 diaminopimelate epimerase VC0126 [imported] - Vibrio cholerae
(strain N16961 serogroup O1)
gb|AAF93303.1| diaminopimelate epimerase [Vibrio cholerae O1 biovar eltor str.
N16961]
Length = 290
Score = 443 bits (1139), Expect = e-123
Identities = 212/270 (78%), Positives = 231/270 (85%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
FSKMHGLGNDFMVVD +TQNVFFSPELIRRLADRH GVGFDQLLVVE PYDPE DFHYRI
Sbjct: 19 FSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRI 78
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FNADGSEV QCGNGARCFARFVR+KGLTNK I VST G+MVL V ++DL+ VNMG P
Sbjct: 79 FNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVPE 138
Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182
FEP+ +PFRA ++EKTYI+R E T+ CG VSMGNPH V VDD+ TAAVETLGP+LESH
Sbjct: 139 FEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLLESH 198
Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242
ERFPER N GFMQVV R+ I LRVYERGAGETQACGSGACAAVAVGI QGLL E+VRV L
Sbjct: 199 ERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQVRVHL 258
Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272
PGG L+I W+GPG PLYMTGPA H+YDG I
Sbjct: 259 PGGELEIHWQGPGKPLYMTGPATHIYDGQI 288
>ref|ZP_01677496.1| diaminopimelate epimerase [Vibrio cholerae 2740-80]
ref|ZP_01681343.1| diaminopimelate epimerase [Vibrio cholerae V52]
sp|Q9KVL6|DAPF_VIBCH Diaminopimelate epimerase (DAP epimerase)
gb|EAX58112.1| diaminopimelate epimerase [Vibrio cholerae 2740-80]
gb|EAX61871.1| diaminopimelate epimerase [Vibrio cholerae V52]
gb|EAY33914.1| diaminopimelate epimerase [Vibrio cholerae 1587]
gb|EAY36724.1| diaminopimelate epimerase [Vibrio cholerae MAK 757]
gb|EAY40139.1| diaminopimelate epimerase [Vibrio cholerae MZO-3]
Length = 276
Score = 443 bits (1139), Expect = e-123
Identities = 212/270 (78%), Positives = 231/270 (85%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
FSKMHGLGNDFMVVD +TQNVFFSPELIRRLADRH GVGFDQLLVVE PYDPE DFHYRI
Sbjct: 5 FSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRI 64
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FNADGSEV QCGNGARCFARFVR+KGLTNK I VST G+MVL V ++DL+ VNMG P
Sbjct: 65 FNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVPE 124
Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182
FEP+ +PFRA ++EKTYI+R E T+ CG VSMGNPH V VDD+ TAAVETLGP+LESH
Sbjct: 125 FEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLLESH 184
Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242
ERFPER N GFMQVV R+ I LRVYERGAGETQACGSGACAAVAVGI QGLL E+VRV L
Sbjct: 185 ERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQVRVHL 244
Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272
PGG L+I W+GPG PLYMTGPA H+YDG I
Sbjct: 245 PGGELEIHWQGPGKPLYMTGPATHIYDGQI 274
>ref|NP_246642.1| diaminopimelate epimerase [Pasteurella multocida subsp. multocida
str. Pm70]
sp|P57962|DAPF_PASMU Diaminopimelate epimerase (DAP epimerase)
gb|AAK03787.1| DapF [Pasteurella multocida subsp. multocida str. Pm70]
Length = 274
Score = 440 bits (1131), Expect = e-122
Identities = 202/274 (73%), Positives = 239/274 (87%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDF+VVDA+TQN++FSPE I+RLADRH G+GFDQ+L+VEPPYDP+LDFHY
Sbjct: 1 MQFSKMHGLGNDFVVVDAITQNLYFSPETIKRLADRHRGIGFDQMLIVEPPYDPDLDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFV LKGLT+K+DI VST G+M+L++ DD ++R+NMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVTLKGLTDKKDIAVSTQTGKMILSIKDDGMIRINMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +EP+ +PF ANK EK YI+R + QT+LCG VSMGNPHCV+QVDD+ TA VE LGP+LE
Sbjct: 121 PIWEPAKIPFTANKFEKNYILRTSIQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGPLLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+HERFPER N GFMQV+ R HI+LRVYERGAGETQACGSGACAAVAVG+ QGLL +V+V
Sbjct: 181 NHERFPERVNAGFMQVIHRGHIKLRVYERGAGETQACGSGACAAVAVGVMQGLLDSKVQV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G G PL+MTG A HVYDG I L
Sbjct: 241 DLPGGSLIIEWEGVGKPLFMTGDATHVYDGVIRL 274
>ref|ZP_00156607.2| COG0253: Diaminopimelate epimerase [Haemophilus influenzae R2866]
Length = 269
Score = 439 bits (1130), Expect = e-122
Identities = 207/269 (76%), Positives = 231/269 (85%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHGLGNDF+VVD VTQNVFF+PE IRRLA+RH G+GFDQLL+VE PYDPELDFHYRIFNA
Sbjct: 1 MHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHYRIFNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DGSEV+QCGNGARCFARFV LKGLTNK+DI VST G MVLTV DD+ +RVNMGEP +EP
Sbjct: 61 DGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGEPIWEP 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
+ +PF ANK EK YI+R QT+LCG VSMGNPHCV+QVDD+ TA VE LGP+LESHERF
Sbjct: 121 AKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGPLLESHERF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245
PER N GFMQ++ +EHI+LRVYERGAGETQACGSGACAAVAVGI QGLL V+V+LPGG
Sbjct: 181 PERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQVDLPGG 240
Query: 246 RLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L I W G GHPLYMTG A H+YDGFI L
Sbjct: 241 SLMIEWNGVGHPLYMTGEATHIYDGFITL 269
>ref|YP_088976.1| diaminopimelate epimerase [Mannheimia succiniciproducens MBEL55E]
gb|AAU38391.1| DapF protein [Mannheimia succiniciproducens MBEL55E]
Length = 274
Score = 439 bits (1129), Expect = e-122
Identities = 205/274 (74%), Positives = 236/274 (86%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDF+VVDAVTQNV+F E+I++LADRH G+GFDQ+L+VEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFVVVDAVTQNVYFPEEVIKKLADRHRGIGFDQMLIVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFV LKGLT+K+DI VST NG+M+LTV DD ++RVNMGE
Sbjct: 61 RIFNADGSEVAQCGNGARCFARFVTLKGLTDKKDIAVSTTNGKMILTVQDDGMIRVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +EP+ +PF ANK EK YI+R QT+LCG VSMGNPHC + VDDV+TA V LGP+LE
Sbjct: 121 PVWEPAKIPFIANKFEKNYILRTDIQTVLCGAVSMGNPHCTLVVDDVETANVTELGPLLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+HERFPER N+GFMQV+ HI+LRVYERGAGETQACGSGACAA A+GI QGLL +V+V
Sbjct: 181 NHERFPERVNVGFMQVINPNHIKLRVYERGAGETQACGSGACAAAAIGIMQGLLENKVQV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G GHPLYMTG A HVYDG I L
Sbjct: 241 DLPGGSLWIEWQGEGHPLYMTGDATHVYDGVIKL 274
>ref|ZP_01482466.1| hypothetical protein VchoR_02001622 [Vibrio cholerae RC385]
Length = 269
Score = 439 bits (1128), Expect = e-121
Identities = 210/267 (78%), Positives = 229/267 (85%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHGLGNDFMVVD +TQNVFFSPELIRRLADRH GVGFDQLLVVE PYDPE DFHYRIFNA
Sbjct: 1 MHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRIFNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DGSEV QCGNGARCFARFVR+KGLTNK I VST G+MVL V ++DL+ VNMG P FEP
Sbjct: 61 DGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVPEFEP 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
+ +PFRA ++EKTYI+RA E T+ CG VSMGNPH V VDD+ TAAVETLGP+LESHERF
Sbjct: 121 NKIPFRAKQSEKTYILRAGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLLESHERF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245
PER N GFMQVV R+ I LRVYERGAGETQACGSGACAAVAVGI QGLL E+VRV LPGG
Sbjct: 181 PERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQVRVHLPGG 240
Query: 246 RLDIAWKGPGHPLYMTGPAVHVYDGFI 272
L+I W+GPG PLYMTGPA H+YDG I
Sbjct: 241 ELEIHWQGPGKPLYMTGPATHIYDGQI 267
>ref|ZP_00757472.1| COG0253: Diaminopimelate epimerase [Vibrio cholerae O395]
ref|ZP_01478056.1| hypothetical protein VchoM_02002806 [Vibrio cholerae MO10]
Length = 269
Score = 437 bits (1124), Expect = e-121
Identities = 209/267 (78%), Positives = 228/267 (85%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHGLGNDFMVVD +TQNVFFSPELIRRLADRH GVGFDQLLVVE PYDPE DFHYRIFNA
Sbjct: 1 MHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRIFNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DGSEV QCGNGARCFARFVR+KGLTNK I VST G+MVL V ++DL+ VNMG P FEP
Sbjct: 61 DGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVPEFEP 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
+ +PFRA ++EKTYI+R E T+ CG VSMGNPH V VDD+ TAAVETLGP+LESHERF
Sbjct: 121 NKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLLESHERF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245
PER N GFMQVV R+ I LRVYERGAGETQACGSGACAAVAVGI QGLL E+VRV LPGG
Sbjct: 181 PERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQVRVHLPGG 240
Query: 246 RLDIAWKGPGHPLYMTGPAVHVYDGFI 272
L+I W+GPG PLYMTGPA H+YDG I
Sbjct: 241 ELEIHWQGPGKPLYMTGPATHIYDGQI 267
>ref|ZP_00131822.2| COG0253: Diaminopimelate epimerase [Haemophilus somnus 2336]
Length = 274
Score = 437 bits (1124), Expect = e-121
Identities = 206/274 (75%), Positives = 237/274 (86%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDF+VVDAVTQN++F E+I+RLADR+ G+GFDQLLVVEPPYDP+LDFHY
Sbjct: 1 MQFSKMHGLGNDFVVVDAVTQNIYFPTEVIKRLADRNRGIGFDQLLVVEPPYDPDLDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFV LKGLTNK++I VSTA G+M+L V DDD+V VNMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVVLKGLTNKKEIAVSTAKGKMMLCVKDDDMVCVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +EP+ +PF ANK EK YI+R QT+LCGVVSMGNPHCV QV+D+ A +E LGP+LE
Sbjct: 121 PIWEPNKIPFNANKFEKNYIIRTDIQTLLCGVVSMGNPHCVTQVEDIQHANIEILGPLLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPER N GFMQ++ R HI+LRVYERGAGETQACGSGACAAVAVGI QG+L V+V
Sbjct: 181 SHERFPERVNAGFMQIINRNHIKLRVYERGAGETQACGSGACAAVAVGIMQGVLGSCVQV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W+G GHPLYMTG A H+YDG I L
Sbjct: 241 DLPGGRLMIEWQGKGHPLYMTGEATHIYDGVIRL 274
>ref|ZP_01261866.1| diaminopimelate epimerase [Vibrio alginolyticus 12G01]
gb|EAS74845.1| diaminopimelate epimerase [Vibrio alginolyticus 12G01]
Length = 276
Score = 436 bits (1122), Expect = e-121
Identities = 209/268 (77%), Positives = 227/268 (84%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
FSKMHGLGNDFMVVD +TQNVFFS +LIRRLADRH GVGFDQLLVVE PYDPE DFHYRI
Sbjct: 5 FSKMHGLGNDFMVVDCITQNVFFSQDLIRRLADRHTGVGFDQLLVVEAPYDPETDFHYRI 64
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FNADGSEV QCGNGARCFARFVRLKGLTNK I VST G+M+L + DD V VNMG P
Sbjct: 65 FNADGSEVEQCGNGARCFARFVRLKGLTNKYSISVSTKKGKMILNIEDDGEVTVNMGVPE 124
Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182
FEP+ +PF+A + EKTYIMRA + T+ CG VSMGNPH V VDDVDTA VETLGP+LESH
Sbjct: 125 FEPNKIPFKAKQKEKTYIMRAGDNTLFCGAVSMGNPHVVTVVDDVDTAEVETLGPLLESH 184
Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242
ERFPER N GFMQV+ R+HIRLRVYERGAGETQACGSGACAAVAVGI QGLL E V+V L
Sbjct: 185 ERFPERVNAGFMQVMSRDHIRLRVYERGAGETQACGSGACAAVAVGILQGLLDENVKVSL 244
Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
PGG L IAW+GPG PL+MTGP HV+DG
Sbjct: 245 PGGELRIAWQGPGKPLFMTGPTTHVFDG 272
>ref|YP_719815.1| diaminopimelate epimerase [Haemophilus somnus 129PT]
gb|ABI25878.1| diaminopimelate epimerase [Haemophilus somnus 129PT]
Length = 274
Score = 436 bits (1122), Expect = e-121
Identities = 206/274 (75%), Positives = 237/274 (86%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDF+VVDAVTQNV+F E+I+RLADR+ G+GFDQLLVVEPPYDP+LDFHY
Sbjct: 1 MQFSKMHGLGNDFVVVDAVTQNVYFPTEVIKRLADRNRGIGFDQLLVVEPPYDPDLDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFV LKGLT+K++I VSTA G+M+L V DDD+V VNMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVVLKGLTDKKEIAVSTAKGKMMLRVKDDDMVCVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +EP+ +PF ANK EK YI+R QT+LCGVVSMGNPHCV QV+D+ A +E LGP+LE
Sbjct: 121 PIWEPNKIPFNANKFEKNYIIRTDIQTLLCGVVSMGNPHCVTQVEDIQHANIEILGPLLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPER N GFMQ++ R HI+LRVYERGAGETQACGSGACAAVAVGI QG+L V+V
Sbjct: 181 SHERFPERVNAGFMQIINRNHIKLRVYERGAGETQACGSGACAAVAVGIMQGVLDNNVQV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W+G GHPLYMTG A H+YDG I L
Sbjct: 241 DLPGGRLMIEWQGKGHPLYMTGEATHIYDGVIRL 274
>ref|NP_799362.1| diaminopimelate epimerase [Vibrio parahaemolyticus RIMD 2210633]
sp|Q87KJ4|DAPF_VIBPA Diaminopimelate epimerase (DAP epimerase)
dbj|BAC61246.1| diaminopimelate epimerase [Vibrio parahaemolyticus RIMD 2210633]
Length = 276
Score = 436 bits (1120), Expect = e-121
Identities = 209/268 (77%), Positives = 228/268 (85%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
FSKMHGLGNDFMVVD +TQNVFFS +LIRRLADRH GVGFDQLLVVE PYDPE DFHYRI
Sbjct: 5 FSKMHGLGNDFMVVDCITQNVFFSQDLIRRLADRHTGVGFDQLLVVEAPYDPETDFHYRI 64
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FNADGSEV QCGNGARCFARFVRLKGLTNK I VST G+M+L V DD V VNMG P
Sbjct: 65 FNADGSEVEQCGNGARCFARFVRLKGLTNKYSISVSTKKGKMILDVEDDGEVTVNMGVPE 124
Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182
FEP+ +PF+A + EKTYIMRA ++T+ CG VSMGNPH V VDDVDTA V+TLGP+LESH
Sbjct: 125 FEPNKIPFKAKQKEKTYIMRAGDKTLFCGAVSMGNPHVVTVVDDVDTADVDTLGPLLESH 184
Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242
ERFPER N GFMQVV R+HIRLRVYERGAGETQACGSGAC AVAVGI QGLL E V+V L
Sbjct: 185 ERFPERVNAGFMQVVSRDHIRLRVYERGAGETQACGSGACGAVAVGILQGLLDESVKVSL 244
Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
PGG L I+W+GPG PL+MTGPA HV+DG
Sbjct: 245 PGGELHISWQGPGKPLFMTGPATHVFDG 272
>ref|ZP_01485780.1| hypothetical protein VchoV5_02001611 [Vibrio cholerae V51]
Length = 278
Score = 435 bits (1119), Expect = e-120
Identities = 207/265 (78%), Positives = 226/265 (85%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHGLGNDFMVVD +TQNVFFSPELIRRLADRH GVGFDQLLVVE PYDPE DFHYRIFNA
Sbjct: 1 MHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRIFNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DGSEV QCGNGARCFARFVR+KGLTNK I VST G+MVL V ++DL+ VNMG P FEP
Sbjct: 61 DGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVPEFEP 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
+ +PFRA ++EKTYI+R E T+ CG VSMGNPH V VDD+ TAAVETLGP+LESHERF
Sbjct: 121 NKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLLESHERF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245
PER N GFMQVV R+ I LRVYERGAGETQACGSGAC AVAVGI QGLL E+VRV LPGG
Sbjct: 181 PERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACGAVAVGILQGLLDEQVRVHLPGG 240
Query: 246 RLDIAWKGPGHPLYMTGPAVHVYDG 270
L+I W+GPG PLYMTGPA H+YDG
Sbjct: 241 ELEIHWQGPGKPLYMTGPATHIYDG 265
>ref|ZP_00154344.2| COG0253: Diaminopimelate epimerase [Haemophilus influenzae R2846]
Length = 269
Score = 435 bits (1119), Expect = e-120
Identities = 205/269 (76%), Positives = 230/269 (85%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHGLGNDF+VVD VTQNVFF+PE IRRLA+RH G+GFDQLL+VE PYDPELDFHYRIFNA
Sbjct: 1 MHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHYRIFNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DGSEV+QCGNGARCFARFV LKGLTNK+DI VST G MVLTV DD+ +RVNMGEP +EP
Sbjct: 61 DGSEVSQCGNGARCFARFVTLKGLTNKKDIAVSTQKGNMVLTVKDDNQIRVNMGEPIWEP 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
+ +PF ANK EK YI+R QT+LCG VSMGNPHCV+QVDD+ TA VE LG +LE+HERF
Sbjct: 121 AKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGSLLENHERF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245
PER N GFMQ++ +EHI+LRVYERGAGETQACGSGACAAVAVGI QGLL V+V+LPGG
Sbjct: 181 PERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQVDLPGG 240
Query: 246 RLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L I W G GHPLYMTG A H+YDGFI L
Sbjct: 241 SLMIEWNGVGHPLYMTGEATHIYDGFITL 269
>ref|ZP_00992313.1| diaminopimelate epimerase [Vibrio splendidus 12B01]
gb|EAP92731.1| diaminopimelate epimerase [Vibrio splendidus 12B01]
Length = 276
Score = 434 bits (1115), Expect = e-120
Identities = 205/268 (76%), Positives = 226/268 (84%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
FSKMHGLGNDFMVVD +TQN+FFSP+LIRRLADRH GVGFDQLLVVE PYDPE DFHYRI
Sbjct: 5 FSKMHGLGNDFMVVDCITQNIFFSPDLIRRLADRHTGVGFDQLLVVEAPYDPETDFHYRI 64
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FNADGSEV QCGNGARCFARFVR+KGLTNK I VST G+MVL + D+D + VNMG P
Sbjct: 65 FNADGSEVEQCGNGARCFARFVRMKGLTNKYSINVSTKKGKMVLKIEDNDQITVNMGIPE 124
Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182
FEP +PF+A + EKTYI+R T+ CG VSMGNPH V VDDVDTA VETLGP+LESH
Sbjct: 125 FEPGKIPFKAKQPEKTYILRTDVHTLFCGAVSMGNPHVVTVVDDVDTADVETLGPLLESH 184
Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242
ERFPER N GFMQV+ RE +RLRVYERGAGETQACGSGAC AVAVGI QGLLAE V+V L
Sbjct: 185 ERFPERVNAGFMQVINREEVRLRVYERGAGETQACGSGACGAVAVGINQGLLAENVKVRL 244
Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
PGG L I+W+GPG PL+MTGPA HV+DG
Sbjct: 245 PGGDLQISWQGPGKPLFMTGPATHVFDG 272
>ref|NP_932880.1| diaminopimelate epimerase [Vibrio vulnificus YJ016]
sp|Q8DD81|DAPF_VIBVU Diaminopimelate epimerase (DAP epimerase)
sp|Q7MQC1|DAPF_VIBVY Diaminopimelate epimerase (DAP epimerase)
dbj|BAC92851.1| diaminopimelate epimerase [Vibrio vulnificus YJ016]
Length = 276
Score = 433 bits (1114), Expect = e-120
Identities = 209/268 (77%), Positives = 225/268 (83%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
FSKMHGLGNDFMVVD +TQNV+FS ELIRRLADRH GVGFDQLLVVE PYDPE DFHYRI
Sbjct: 5 FSKMHGLGNDFMVVDCITQNVYFSQELIRRLADRHTGVGFDQLLVVEAPYDPETDFHYRI 64
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FNADGSEV QCGNGARCFARFVR+KGLTNK I VST G+M+L V +DD + VNMG P
Sbjct: 65 FNADGSEVEQCGNGARCFARFVRMKGLTNKYSISVSTKKGKMILDVEEDDQITVNMGVPE 124
Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182
FEP+ +PFRA + EKTYIMR E+T+ CG VSMGNPH V VDDVD+A VETLGP+LESH
Sbjct: 125 FEPNKIPFRAKQKEKTYIMRVGEKTLFCGAVSMGNPHVVTVVDDVDSAEVETLGPLLESH 184
Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242
ERFPER N GFMQVV RE IRLRVYERGAGETQACGSGAC AVAVGI QGLL E V V L
Sbjct: 185 ERFPERVNAGFMQVVNREQIRLRVYERGAGETQACGSGACGAVAVGILQGLLDENVTVSL 244
Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
PGG L I W+GPG PLYMTGPA HV+DG
Sbjct: 245 PGGDLHIHWQGPGKPLYMTGPATHVFDG 272
>ref|ZP_01066470.1| diaminopimelate epimerase [Vibrio sp. MED222]
gb|EAQ52179.1| diaminopimelate epimerase [Vibrio sp. MED222]
Length = 276
Score = 433 bits (1113), Expect = e-120
Identities = 206/268 (76%), Positives = 226/268 (84%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
FSKMHGLGNDFMVVD +TQN+FFSP+LIRRLADRH GVGFDQLLVVE PYDPE DFHYRI
Sbjct: 5 FSKMHGLGNDFMVVDCITQNIFFSPDLIRRLADRHTGVGFDQLLVVEAPYDPETDFHYRI 64
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FNADGSEV QCGNGARCFARFVR+KGLTNK I VST G+MVL + D+DL+ VNMG P
Sbjct: 65 FNADGSEVEQCGNGARCFARFVRMKGLTNKYSINVSTKKGKMVLKIEDNDLITVNMGIPE 124
Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182
FEP +PF+A + EKTYI+R T+ CG VSMGNPH V VDDVDTA V+TLGP+LESH
Sbjct: 125 FEPGKIPFKAKQPEKTYILRTDVHTLFCGAVSMGNPHVVTVVDDVDTADVDTLGPLLESH 184
Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242
ERFPER N GFMQVV RE +RLRVYERGAGETQACGSGAC AVAVGI QGLLAE V+V L
Sbjct: 185 ERFPERVNAGFMQVVNREEVRLRVYERGAGETQACGSGACGAVAVGITQGLLAENVKVRL 244
Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
PGG L I+W+GPG PL MTGPA HV+DG
Sbjct: 245 PGGDLHISWQGPGKPLLMTGPATHVFDG 272
>ref|ZP_01474765.1| hypothetical protein VEx2w_02002631 [Vibrio sp. Ex25]
Length = 269
Score = 432 bits (1110), Expect = e-119
Identities = 207/265 (78%), Positives = 225/265 (84%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHGLGNDFMVVD +TQNVFFS +LIRRLADRH GVGFDQLLVVE PYDPE DFHYRIFNA
Sbjct: 1 MHGLGNDFMVVDCITQNVFFSQDLIRRLADRHTGVGFDQLLVVEAPYDPETDFHYRIFNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DGSEV QCGNGARCFARFVRLKGLTNK I VST G+M+L + DD V VNMG P FEP
Sbjct: 61 DGSEVEQCGNGARCFARFVRLKGLTNKYSISVSTKKGKMILNIEDDGEVTVNMGVPEFEP 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
+ +PF+A + EKTYIMRA E+T+ CG VSMGNPH V VDDVDTA V+TLGP+LESHERF
Sbjct: 121 NKIPFKAKQKEKTYIMRAGEKTLFCGAVSMGNPHVVTVVDDVDTADVDTLGPLLESHERF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245
PER N GFMQVV R+HIRLRVYERGAGETQACGSGACAAVAVGI QGLL E V+V LPGG
Sbjct: 181 PERVNAGFMQVVSRDHIRLRVYERGAGETQACGSGACAAVAVGILQGLLDENVKVSLPGG 240
Query: 246 RLDIAWKGPGHPLYMTGPAVHVYDG 270
L IAW+GPG PL+MTGP HV+DG
Sbjct: 241 ELRIAWQGPGKPLFMTGPTTHVFDG 265
>ref|NP_872655.1| diaminopimelate epimerase [Haemophilus ducreyi 35000HP]
sp|Q7VPN0|DAPF_HAEDU Diaminopimelate epimerase (DAP epimerase)
gb|AAP95044.1| diaminopimelate epimerase [Haemophilus ducreyi 35000HP]
Length = 274
Score = 428 bits (1100), Expect = e-118
Identities = 200/274 (72%), Positives = 232/274 (84%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMV+D VTQNV+ + ++IR+LADRH GVGFDQLL+VEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVIDGVTQNVYLTEDMIRKLADRHYGVGFDQLLLVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFARFV LKGL N+ D+ VSTA G+MVLT+ D++ VRVNMGE
Sbjct: 61 RIFNADGSEVAQCGNGARCFARFVSLKGLINRSDMYVSTAKGKMVLTLVDEENVRVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +EP+ +PF ANK EK YI+R QT+LCGVVSMGNPHCV+QVDD++ A V LG +LE
Sbjct: 121 PIWEPAKIPFIANKFEKNYILRTDLQTVLCGVVSMGNPHCVLQVDDIEQATVHQLGALLE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFPERAN+GFMQ++ R HI+LRV+ERG GET+ACGSGACAAVAVGI QG+L V+V
Sbjct: 181 KHHRFPERANVGFMQIIDRHHIKLRVFERGVGETKACGSGACAAVAVGIMQGVLDANVQV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
LPGG L I W+G G PLYMTG A H+YDGFI L
Sbjct: 241 SLPGGTLQIEWQGKGKPLYMTGTATHIYDGFIKL 274
>ref|NP_760075.1| diaminopimelate epimerase [Vibrio vulnificus CMCP6]
gb|AAO09602.1|AE016800_207 Diaminopimelate epimerase [Vibrio vulnificus CMCP6]
Length = 269
Score = 427 bits (1099), Expect = e-118
Identities = 206/265 (77%), Positives = 222/265 (83%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHGLGNDFMVVD +TQNV+FS ELIRRLADRH GVGFDQLLVVE PYDPE DFHYRIFNA
Sbjct: 1 MHGLGNDFMVVDCITQNVYFSQELIRRLADRHTGVGFDQLLVVEAPYDPETDFHYRIFNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DGSEV QCGNGARCFARFVR+KGLTNK I VST G+M+L V +DD + VNMG P FEP
Sbjct: 61 DGSEVEQCGNGARCFARFVRMKGLTNKYSISVSTKKGKMILDVEEDDQITVNMGVPEFEP 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
+ +PFRA + EKTYIMR E+T+ CG VSMGNPH V VDDVD+A VETLGP+LESHERF
Sbjct: 121 NKIPFRAKQKEKTYIMRVGEKTLFCGAVSMGNPHVVTVVDDVDSAEVETLGPLLESHERF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245
PER N GFMQVV RE IRLRVYERGAGETQACGSGAC AVAVGI QGLL E V V LPGG
Sbjct: 181 PERVNAGFMQVVNREQIRLRVYERGAGETQACGSGACGAVAVGILQGLLDENVTVSLPGG 240
Query: 246 RLDIAWKGPGHPLYMTGPAVHVYDG 270
L I W+GPG PLYMTGPA HV+DG
Sbjct: 241 DLHIHWQGPGKPLYMTGPATHVFDG 265
>ref|ZP_01222226.1| diaminopimelate epimerase [Photobacterium profundum 3TCK]
gb|EAS41234.1| diaminopimelate epimerase [Photobacterium profundum 3TCK]
Length = 276
Score = 424 bits (1090), Expect = e-117
Identities = 204/274 (74%), Positives = 225/274 (82%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGLGNDFMVVD VTQNVFFSP+ IRRLADRH G+GFDQLLVVEPPYDPE DFHY
Sbjct: 3 INFSKMHGLGNDFMVVDCVTQNVFFSPDAIRRLADRHRGIGFDQLLVVEPPYDPETDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV +KGLTNK + VST G+M+L + +D+ V VNMG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVWMKGLTNKYQVAVSTKAGKMLLKLENDNQVTVNMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEPS +PFRA + EKTYIMR E+TI CGVVSMGNPHCV VDD+D VETLGP++E
Sbjct: 123 PEFEPSKIPFRAKQTEKTYIMRVGERTIFCGVVSMGNPHCVTVVDDLDLTGVETLGPLIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPER N GFMQVV R ++LRVYERGAGETQACGSGACAAVAVG QGLL E V+V
Sbjct: 183 SHERFPERVNAGFMQVVSRNEVKLRVYERGAGETQACGSGACAAVAVGYLQGLLDENVKV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
LPGG L I+W G G LYMTGP HV+DG I L
Sbjct: 243 SLPGGDLHISWAGEGKSLYMTGPVAHVFDGQIVL 276
>ref|ZP_01236847.1| diaminopimelate epimerase [Vibrio angustum S14]
gb|EAS62934.1| diaminopimelate epimerase [Vibrio angustum S14]
Length = 276
Score = 421 bits (1081), Expect = e-116
Identities = 201/270 (74%), Positives = 226/270 (83%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGLGNDF+VVD VTQNVFFSP+ IRRLADRH G+GFDQLLVVEPPYDPE DFHY
Sbjct: 3 INFSKMHGLGNDFVVVDCVTQNVFFSPDAIRRLADRHRGIGFDQLLVVEPPYDPETDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV +KGLTNK I VST G+M+L + +D+ V VNMG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVSMKGLTNKYHISVSTKAGKMLLKLENDNQVTVNMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP+ +P +A +AEKTYI+RA EQT+ CG SMGNPHCV VDDVDTA V+TLGP+LE
Sbjct: 123 PIFEPNKIPMKAKQAEKTYILRAGEQTLFCGAASMGNPHCVTVVDDVDTADVDTLGPLLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPER N GFMQV+ R ++RLRVYERGAGETQACGSGACAAVA+G QGLL E V+V
Sbjct: 183 SHERFPERVNAGFMQVLDRNNVRLRVYERGAGETQACGSGACAAVAIGRVQGLLDENVKV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
LPGG L I W G G PL+MTGPA HV+DG
Sbjct: 243 SLPGGDLYIRWAGEGKPLFMTGPAAHVFDG 272
>ref|ZP_01160927.1| diaminopimelate epimerase [Photobacterium sp. SKA34]
gb|EAR55288.1| diaminopimelate epimerase [Photobacterium sp. SKA34]
Length = 276
Score = 419 bits (1076), Expect = e-115
Identities = 200/270 (74%), Positives = 225/270 (83%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGLGNDF+VVD VTQNVFFSP+ IRRLADRH G+GFDQLLVVEPPYDPE DFHY
Sbjct: 3 INFSKMHGLGNDFVVVDCVTQNVFFSPDAIRRLADRHRGIGFDQLLVVEPPYDPETDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV +KGLTNK I VST G+M+L + +D+ V VNMG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVSMKGLTNKYHISVSTKAGKMLLKLENDNQVTVNMGG 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEPS +P +A +AEKTYI+RA EQT+ CG SMGNPHCV VD+VDTA V+TLGP+LE
Sbjct: 123 PIFEPSKIPMKAKQAEKTYILRAGEQTLFCGAASMGNPHCVTVVDNVDTADVDTLGPLLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPER N GFMQV+ R ++RLRVYERGAGET ACGSGACAAVA+G QGLL E V+V
Sbjct: 183 SHERFPERVNAGFMQVIDRNNVRLRVYERGAGETLACGSGACAAVAIGRSQGLLDENVKV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
LPGG L I W G G PL+MTGPA HV+DG
Sbjct: 243 SLPGGDLYIRWAGEGKPLFMTGPAAHVFDG 272
>ref|YP_131595.1| diaminopimelate epimerase [Photobacterium profundum SS9]
emb|CAG21793.1| putative ribulose-phosphate 3-epimerase [Photobacterium profundum
SS9]
Length = 276
Score = 418 bits (1074), Expect = e-115
Identities = 201/274 (73%), Positives = 223/274 (81%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGLGNDFMVVD VTQNVFFSP IRRLADRH G+GFDQLLVVEPPYDPE DFHY
Sbjct: 3 INFSKMHGLGNDFMVVDCVTQNVFFSPAAIRRLADRHRGIGFDQLLVVEPPYDPETDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV +KGLTNK + VST G+M+L + +D+ V VNMG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVWMKGLTNKYQVAVSTKAGKMLLKLENDNQVTVNMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEPS +PFRA + EKTYIMR E+TI CG VSMGNPHCV VDD++ V+TLGP++E
Sbjct: 123 PEFEPSKIPFRAKQTEKTYIMRVGERTIFCGTVSMGNPHCVTVVDDLELTDVDTLGPLIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFPER N GFMQVV R ++LRVYERGAGETQACGSGACAAVAVG QGLL E V+V
Sbjct: 183 SHERFPERVNAGFMQVVSRNEVKLRVYERGAGETQACGSGACAAVAVGYLQGLLDENVKV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
LPGG L I+W G G LYMTGP HV+DG I L
Sbjct: 243 SLPGGDLHISWAGEGKSLYMTGPVAHVFDGQIVL 276
>ref|YP_205867.1| diaminopimelate epimerase [Vibrio fischeri ES114]
gb|AAW86979.1| diaminopimelate epimerase [Vibrio fischeri ES114]
Length = 276
Score = 417 bits (1073), Expect = e-115
Identities = 195/268 (72%), Positives = 222/268 (82%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
FSKMHGLGNDFMVVD +TQN+FFSP+LIRRLADRH G+GFDQLLVVE PYDPE DFHYRI
Sbjct: 5 FSKMHGLGNDFMVVDCLTQNIFFSPDLIRRLADRHRGIGFDQLLVVEAPYDPETDFHYRI 64
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FNADGSEV QCGNGARCFARFVR+KGLTNK I VST G+M+L V DDD + VNMGEP
Sbjct: 65 FNADGSEVEQCGNGARCFARFVRMKGLTNKTSISVSTKKGKMILKVEDDDQITVNMGEPV 124
Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182
FEP+ +PF+A +AEKTY++R ++T+ G VSMGNPHCV VDDVD V+ G ++ESH
Sbjct: 125 FEPNKIPFKATQAEKTYLLRVDDKTLFSGAVSMGNPHCVTVVDDVDAYDVDKYGQLVESH 184
Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242
ERFPER N GFMQ++ ++LRVYERGAGETQACGSGAC AVAVGI Q LL EEV+V L
Sbjct: 185 ERFPERVNAGFMQIISPNEVKLRVYERGAGETQACGSGACGAVAVGIMQELLGEEVKVSL 244
Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
PGG L I W+GPG PL+MTGPA HVYDG
Sbjct: 245 PGGDLHIVWQGPGKPLFMTGPATHVYDG 272
>gb|EAI61824.1| unknown [environmental sequence]
Length = 276
Score = 414 bits (1065), Expect = e-114
Identities = 196/274 (71%), Positives = 224/274 (81%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGLGNDFMVVD VTQ VFFS E+I++LADRH G+GFDQLL+VEPPYDPELDFHY
Sbjct: 3 IDFSKMHGLGNDFMVVDGVTQKVFFSNEVIKKLADRHFGIGFDQLLLVEPPYDPELDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFVRLKGL N+ I VSTA GR+VL + ++ V VNMG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVRLKGLINRDRIAVSTARGRIVLQLEGENQVTVNMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP +PFRA KAEKTY++RA E T++CG VSMGNPHCVI+V V A V TLGP++E
Sbjct: 123 PQFEPGKIPFRAQKAEKTYLLRAQEHTVMCGAVSMGNPHCVIEVPSVADAPVATLGPIME 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFPER N+GFM++V I+LRV+ERG GET ACG+GACAAV VGI QG L E V V
Sbjct: 183 RHERFPERVNVGFMEMVNASEIKLRVFERGVGETLACGTGACAAVVVGISQGKLKERVTV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
LPGG+L IAWKGPG P+YMTGPA HV+DG I L
Sbjct: 243 TLPGGKLTIAWKGPGQPVYMTGPAEHVFDGQIEL 276
>ref|YP_855007.1| diaminopimelate epimerase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gb|ABK38916.1| diaminopimelate epimerase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 276
Score = 414 bits (1065), Expect = e-114
Identities = 196/274 (71%), Positives = 224/274 (81%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGLGNDFMVVD VTQ VFFS E+I++LADRH G+GFDQLL+VEPPYDPELDFHY
Sbjct: 3 IDFSKMHGLGNDFMVVDGVTQKVFFSNEVIKKLADRHFGIGFDQLLLVEPPYDPELDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFVRLKGL N+ I VSTA GR+VL + ++ V VNMG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVRLKGLINRDRIAVSTARGRIVLQLEGENQVTVNMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP +PFRA KAEKTY++RA E T++CG VSMGNPHCVI+V V A V TLGP++E
Sbjct: 123 PQFEPGKIPFRAQKAEKTYLLRAQEHTVMCGAVSMGNPHCVIEVPSVADAPVATLGPIME 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFPER N+GFM++V I+LRV+ERG GET ACG+GACAAV VGI QG L E V V
Sbjct: 183 RHERFPERVNVGFMEMVNASEIKLRVFERGVGETLACGTGACAAVVVGISQGKLKERVTV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
LPGG+L IAWKGPG P+YMTGPA HV+DG I L
Sbjct: 243 TLPGGKLTIAWKGPGQPVYMTGPAEHVFDGQIEL 276
>ref|ZP_00812694.1| Diaminopimelate epimerase [Shewanella putrefaciens CN-32]
ref|YP_965081.1| Diaminopimelate epimerase [Shewanella sp. W3-18-1]
gb|EAO95881.1| Diaminopimelate epimerase [Shewanella putrefaciens CN-32]
gb|ABM26527.1| Diaminopimelate epimerase [Shewanella sp. W3-18-1]
Length = 275
Score = 402 bits (1033), Expect = e-110
Identities = 192/274 (70%), Positives = 222/274 (81%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QF+KMHGLGNDFMVVD VTQNVFFSPE IRRLADR+ G+GFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFVR KGLTNK IRVST++G+M L + D V VNMG
Sbjct: 62 RIFNADGSEVEQCGNGARCFARFVRNKGLTNKNKIRVSTSSGKMTLRLERDGTVTVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EPS +PF+A K EKTY+++ A+QT LCG SMGNPHCV+ V+DV +AAV +G +L
Sbjct: 122 PILEPSLIPFKAKKPEKTYLLQTAQQTFLCGAASMGNPHCVLDVEDVASAAVAEIGALLT 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP N+GFMQV+ HI+LRVYERGA ET ACG+GACAAV VG QG L ++VRV
Sbjct: 182 KHERFPRGVNVGFMQVINSGHIKLRVYERGAAETLACGTGACAAVVVGQIQGKLDQQVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G G PL+MTGPA HVYDG I L
Sbjct: 242 DLPGGTLTINWEGEGKPLWMTGPAQHVYDGQIQL 275
>ref|ZP_00580321.1| Diaminopimelate epimerase [Shewanella baltica OS155]
ref|ZP_01433348.1| Diaminopimelate epimerase [Shewanella baltica OS195]
gb|EAN45280.1| Diaminopimelate epimerase [Shewanella baltica OS155]
gb|EAU28757.1| Diaminopimelate epimerase [Shewanella baltica OS195]
Length = 275
Score = 397 bits (1020), Expect = e-109
Identities = 190/274 (69%), Positives = 220/274 (80%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QF+KMHGLGNDFMVVD VTQNVFFSPE IRRLADR+ G+GFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG+EV QCGNGARCFARFVR KGLTNK IRVST++G+M L + D V VNMG
Sbjct: 62 RIFNADGTEVEQCGNGARCFARFVRNKGLTNKSKIRVSTSSGKMTLRLERDGTVTVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EPS +PF+A K EKTY+++ QT LCG SMGNPHCV+ V+DV +A+V +G +L
Sbjct: 122 PILEPSQIPFKAKKPEKTYLLQTPMQTFLCGAASMGNPHCVLDVEDVASASVAEIGAMLT 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP N+GFMQVV HI+LRVYERGA ET ACG+GACAAV VG QG L ++VRV
Sbjct: 182 KHERFPRGVNVGFMQVVDSGHIKLRVYERGAAETLACGTGACAAVVVGQVQGKLGQQVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G G PL+MTGPA HVYDG I L
Sbjct: 242 DLPGGTLTINWEGEGKPLWMTGPAQHVYDGQIQL 275
>ref|ZP_01135907.1| diaminopimelate epimerase [Pseudoalteromonas tunicata D2]
gb|EAR26579.1| diaminopimelate epimerase [Pseudoalteromonas tunicata D2]
Length = 276
Score = 395 bits (1016), Expect = e-109
Identities = 184/274 (67%), Positives = 222/274 (81%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGLGNDFMV+D VTQNVF + + I +LADR+ G+GFDQLL+VE PYDP+LDFHY
Sbjct: 3 VNFSKMHGLGNDFMVIDNVTQNVFIARDQIIKLADRNFGIGFDQLLMVEAPYDPDLDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN+DG+EV QCGNGARCFARFVR+KGLTN+ I VST +G M L + D LV VNMG+
Sbjct: 63 RIFNSDGTEVEQCGNGARCFARFVRMKGLTNRHKILVSTKSGNMTLHIEKDGLVSVNMGQ 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EP +PF+A K E TYI RA + T+ CG VSMGNPHCV++VDD+ TA V LGP+LE
Sbjct: 123 PKLEPHTIPFKAAKRENTYIFRAQDHTVFCGAVSMGNPHCVVEVDDITTAPVNVLGPLLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+HERFP+RANIGFMQ++ EHI+LRV+ERGAGET ACG+GACAAV VGI Q LA V+V
Sbjct: 183 NHERFPQRANIGFMQIISPEHIKLRVWERGAGETLACGTGACAAVVVGILQKKLAPHVQV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL++ W+G GH + MTGPA HV+DG I L
Sbjct: 243 DLPGGRLEVRWQGEGHSVRMTGPAEHVFDGQIAL 276
>ref|YP_732529.1| diaminopimelate epimerase [Shewanella sp. MR-4]
ref|YP_739670.1| diaminopimelate epimerase [Shewanella sp. MR-7]
gb|ABI37472.1| diaminopimelate epimerase [Shewanella sp. MR-4]
gb|ABI44613.1| diaminopimelate epimerase [Shewanella sp. MR-7]
Length = 275
Score = 395 bits (1015), Expect = e-108
Identities = 190/274 (69%), Positives = 218/274 (79%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QF+KMHGLGNDFMVVD VTQNVFFSPE IRRLADR+ GVGFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGVGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV CGNGARCFARFVR KGLTNK IRVST+ G+M L + D V VNMG
Sbjct: 62 RIFNADGGEVENCGNGARCFARFVRNKGLTNKNKIRVSTSAGKMTLRLERDGTVTVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +PS +PF+A KAEKTY+++ ++QT LCG SMGNPHCV+ V+DV A V +G +L
Sbjct: 122 PVLDPSQIPFKAKKAEKTYLLQTSQQTFLCGAASMGNPHCVLDVEDVANANVAEIGALLT 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP N+GFMQVV HI+LRVYERGA ET ACG+GACAAV VG QG L ++VRV
Sbjct: 182 KHERFPRGVNVGFMQVVNSGHIKLRVYERGAAETLACGTGACAAVVVGQIQGKLDQQVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G G PL+MTGPA HVYDG I L
Sbjct: 242 DLPGGTLTINWEGEGKPLWMTGPAQHVYDGQIQL 275
>gb|EAG70439.1| unknown [environmental sequence]
Length = 275
Score = 394 bits (1013), Expect = e-108
Identities = 189/274 (68%), Positives = 218/274 (79%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QF+KMHGLGNDFMVVD VTQNVFFSPE IRRLADR+ G+GFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV CGNGARCFARFVR KGLTNK IRVST+ G+M L + D V VNMG
Sbjct: 62 RIFNADGGEVENCGNGARCFARFVRNKGLTNKNKIRVSTSAGKMTLRLERDGTVTVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EPS +PF+A KAEKTY+++ +QT LCG SMGNPHCV+ V+DV +A V +G +L
Sbjct: 122 PVLEPSQIPFKAKKAEKTYLLQTPQQTFLCGAASMGNPHCVLDVEDVTSANVAEIGALLT 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP N+GFMQVV HI+LRVYERGA ET ACG+GACAAV VG QG L ++V+V
Sbjct: 182 KHERFPRGVNVGFMQVVNSGHIKLRVYERGAAETLACGTGACAAVVVGQIQGKLDQQVQV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G G PL+MTGPA HVYDG I L
Sbjct: 242 DLPGGSLTINWEGEGKPLWMTGPAQHVYDGQIQL 275
>ref|YP_868040.1| diaminopimelate epimerase [Shewanella sp. ANA-3]
gb|ABK46634.1| diaminopimelate epimerase [Shewanella sp. ANA-3]
Length = 275
Score = 394 bits (1012), Expect = e-108
Identities = 189/274 (68%), Positives = 217/274 (79%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QF+KMHGLGNDFMVVD VTQNVFFSPE IRRLADR+ G+GFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV CGNGARCFARFVR KGLTNK IRVST+ G+M L + D V VNMG
Sbjct: 62 RIFNADGGEVENCGNGARCFARFVRNKGLTNKNKIRVSTSAGKMTLRLERDGTVTVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +PS +PF+A KAEKTY+++ +QT LCG SMGNPHCV+ V+DV A V +G +L
Sbjct: 122 PVLDPSQIPFKAKKAEKTYLLQTPQQTFLCGAASMGNPHCVLDVEDVANANVAEIGALLT 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP N+GFMQVV HI+LRVYERGA ET ACG+GACAAV VG QG L ++VRV
Sbjct: 182 KHERFPRGVNVGFMQVVNSGHIKLRVYERGAAETLACGTGACAAVVVGQIQGKLDQQVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G G PL+MTGPA HVYDG I L
Sbjct: 242 DLPGGTLTINWEGEGKPLWMTGPAQHVYDGQIQL 275
>ref|ZP_00835796.1| Diaminopimelate epimerase [Shewanella sp. PV-4]
gb|EAP04335.1| Diaminopimelate epimerase [Shewanella sp. PV-4]
Length = 279
Score = 394 bits (1012), Expect = e-108
Identities = 192/276 (69%), Positives = 221/276 (80%), Gaps = 4/276 (1%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ F+KMHGLGNDFMVVD VTQNV+FSPE I+RLADR+ G+GFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IHFTKMHGLGNDFMVVDGVTQNVYFSPEQIKRLADRNFGIGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV+ KGL NK+ I+VST++G+M L + D V VNMG
Sbjct: 62 RIFNADGSEVEQCGNGARCFARFVKSKGLINKQKIKVSTSSGKMTLRLERDGSVTVNMGI 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRA----AEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176
P EPS +PF A KAEKTY+++A QT LCG VSMGNPHCV++VDDV A VE +G
Sbjct: 122 PVLEPSRIPFNAKKAEKTYLLQADMPEGMQTFLCGAVSMGNPHCVLEVDDVANADVERIG 181
Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236
+L HERFP+ N+GFMQVV HI+LRVYERGA ET ACGSGACAAVAVG QG LA
Sbjct: 182 SLLTKHERFPKGVNVGFMQVVDANHIKLRVYERGAAETLACGSGACAAVAVGQLQGKLAR 241
Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272
VRV+LPGG L I W+G G PL+MTGPA HVYDG I
Sbjct: 242 RVRVDLPGGSLTINWEGEGKPLWMTGPAEHVYDGQI 277
>gb|EAK69259.1| unknown [environmental sequence]
Length = 275
Score = 394 bits (1011), Expect = e-108
Identities = 188/274 (68%), Positives = 218/274 (79%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QF+KMHGLGNDFMVVD VTQNVFFSPE IRRLADR+ G+GFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV CGNGARCFARFVR KGLTNK IRVST+ G+M L + D V VNMG
Sbjct: 62 RIFNADGGEVENCGNGARCFARFVRNKGLTNKNKIRVSTSAGKMTLRLERDGTVTVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EPS +PF+A KAEKTY+++ +QT LCG SMGNPHCV+ V+DV +A V +G +L
Sbjct: 122 PVLEPSQIPFKAKKAEKTYLLQTPQQTFLCGAASMGNPHCVLDVEDVASANVAEIGALLT 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP N+GFMQVV H++LRVYERGA ET ACG+GACAAV VG QG L ++V+V
Sbjct: 182 KHERFPRGVNVGFMQVVNSGHVKLRVYERGAAETLACGTGACAAVVVGQIQGKLDQQVQV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G G PL+MTGPA HVYDG I L
Sbjct: 242 DLPGGSLTINWEGEGKPLWMTGPAQHVYDGQIQL 275
>ref|NP_719833.1| diaminopimelate epimerase [Shewanella oneidensis MR-1]
sp|Q8E9H5|DAPF_SHEON Diaminopimelate epimerase (DAP epimerase)
gb|AAN57277.1|AE015863_6 diaminopimelate epimerase [Shewanella oneidensis MR-1]
Length = 275
Score = 394 bits (1011), Expect = e-108
Identities = 189/274 (68%), Positives = 217/274 (79%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QF+KMHGLGNDFMVVD +TQNVFFSPE IRRLADR+ GVGFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IQFTKMHGLGNDFMVVDGITQNVFFSPEQIRRLADRNFGVGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV CGNGARCFARFVR KGLTNK IRVST+ G+M L + D V VNMG
Sbjct: 62 RIFNADGGEVENCGNGARCFARFVRNKGLTNKNKIRVSTSAGKMTLRLERDGTVTVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EPS +PF+A KAEKTY+++ +QT LCG SMGNPHCV+ V+DV A V +G +L
Sbjct: 122 PVLEPSQIPFKAKKAEKTYLLQTPQQTFLCGAASMGNPHCVLDVEDVANANVAEIGALLT 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP N+GFMQVV HI+LRVYERGA ET ACG+GACAAV VG QG L ++V+V
Sbjct: 182 KHERFPRGVNVGFMQVVNAGHIKLRVYERGAAETLACGTGACAAVVVGQIQGKLDQQVQV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G G PL+MTGPA HVYDG I L
Sbjct: 242 DLPGGSLTINWEGEGKPLWMTGPAQHVYDGQIQL 275
>ref|YP_561409.1| Diaminopimelate epimerase [Shewanella denitrificans OS217]
gb|ABE53686.1| Diaminopimelate epimerase [Shewanella denitrificans OS217]
Length = 275
Score = 393 bits (1010), Expect = e-108
Identities = 187/274 (68%), Positives = 220/274 (80%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ F+KMHGLGNDFMVVD VTQNVFFSPE IRRLA+R+ GVGFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IHFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLANRNFGVGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFVR KGLT K IRVST++G+M L + D V VNMG
Sbjct: 62 RIFNADGSEVEQCGNGARCFARFVRNKGLTQKNKIRVSTSSGKMTLRLERDGSVVVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +PS +PF+A K EKTY+++ QT LCG +SMGNPHCVI+VDD+DT AV+ +G +L
Sbjct: 122 PVTDPSNIPFKAKKVEKTYLLQTPVQTFLCGAISMGNPHCVIEVDDIDTVAVDEIGALLT 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERF + N+GFMQ++ HI+LRVYERGAGET ACG+GACAA A+G Q L+ +VRV
Sbjct: 182 RHERFSKGVNVGFMQIINPGHIKLRVYERGAGETLACGTGACAAAAIGQLQDKLSRQVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W G G PL+MTGPA HVYDG I L
Sbjct: 242 DLPGGTLHIDWDGEGKPLWMTGPAEHVYDGQIQL 275
>ref|YP_588594.1| diaminopimelate epimerase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gb|ABF14159.1| diaminopimelate epimerase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 274
Score = 393 bits (1009), Expect = e-108
Identities = 186/273 (68%), Positives = 223/273 (81%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVD VTQNV+ SP IR LA+RH GVGFDQLL VEPPYDPE+DFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDVVTQNVYLSPTKIRFLANRHSGVGFDQLLFVEPPYDPEIDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARC A FVR+K LTNKR+I +ST RMVLT+ ++++VRVNMG
Sbjct: 61 RIFNADGSEVTQCGNGARCLAHFVRMKKLTNKREIYISTQTSRMVLTIIENNMVRVNMGV 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FE +PF ++ EK I+ A+ I G+VS+GNPHC++ V++VD+A V +GP+LE
Sbjct: 121 PKFELPQIPFDMHQIEKKEILYLAKNYIFGGIVSIGNPHCIMIVNNVDSAQVSIIGPILE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H+ F ER N+GFMQV+ RE + LRVYERG GETQACGSGACAAVA+GI+ GLLAE+V+V
Sbjct: 181 IHKYFSERTNVGFMQVINREQVLLRVYERGVGETQACGSGACAAVAIGIRLGLLAEQVQV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273
LPGG+L I W+GPG LYMTGPAVH+YDGFI+
Sbjct: 241 ALPGGKLVIYWRGPGQSLYMTGPAVHIYDGFIN 273
>gb|EAI61961.1| unknown [environmental sequence]
Length = 275
Score = 392 bits (1007), Expect = e-107
Identities = 188/274 (68%), Positives = 216/274 (78%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QF+KMHGLGNDFMVVD VTQNVFFSPE IRRLADR+ G+GFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV CGNGARCFARFVR KGLTNK IRVST+ G+M L + D V VNMG
Sbjct: 62 RIFNADGGEVENCGNGARCFARFVRNKGLTNKNKIRVSTSAGKMTLRLERDGTVTVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +PS +PF+A KAEKTY+++ +QT LCG SMGNPHCV+ +DV A V +G +L
Sbjct: 122 PVLDPSQIPFKAKKAEKTYLLQTPQQTFLCGAASMGNPHCVLDFEDVANANVAEIGALLT 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP N+GFMQVV HI+LRVYERGA ET ACG+GACAAV VG QG L ++VRV
Sbjct: 182 KHERFPRGVNVGFMQVVNSGHIKLRVYERGAAETLACGTGACAAVVVGQIQGKLDQQVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G G PL+MTGPA HVYDG I L
Sbjct: 242 DLPGGTLTINWEGEGKPLWMTGPAQHVYDGQIQL 275
>ref|ZP_01612521.1| diaminopimelate epimerase [Alteromonadales bacterium TW-7]
gb|EAW28170.1| diaminopimelate epimerase [Alteromonadales bacterium TW-7]
Length = 276
Score = 392 bits (1007), Expect = e-107
Identities = 181/274 (66%), Positives = 220/274 (80%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGLGNDF+V+D +TQNVF S + I++LADRH G+GFDQLL+VE PY P+LDFHY
Sbjct: 3 VNFSKMHGLGNDFVVIDNITQNVFLSRDQIKKLADRHFGIGFDQLLMVEAPYSPDLDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG+EV QCGNGARCFARFVR+KGLTNK I VST +G + L + D V VNMG
Sbjct: 63 RIFNADGTEVEQCGNGARCFARFVRMKGLTNKHKISVSTKSGNLTLYIEKDGQVTVNMGH 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEPS +P +A+K E TYI+RA E T+ G VSMGNPHCVI+VDD+ TA V+ LGP+LE
Sbjct: 123 PNFEPSKIPLKASKRELTYIIRAEEHTVFSGAVSMGNPHCVIEVDDITTAQVDVLGPLLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+HERFP+RANIGFMQV+ +EHI+LRV+ERG ET ACG+GACAA+ +G Q L+ V+V
Sbjct: 183 NHERFPQRANIGFMQVISQEHIKLRVWERGVNETLACGTGACAAMVIGHMQSKLSSAVQV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W G GHP+ MTGPA HV+DG + L
Sbjct: 243 DLPGGTLQIRWSGEGHPVRMTGPAEHVFDGQVAL 276
>gb|EAK41418.1| unknown [environmental sequence]
Length = 276
Score = 390 bits (1003), Expect = e-107
Identities = 185/274 (67%), Positives = 220/274 (80%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QFSKMHGLGNDFMV+D VTQNVFFS E I++LA+R+ G+GFDQLL+VEPPYDPE DFHY
Sbjct: 3 VQFSKMHGLGNDFMVIDNVTQNVFFSKEKIQQLANRNFGIGFDQLLMVEPPYDPEQDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV+ KGL N+ I VST G+MVL + D V VNMG+
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVKQKGLINRNKIVVSTKAGKMVLYLEKDGQVTVNMGK 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP+ +P +ANK E TYI+R E T+ G SMGNPHCV++VDDVDTA V +GP++E
Sbjct: 123 PEFEPANIPLKANKQENTYILRVGESTLFIGSASMGNPHCVMEVDDVDTANVAEIGPLVE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFPE N+GFMQ++ HI+LRV+ERG+GET ACGSGACAAVA+G QG L ++VRV
Sbjct: 183 KHERFPEGVNVGFMQIINESHIKLRVFERGSGETLACGSGACAAVAIGQIQGKLGKDVRV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W GP + L MTGPA HVYDG I+L
Sbjct: 243 DLPGGSLRIRWPGPDNVLKMTGPAEHVYDGHINL 276
>ref|YP_749145.1| Diaminopimelate epimerase [Shewanella frigidimarina NCIMB 400]
gb|ABI70307.1| Diaminopimelate epimerase [Shewanella frigidimarina NCIMB 400]
Length = 275
Score = 390 bits (1003), Expect = e-107
Identities = 188/274 (68%), Positives = 218/274 (79%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ F+KMHGLGNDFMVVD VTQNVFFSPE IRRLADR+ G+GFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IHFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFVR KGLT K IRVST +G++ L + D V VNMG
Sbjct: 62 RIFNADGSEVEQCGNGARCFARFVRNKGLTQKNKIRVSTNSGKITLRIERDGNVTVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EPS +PF+A K+EKTY+++ QT LCG +SMGNPHCVIQV+DV T V+ +G L
Sbjct: 122 PVIEPSQIPFKAKKSEKTYLLQTPMQTYLCGAISMGNPHCVIQVEDVQTVNVDEIGSSLT 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP+ N+GFMQV+ HI+LRVYERGA ET ACG+GACAA AVG Q L ++VRV
Sbjct: 182 RHERFPKGVNVGFMQVINPGHIKLRVYERGAAETLACGTGACAAAAVGQLQDKLDKQVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G G PL+MTGPA HVYDG I L
Sbjct: 242 DLPGGSLIINWEGEGKPLWMTGPAEHVYDGQIQL 275
>ref|ZP_01108559.1| diaminopimelate epimerase [Alteromonas macleodii 'Deep ecotype']
gb|EAR07138.1| diaminopimelate epimerase [Alteromonas macleodii 'Deep ecotype']
Length = 276
Score = 390 bits (1001), Expect = e-107
Identities = 185/274 (67%), Positives = 220/274 (80%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QFSKMHGLGNDFMV+D VTQNVFFS E I++LADR+ G+GFDQLL+VEPPYDPE DFHY
Sbjct: 3 VQFSKMHGLGNDFMVIDNVTQNVFFSKEKIQQLADRNFGIGFDQLLMVEPPYDPEQDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV+ KGL N+ I VST G+MVL + D V VNMG+
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVKQKGLINRNKIVVSTKAGKMVLYLEKDGQVTVNMGK 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP+ +P +ANK E TYI+R E T+ G SMGNPHCV++VDDVDTA V +GP++E
Sbjct: 123 PEFEPANIPLKANKQENTYILRVGESTLFIGAASMGNPHCVMEVDDVDTANVAEIGPLVE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERF E N+GFMQ++ HI+LRV+ERG+GET ACGSGACAAVA+G QG L+++VRV
Sbjct: 183 KHERFSEGVNVGFMQIINDSHIKLRVFERGSGETLACGSGACAAVAIGQIQGKLSKDVRV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W GP + L MTGPA HVYDG I+L
Sbjct: 243 DLPGGSLRIRWPGPDNVLKMTGPAEHVYDGHINL 276
>ref|ZP_01602086.1| Diaminopimelate epimerase [Shewanella pealeana ATCC 700345]
gb|EAW00523.1| Diaminopimelate epimerase [Shewanella pealeana ATCC 700345]
Length = 278
Score = 387 bits (995), Expect = e-106
Identities = 187/272 (68%), Positives = 217/272 (79%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QF+KMHGLGNDFMVVD VTQNVFFSP+ I+RLADR+ GVGFDQLL+VEPPYDP+LDFHY
Sbjct: 5 IQFTKMHGLGNDFMVVDGVTQNVFFSPDQIKRLADRNFGVGFDQLLLVEPPYDPDLDFHY 64
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFVR KGLT+K IRVST++G++ L + D V VNMG
Sbjct: 65 RIFNADGSEVEQCGNGARCFARFVRNKGLTHKHKIRVSTSSGKITLRLERDGKVTVNMGI 124
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EP +PF A K EKTY++ A+ T LCG VSMGNPHCVI+V+DV V+T+G L
Sbjct: 125 PALEPGKIPFTAKKVEKTYLLMASSGTYLCGAVSMGNPHCVIEVEDVAATDVDTIGGELT 184
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+HERFP+ N+GFMQV+ HI+LRVYERGA ET ACG+GACAAV VGI QG L V+V
Sbjct: 185 NHERFPKGVNVGFMQVLNSGHIKLRVYERGAAETLACGTGACAAVVVGILQGKLDRNVQV 244
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272
+LPGG L I W G G PL+MTGPA HVYDG I
Sbjct: 245 DLPGGSLMINWDGEGKPLWMTGPAEHVYDGQI 276
>ref|YP_338644.1| diaminopimelate epimerase [Pseudoalteromonas haloplanktis TAC125]
emb|CAI85201.1| diaminopimelate epimerase [Pseudoalteromonas haloplanktis TAC125]
Length = 276
Score = 387 bits (993), Expect = e-106
Identities = 179/274 (65%), Positives = 216/274 (78%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGLGNDF+V+D +TQNVF S + I +LADRH G+GFDQLL+VE PY P+LDFHY
Sbjct: 3 VNFSKMHGLGNDFVVIDNITQNVFLSRDQIIKLADRHFGIGFDQLLMVEAPYSPDLDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG+EV QCGNGARCFARFVR+KGLTNK I VST +G + L + D V VNMG
Sbjct: 63 RIFNADGTEVEQCGNGARCFARFVRMKGLTNKHKITVSTKSGNLTLYIEKDGQVTVNMGH 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNFEPS +P +A K E TYI+R E T+ G VSMGNPHCV++VDD+ TA V+ LGP+LE
Sbjct: 123 PNFEPSKIPLKATKRELTYIIRTEEHTVFSGAVSMGNPHCVLEVDDITTAQVDILGPLLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+HERFP+RANIGFMQV+ +EHI+LRV+ERG ET ACG+GACAA+ +G Q L V+V
Sbjct: 183 NHERFPQRANIGFMQVISKEHIKLRVWERGVNETLACGTGACAAMVIGFIQNKLISTVQV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W G GHP+ MTGPA HV+DG + L
Sbjct: 243 DLPGGSLQIRWNGEGHPVRMTGPAEHVFDGQVAL 276
>ref|YP_156936.1| diaminopimelate epimerase [Idiomarina loihiensis L2TR]
gb|AAV83387.1| Diaminopimelate epimerase [Idiomarina loihiensis L2TR]
Length = 275
Score = 386 bits (991), Expect = e-106
Identities = 183/270 (67%), Positives = 219/270 (81%), Gaps = 1/270 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGLGNDFMVVD VTQN++ +P+ IRR ADRH G+GFDQ+L+VEPPYDP+LDFHY
Sbjct: 3 LHFSKMHGLGNDFMVVDNVTQNLYVNPDQIRRWADRHTGIGFDQMLLVEPPYDPDLDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFA+FV+ K L+NK ++VST G+MVL + D V V+MGE
Sbjct: 63 RIFNADGSEVAQCGNGARCFAKFVKAKNLSNKNHLKVSTKAGKMVLHLEKDGQVTVDMGE 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP+AVPF+A KAE+TY++R E+T+LCGV+ +GNPHCVI VD+VDT VETLG L
Sbjct: 123 PLFEPAAVPFKAQKAEQTYVLRVKEETVLCGVLGLGNPHCVIAVDNVDTTPVETLGAALA 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+HERFPE N+GFMQ V + I+LRV+ERG GET+ACGSGACAA GIQQGLL E V+V
Sbjct: 183 AHERFPESVNVGFMQKVSADEIKLRVFERGVGETRACGSGACAAAVAGIQQGLLNERVKV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
LPGG L I W+ G P+ MTGPA VYDG
Sbjct: 243 SLPGGDLIIRWQ-QGQPVKMTGPAELVYDG 271
>ref|YP_929121.1| Diaminopimelate epimerase [Shewanella amazonensis SB2B]
gb|ABM01452.1| Diaminopimelate epimerase [Shewanella amazonensis SB2B]
Length = 275
Score = 385 bits (989), Expect = e-105
Identities = 186/274 (67%), Positives = 216/274 (78%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ F+KMHGLGNDFMVVD VTQNVFFSPE IRRLADR+ G+GFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IHFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFVR KGLT K I+VST+ G+M L + D V VNMG
Sbjct: 62 RIFNADGSEVEQCGNGARCFARFVRNKGLTQKHKIKVSTSAGKMTLRLERDGGVTVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +P+ +PF+A K EKTY++++A+QT LCG VSMGNPH V++VDD+ A V +G L
Sbjct: 122 PILDPAQIPFKAKKFEKTYLLQSAQQTFLCGAVSMGNPHVVLEVDDITQAPVADVGAQLT 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP+ N+GFMQVV +HI+LRVYERGA ET ACGSGACAA VG QG L VRV
Sbjct: 182 RHERFPKGVNVGFMQVVAPDHIKLRVYERGAAETLACGSGACAAAVVGQLQGKLGSRVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+G G PL+MTGPA VYDG I L
Sbjct: 242 DLPGGSLTINWEGEGKPLWMTGPAQQVYDGQIQL 275
>ref|ZP_01539516.1| diaminopimelate epimerase [Shewanella woodyi ATCC 51908]
gb|EAV38190.1| diaminopimelate epimerase [Shewanella woodyi ATCC 51908]
Length = 279
Score = 382 bits (982), Expect = e-105
Identities = 183/276 (66%), Positives = 220/276 (79%), Gaps = 4/276 (1%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ F+KMHGLGNDFMVVD VTQNVFFSPE I+RLADR+ GVGFDQLL+VEPPYDP+LDFHY
Sbjct: 2 IHFAKMHGLGNDFMVVDGVTQNVFFSPEQIKRLADRNFGVGFDQLLLVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV QCGNGARCFARFVR KGLTNK I+VST+NG++ L + D V VNMG
Sbjct: 62 RIFNADGGEVEQCGNGARCFARFVRNKGLTNKHKIKVSTSNGKITLRLERDGNVTVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRA----AEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176
P +PS +PF A + EKTY+++ A +T LCG +SMGNPHCV++V+D++ A VE +G
Sbjct: 122 PVLDPSKIPFNAKRVEKTYLLQTSSSHAMETFLCGAISMGNPHCVLEVEDIEHAEVERIG 181
Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236
+L +ERFP+ N+GFMQV+ HI+LRVYERGA ET ACG+GACAA AVG QG L +
Sbjct: 182 ALLTQNERFPKGVNVGFMQVIDAGHIKLRVYERGAAETLACGTGACAAAAVGQLQGKLNK 241
Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272
VRV+LPGG L I W+G G+PL+MTGPA HVYDG I
Sbjct: 242 MVRVDLPGGTLTINWEGEGNPLWMTGPAEHVYDGQI 277
>ref|YP_663627.1| Diaminopimelate epimerase [Pseudoalteromonas atlantica T6c]
gb|ABG42573.1| Diaminopimelate epimerase [Pseudoalteromonas atlantica T6c]
Length = 276
Score = 382 bits (980), Expect = e-104
Identities = 187/274 (68%), Positives = 216/274 (78%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QFSKMHGLGNDF+V+D VTQNVFFS E I +LADR+ G+GFDQLLVVEPPYDPE DFHY
Sbjct: 3 VQFSKMHGLGNDFVVIDNVTQNVFFSKEKISQLADRNFGIGFDQLLVVEPPYDPEQDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN+DGSEV+QCGNGARCFARFV++KGLTN+ I VST GR+VL D + VNMGE
Sbjct: 63 RIFNSDGSEVSQCGNGARCFARFVKMKGLTNRNKIVVSTKAGRIVLYHERDGQITVNMGE 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP+ +P +ANK E YI+R + T CG VSMGNPHCV+ VDDV+TA VE +G L
Sbjct: 123 PIFEPAKIPLKANKQENIYIIRENDHTFFCGAVSMGNPHCVLLVDDVETADVEGIGKTLV 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+HERFPE ANIGFMQ++ HI+LRVYERG GET ACGSGACAAVAVG Q L +EV V
Sbjct: 183 AHERFPEGANIGFMQILNSGHIKLRVYERGVGETLACGSGACAAVAVGQMQKKLNKEVTV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I W+GPG L MTG A HV+DG I L
Sbjct: 243 DLPGGTLKIRWQGPGSILKMTGTAEHVFDGNITL 276
>ref|YP_266845.1| diaminopimelate epimerase [Colwellia psychrerythraea 34H]
gb|AAZ24959.1| diaminopimelate epimerase [Colwellia psychrerythraea 34H]
Length = 276
Score = 380 bits (975), Expect = e-104
Identities = 179/274 (65%), Positives = 215/274 (78%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGLGNDF+V+D VTQNVF SPE I + A+R+ GVGFDQLLVVEPPYDP+LDFHY
Sbjct: 3 VNFSKMHGLGNDFLVLDNVTQNVFLSPEQITKFANRNFGVGFDQLLVVEPPYDPDLDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RI+NADGSEV QCGNGARCFA+FVR+KGL NK I+VST+ G+M L + D + V M
Sbjct: 63 RIYNADGSEVGQCGNGARCFAKFVRMKGLCNKHKIKVSTSTGKMNLHIERDGNISVTMPV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP +PF A K E TYI+R+ +T+LCG VSMGNPHCV+ VD V A VE+LG L
Sbjct: 123 PQFEPKKIPFTAQKTEGTYILRSESETVLCGAVSMGNPHCVVTVDSVAEADVESLGKELS 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFPE AN+GFM++V +I+LRVYERGA ET ACGSGACAAV +G Q LA++V V
Sbjct: 183 VHERFPEDANVGFMEIVSPNYIKLRVYERGAAETLACGSGACAAVVIGYMQKKLAKQVTV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGG+L I W+GPGHP+ M+GPA HV+DG I +
Sbjct: 243 ELPGGKLRIFWQGPGHPVKMSGPATHVFDGQISI 276
>gb|EAK12579.1| unknown [environmental sequence]
Length = 269
Score = 379 bits (974), Expect = e-104
Identities = 180/269 (66%), Positives = 213/269 (79%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHGLGNDFMV+DAV+QNVF + E I++LADR+ GVGFDQLL+VEPPYDP+LDFHYRIFNA
Sbjct: 1 MHGLGNDFMVIDAVSQNVFLTKEQIKKLADRNFGVGFDQLLMVEPPYDPDLDFHYRIFNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DGSEV QCGNGARCFA+FVR KGLTNK I VST +G++ L + D V VNMG P F+P
Sbjct: 61 DGSEVEQCGNGARCFAKFVRHKGLTNKYKISVSTKSGKITLYIEQDGQVTVNMGVPQFDP 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
+ VPF+A K E YI+ + + T LCGVVSMGNPH VI VDD+ TA V GPV E+HERF
Sbjct: 121 AKVPFKAQKQELNYILHSEDATTLCGVVSMGNPHAVILVDDIQTAPVHQWGPVFENHERF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245
PERANIGFMQV+ H++LRV+ERGAGET ACG+GACAA +G Q L +VRV+LPGG
Sbjct: 181 PERANIGFMQVLSPSHVKLRVWERGAGETLACGTGACAAAVIGQMQKKLQTQVRVDLPGG 240
Query: 246 RLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L I W+GPG P+ MTGPA HV+DG + L
Sbjct: 241 SLQIRWQGPGQPVKMTGPAEHVFDGQLFL 269
>gb|EAK19828.1| unknown [environmental sequence]
Length = 269
Score = 378 bits (971), Expect = e-103
Identities = 180/269 (66%), Positives = 212/269 (78%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHGLGNDFMV+DAV+QNVF + E I++LADR+ GVGFDQLL+VEPPYDP+LDFHYRIFNA
Sbjct: 1 MHGLGNDFMVIDAVSQNVFLTKEQIKKLADRNFGVGFDQLLMVEPPYDPDLDFHYRIFNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DGSEV QCGNGARCFA+FVR KGLTNK I VST +G++ L + D V VNMG P F+P
Sbjct: 61 DGSEVEQCGNGARCFAKFVRHKGLTNKYKISVSTKSGKITLYIEQDGQVTVNMGVPQFDP 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
VPF+A K E YI+ + + T LCGVVSMGNPH VI VDD+ TA V GPV E+HERF
Sbjct: 121 VKVPFKAQKQELNYILHSEDATTLCGVVSMGNPHAVILVDDIQTAPVHQWGPVFENHERF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245
PERANIGFMQV+ H++LRV+ERGAGET ACG+GACAA +G Q L +VRV+LPGG
Sbjct: 181 PERANIGFMQVLSPSHVKLRVWERGAGETLACGTGACAAAVIGQMQKKLQTQVRVDLPGG 240
Query: 246 RLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L I W+GPG P+ MTGPA HV+DG + L
Sbjct: 241 SLQIRWQGPGQPVKMTGPAEHVFDGQLFL 269
>ref|ZP_01449358.1| diaminopimelate epimerase [alpha proteobacterium HTCC2255]
gb|EAU50446.1| diaminopimelate epimerase [alpha proteobacterium HTCC2255]
Length = 276
Score = 377 bits (968), Expect = e-103
Identities = 178/274 (64%), Positives = 215/274 (78%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMVVD +TQN++FSPE I++LADR+ GVGFDQLL+VEPPYDP+ DFHY
Sbjct: 3 VEFTKMHGLGNDFMVVDCITQNIYFSPERIQQLADRNFGVGFDQLLLVEPPYDPDQDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV+ K LT+K I VST G+++L + D V VNMG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVKYKNLTHKTKISVSTKAGKIMLYLEKDGQVTVNMGR 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F P VP +A K E TYI+R A+QT CG VS+GNPHCV+ VDD+DT V +G +LE
Sbjct: 123 PRFAPDDVPMKAQKQENTYIIREADQTFFCGAVSLGNPHCVMVVDDIDTYDVLGVGALLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFP++ N+GFMQ++ +I+LRV+ERG GET ACGSGACAAVA+G QQG L EV V
Sbjct: 183 SHERFPQKVNVGFMQIIDENNIKLRVFERGVGETLACGSGACAAVAIGQQQGKLGTEVNV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
LPGG L I W+G H + MTGPA HV+DG I L
Sbjct: 243 TLPGGPLTIRWQGDDHTIKMTGPAEHVFDGKIVL 276
>ref|ZP_01042640.1| Diaminopimelate epimerase [Idiomarina baltica OS145]
gb|EAQ32674.1| Diaminopimelate epimerase [Idiomarina baltica OS145]
Length = 275
Score = 375 bits (964), Expect = e-102
Identities = 173/270 (64%), Positives = 216/270 (80%), Gaps = 1/270 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QFSKMHGLGNDF+V+D VTQN + +PE I++ ADRH G+GFDQLL+VEPPYDP+LDFHY
Sbjct: 3 LQFSKMHGLGNDFVVIDNVTQNFYVNPEQIKQWADRHRGIGFDQLLLVEPPYDPDLDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEVAQCGNGARCFA+FV+ KGL+NK ++VST G MVL + D V V MGE
Sbjct: 63 RIFNADGSEVAQCGNGARCFAKFVKAKGLSNKNHLKVSTKAGTMVLHIEKDGQVTVEMGE 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP++VPF+A K E TY++R A++T+LCGV+ +GNPHCVI+ DDV+TA V +LG +
Sbjct: 123 PMFEPASVPFKAQKPEHTYVLRVADETVLCGVMGLGNPHCVIETDDVNTAPVASLGEKIA 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFPE N+GFMQ+V R+ I+LRV+ERG GETQACGSGACAA +G+QQ L +V+V
Sbjct: 183 QHERFPESVNVGFMQIVSRQQIKLRVFERGVGETQACGSGACAAAVIGMQQDKLERQVKV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
LPGG L I W+ G + MTGPA ++DG
Sbjct: 243 TLPGGELTIRWQA-GQSVKMTGPATLIFDG 271
>ref|YP_941513.1| Diaminopimelate epimerase [Psychromonas ingrahamii 37]
gb|ABM01914.1| Diaminopimelate epimerase [Psychromonas ingrahamii 37]
Length = 275
Score = 372 bits (956), Expect = e-102
Identities = 176/274 (64%), Positives = 214/274 (78%), Gaps = 1/274 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QFSKMHGLGNDFMV+D VTQNVF S + I RLADR+ G+GFDQLL++EPPYDPELDFHY
Sbjct: 3 IQFSKMHGLGNDFMVIDNVTQNVFLSKDTISRLADRNFGIGFDQLLMIEPPYDPELDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV++KGLT KR I VSTA G++ L + D + V+MG+
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVKMKGLTQKRIINVSTAKGKIQLKIEHDGNITVDMGK 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EP+ VPF A K EKTYI+R + T+LCGVVS+GNPHCV+ VDD+D A VETLGP+LE
Sbjct: 123 PILEPAKVPFEAQKEEKTYILRVEDHTVLCGVVSIGNPHCVVLVDDIDNAPVETLGPLLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+HERFP + N+GF+++ R+H RLRV+ERG GET ACG+GACAA VG Q L +
Sbjct: 183 NHERFPNKVNVGFLEIKSRDHARLRVWERGVGETLACGTGACAAAVVGQLQDKLNPHCTI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGG L + W+ PG + MTG A V+DG I +
Sbjct: 243 ELPGGELRLFWQ-PGQSVKMTGTADFVFDGQIQI 275
>ref|ZP_01216921.1| diaminopimelate epimerase [Psychromonas sp. CNPT3]
gb|EAS38260.1| diaminopimelate epimerase [Psychromonas sp. CNPT3]
Length = 275
Score = 362 bits (928), Expect = 2e-98
Identities = 170/274 (62%), Positives = 213/274 (77%), Gaps = 1/274 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QFSKM GLGNDFMV+D +TQ+VF S I+RLADR+ G+GFDQLL+VEPPYDPELDFHY
Sbjct: 3 IQFSKMQGLGNDFMVIDNITQSVFLSKTAIQRLADRNFGIGFDQLLLVEPPYDPELDFHY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV+LKGLT KR I VSTA G++ L + D + V+MG+
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVKLKGLTQKRVINVSTAKGKIQLKIEQDGNITVDMGK 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F+P +PF A K EKTYI+R E T++CGVVSMGNPHCV+ VDD+D+A V+TLGP+LE
Sbjct: 123 PIFDPHKIPFVAKKEEKTYILRVQEHTVICGVVSMGNPHCVVLVDDIDSAPVDTLGPLLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+HERFP + N+ F+++ ++ +LRV+ERG GET ACG+GACAA +G QG LA +
Sbjct: 183 NHERFPNKVNVSFLEIKSPDYAKLRVWERGVGETLACGTGACAAAVIGQLQGKLATHCTI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGG+L W+ G + MTG A V+DG I +
Sbjct: 243 ELPGGKLKFFWQ-MGQSVRMTGAAEFVFDGQIQI 275
>gb|AAW92128.1| diaminopimelate epimerase [Enterobacter asburiae]
Length = 180
Score = 353 bits (907), Expect = 4e-96
Identities = 172/179 (96%), Positives = 177/179 (98%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDP+LDFHY
Sbjct: 2 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPDLDFHY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL+VTDD+LVRVNMGE
Sbjct: 62 RIFNADGSEVNQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTDDELVRVNMGE 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179
PNFEPS VPFRANKAEKTYIMRAAEQT+LCGVVSMGNPHCVIQVDDV+TAAVETLGPVL
Sbjct: 122 PNFEPSVVPFRANKAEKTYIMRAAEQTVLCGVVSMGNPHCVIQVDDVETAAVETLGPVL 180
>ref|NP_878854.1| diaminopimelate epimerase [Candidatus Blochmannia floridanus]
emb|CAD83261.1| diaminopimelate epimerase [Candidatus Blochmannia floridanus]
Length = 276
Score = 353 bits (906), Expect = 5e-96
Identities = 166/276 (60%), Positives = 216/276 (78%), Gaps = 2/276 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
M+FSKMHGLGNDF+++D++TQ V+F+ + IR L++R G+GFDQLLVVEPPYDP +DFH
Sbjct: 1 MRFSKMHGLGNDFVIIDSITQKVYFNSDKIRSLSNRFYGIGFDQLLVVEPPYDPNIDFHC 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RI+NADGSEV QCGNG RC ARFV +K LTNK+ I++ST M+L+V D + + VNMGE
Sbjct: 61 RIYNADGSEVYQCGNGIRCVARFVCIKKLTNKQHIKISTDTYSMMLSVLDSEFISVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F+P +PF + + +K Y++ TILCGVVS+GNPHCVI V+ VD V LG +LE
Sbjct: 121 PIFDPIKIPFFSTQYQKMYVLFVPNFTILCGVVSIGNPHCVILVEQVDLVPVTVLGSILE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE--EV 238
+H FP++ANI FMQ++ + +I+LRVYERG+GET+ACGS ACAAVA+GIQQGLL + V
Sbjct: 181 NHHCFPKKANISFMQIISQNNIKLRVYERGSGETKACGSAACAAVAIGIQQGLLKKNISV 240
Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+V LPGG L I+WKG G+PLYM G A ++YDG I+L
Sbjct: 241 QVNLPGGDLFISWKGLGYPLYMIGSATYIYDGCINL 276
>ref|YP_278082.1| diaminopimelate epimerase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gb|AAZ41205.1| diaminopimelate epimerase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 274
Score = 351 bits (900), Expect = 3e-95
Identities = 164/274 (59%), Positives = 209/274 (76%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
M+F+KM+GLGNDF+++DAVTQN+ + E IR L+DR GVGFDQLL+VEPPYDP +DFH
Sbjct: 1 MRFTKMNGLGNDFVIIDAVTQNIHLTSENIRYLSDRFYGVGFDQLLIVEPPYDPAIDFHC 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RI+N+DG+EV QCGNG RC A+FV LK LTNKR+I +ST ++L++ +D+ V VNMG
Sbjct: 61 RIYNSDGTEVNQCGNGMRCVAQFVCLKKLTNKRNIHISTRANHIILSIMNDNRVSVNMGA 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F+P +PF ++ +KTYI+ Q ILCGVVSMGNPHC+I V+ ++ V +LG LE
Sbjct: 121 PIFDPKLIPFYISQYQKTYILFLPTQIILCGVVSMGNPHCIILVEKIENIQVTSLGSALE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H FPER N+ FMQ++ +IRLRVYERG GETQACG+ ACAAVAVGIQQGLL E V V
Sbjct: 181 DHHCFPERVNVSFMQIINCNNIRLRVYERGVGETQACGTAACAAVAVGIQQGLLYESVNV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
LPGG + + WKG + LYMTG +VYDG+I+L
Sbjct: 241 NLPGGTISVNWKGASNALYMTGSTSYVYDGYINL 274
>ref|YP_957783.1| Diaminopimelate epimerase [Marinobacter aquaeolei VT8]
gb|ABM17596.1| Diaminopimelate epimerase [Marinobacter aquaeolei VT8]
Length = 308
Score = 337 bits (865), Expect = 3e-91
Identities = 169/274 (61%), Positives = 202/274 (73%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMVVDA++Q +P+ IR LADR+ G+GFDQLLVVEPP P++DF Y
Sbjct: 12 LRFTKMHGLGNDFMVVDAISQPFRLAPDTIRELADRNFGIGFDQLLVVEPPGLPDVDFRY 71
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFVR + LTNKR IRV TA G + L V D LV VNMG
Sbjct: 72 RIFNADGSEVEQCGNGARCFARFVRDQRLTNKRVIRVQTAKGVIELKVGRDGLVAVNMGV 131
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P P A+PF A++ + Y + QT+ +SMGNPH V+ VD+VDTA VE+LGP LE
Sbjct: 132 PELNPPAIPFAADQRKDVYTVDVNGQTVELSAISMGNPHGVLVVDNVDTAPVESLGPQLE 191
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP RANIGF+QV+ R H RLRV+ERG+GET ACGSGACAAV G +GLL V V
Sbjct: 192 KHPRFPARANIGFLQVIDRRHARLRVFERGSGETLACGSGACAAVVAGCLRGLLDSRVEV 251
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
EL GGRL I W+G P+ M GPA V++G + L
Sbjct: 252 ELRGGRLVIEWQGEDTPVMMEGPATTVFEGQLRL 285
>ref|YP_544308.1| Diaminopimelate epimerase [Methylobacillus flagellatus KT]
gb|ABE48467.1| Diaminopimelate epimerase [Methylobacillus flagellatus KT]
Length = 290
Score = 335 bits (859), Expect = 2e-90
Identities = 163/274 (59%), Positives = 204/274 (74%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ F+KM G+GNDF+VVD ++ V + IRRLADRH G+GFDQLL+VE P +DF Y
Sbjct: 15 LSFTKMQGIGNDFIVVDGYSRPVSLDADTIRRLADRHFGIGFDQLLLVERPTVEGVDFRY 74
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV QCGNGARCF R+V K LT+KR+IRV TA G ++ + D+ LV VNMGE
Sbjct: 75 RIFNADGGEVEQCGNGARCFVRYVHDKSLTSKREIRVQTARGIILPRLEDNGLVTVNMGE 134
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP+ VPF A++ TY+++ A+Q + V SMGNPH V V+DVDTA VE LGP++E
Sbjct: 135 PRFEPAEVPFIADREAMTYLLQVADQALEISVASMGNPHAVTVVEDVDTAPVERLGPLVE 194
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP+R N GFMQ+V HIRLRV+ERG+GET ACG+GACAAVA GI++GLL VRV
Sbjct: 195 RHERFPQRVNAGFMQIVDEHHIRLRVFERGSGETLACGTGACAAVASGIRRGLLQSPVRV 254
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
GG L IAW+G G P++MTGPA V++G I +
Sbjct: 255 ATRGGELIIAWEGGGQPVWMTGPAETVFEGSIDI 288
>ref|ZP_01525327.1| diaminopimelate epimerase [Pseudomonas mendocina ymp]
gb|EAV23635.1| diaminopimelate epimerase [Pseudomonas mendocina ymp]
Length = 276
Score = 335 bits (858), Expect = 2e-90
Identities = 159/274 (58%), Positives = 203/274 (74%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D ++Q+ P+ ++ DRH GVGFDQLL+VEPP P++DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLISQHAHVQPKHAKQWGDRHTGVGFDQLLIVEPPSHPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN+DGSEV QCGNGARCFARFV K LT K+ IRV T +G + L V +D V VNMG
Sbjct: 63 RIFNSDGSEVEQCGNGARCFARFVLDKRLTTKKTIRVETKSGVIELRVQNDGQVCVNMGA 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EP+ VPF+A +A TY + Q++ +SMGNPH V++VD+VD+A V TLGP LE
Sbjct: 123 PRLEPAQVPFQAEQAALTYRVDVEGQSVELAALSMGNPHAVLRVDNVDSAPVHTLGPKLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP+R N+GF+QV+ R+H RLRV+ERGAGETQACG+GACAA I+QG + V++
Sbjct: 183 HHPRFPQRVNVGFLQVLDRKHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPVQL 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
ELPGG+L I W G G P+ MTGPA VY+G + L
Sbjct: 243 ELPGGKLSIEWAGEGQPVMMTGPAARVYEGQVRL 276
>ref|YP_431635.1| diaminopimelate epimerase [Hahella chejuensis KCTC 2396]
gb|ABC27210.1| diaminopimelate epimerase [Hahella chejuensis KCTC 2396]
Length = 276
Score = 333 bits (855), Expect = 4e-90
Identities = 164/274 (59%), Positives = 199/274 (72%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMVVD ++Q+ F PE +RRLADR+ GVGFDQLL+VEPP P+ DF Y
Sbjct: 3 IKFTKMHGLGNDFMVVDLISQHAHFRPEQVRRLADRNFGVGFDQLLIVEPPGRPDADFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV+ LTNK++IRV T G + L V D LV V+MG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVKENRLTNKKNIRVETKKGIIELIVNKDGLVTVDMGA 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P P+ +PF A E Y + VSMGNPH V+ VDDV+ A V LG LE
Sbjct: 123 PRLAPADIPFVAETQEAIYPIEVNGVMYEISAVSMGNPHGVLVVDDVNKAPVHKLGKALE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+H RFPERANIGF+QVV R +LRV+ERGAGET ACG+GACAAV G +GLL +V +
Sbjct: 183 NHPRFPERANIGFLQVVHRRFAKLRVFERGAGETLACGTGACAAVVAGRLRGLLDRKVEI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGG L I+W+G GHP+ MTGPAV V+DG + +
Sbjct: 243 KLPGGNLKISWEGEGHPVMMTGPAVRVFDGQVRI 276
>gb|ABC25246.1| diaminopimelate epimerase [uncultured marine bacterium Ant4D3]
Length = 276
Score = 327 bits (838), Expect = 4e-88
Identities = 165/274 (60%), Positives = 194/274 (70%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMVVD ++Q V S E IR L DR+ GVGFDQLL+VE P P++DF Y
Sbjct: 3 LRFAKMHGLGNDFMVVDLISQRVHLSAEQIRCLGDRNTGVGFDQLLLVETPQSPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN+DG+EV CGNGARCFARFV + LT KRDI V T+NGRM L + D V V+MGE
Sbjct: 63 RIFNSDGTEVEHCGNGARCFARFVHDQRLTGKRDIAVQTSNGRMGLKMLKDHWVEVDMGE 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P PS VPF A +Y + Q+ GVVSMGNPH VI VDDV +A V LG LE
Sbjct: 123 PVLLPSLVPFDAPAQAPSYRLEHNGQSYTIGVVSMGNPHAVIVVDDVASAPVVELGTKLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP +ANIGFMQ++ R I+LRV+ERG GET+ACG+GACAAV G QQGLL V
Sbjct: 183 QHPRFPNKANIGFMQIINRNTIKLRVFERGVGETKACGTGACAAVVAGQQQGLLGTNVTA 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+L GG L I W+GPGH L M GP HVY+G I L
Sbjct: 243 QLTGGDLTIDWQGPGHHLLMNGPTTHVYEGQIKL 276
>gb|EAG69978.1| unknown [environmental sequence]
Length = 229
Score = 327 bits (837), Expect = 5e-88
Identities = 156/226 (69%), Positives = 181/226 (80%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHGLGNDFMV+DAV+QNVF + E I++LADR+ GVGFDQLL+VEPPYDP+LDFHYRIFNA
Sbjct: 1 MHGLGNDFMVIDAVSQNVFLTKEQIKKLADRNFGVGFDQLLMVEPPYDPDLDFHYRIFNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DGSEV QCGNGARCFA+FVR KGLTNK I VST +G++ L + D V VNMG P F+P
Sbjct: 61 DGSEVEQCGNGARCFAKFVRHKGLTNKYKISVSTKSGKITLYIEQDGQVTVNMGVPQFDP 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
VPF+A K E YI+ + + T LCGVVSMGNPH VI VDD+ TA V GPV E+HERF
Sbjct: 121 VKVPFKAQKQELNYILHSEDATTLCGVVSMGNPHAVILVDDIQTAPVHQWGPVFENHERF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231
PERANIGFMQV+ H++LRV+ERGAGET ACG+GACAA VG Q
Sbjct: 181 PERANIGFMQVLSPSHVKLRVWERGAGETLACGTGACAAAVVGQMQ 226
>gb|AAC44326.1| diaminopimelate epimerase
Length = 198
Score = 327 bits (837), Expect = 5e-88
Identities = 156/185 (84%), Positives = 170/185 (91%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
MQFSKMHGLGNDFMVVDAVTQNV+FSPELIRRLADRH GVGFDQ+LVVEPPYDPELDFHY
Sbjct: 1 MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV+QCGNGARCFARFVRLKGLTNKR+I VST GRM+L+VT+D+ V VNMGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVRLKGLTNKREISVSTQTGRMILSVTEDEQVCVNMGE 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P+FEP VPFRA KA+KTYI+RAAE T+LCGVVSMGNPHCV+QVDDV A V LGPVLE
Sbjct: 121 PDFEPQTVPFRAAKAQKTYILRAAEHTVLCGVVSMGNPHCVMQVDDVSVANVALLGPVLE 180
Query: 181 SHERF 185
+HERF
Sbjct: 181 NHERF 185
>ref|ZP_01164869.1| diaminopimelate epimerase [Oceanospirillum sp. MED92]
gb|EAR62866.1| diaminopimelate epimerase [Oceanospirillum sp. MED92]
Length = 280
Score = 325 bits (834), Expect = 1e-87
Identities = 159/276 (57%), Positives = 198/276 (71%), Gaps = 4/276 (1%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D VTQ V +P+L+++L DR+ GVGFDQLL+VEPP +P++DF Y
Sbjct: 3 VRFTKMHGLGNDFMVLDLVTQRVKVTPKLVKKLGDRNFGVGFDQLLIVEPPSEPDIDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN DGSEV CGNGARCFA+FVR K LT K ++ V TANG+M L + D V VNMG
Sbjct: 63 RIFNQDGSEVENCGNGARCFAKFVRDKRLTGKSEVVVQTANGQMTLKIHPDKRVEVNMGA 122
Query: 121 PNFEPSAVPFRANKAEKTYI----MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176
P P VPF+A++ TY + +Q + +SMGNPH V+ VD + A VETLG
Sbjct: 123 PILAPVDVPFQADQKATTYAIDVPLSQGDQQVELSAISMGNPHGVLIVDSTENAPVETLG 182
Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236
P LE+HERFP +ANIGFMQV+ R + LRV+ERG GET ACG+GACAAV G +G+L
Sbjct: 183 PALEAHERFPAKANIGFMQVISRNEVNLRVFERGVGETIACGTGACAAVVAGKLRGVLDM 242
Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272
V V LPGG L+I W G G P+ MTGPA VY+G I
Sbjct: 243 PVTVHLPGGDLEIEWHGEGQPVIMTGPATTVYEGQI 278
>ref|YP_575156.1| Diaminopimelate epimerase [Chromohalobacter salexigens DSM 3043]
gb|ABE60457.1| Diaminopimelate epimerase [Chromohalobacter salexigens DSM 3043]
Length = 277
Score = 325 bits (833), Expect = 2e-87
Identities = 160/274 (58%), Positives = 194/274 (70%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ F+KMHGLGNDF+V+D +TQ E IR+LADRH+G+GFDQLL+VEPP DPE+DF Y
Sbjct: 3 LHFTKMHGLGNDFVVIDLITQRARLDTERIRQLADRHVGIGFDQLLLVEPPRDPEMDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG+EV CGNGARCFARFVR LT+KR+IRV T G + L V DD+ +RV+MG
Sbjct: 63 RIFNADGNEVENCGNGARCFARFVRDNRLTHKREIRVETQAGPLTLRVEDDERIRVDMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F P VPF A + + +T G VSMGNPH V++VDDV A V LGP++E
Sbjct: 123 PRFAPEVVPFDAPADAPAHCLEVDGETWDIGAVSMGNPHAVLRVDDVAQAPVARLGPLIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP N+GF+QVV R RLRV+ERG+GET ACG+GACAAVA GI++G L V V
Sbjct: 183 RHPRFPRGVNVGFLQVVSRHEARLRVFERGSGETLACGTGACAAVAHGIRRGWLESPVDV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
LPGG L +AW P L MTGPA V++G I L
Sbjct: 243 HLPGGTLTLAWPAPDASLMMTGPATSVFEGRIAL 276
>ref|ZP_00899586.1| Diaminopimelate epimerase [Pseudomonas putida F1]
gb|EAP51264.1| Diaminopimelate epimerase [Pseudomonas putida F1]
Length = 276
Score = 325 bits (832), Expect = 2e-87
Identities = 158/274 (57%), Positives = 195/274 (71%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DRH G+GFDQLL+VE P +PE+DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPNNPEVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV K LT K+ IRV T +G +VL V +D V VNMG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKSGIIVLDVQNDGQVSVNMGP 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F P+ +PF A+ +Y + Q VSMGNPH V++VDDV TA V LGP +E
Sbjct: 123 PRFIPAEIPFVADAQAPSYPLVVDGQLYSIAAVSMGNPHAVLRVDDVSTAPVHELGPKIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+H RFP+R N GF+QV+ R LRV+ERGAGETQACG+GACAA I QG + V +
Sbjct: 183 NHPRFPQRVNAGFIQVIDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDSPVSL 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPG P+ MTGPAV VY+G + L
Sbjct: 243 DLPGGRLHIEWAGPGKPVMMTGPAVRVYEGQVRL 276
>ref|ZP_01297566.1| hypothetical protein PaerP_01000528 [Pseudomonas aeruginosa PA7]
ref|ZP_01368297.1| hypothetical protein PaerPA_01005455 [Pseudomonas aeruginosa PACS2]
ref|YP_793752.1| diaminopimelate epimerase [Pseudomonas aeruginosa UCBPP-PA14]
gb|ABJ14663.1| diaminopimelate epimerase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 276
Score = 324 bits (830), Expect = 4e-87
Identities = 155/274 (56%), Positives = 199/274 (72%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DR+ GVGFDQLL+VE P P++DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHVQPKHVKLWGDRNTGVGFDQLLIVEAPSSPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV+ K LT K+ IRV T G + L + D V V+MG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVQDKRLTVKKSIRVETKGGIIELNIRPDGQVTVDMGP 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P P+ +PF+A + +Y + Q + VSMGNPH V++V++VD+A V +LGP LE
Sbjct: 123 PRLAPAEIPFQAEREALSYEIEVNGQRVELAAVSMGNPHGVLRVENVDSAPVHSLGPQLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP++ANIGF+QV+ H RLRV+ERG GETQACG+GACAA GI+QG L V++
Sbjct: 183 VHPRFPKKANIGFLQVLDPHHARLRVWERGVGETQACGTGACAAAVAGIRQGWLQSPVQI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPG P+ MTGPAV VY+G + L
Sbjct: 243 DLPGGRLHIEWAGPGQPVMMTGPAVRVYEGQVRL 276
>ref|YP_694052.1| diaminopimelate epimerase [Alcanivorax borkumensis SK2]
emb|CAL17780.1| diaminopimelate epimerase [Alcanivorax borkumensis SK2]
Length = 281
Score = 323 bits (829), Expect = 5e-87
Identities = 163/282 (57%), Positives = 204/282 (72%), Gaps = 13/282 (4%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPEL--------IRRLADRHLGVGFDQLLVVEPPY 52
++F+KMHGLGNDFMV+D + Q++ PE IRRLADR GVGFDQ+L+V+P
Sbjct: 3 LRFTKMHGLGNDFMVIDGIRQSL---PETGLPLPADEIRRLADRKFGVGFDQMLIVQPAQ 59
Query: 53 DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD 112
+ DF YRI NADGSEV+QCGNGARCFARFVR +GLT+K+ IRV TA G+M L+VTDDD
Sbjct: 60 G-DADFRYRILNADGSEVSQCGNGARCFARFVREQGLTDKKSIRVETAAGQMTLSVTDDD 118
Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172
+ V+MG P + P A+P A Y + + Q G V +GNPHC + V++VDTA V
Sbjct: 119 QITVDMGAPRWAPDAIPMTAKAEADNYFLVSGTQAWDVGAVGLGNPHCTLLVENVDTAPV 178
Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232
+T+GP+LESHE+FPERAN+GFMQ+V R IRLRVYERGAGET ACGSGACAAV +G ++
Sbjct: 179 DTVGPLLESHEQFPERANVGFMQIVSRNEIRLRVYERGAGETLACGSGACAAVVIGQRRD 238
Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L + V V LPGG L + + G G + MTGPA HVYDG I +
Sbjct: 239 WLDDTVTVHLPGGTLHVCYDGQG-GIQMTGPASHVYDGAIEI 279
>gb|AAT51031.1| PA5278 [synthetic construct]
Length = 277
Score = 323 bits (829), Expect = 5e-87
Identities = 154/274 (56%), Positives = 199/274 (72%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DR+ G+GFDQLL+VE P P++DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHVQPKHVKLWGDRNTGIGFDQLLIVEAPSSPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV+ K LT K+ IRV T G + L + D V V+MG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVQDKRLTVKKSIRVETKGGIIELNIRPDGQVTVDMGP 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P P+ +PF+A + +Y + Q + VSMGNPH V++V++VD+A V +LGP LE
Sbjct: 123 PRLAPAEIPFQAEREALSYEIEVNGQRVELAAVSMGNPHGVLRVENVDSAPVHSLGPQLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP++ANIGF+QV+ H RLRV+ERG GETQACG+GACAA GI+QG L V++
Sbjct: 183 VHPRFPKKANIGFLQVLDPHHARLRVWERGVGETQACGTGACAAAVAGIRQGWLQSPVQI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPG P+ MTGPAV VY+G + L
Sbjct: 243 DLPGGRLHIEWAGPGQPVMMTGPAVRVYEGQVRL 276
>ref|ZP_00417075.1| Diaminopimelate epimerase [Azotobacter vinelandii AvOP]
gb|EAM06715.1| Diaminopimelate epimerase [Azotobacter vinelandii AvOP]
Length = 290
Score = 323 bits (829), Expect = 5e-87
Identities = 157/274 (57%), Positives = 196/274 (71%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D VTQ+ P+ ++ DRH G+GFDQLL+VEPP P++DF Y
Sbjct: 17 LRFTKMHGLGNDFMVIDLVTQHAHIQPKHAKQWGDRHTGIGFDQLLIVEPPSRPDVDFRY 76
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV K LT K+ IRV T +G + L V D V V+MG
Sbjct: 77 RIFNADGSEVEQCGNGARCFARFVLDKRLTVKKRIRVETRSGVIELDVRPDGQVCVDMGP 136
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EP +PF+A A Y + + +SMGNPH V++V++V++A V LGP LE
Sbjct: 137 PRLEPREIPFQAENAALDYQVEVDGCEVELAALSMGNPHAVLRVENVESAPVHELGPKLE 196
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP+R N+GF+QVV R+H RLRV+ERGAGETQACG+GACAA I+QG + V V
Sbjct: 197 HHPRFPQRVNVGFLQVVDRQHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPVLV 256
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL IAW GP + MTGPAV VY+G + L
Sbjct: 257 DLPGGRLSIAWAGPDQSVMMTGPAVRVYEGQVRL 290
>ref|NP_253965.1| diaminopimelate epimerase [Pseudomonas aeruginosa PAO1]
ref|ZP_00966288.1| COG0253: Diaminopimelate epimerase [Pseudomonas aeruginosa C3719]
ref|ZP_00972081.1| COG0253: Diaminopimelate epimerase [Pseudomonas aeruginosa 2192]
sp|Q51564|DAPF_PSEAE Diaminopimelate epimerase (DAP epimerase)
gb|AAG08663.1|AE004940_7 diaminopimelate epimerase [Pseudomonas aeruginosa PAO1]
Length = 276
Score = 323 bits (829), Expect = 5e-87
Identities = 154/274 (56%), Positives = 199/274 (72%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DR+ G+GFDQLL+VE P P++DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHVQPKHVKLWGDRNTGIGFDQLLIVEAPSSPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV+ K LT K+ IRV T G + L + D V V+MG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVQDKRLTVKKSIRVETKGGIIELNIRPDGQVTVDMGP 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P P+ +PF+A + +Y + Q + VSMGNPH V++V++VD+A V +LGP LE
Sbjct: 123 PRLAPAEIPFQAEREALSYEIEVNGQRVELAAVSMGNPHGVLRVENVDSAPVHSLGPQLE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP++ANIGF+QV+ H RLRV+ERG GETQACG+GACAA GI+QG L V++
Sbjct: 183 VHPRFPKKANIGFLQVLDPHHARLRVWERGVGETQACGTGACAAAVAGIRQGWLQSPVQI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPG P+ MTGPAV VY+G + L
Sbjct: 243 DLPGGRLHIEWAGPGQPVMMTGPAVRVYEGQVRL 276
>ref|NP_747329.1| diaminopimelate epimerase [Pseudomonas putida KT2440]
gb|AAN70793.1|AE016723_5 diaminopimelate epimerase [Pseudomonas putida KT2440]
Length = 287
Score = 323 bits (827), Expect = 8e-87
Identities = 158/274 (57%), Positives = 194/274 (70%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DRH GVGFDQLL+VE P +PE+DF Y
Sbjct: 14 LRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGVGFDQLLIVEAPNNPEVDFRY 73
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV K LT K+ IRV T +G +VL V +D V V+MG
Sbjct: 74 RIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKSGIIVLDVQNDGQVSVDMGP 133
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F P+ +PF A+ Y + Q VSMGNPH V++VDDV TA V LGP +E
Sbjct: 134 PRFIPAEIPFVADAQALNYPLEVDGQLHSIAAVSMGNPHAVLRVDDVQTAPVHELGPKIE 193
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+H RFP+R N GF+QV+ R LRV+ERGAGETQACG+GACAA I QG + V +
Sbjct: 194 NHPRFPQRVNAGFIQVIDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDSPVSL 253
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPG P+ MTGPAV VY+G + L
Sbjct: 254 DLPGGRLHIEWAGPGKPVMMTGPAVRVYEGQVRL 287
>sp|Q88CF3|DAPF_PSEPK Diaminopimelate epimerase (DAP epimerase)
Length = 276
Score = 323 bits (827), Expect = 8e-87
Identities = 158/274 (57%), Positives = 194/274 (70%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DRH GVGFDQLL+VE P +PE+DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGVGFDQLLIVEAPNNPEVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV K LT K+ IRV T +G +VL V +D V V+MG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKSGIIVLDVQNDGQVSVDMGP 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F P+ +PF A+ Y + Q VSMGNPH V++VDDV TA V LGP +E
Sbjct: 123 PRFIPAEIPFVADAQALNYPLEVDGQLHSIAAVSMGNPHAVLRVDDVQTAPVHELGPKIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+H RFP+R N GF+QV+ R LRV+ERGAGETQACG+GACAA I QG + V +
Sbjct: 183 NHPRFPQRVNAGFIQVIDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDSPVSL 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPG P+ MTGPAV VY+G + L
Sbjct: 243 DLPGGRLHIEWAGPGKPVMMTGPAVRVYEGQVRL 276
>ref|NP_790075.1| diaminopimelate epimerase [Pseudomonas syringae pv. tomato str.
DC3000]
sp|Q88B09|DAPF_PSESM Diaminopimelate epimerase (DAP epimerase)
gb|AAO53770.1| diaminopimelate epimerase [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 276
Score = 323 bits (827), Expect = 8e-87
Identities = 151/274 (55%), Positives = 195/274 (71%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DRH G+GFDQLL+VE P +P++DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLLVEAPNNPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN+DGSEV QCGNGARCFARFV K LT K+ IRV T G + L + D + V+MG
Sbjct: 63 RIFNSDGSEVEQCGNGARCFARFVLDKRLTAKKQIRVETKGGIIELEIRSDGQISVDMGP 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P P +PF+A + K+Y + QT+ VSMGNPH V++VDD++ A V TLGP +E
Sbjct: 123 PRLVPEEIPFQAAEQAKSYSLDVDGQTVELAAVSMGNPHAVLRVDDINNAPVHTLGPKIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP R N+GF+ VV R+ +LRV+ERGAGETQACG+GACAA I QG + + +
Sbjct: 183 HHPRFPARVNVGFLHVVDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPLLI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPGHP+ MTGPA VY+G + L
Sbjct: 243 DLPGGRLSIEWAGPGHPVMMTGPATRVYEGQVRL 276
>ref|ZP_01615663.1| diaminopimelate epimerase [marine gamma proteobacterium HTCC2143]
gb|EAW32746.1| diaminopimelate epimerase [marine gamma proteobacterium HTCC2143]
Length = 276
Score = 321 bits (823), Expect = 2e-86
Identities = 153/274 (55%), Positives = 197/274 (71%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KM GLGNDF+V+D VTQ E +R+LADRH G+G DQLLVVE P P++DF Y
Sbjct: 3 LRFTKMQGLGNDFVVLDLVTQRFNLQAEHVRKLADRHFGIGCDQLLVVETPMQPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RI+N DG+EV QCGNGARCFA+FVR K LT K IRV T +G + L+V +D +RVNMG+
Sbjct: 63 RIYNGDGNEVEQCGNGARCFAKFVRDKKLTGKNKIRVETNSGIIELSVMEDRQIRVNMGK 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EP+ +PF A+K TY + ++ + VS+GNPH +I V+D+DTA V LGP +E
Sbjct: 123 PLLEPADIPFTASKRANTYTLLVDDEEVSISAVSVGNPHAIITVEDIDTAPVSILGPAIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H FP+R N+GFMQVV R+ I LRV+ERGAGET ACGSGACAA+ G QGLL +++
Sbjct: 183 CHTDFPQRVNVGFMQVVSRKEINLRVFERGAGETLACGSGACAAMVSGQLQGLLDQQITA 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L GG L + W G GHP+ MTGPA +V++G I L
Sbjct: 243 NLSGGSLTLEWHGEGHPVMMTGPASNVFEGQITL 276
>ref|YP_113353.1| diaminopimelate epimerase [Methylococcus capsulatus str. Bath]
gb|AAU93033.1| diaminopimelate epimerase [Methylococcus capsulatus str. Bath]
Length = 275
Score = 320 bits (820), Expect = 5e-86
Identities = 160/270 (59%), Positives = 191/270 (70%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KM GLGNDF+V+DA+ Q V +RRLADRH G+G DQ+L+VEPP E+DF Y
Sbjct: 2 LRFTKMQGLGNDFVVIDAIHQTVNLDEAALRRLADRHYGIGCDQILLVEPPASDEVDFRY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV+QCGNGARCFARFVR KGL ++ +IRV TA GRMVL + VRV MG
Sbjct: 62 RIFNADGGEVSQCGNGARCFARFVREKGLIDRDEIRVETAAGRMVLWLEAGGEVRVEMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P P+ VP A++ Y + G VS+GNPH VI V DVD A V +G VLE
Sbjct: 122 PRHAPAEVPLLADRERSVYTVNVEGVDWQFGAVSVGNPHAVITVADVDEAPVARVGTVLE 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HE FPERANIGFMQV+ H RLRVYERG GET ACGSGACAA VGI QG L VR+
Sbjct: 182 RHELFPERANIGFMQVLDLHHARLRVYERGTGETLACGSGACAAAVVGILQGTLESPVRI 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
+LPGG L I W+G G P+Y++GPAV V++G
Sbjct: 242 DLPGGTLRIGWQGRGTPVYLSGPAVTVFEG 271
>ref|ZP_01597510.1| Diaminopimelate epimerase [Marinomonas sp. MWYL1]
gb|EAV92047.1| Diaminopimelate epimerase [Marinomonas sp. MWYL1]
Length = 276
Score = 318 bits (814), Expect = 3e-85
Identities = 155/274 (56%), Positives = 198/274 (72%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDF+VVDAV++ VFF+ + I +L+DR+ G+GFDQLLVVEPP DP++DF Y
Sbjct: 3 LKFTKMHGLGNDFVVVDAVSRKVFFNKQQIEKLSDRNWGIGFDQLLVVEPPTDPDMDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RI+N+DGSEV CGNGARCFA+FV + LTNKR I V T G + L V D LV V+MG
Sbjct: 63 RIYNSDGSEVEHCGNGARCFAKFVLDRELTNKRIINVETKRGAIQLRVLDGGLVTVDMGA 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P+FEP +PF A + Y + A + L VS+GNPH VI+VD + V +G ++E
Sbjct: 123 PSFEPQDLPFTAEPCDVLYSIMAEDTEYLITPVSVGNPHAVIKVDQLIDDEVAKVGALIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP + N+GFMQVV + I LRVYERG GETQACG+GACAAV GI+QG L+ +V
Sbjct: 183 CHERFPRKVNVGFMQVVNPDEINLRVYERGVGETQACGTGACAAVVAGIKQGWLSPKVTA 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L GG L I W+G G P+ MTGPA V++G I+L
Sbjct: 243 HLRGGDLHIEWQGEGSPILMTGPAEKVFEGQIYL 276
>ref|ZP_01112788.1| diaminopimelate epimerase [Reinekea sp. MED297]
gb|EAR11252.1| diaminopimelate epimerase [Reinekea sp. MED297]
Length = 274
Score = 318 bits (814), Expect = 3e-85
Identities = 159/272 (58%), Positives = 189/272 (69%), Gaps = 1/272 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D VTQ V S ELI + ADRH GVGFDQLL+VEPP P+ DF Y
Sbjct: 3 LKFTKMHGLGNDFMVIDGVTQAVELSAELIEQWADRHFGVGFDQLLLVEPPTRPDRDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV CGNGARCFARFV L IRV TA G + L V D+ V V+MG
Sbjct: 63 RIFNADGSEVENCGNGARCFARFVLDNQLIQNTTIRVETAGGDLELRVEDNGEVTVDMGR 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P P +PF A+ Y + ++T+ +++GNPHCV +VDDV TA VE LGP LE
Sbjct: 123 PRTRPDKIPFLADDKAALYDINVLDETLSISAINVGNPHCVTRVDDVLTADVERLGPALE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HERFP+R N GFMQ+V R +IRLRV+ERG GET ACG+GACAAV G+ G L V V
Sbjct: 183 DHERFPQRVNAGFMQIVDRSNIRLRVFERGVGETLACGTGACAAVVAGVLNGWLDHTVSV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272
LPGG+L I W G G+ + MTGPA VY+G I
Sbjct: 243 TLPGGKLTIHWAGEGN-ILMTGPATRVYEGVI 273
>ref|ZP_01273191.1| Diaminopimelate epimerase [Psychrobacter sp. PRwf-1]
gb|EAS85516.1| Diaminopimelate epimerase [Psychrobacter sp. PRwf-1]
Length = 293
Score = 317 bits (811), Expect = 6e-85
Identities = 159/275 (57%), Positives = 200/275 (72%), Gaps = 6/275 (2%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D VTQ + +PELI LADR+LG+GFDQLLVVEPP P++DF Y
Sbjct: 3 IEFTKMHGLGNDFMVIDLVTQRLELTPELITLLADRNLGIGFDQLLVVEPPMRPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN+DGSEV QCGNGARCFARFV+ + L+ K+ IRV T +G + L+ + V V+MG+
Sbjct: 63 RIFNSDGSEVEQCGNGARCFARFVQARKLSFKQRIRVETKSGILTLSTDNYGWVEVDMGK 122
Query: 121 PNFEPSAVPF---RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177
P FEP+ +PF K + Y + + V +MGNPH VI+VDD+ TA VE LG
Sbjct: 123 PRFEPAEIPFTPKAITKIQNAYHLDVEGTPVQLYVANMGNPHAVIKVDDILTADVEKLGK 182
Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL--A 235
+ESH FPER N+GFMQV+ + HIRLRVYERG GETQACG+GACAAVA GI++G L
Sbjct: 183 AIESHPAFPERVNVGFMQVMNQRHIRLRVYERGVGETQACGTGACAAVATGIREGWLDEG 242
Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
EE+R +L GG L I W PG+ + MTGP VY+G
Sbjct: 243 EEIRAQLYGGSLLIRW-SPGYSVMMTGPTAFVYEG 276
>ref|YP_277092.1| diaminopimelate epimerase [Pseudomonas syringae pv. phaseolicola
1448A]
gb|AAZ33043.1| diaminopimelate epimerase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 276
Score = 317 bits (811), Expect = 6e-85
Identities = 150/274 (54%), Positives = 192/274 (70%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DRH G+GFDQLL+VE P +P++DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLLVEAPNNPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN+DGSEV QCGNGARCFARFV K LT K+ IRV T +G + L + D + V+MG
Sbjct: 63 RIFNSDGSEVEQCGNGARCFARFVLDKRLTAKKQIRVETKSGIIELDIRSDGQISVDMGP 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F P +PF A + Y + Q I VSMGNPH V++VDD++ A V LGP +E
Sbjct: 123 PRFVPEEIPFEAAEQATRYNVEVDGQNIELAAVSMGNPHAVLRVDDINNAPVHELGPKIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP R N+GF+ VV R+ +LRV+ERGAGETQACG+GACAA I QG + + +
Sbjct: 183 HHPRFPARVNVGFLHVVDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPLLI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPGH + MTGPAV VY+G + L
Sbjct: 243 DLPGGRLSIEWAGPGHSVMMTGPAVRVYEGQVRL 276
>ref|YP_263071.1| diaminopimelate epimerase [Pseudomonas fluorescens Pf-5]
gb|AAY95202.1| diaminopimelate epimerase [Pseudomonas fluorescens Pf-5]
Length = 276
Score = 317 bits (811), Expect = 6e-85
Identities = 148/274 (54%), Positives = 196/274 (71%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DR+ G+GFDQLL+VE P +P++DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRNTGIGFDQLLIVEAPSNPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN+DGSEV QCGNGARCFARFV K LT KR IRV T +G + L + +D + VNMG
Sbjct: 63 RIFNSDGSEVEQCGNGARCFARFVLDKRLTTKRQIRVETKSGVIELDIRNDGQISVNMGA 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P P+ +PF+A +Y + + + VSMGNPH V++VDD+++A V LGP +E
Sbjct: 123 PRLVPADIPFQAPAQADSYTLDVDGRQVQLAAVSMGNPHAVLRVDDINSAPVHELGPKIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP R N+GF+QV+ R+ +LRV+ERGAGETQACG+GACAA I QG + + +
Sbjct: 183 HHPRFPARVNVGFLQVLDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPLLI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPG P+ MTGPAV VY+G + L
Sbjct: 243 DLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL 276
>sp|O05322|DAPF_PSEFL Diaminopimelate epimerase (DAP epimerase)
emb|CAA72944.1| DapF protein [Pseudomonas fluorescens]
Length = 276
Score = 316 bits (809), Expect = 1e-84
Identities = 151/274 (55%), Positives = 193/274 (70%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DRH G+GFDQLL+VE P +P++DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPNNPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV K LT KR IRV T +G + L V D + VNMG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDVRSDGQIGVNMGA 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P P+ +PF+A +Y + T+ VSMGNPH V++V D+++A V LGP +E
Sbjct: 123 PRLVPADIPFQAPAQALSYQVDVDGATVELAAVSMGNPHAVLRVADINSAPVHELGPKIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP R N+GF+QV+ R +LRV+ERGAGETQACG+GACAA I QG + + +
Sbjct: 183 HHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPLLI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPG P+ MTGPAV VY+G + L
Sbjct: 243 DLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL 276
>ref|YP_932098.1| DapF protein [Azoarcus sp. BH72]
emb|CAL93211.1| DapF protein [Azoarcus sp. BH72]
Length = 277
Score = 315 bits (807), Expect = 2e-84
Identities = 159/274 (58%), Positives = 190/274 (69%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDF+V+DA V +P ++ +ADRH GVG DQLLVVEPP E+DF Y
Sbjct: 3 IRFTKMHGLGNDFVVIDATRTPVDLTPARVKAIADRHFGVGCDQLLVVEPPGSDEVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV QCGNGARCF RFV KGLT+KR+IRV T G + + D LV V+MG
Sbjct: 63 RIFNADGGEVEQCGNGARCFVRFVHDKGLTDKREIRVETRAGVIAPALRPDGLVSVDMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P P+ +PF ++ ++ AE T+ VSMGNPH V V DVDTA V G +E
Sbjct: 123 PELSPARIPFVSDSDAWVQPLQLAEDTVAITAVSMGNPHAVQVVADVDTAPVARQGAEIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP R N GFMQVV HIRLRV+ERGAGET ACG+GACAAV GI +GLL VRV
Sbjct: 183 CHPRFPARVNAGFMQVVDAGHIRLRVFERGAGETLACGTGACAAVVAGIGRGLLVSPVRV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
E GG L+IAW GPG P+ MTGPAV V++G + L
Sbjct: 243 ETRGGELEIAWAGPGTPVVMTGPAVTVFEGELEL 276
>ref|YP_351227.1| diaminopimelate epimerase [Pseudomonas fluorescens PfO-1]
gb|ABA77236.1| Diaminopimelate epimerase [Pseudomonas fluorescens PfO-1]
Length = 276
Score = 315 bits (807), Expect = 2e-84
Identities = 150/274 (54%), Positives = 192/274 (70%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ + DRH G+GFDQLL+VE P +P++DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKMWGDRHTGIGFDQLLIVEAPSNPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN+DGSEV QCGNGARCFARFV K LT KR IRV T G + L V +D + VNMG
Sbjct: 63 RIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKGGIIELDVRNDGQIGVNMGA 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P P+ +PF+A + +Y + + VSMGNPH V++V D++TA V LGP +E
Sbjct: 123 PRLVPADIPFQAPEQALSYQVDVDGTPVDLAAVSMGNPHAVLRVSDINTAPVHELGPKIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP R N+GF+QV+ R +LRV+ERGAGETQACG+GACAA I QG + + +
Sbjct: 183 HHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPLLI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPG P+ MTGPAV VY+G + L
Sbjct: 243 DLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL 276
>ref|YP_233294.1| diaminopimelate epimerase [Pseudomonas syringae pv. syringae B728a]
gb|AAY35256.1| Diaminopimelate epimerase [Pseudomonas syringae pv. syringae B728a]
Length = 276
Score = 315 bits (807), Expect = 2e-84
Identities = 149/274 (54%), Positives = 192/274 (70%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DRH G+GFDQLL+VE P +P++DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLLVEAPNNPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN+DGSEV QCGNGARCFARFV K LT K+ IRV T +G + L + D + V+MG
Sbjct: 63 RIFNSDGSEVEQCGNGARCFARFVLDKRLTAKKQIRVETKSGIIELDIRSDGQISVDMGP 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F P +PF A + Y + Q + VSMGNPH V++VDD++ A V LGP +E
Sbjct: 123 PRFVPEEIPFEAAEQATCYTVDVDGQHVDMAAVSMGNPHAVLRVDDINNAPVHELGPKIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP R N+GF+ VV R+ +LRV+ERGAGETQACG+GACAA I QG + + +
Sbjct: 183 HHPRFPARVNVGFLHVVDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPLLI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPGH + MTGPAV VY+G + L
Sbjct: 243 DLPGGRLSIEWAGPGHSVMMTGPAVRVYEGQVRL 276
>ref|ZP_01637674.1| Diaminopimelate epimerase [Pseudomonas putida W619]
gb|EAX19943.1| Diaminopimelate epimerase [Pseudomonas putida W619]
Length = 276
Score = 315 bits (806), Expect = 2e-84
Identities = 153/274 (55%), Positives = 193/274 (70%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DRH G+GFDQLL+VE P +PE+DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPNNPEVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV K LT K+ IRV T G + L V +D V V+MG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKGGIIELDVQNDGQVCVDMGP 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F P+ +PF A++ Y + + VSMGNPH V++VDD+ TA V LGP +E
Sbjct: 123 PRFIPAEIPFVADEQALNYPLEVDGELHSIAAVSMGNPHAVLRVDDIRTAPVHGLGPKIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+H RFP+R N GF+QV+ R LRV+ERGAGETQACG+GACAA I QG + V +
Sbjct: 183 NHPRFPQRVNAGFLQVIDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDSPVSL 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL+I W GPG + MTGPAV VY+G + L
Sbjct: 243 DLPGGRLNIEWAGPGTSVLMTGPAVRVYEGQVRL 276
>ref|YP_610766.1| diaminopimelate epimerase [Pseudomonas entomophila L48]
emb|CAK17983.1| diaminopimelate epimerase [Pseudomonas]
Length = 276
Score = 314 bits (805), Expect = 3e-84
Identities = 154/274 (56%), Positives = 193/274 (70%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D V+Q+ P+ ++ DR+ G+GFDQLL+VE P +P++DF Y
Sbjct: 3 LRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRNTGIGFDQLLIVEAPSNPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV K LT K+ IRV T G + L V +D V V+MG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKGGIIELDVRNDGQVCVDMGP 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F P+ +PF A++ +Y + Q VSMGNPH V++VDDV TA V LGP +E
Sbjct: 123 PRFVPADIPFIADEQALSYPLEVDGQVHQIAAVSMGNPHSVLRVDDVRTAPVHELGPKIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP+R N GF+QVV R LRV+ERGAGETQACG+GACAA I QG + V +
Sbjct: 183 HHPRFPQRVNAGFIQVVDRHRANLRVWERGAGETQACGTGACAAAVAAIAQGWMDSPVTI 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+LPGGRL I W GPG P+ MTGPAV V++G + L
Sbjct: 243 DLPGGRLSIEWAGPGKPVLMTGPAVRVFEGQVRL 276
>ref|ZP_01306407.1| diaminopimelate epimerase [Oceanobacter sp. RED65]
gb|EAT13046.1| diaminopimelate epimerase [Oceanobacter sp. RED65]
Length = 278
Score = 313 bits (803), Expect = 5e-84
Identities = 158/273 (57%), Positives = 193/273 (70%), Gaps = 4/273 (1%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMVVD VTQ+ F PE +R+L+DR G+GFDQLL+VEPP +PE+DF Y
Sbjct: 3 LKFTKMHGLGNDFMVVDLVTQHFAFRPEFVRQLSDRQFGIGFDQLLIVEPPSNPEVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFARFV LT K I+V T++G + L + D V VNMG
Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVHDVRLTAKNPIKVETSSGIIELNIEQDGDVVVNMGA 122
Query: 121 PNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177
F PS +PF A +AE+ + + T G VSMGNPHCV+ VDD+ + V LGP
Sbjct: 123 ARFSPSDLPFNAEQAERYQVQVPLNDGNYTAEFGAVSMGNPHCVMVVDDIHSELVNQLGP 182
Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237
LE HE+FP+R N GFMQ+ R + LRVYERGAG T ACG+GACAAVAV + GL+ +E
Sbjct: 183 QLEGHEQFPKRVNAGFMQIKNRNEMDLRVYERGAGWTLACGTGACAAVAVAHKWGLVDDE 242
Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
V+V LPGG L I W G G + M GP V V+DG
Sbjct: 243 VKVNLPGGALTIRWDGEG-DVIMKGPVVRVFDG 274
>ref|YP_263507.1| probable diaminopimelate epimerase [Psychrobacter arcticus 273-4]
gb|AAZ18073.1| probable diaminopimelate epimerase [Psychrobacter arcticus 273-4]
Length = 295
Score = 313 bits (801), Expect = 8e-84
Identities = 156/275 (56%), Positives = 200/275 (72%), Gaps = 6/275 (2%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D VTQ + + +L++ L DRHLG+GFDQLLVVEPP P++DF Y
Sbjct: 3 IEFTKMHGLGNDFMVIDLVTQRLDLTKDLVQLLGDRHLGIGFDQLLVVEPPMRPDVDFSY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN DG+EV QCGNGARCFARFV+ + L+ K+ +RV TA+G + LT V V+MG+
Sbjct: 63 RIFNTDGTEVEQCGNGARCFARFVQARKLSFKQRLRVETASGIISLTTDHYGWVEVDMGK 122
Query: 121 PNFEPSAVPF---RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177
P FEPS +PF K + Y + + V +MGNPH VI+VDDV A VE+LG
Sbjct: 123 PKFEPSEIPFTPRATTKIQNAYHLDVNGTPVQLYVANMGNPHAVIKVDDVLDADVESLGR 182
Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL--A 235
+ESH FPER N+GFMQV+ + HIRLRVYERG GETQACG+GACAAVA+GI++G L
Sbjct: 183 AIESHPAFPERVNVGFMQVMNQRHIRLRVYERGVGETQACGTGACAAVAIGIREGWLDEG 242
Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
E+VR +L GG + I W+ PG+ + MTGP VY+G
Sbjct: 243 EDVRAQLYGGSMVIKWQ-PGYSVMMTGPTAFVYEG 276
>ref|YP_579488.1| Diaminopimelate epimerase [Psychrobacter cryohalolentis K5]
gb|ABE74004.1| Diaminopimelate epimerase [Psychrobacter cryohalolentis K5]
Length = 295
Score = 312 bits (799), Expect = 1e-83
Identities = 155/275 (56%), Positives = 200/275 (72%), Gaps = 6/275 (2%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDFMV+D VTQ + + +L++ L DRHLG+GFDQLLVVEPP P++DF Y
Sbjct: 3 IEFTKMHGLGNDFMVIDLVTQRLDLTKDLVQLLGDRHLGIGFDQLLVVEPPMRPDVDFSY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN DG+EV QCGNGARCFARFV+ + L+ K+ +RV TA+G + LT V V+MG+
Sbjct: 63 RIFNTDGTEVEQCGNGARCFARFVQARKLSFKQRLRVETASGIISLTTDRYGWVEVDMGK 122
Query: 121 PNFEPSAVPF---RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177
P FEPS +PF K + Y + + V +MGNPH VI+VDDV A VETLG
Sbjct: 123 PKFEPSEIPFTPRAITKIQNAYHLDVNGTPVQLYVANMGNPHAVIKVDDVLDADVETLGK 182
Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL--A 235
+ESH FPER N+GFMQ++ + HIRLRV+ERG GETQACG+GACAAVA+GI++G L
Sbjct: 183 AIESHPAFPERVNVGFMQIMNQRHIRLRVFERGVGETQACGTGACAAVAIGIREGWLDEG 242
Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
E+VR +L GG + I W+ PG+ + MTGP VY+G
Sbjct: 243 EDVRAQLYGGSMVIKWQ-PGYSVMMTGPTAFVYEG 276
>ref|NP_902198.1| diaminopimelate epimerase [Chromobacterium violaceum ATCC 12472]
gb|AAQ60199.1| diaminopimelate epimerase [Chromobacterium violaceum ATCC 12472]
Length = 276
Score = 311 bits (798), Expect = 2e-83
Identities = 159/274 (58%), Positives = 186/274 (67%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++FSKMHGLGNDFMV+D V Q V +PE IR L +R LG+GFDQLL+VEP + DF Y
Sbjct: 3 LKFSKMHGLGNDFMVIDGVRQTVSLTPEQIRLLGNRQLGIGFDQLLLVEPAREAGHDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN DG EV QCGNGARCFA+FVR +GLT K I V TA G + D L RV+MG
Sbjct: 63 RIFNNDGGEVEQCGNGARCFAKFVRDQGLTGKSRIEVETARGVIAPEYLGDGLARVDMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F P+ +PF A+ TY + E G+ SMGNPH V +VDDVD A V +GP +E
Sbjct: 123 PRFRPADLPFLADAEALTYSLPLPEGRCEIGIASMGNPHAVQRVDDVDAAPVAEVGPAIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SH FP+R N GFMQ+V R IRLRVYERGAGET ACG+GACAAV GI+QGLL V V
Sbjct: 183 SHPAFPQRVNAGFMQIVNRGEIRLRVYERGAGETLACGTGACAAVVCGIRQGLLDARVTV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
GG + I W G G P+ MTGPAV V+ G I L
Sbjct: 243 HARGGDIVIEWAGEGSPVIMTGPAVTVFQGEIEL 276
>ref|YP_413223.1| diaminopimelate epimerase [Nitrosospira multiformis ATCC 25196]
gb|ABB75831.1| diaminopimelate epimerase [Nitrosospira multiformis ATCC 25196]
Length = 277
Score = 310 bits (795), Expect = 4e-83
Identities = 153/274 (55%), Positives = 192/274 (70%), Gaps = 1/274 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDF+V+DAV Q + SPE +RRLADRHLGVG DQ+L++E + + DF Y
Sbjct: 3 LKFTKMHGLGNDFIVIDAVNQQISLSPEQLRRLADRHLGVGCDQILLIEKA-EGDADFRY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV QCGNGARCF R+V G+T+K+ +R+ T +G ++ + D V VNMG
Sbjct: 62 RIFNADGGEVEQCGNGARCFVRYVHDHGMTDKQQVRIETLSGVVIPELEADGEVTVNMGV 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F+P +PF A + TY + ++ + VSMGNPH V V D+D A V T GPV+E
Sbjct: 122 PKFDPVEIPFIAEQRAPTYSLSLDDRQVEISSVSMGNPHAVQVVSDLDNAPVLTEGPVIE 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP+R N G+MQVV HIRLRVYERGAGET ACG+GACAA GIQ+GLL VRV
Sbjct: 182 KHSRFPQRVNAGYMQVVDPHHIRLRVYERGAGETLACGTGACAAAVAGIQRGLLESPVRV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
G L I W+G P++MTGPAV V+DG I L
Sbjct: 242 SFSTGDLFIRWEGENQPVWMTGPAVAVFDGEIEL 275
>ref|YP_316284.1| diaminopimelate epimerase [Thiobacillus denitrificans ATCC 25259]
gb|AAZ98479.1| diaminopimelate epimerase [Thiobacillus denitrificans ATCC 25259]
Length = 288
Score = 310 bits (794), Expect = 5e-83
Identities = 156/274 (56%), Positives = 191/274 (69%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDF+V D V Q V +PE RR+ADRH GVG DQ+LVVE P P++DF Y
Sbjct: 14 LRFTKMHGLGNDFVVFDGVNQTVTLTPERCRRIADRHFGVGCDQILVVEKPTRPDVDFRY 73
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV QCGNGARCF RFV GLT+K IRV TA+G + + D V V+MG
Sbjct: 74 RIFNADGGEVEQCGNGARCFVRFVHDHGLTDKTAIRVETASGVIEPRLLADGRVTVDMGA 133
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F P+ VPF A TY ++ + + VVSMGNPH V++V+D+D+A V+ LG V+E
Sbjct: 134 PRFAPAEVPFVAEAEALTYPLKIGQHRLDIAVVSMGNPHAVLRVNDLDSAPVDILGAVIE 193
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SH RFP+R N GFMQV+ IRLRV+ERGAGET ACG+GACAA GI+QG LA V V
Sbjct: 194 SHSRFPQRVNAGFMQVLTPHDIRLRVFERGAGETLACGTGACAAAVSGIRQGALASPVSV 253
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
GG L I W G G P+ MTGPA V++G + L
Sbjct: 254 HTRGGDLVIEWAGAGAPVLMTGPAETVFEGELEL 287
>ref|NP_841651.1| Diaminopimelate epimerase [Nitrosomonas europaea ATCC 19718]
emb|CAD85523.1| Diaminopimelate epimerase [Nitrosomonas europaea ATCC 19718]
Length = 275
Score = 310 bits (794), Expect = 5e-83
Identities = 156/274 (56%), Positives = 193/274 (70%), Gaps = 1/274 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDF+V+DA+ Q+V P IRR ADRH G+GFDQLLVVE P + DF Y
Sbjct: 3 LKFTKMHGLGNDFIVIDAINQSVSLDPATIRRWADRHFGIGFDQLLVVEKPGESG-DFRY 61
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV QCGNGARCFARFVR LT K IRV TA G ++ TV ++ V V+MG
Sbjct: 62 RIFNADGGEVEQCGNGARCFARFVRDHDLTRKNTIRVETACGIIMPTVEENGEVSVDMGI 121
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F+P+ +PF + TY + ++ I VSMGNPH V V D+D A V + GP +E
Sbjct: 122 PRFDPARIPFITQERALTYPLNVNDREIEISAVSMGNPHAVQIVPDIDLAPVTSEGPAIE 181
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SH FPE+ N G+MQ+V R HIRLRV+ERG GET ACG+GACAAV GI +GLL EV+V
Sbjct: 182 SHPFFPEKVNAGYMQIVDRTHIRLRVFERGTGETLACGTGACAAVVSGISRGLLDSEVQV 241
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+ GG L I W+G P++MTGPAV V++G I L
Sbjct: 242 TMRGGNLRIRWEGEDQPVWMTGPAVSVFEGTIDL 275
>ref|ZP_01224101.1| diaminopimelate epimerase [marine gamma proteobacterium HTCC2207]
gb|EAS47108.1| diaminopimelate epimerase [marine gamma proteobacterium HTCC2207]
Length = 274
Score = 310 bits (793), Expect = 7e-83
Identities = 153/274 (55%), Positives = 191/274 (69%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
M+F+KMHGLGNDF+V+DAVTQNV + ++RRLADR G+G DQ+LV+EPP ++DF+Y
Sbjct: 1 MKFTKMHGLGNDFVVIDAVTQNVRITASMVRRLADRKTGIGCDQVLVIEPPSAVDIDFNY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN DG+EV QCGNGARC ARFV + LT K+ I+V T+N M L + + +LV V+MG
Sbjct: 61 RIFNCDGAEVEQCGNGARCLARFVHDRQLTGKKSIQVQTSNRVMTLNLINKNLVAVDMGV 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P +P A+PF+A +A Y + Q VSMGNPH V+ V D++TA V LG LE
Sbjct: 121 PELDPPAIPFQATEAASLYDIDVNGQVQRIAAVSMGNPHAVLTVADINTATVAELGAALE 180
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SHERFP R N+GFMQ+V R I+LRV+ERG GET ACGSGACAA IQQ L+ V V
Sbjct: 181 SHERFPNRVNVGFMQIVDRSEIKLRVFERGVGETDACGSGACAAAVAAIQQELVDSPVTV 240
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L G L I WKG G PL M+GPA V+ G I +
Sbjct: 241 HLTRGPLKIDWKGSGSPLIMSGPAKTVFHGRIRI 274
>ref|YP_047237.1| diaminopimelate epimerase [Acinetobacter sp. ADP1]
emb|CAG69415.1| diaminopimelate epimerase [Acinetobacter sp. ADP1]
Length = 281
Score = 309 bits (791), Expect = 1e-82
Identities = 154/275 (56%), Positives = 195/275 (70%), Gaps = 2/275 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDF+V+D ++Q + I+R+ADRH G+GFDQLL+VEPP P +DF Y
Sbjct: 3 LEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDFKY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNG RCFARFV + LT K I+V T G + + + VRVNMG
Sbjct: 63 RIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNMGY 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAA-EQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179
P F P +PF + E Y + A EQ++ VV+MGNPH V V DV TA V T+GP +
Sbjct: 123 PKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGPQV 182
Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239
ESH RFP+R N GFMQ+V +HIRLRV+ERG GET ACG+GACAA G+++GLLA EV
Sbjct: 183 ESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANEVE 242
Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
VEL GG+L IAW+ G ++MTGP +VY+G + L
Sbjct: 243 VELAGGKLQIAWQ-EGDVVWMTGPTANVYEGRLDL 276
>ref|YP_525713.1| Diaminopimelate epimerase [Saccharophagus degradans 2-40]
gb|ABD79501.1| Diaminopimelate epimerase [Saccharophagus degradans 2-40]
Length = 277
Score = 308 bits (789), Expect = 2e-82
Identities = 157/275 (57%), Positives = 189/275 (68%), Gaps = 1/275 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDF+++DA++Q V +PE R+LADRH GVG DQ+LVVE P P+ DF Y
Sbjct: 3 LRFTKMHGLGNDFVMIDAISQRVTITPERARQLADRHFGVGCDQVLVVETPDSPDADFKY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN DGSEV CGNGARCFA FVR +GLT K I V TA GRMVL V +DD V V+MG
Sbjct: 63 RIFNHDGSEVENCGNGARCFAVFVRQRGLTAKSVITVETAVGRMVLHVQEDDQVTVDMGA 122
Query: 121 PNFEPSAVPFRANKAEKTYIM-RAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179
P P+ +P A + +Y + I G VSMGNPH V V+D TA VETLGP +
Sbjct: 123 PILSPADIPLAAPQQATSYTLPTQGAGDITIGAVSMGNPHAVYCVNDCKTAPVETLGPEI 182
Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239
E+H FP++ N GFMQVV I LRVYERGAGET ACG+GACAAV G QGLL V+
Sbjct: 183 EAHPHFPKKVNAGFMQVVSPSEINLRVYERGAGETLACGTGACAAVVAGRLQGLLENTVK 242
Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
V LPGG L I W+G P+ MTGPA V+ G + +
Sbjct: 243 VNLPGGSLSITWEGVDSPVMMTGPATTVFHGQVKI 277
>ref|YP_746746.1| Diaminopimelate epimerase [Nitrosomonas eutropha C91]
gb|ABI58781.1| Diaminopimelate epimerase [Nitrosomonas eutropha C91]
Length = 278
Score = 306 bits (785), Expect = 6e-82
Identities = 154/277 (55%), Positives = 193/277 (69%), Gaps = 4/277 (1%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNV---FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57
+QF+KMHGLGNDF+V++A+ Q F P IRRLADRH G+GFDQLL+VE + D
Sbjct: 3 LQFTKMHGLGNDFIVINAINQPASLTFLDPATIRRLADRHFGIGFDQLLIVEQAREGG-D 61
Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117
F YRIFNADG EV QCGNGARCFARFVR LT+K IRV TA G + T+ ++ V VN
Sbjct: 62 FRYRIFNADGGEVEQCGNGARCFARFVRDYNLTDKNTIRVETARGIITPTIENNGEVSVN 121
Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177
MG P FEP+ +PF+A + Y ++ ++TI VS+GNPH V + D+D A V T GP
Sbjct: 122 MGVPQFEPAEIPFQAAQRMPVYPLQIGDKTIEISAVSIGNPHAVQIIPDIDLAPVTTEGP 181
Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237
+E+H FPER N GFMQ++ R HIRLRV+ERG GET ACG+GACAAV GI +GLL
Sbjct: 182 KIEAHPLFPERVNAGFMQIIDRAHIRLRVFERGTGETLACGTGACAAVVCGILRGLLDTT 241
Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
V+V + GG L I W G P++MTGPA+ V++G I L
Sbjct: 242 VQVAMHGGNLQIRWDGKDKPVWMTGPAITVFEGTIDL 278
>ref|YP_283421.1| Diaminopimelate epimerase [Dechloromonas aromatica RCB]
gb|AAZ44951.1| Diaminopimelate epimerase [Dechloromonas aromatica RCB]
Length = 276
Score = 306 bits (784), Expect = 8e-82
Identities = 157/274 (57%), Positives = 190/274 (69%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++FSKMHGLGNDF+V+D V Q+V SPE + LADRH GVG DQ+L+VE P +DF Y
Sbjct: 3 LKFSKMHGLGNDFVVLDGVRQSVSLSPEQLCYLADRHFGVGCDQILLVEKASQPGIDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV QCGNGARCF RFV +GLT+KR+IRV T G + + D V V+MG
Sbjct: 63 RIFNADGGEVEQCGNGARCFVRFVHDEGLTDKREIRVETMRGIISPRLEGDGNVTVDMGI 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F P+ +PF A +++ A++T+ VVSMGNPH V VD VDTA V GP++E
Sbjct: 123 PRFLPAEIPFLAEDDVIIHLLDVADETLETSVVSMGNPHAVQVVDSVDTAPVGEHGPLIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP R N GFMQ+V R I+LRVYERG+GET ACG+GACAAV GI++GLL VRV
Sbjct: 183 KHPRFPLRVNAGFMQIVDRHAIKLRVYERGSGETMACGTGACAAVVAGIRRGLLDSPVRV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
GG L IAW G P+ MTGPAV V+ G I L
Sbjct: 243 TTRGGDLTIAWGGDERPVLMTGPAVTVFTGEIEL 276
>ref|YP_159263.1| diaminopimelate epimerase [Azoarcus sp. EbN1]
emb|CAI08362.1| Diaminopimelate epimerase [Azoarcus sp. EbN1]
Length = 277
Score = 306 bits (783), Expect = 1e-81
Identities = 156/272 (57%), Positives = 188/272 (69%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDF+V+DA+ Q+V +PE +RRLADRH G+G DQLLVVE P++DF Y
Sbjct: 3 LRFTKMHGLGNDFVVIDAIRQSVDLTPEQVRRLADRHFGIGCDQLLVVEEATRPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV QCGNGARCF RFV +GLT KR IRV T +G + + DD LV V+MG
Sbjct: 63 RIFNADGGEVEQCGNGARCFVRFVHEQGLTAKRRIRVETRSGIIAPQLEDDGLVTVDMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EP+ VPF ++ + +T+ VSMGNPH V V DVD A V G ++E
Sbjct: 123 PVLEPARVPFVSDSDAIVQPLDVGGETVAITAVSMGNPHAVQVVADVDAAPVAAQGALIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H RFP R N GF+QVV IRLRV+ERGAGET ACG+GACAAV I + L VRV
Sbjct: 183 RHPRFPARVNAGFVQVVDAHRIRLRVFERGAGETLACGTGACAAVVTVILRELAQSPVRV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272
E GG LDIAW+GPG P+ MTGPAV V+ G I
Sbjct: 243 ETRGGELDIAWEGPGQPVLMTGPAVTVFAGEI 274
>ref|ZP_01128300.1| Diaminopimelate epimerase [Nitrococcus mobilis Nb-231]
gb|EAR20816.1| Diaminopimelate epimerase [Nitrococcus mobilis Nb-231]
Length = 277
Score = 305 bits (780), Expect = 2e-81
Identities = 143/274 (52%), Positives = 190/274 (69%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KM LGNDF+V+DA++Q V S + IR+L++R LG+G DQ+L+ E P P+ D Y
Sbjct: 4 LRFTKMQALGNDFIVIDAMSQTVALSSDQIRQLSNRRLGIGCDQVLLAERPQRPDTDIRY 63
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
R+FNADG EV CGNG RC ARF+ K L + ++RV T NG ++ + DD + VNMG
Sbjct: 64 RVFNADGGEVEHCGNGVRCLARFLHEKALLEQHELRVETRNGLTLVHLCDDGAIAVNMGP 123
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P EP +PFR K Y + ++ I+ G VSMGNPH V+QVDD+D+A ++T GP++
Sbjct: 124 PVLEPERIPFRPTKQASEYALALEDKRIMIGAVSMGNPHAVLQVDDIDSAPIDTFGPLIM 183
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H FP+R N+GFMQV+ R+ IRLRVYERGAGET ACG+GACAAV G +GLL V+V
Sbjct: 184 EHADFPQRVNVGFMQVISRDRIRLRVYERGAGETPACGTGACAAVVSGRLRGLLDARVKV 243
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
LPGG L I W G ++MTGPA+ VY+G I L
Sbjct: 244 NLPGGELMIYWDGGDTSVWMTGPALTVYEGEIRL 277
>ref|YP_342374.1| Diaminopimelate epimerase [Nitrosococcus oceani ATCC 19707]
gb|ABA56844.1| Diaminopimelate epimerase [Nitrosococcus oceani ATCC 19707]
Length = 276
Score = 303 bits (776), Expect = 6e-81
Identities = 147/272 (54%), Positives = 194/272 (71%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
F+KM GLGNDF+V+DA++Q + + +R +A+R LG+G DQ+L+V P P +DF YRI
Sbjct: 5 FTKMQGLGNDFVVIDALSQPLSLTASQVRWIANRRLGIGCDQVLLVTPASLPAIDFGYRI 64
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FNADG EV QCGNGARCFARFVR +GLT+K +RV TA+G + L + D + V+MG P
Sbjct: 65 FNADGGEVEQCGNGARCFARFVREQGLTDKNVLRVQTASGIIELQLETDGQITVDMGVPR 124
Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182
F P +PF+ ++ Y + Q + G VSMGNPHCV++V VDTA V GP+LESH
Sbjct: 125 FAPHQIPFKVDQEADYYSLELDGQQVEIGAVSMGNPHCVLRVPAVDTAPVAHWGPLLESH 184
Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242
RFP+R N+GF Q+V H+RLRVYERGAGET ACG+GACAA +G ++G L+ +V V+L
Sbjct: 185 PRFPQRVNVGFAQIVSPGHLRLRVYERGAGETPACGTGACAAAVIGKRRGWLSGQVNVDL 244
Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
PGGRL I W+G G ++M+GPA V+ G I L
Sbjct: 245 PGGRLGIHWEGDGKSVWMSGPAEIVFKGSIEL 276
>ref|NP_240392.2| diaminopimelate epimerase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
sp|P57649|DAPF_BUCAI Diaminopimelate epimerase (DAP epimerase)
Length = 284
Score = 300 bits (768), Expect = 5e-80
Identities = 139/274 (50%), Positives = 196/274 (71%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGL NDFMV++ + +NVF + +I++L++R+ G+GFDQLL+VE DFHY
Sbjct: 11 INFSKMHGLKNDFMVINCIKKNVFLTSHIIKKLSNRYTGIGFDQLLLVEKSNSLLTDFHY 70
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNA+G+EV QCGNGARCF F+ LKGLTNK+ I +ST + + +++++VNM E
Sbjct: 71 RIFNANGNEVEQCGNGARCFGLFLLLKGLTNKKKILISTKKKPLTIEFLTENMIKVNMNE 130
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P+F+ + N + + ++ + ++C +VS+GNPHC+I+V V A V +G +E
Sbjct: 131 PDFKFYNLSSLQNVLDNNFSIKLMNENLICNLVSIGNPHCIIKVQSVKNAPVNIIGDSIE 190
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+ FPE N+ FM+++ ++HI+LRVYER GET+ACGS ACAAVAVGI Q LL++ V V
Sbjct: 191 KNPIFPEGVNVSFMEILNKKHIKLRVYERNVGETKACGSAACAAVAVGIAQKLLSDTVHV 250
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
EL GG+L I WKG G PLYM GPA HVYDG+I++
Sbjct: 251 ELLGGKLIIIWKGFGTPLYMVGPAKHVYDGYIYI 284
>pir||F84998 diaminopimelate epimerase (EC 5.1.1.7) [imported] - Buchnera sp.
(strain APS)
dbj|BAB13278.1| diaminopimelate epimerase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 305
Score = 300 bits (768), Expect = 5e-80
Identities = 139/274 (50%), Positives = 196/274 (71%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ FSKMHGL NDFMV++ + +NVF + +I++L++R+ G+GFDQLL+VE DFHY
Sbjct: 32 INFSKMHGLKNDFMVINCIKKNVFLTSHIIKKLSNRYTGIGFDQLLLVEKSNSLLTDFHY 91
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNA+G+EV QCGNGARCF F+ LKGLTNK+ I +ST + + +++++VNM E
Sbjct: 92 RIFNANGNEVEQCGNGARCFGLFLLLKGLTNKKKILISTKKKPLTIEFLTENMIKVNMNE 151
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P+F+ + N + + ++ + ++C +VS+GNPHC+I+V V A V +G +E
Sbjct: 152 PDFKFYNLSSLQNVLDNNFSIKLMNENLICNLVSIGNPHCIIKVQSVKNAPVNIIGDSIE 211
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
+ FPE N+ FM+++ ++HI+LRVYER GET+ACGS ACAAVAVGI Q LL++ V V
Sbjct: 212 KNPIFPEGVNVSFMEILNKKHIKLRVYERNVGETKACGSAACAAVAVGIAQKLLSDTVHV 271
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
EL GG+L I WKG G PLYM GPA HVYDG+I++
Sbjct: 272 ELLGGKLIIIWKGFGTPLYMVGPAKHVYDGYIYI 305
>ref|YP_724747.1| diaminopimelate epimerase [Ralstonia eutropha H16]
emb|CAJ91379.1| diaminopimelate epimerase [Ralstonia eutropha H16]
Length = 288
Score = 300 bits (767), Expect = 7e-80
Identities = 156/281 (55%), Positives = 185/281 (65%), Gaps = 7/281 (2%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QF+KMHG GNDF+V+D + Q + +P R LA RH GVG DQ+L+VE P P++DF Y
Sbjct: 3 LQFTKMHGAGNDFVVLDGIHQQIDLTPAQWRALASRHFGVGADQILIVEKPSRPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RI NADGSEV CGNGARCF RFV KG+T+KR +RV NG + LT+ DD V V+MG
Sbjct: 63 RIVNADGSEVEHCGNGARCFVRFVTDKGMTDKRSVRVEVMNGVITLTLQDDGQVTVDMGA 122
Query: 121 PNFEPSAVPF-------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173
P EP+ VPF RA A+ Y + +T VVSMGNPH V VDDV+ V
Sbjct: 123 PELEPARVPFRAEGLPTRAEGADTLYGLEVNGRTEWISVVSMGNPHAVQVVDDVENFPVL 182
Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233
GPV+E H FP R N GFMQV R IRLRVYERGAGET ACG+GACAAV GI++GL
Sbjct: 183 QDGPVVEHHAAFPNRVNAGFMQVQDRHAIRLRVYERGAGETLACGTGACAAVVAGIRRGL 242
Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L VRV GG L IAW G P+ MTGPA V++G I L
Sbjct: 243 LDSPVRVHTHGGDLTIAWDGGAEPVRMTGPATTVFEGSIDL 283
>ref|ZP_01625795.1| Diaminopimelate epimerase [marine gamma proteobacterium HTCC2080]
gb|EAW41314.1| Diaminopimelate epimerase [marine gamma proteobacterium HTCC2080]
Length = 279
Score = 298 bits (764), Expect = 2e-79
Identities = 144/274 (52%), Positives = 191/274 (69%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHG GNDF+V+D V QN+ S IRRLA+R G+G DQ+L+V PP P+ DF Y
Sbjct: 3 VRFTKMHGAGNDFVVIDNVRQNLDLSASQIRRLANRQRGIGCDQVLIVGPPDSPDADFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
IFNADGSE QCGNGARCFARFVR + L+ K +RV NG M L +D + MG
Sbjct: 63 HIFNADGSEAGQCGNGARCFARFVREQRLSLKPKLRVQAPNGLMQLDTANDGRILAEMGI 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P F PSAVPF +K + Y + ++ ++ GV+SMGNPH VI V++V TA V +LG +E
Sbjct: 123 PIFTPSAVPFDTDKEQLEYTLTVSDTSLAMGVLSMGNPHAVIIVENVQTAPVASLGETIE 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
H +F +R N+GFMQ++ R+ I+LRV+ERGAGET ACG+GACAAV GI++ LL V V
Sbjct: 183 GHPKFTDRVNVGFMQILSRDEIKLRVFERGAGETLACGTGACAAVVHGIRKNLLNNAVTV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
LPGG+L I W+G G +++GP V++G I+L
Sbjct: 243 HLPGGKLSITWEGNGTAAWLSGPTASVFEGTINL 276
>ref|YP_390675.1| diaminopimelate epimerase [Thiomicrospira crunogena XCL-2]
gb|ABB41001.1| diaminopimelate epimerase [Thiomicrospira crunogena XCL-2]
Length = 283
Score = 298 bits (762), Expect = 3e-79
Identities = 151/273 (55%), Positives = 190/273 (69%), Gaps = 1/273 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++FSKM GLGNDFMV+D + + S E IR A+R+ GVGFDQLL+VE ++DF Y
Sbjct: 5 LKFSKMQGLGNDFMVIDGTQETITLSTEEIRFWANRYFGVGFDQLLMVENSAQGDVDFRY 64
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARCFA+FV KGLT+K +IRV TA+G +VL +TD VRVNMG
Sbjct: 65 RIFNADGSEVQQCGNGARCFAKFVYDKGLTDKTEIRVETASGMIVLYITDQGWVRVNMGA 124
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
PNF P A+PF + Y + + G VSMGNPH V++V D+ A V +G +E
Sbjct: 125 PNFLPEALPFDMPLESEQYELDVDGERFEIGAVSMGNPHAVLRVADLGAAPVAEVGEKIE 184
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
SH FPER N+GF + + R+HI+LRVYERGA ET ACG+GACAA+ V G + + V V
Sbjct: 185 SHRLFPERVNVGFAETLDRQHIKLRVYERGAAETLACGTGACAAMVVLRNLGEVDDVVTV 244
Query: 241 ELPGGRLDIAWKG-PGHPLYMTGPAVHVYDGFI 272
LPGG L+I W G P++MTGPAVHV++G I
Sbjct: 245 SLPGGDLEIEWNGDKSSPVWMTGPAVHVFEGEI 277
>ref|ZP_01077222.1| diaminopimelate epimerase [Marinomonas sp. MED121]
gb|EAQ64764.1| diaminopimelate epimerase [Marinomonas sp. MED121]
Length = 269
Score = 294 bits (753), Expect = 3e-78
Identities = 144/269 (53%), Positives = 185/269 (68%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHGLGNDF+VVDAV++ V+F+ ++I RL DRH G+GFDQLLVVEPP +P++DF YRIFN
Sbjct: 1 MHGLGNDFVVVDAVSRKVYFNKDMIARLGDRHTGIGFDQLLVVEPPTNPDMDFRYRIFNC 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DG+EV CGNGARCFA FV+ K L + I V T NG + L V + V V+MG P+FEP
Sbjct: 61 DGTEVEHCGNGARCFATFVQDKELISNDIINVETKNGPIQLRVLANGQVTVDMGVPSFEP 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
+ +PF Y + A ++ VS+GNPH V +VD++ VE +G +ESH+ F
Sbjct: 121 ADLPFTGTANGAFYDIPVAGESYPITPVSVGNPHAVHKVDELSDEYVERIGEAIESHDLF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245
P N+GFMQ+V I LRVYERG GETQACG+G CAAV GI+QG LA +V+ L GG
Sbjct: 181 PNNVNVGFMQLVSDSEINLRVYERGVGETQACGTGTCAAVVAGIKQGWLAAKVKANLLGG 240
Query: 246 RLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L I W+G G P+ MTGP V++G I+L
Sbjct: 241 ELTIEWQGEGQPILMTGPTAKVFEGQIYL 269
>ref|YP_740908.1| Diaminopimelate epimerase [Alkalilimnicola ehrlichei MLHE-1]
gb|ABI55418.1| Diaminopimelate epimerase [Alkalilimnicola ehrlichei MLHE-1]
Length = 279
Score = 294 bits (752), Expect = 4e-78
Identities = 150/276 (54%), Positives = 186/276 (67%), Gaps = 2/276 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KM GLGNDF+V+DAV Q V SPE IR +ADR GVG DQ+L+ P + DF Y
Sbjct: 3 VRFTKMQGLGNDFVVIDAVRQPVEPSPEQIRHIADRRYGVGCDQVLLATPARRSQADFGY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLT--NKRDIRVSTANGRMVLTVTDDDLVRVNM 118
IFN DGS+ CGNG RC ARF+ +GL + ++ + T NG + + DD V V+M
Sbjct: 63 LIFNPDGSQAEHCGNGVRCLARFLDDRGLVPAGRHELVIETINGLSRVRLCDDGPVTVDM 122
Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178
G P EP +PFRA + Y + Q + G VSMGNPH V++VDDVD+A VETLGP
Sbjct: 123 GAPVLEPPHIPFRAPSRAREYELEVEGQVVRLGAVSMGNPHAVLRVDDVDSAPVETLGPA 182
Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238
+ESH RFP R N+GFMQV+ HIRLRVYERGAGET ACG+GACAAV G +G L E V
Sbjct: 183 IESHSRFPRRVNVGFMQVLTPTHIRLRVYERGAGETLACGTGACAAVVSGRLRGWLEEAV 242
Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
V+LPGGRL I W G G ++MTGPA V++G I L
Sbjct: 243 DVDLPGGRLVIHWAGDGEHVWMTGPAETVFEGEIRL 278
>sp|Q8K901|DAPF_BUCAP Diaminopimelate epimerase (DAP epimerase)
gb|AAM68104.1| diaminopimelate epimerase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 284
Score = 291 bits (746), Expect = 2e-77
Identities = 135/272 (49%), Positives = 192/272 (70%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
FSKMHGLGNDFMV++++ Q+ + +I L++R+ GVGFDQLL++E + + DFHYRI
Sbjct: 13 FSKMHGLGNDFMVIESIKQDFILTKSIIENLSNRNTGVGFDQLLLIEKSNNFKFDFHYRI 72
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FNA+G+EV QCGNGARC F+ LKGL NKR I +ST + + D+ ++VNM EP+
Sbjct: 73 FNANGNEVEQCGNGARCVGLFLFLKGLINKRKIMLSTNKKNISIKFMSDNNIQVNMNEPS 132
Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182
F+ + + ++ + + C +VS+GNPHCVI+V+ ++ A V+ +G +LE +
Sbjct: 133 FKLEEISISKKIVLNNFSVKLINKNLKCSLVSIGNPHCVIKVESINNAPVKKIGELLEKN 192
Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242
FP+ N+GFM+V+ + HI+LRVYER GETQ+CGSGACAAVAVGI + LL + V+V+L
Sbjct: 193 SIFPQGINVGFMKVINKNHIQLRVYERDVGETQSCGSGACAAVAVGIAKNLLCDNVKVDL 252
Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
GG L I WKG +PLYM G A H+YDG+I++
Sbjct: 253 LGGNLIIKWKGFNYPLYMIGTACHIYDGYIYI 284
>ref|ZP_01103207.1| Diaminopimelate epimerase [gamma proteobacterium KT 71]
gb|EAQ97119.1| Diaminopimelate epimerase [Congregibacter litoralis KT71]
Length = 269
Score = 291 bits (744), Expect = 3e-77
Identities = 141/269 (52%), Positives = 184/269 (68%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHG GNDF+++D ++Q + P IRR+ADR GVG DQ+L+VEPP PE DF YRIFNA
Sbjct: 1 MHGAGNDFVMIDTISQRIKLRPRDIRRIADRRRGVGCDQVLLVEPPGQPEADFRYRIFNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DGSE QCGNGARCFARFVR + LT+ + V + M L + ++ V V+MG P F P
Sbjct: 61 DGSEAGQCGNGARCFARFVRHRRLTHLTTMVVEAGSSLMTLRLRENHEVEVDMGAPLFTP 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
+ +PFR + Y + AA +T+ GV+SMGNPH V++V+DV+ ++E LG + SHE F
Sbjct: 121 ADIPFRRAETAPEYELTAAGETLRVGVLSMGNPHAVLRVNDVNDGSLERLGEAIRSHEDF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245
PE N GF++VV R H+RLRV+ERG GET+ACGSGACAAV G + G L + V VEL GG
Sbjct: 181 PEETNAGFLEVVDRTHVRLRVFERGVGETEACGSGACAAVVYGRRMGWLDDRVTVELTGG 240
Query: 246 RLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+L I W+G + MTGP ++G I L
Sbjct: 241 KLHIQWQGDDSSVLMTGPTAISFEGTIRL 269
>ref|YP_556679.1| Diaminopimelate epimerase [Burkholderia xenovorans LB400]
gb|ABE28627.1| Diaminopimelate epimerase [Burkholderia xenovorans LB400]
Length = 287
Score = 288 bits (738), Expect = 2e-76
Identities = 152/283 (53%), Positives = 186/283 (65%), Gaps = 9/283 (3%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHG GNDF+V+D TQ V +P +R LADRH GVG DQLL+VE P +DF Y
Sbjct: 3 LKFTKMHGAGNDFVVLDGYTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVAGVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN DG EV CGNGARCF +FVR +GLT++R +RV G + LT+ ++ V V+MG
Sbjct: 63 RIFNCDGGEVEHCGNGARCFVKFVRERGLTDQRSVRVQVQKGTITLTMQENGEVLVDMGT 122
Query: 121 PNFEPSAVPF-------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173
P F+P VPF R A+ + + + T VVSMGNPH V V DV+ V
Sbjct: 123 PVFDPERVPFATKGLEGRREGADTLWPLDVSGTTRWISVVSMGNPHAVQVVGDVEAFPVL 182
Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233
GPV+E H RFP+R N GFMQ+V R IRLRVYERGAGET ACG+GACAAVA GI++GL
Sbjct: 183 AEGPVIERHARFPQRVNAGFMQIVGRNEIRLRVYERGAGETLACGTGACAAVAAGIRRGL 242
Query: 234 LAEEVRVELPGGRLDIAWKG--PGHPLYMTGPAVHVYDGFIHL 274
L VRV GG L I+W G PL M GPAV V++G I L
Sbjct: 243 LDSPVRVHTHGGDLTISWDSTREGEPLLMAGPAVTVFEGEIEL 285
>ref|YP_294424.1| diaminopimelate epimerase [Ralstonia eutropha JMP134]
gb|AAZ59580.1| Diaminopimelate epimerase [Ralstonia eutropha JMP134]
Length = 288
Score = 288 bits (738), Expect = 2e-76
Identities = 149/281 (53%), Positives = 183/281 (65%), Gaps = 7/281 (2%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QF+KMHG GNDF+V+D + Q + + E R LA RH GVG DQ+L+VE P ++DF Y
Sbjct: 3 LQFTKMHGAGNDFVVLDGIHQKLDLTTEQWRALASRHFGVGADQMLIVEKPTREDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV CGNGARCF RFV KG+T+KR +RV NG + LT+ DD V V+MG
Sbjct: 63 RIFNADGSEVEHCGNGARCFVRFVTDKGMTDKRSVRVEVMNGVITLTLQDDGQVTVDMGA 122
Query: 121 PNFEPSAVPF-------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173
P EP+ VPF R + Y + +T VSMGNPH V VDDV+ V
Sbjct: 123 PELEPARVPFRPDGLPVRTQGEDIAYGLEINGRTAWISPVSMGNPHAVQVVDDVENFPVL 182
Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233
GP++E H FP R N GF+QVV R RLRV+ERGAGET ACG+GACAAV GI++GL
Sbjct: 183 QDGPLIEHHATFPNRVNAGFLQVVDRHTARLRVFERGAGETLACGTGACAAVVAGIRRGL 242
Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L V+V GG L+IAW G P+ MTGPA V++G I L
Sbjct: 243 LDSPVKVHTHGGDLNIAWDGGAEPVRMTGPATTVFEGTIDL 283
>ref|NP_660893.2| diaminopimelate epimerase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 269
Score = 286 bits (731), Expect = 1e-75
Identities = 132/269 (49%), Positives = 189/269 (70%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHGLGNDFMV++++ Q+ + +I L++R+ GVGFDQLL++E + + DFHYRIFNA
Sbjct: 1 MHGLGNDFMVIESIKQDFILTKSIIENLSNRNTGVGFDQLLLIEKSNNFKFDFHYRIFNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
+G+EV QCGNGARC F+ LKGL NKR I +ST + + D+ ++VNM EP+F+
Sbjct: 61 NGNEVEQCGNGARCVGLFLFLKGLINKRKIMLSTNKKNISIKFMSDNNIQVNMNEPSFKL 120
Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185
+ + ++ + + C +VS+GNPHCVI+V+ ++ A V+ +G +LE + F
Sbjct: 121 EEISISKKIVLNNFSVKLINKNLKCSLVSIGNPHCVIKVESINNAPVKKIGELLEKNSIF 180
Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245
P+ N+GFM+V+ + HI+LRVYER GETQ+CGSGACAAVAVGI + LL + V+V+L GG
Sbjct: 181 PQGINVGFMKVINKNHIQLRVYERDVGETQSCGSGACAAVAVGIAKNLLCDNVKVDLLGG 240
Query: 246 RLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L I WKG +PLYM G A H+YDG+I++
Sbjct: 241 NLIIKWKGFNYPLYMIGTACHIYDGYIYI 269
>ref|NP_518258.1| diaminopimelate epimerase [Ralstonia solanacearum GMI1000]
sp|Q8Y344|DAPF_RALSO Diaminopimelate epimerase (DAP epimerase)
emb|CAD13665.1| diaminopimelate epimerase (dap epimerase) protein [Ralstonia
solanacearum]
Length = 292
Score = 286 bits (731), Expect = 1e-75
Identities = 146/281 (51%), Positives = 181/281 (64%), Gaps = 7/281 (2%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ F+KMHG GNDF+V+D + + F+PE R +ADRH GVG DQLL+VE P++DF Y
Sbjct: 3 LHFTKMHGAGNDFVVLDGIATPIDFTPEQWRAIADRHFGVGADQLLLVERSTRPDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN DG EV QCGNGARCF +FV +GLT+KR IRV NG LT+ D V V+MG
Sbjct: 63 RIFNHDGGEVEQCGNGARCFVKFVTDRGLTDKRTIRVEVMNGISTLTMQPDGQVTVDMGA 122
Query: 121 PNFE-------PSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173
P FE P A+P R + + ++ +T VSMGNPH V VDD + V
Sbjct: 123 PVFEAARLPFVPDALPTRVEGRDTQHALQINGRTAWLSTVSMGNPHAVQVVDDAEAFPVR 182
Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233
GP++ESH FP R N GFM++ R IRLRVYERGAGET ACG+GACAA GI++GL
Sbjct: 183 EDGPLIESHAVFPRRVNAGFMEIADRHAIRLRVYERGAGETLACGTGACAAAVAGIRRGL 242
Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L V+V GG L IAW G G P+ MTGPA V++G + L
Sbjct: 243 LDSPVKVTTHGGDLTIAWAGEGEPVMMTGPATTVFEGTLDL 283
>gb|EAX33603.1| diaminopimelate epimerase [Coxiella burnetii 'MSU Goat Q177']
Length = 304
Score = 285 bits (729), Expect = 2e-75
Identities = 143/270 (52%), Positives = 183/270 (67%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ F+KM G GNDF+V+DA + I+++A+R GVGFDQLLV+EPP + +DFH+
Sbjct: 31 VNFTKMQGSGNDFVVIDATKTPFQLTTSQIQKMANRRFGVGFDQLLVIEPPKNNSVDFHF 90
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARC ARF+R L+++ ++RVST N + L + D V V MG
Sbjct: 91 RIFNADGSEVGQCGNGARCIARFIRAHQLSDREELRVSTLNEVLELKIQPDGKVSVKMGV 150
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP+ +PF A+ Y + Q + GVV++GNPH +I V+ ++ V LG L
Sbjct: 151 PRFEPTEIPFIASGVANFYDIAVDNQIVKLGVVNIGNPHAIIPVERINAEEVGKLGARLS 210
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HE FPE AN+GFMQV+ ++IRLRVYERG GET ACGS ACAAVAVG + GLL E V V
Sbjct: 211 VHECFPEGANVGFMQVIDPQNIRLRVYERGTGETLACGSNACAAVAVGRRCGLLQERVVV 270
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
PGG L I W+GP P+ MTGPA V+ G
Sbjct: 271 SQPGGSLTIDWQGPLTPVTMTGPATTVFCG 300
>ref|NP_820945.1| diaminopimelate epimerase [Coxiella burnetii RSA 493]
ref|ZP_01299750.1| hypothetical protein CburD_01000121 [Coxiella burnetii Dugway
7E9-12]
ref|ZP_01310519.1| hypothetical protein CburR_01000343 [Coxiella burnetii RSA 331]
gb|AAO91459.1| diaminopimelate epimerase [Coxiella burnetii RSA 493]
Length = 276
Score = 285 bits (729), Expect = 2e-75
Identities = 143/270 (52%), Positives = 183/270 (67%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ F+KM G GNDF+V+DA + I+++A+R GVGFDQLLV+EPP + +DFH+
Sbjct: 3 VNFTKMQGSGNDFVVIDATKTPFQLTTSQIQKMANRRFGVGFDQLLVIEPPKNNSVDFHF 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADGSEV QCGNGARC ARF+R L+++ ++RVST N + L + D V V MG
Sbjct: 63 RIFNADGSEVGQCGNGARCIARFIRAHQLSDREELRVSTLNEVLELKIQPDGKVSVKMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180
P FEP+ +PF A+ Y + Q + GVV++GNPH +I V+ ++ V LG L
Sbjct: 123 PRFEPTEIPFIASGVANFYDIAVDNQIVKLGVVNIGNPHAIIPVERINAEEVGKLGARLS 182
Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240
HE FPE AN+GFMQV+ ++IRLRVYERG GET ACGS ACAAVAVG + GLL E V V
Sbjct: 183 VHECFPEGANVGFMQVIDPQNIRLRVYERGTGETLACGSNACAAVAVGRRCGLLQERVVV 242
Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
PGG L I W+GP P+ MTGPA V+ G
Sbjct: 243 SQPGGSLTIDWQGPLTPVTMTGPATTVFCG 272
>ref|ZP_00943025.1| Diaminopimelate epimerase [Ralstonia solanacearum UW551]
gb|EAP74485.1| Diaminopimelate epimerase [Ralstonia solanacearum UW551]
Length = 307
Score = 284 bits (726), Expect = 4e-75
Identities = 145/281 (51%), Positives = 183/281 (65%), Gaps = 7/281 (2%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ F+KMHG GNDF+V+D + + F+PE R +ADRH GVG DQLL+VE P++DF Y
Sbjct: 18 LHFTKMHGAGNDFVVLDGIETPIDFTPEQWRAIADRHFGVGADQLLLVERSTRPDVDFRY 77
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN DG EV CGNGARCF +FV +GLT+KR IRV +G LT+ D V V+MG
Sbjct: 78 RIFNHDGGEVEHCGNGARCFVKFVTDRGLTDKRTIRVEVMHGIATLTMQPDGQVTVDMGA 137
Query: 121 PNFEPSAVPF-------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173
P FE + +PF R + + ++ ++T VSMGNPH V VDD + V
Sbjct: 138 PVFEAARLPFVPDGLPTRVEGRDAQHALQVNDRTAWLSTVSMGNPHAVQVVDDTEAFPVL 197
Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233
GP++ESH FP R N GFM++V R IRLRVYERGAGET ACG+GACAAV GI++GL
Sbjct: 198 EDGPLIESHAVFPRRVNAGFMEIVDRHAIRLRVYERGAGETLACGTGACAAVVAGIRRGL 257
Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L V+V GG L IAW G G P+ MTGPA V++G + L
Sbjct: 258 LDSPVKVATHGGGLTIAWAGEGEPVMMTGPATTVFEGTLDL 298
>ref|ZP_01662002.1| Diaminopimelate epimerase [Ralstonia pickettii 12J]
gb|EAX44788.1| Diaminopimelate epimerase [Ralstonia pickettii 12J]
Length = 322
Score = 283 bits (725), Expect = 5e-75
Identities = 145/281 (51%), Positives = 182/281 (64%), Gaps = 7/281 (2%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+ F+KMHG GNDF+V+D + + F+PE +ADRH GVG DQLL+VE P++DF Y
Sbjct: 33 LHFTKMHGAGNDFVVLDGIQTPIDFTPEQWAAIADRHFGVGADQLLLVERSTRPDVDFRY 92
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN DG EV CGNGARCF +FV +GLT+KR +RV NG LT+ DD V V+MG
Sbjct: 93 RIFNHDGGEVEHCGNGARCFVKFVTDRGLTDKRTVRVEVMNGIATLTMQDDGQVTVDMGA 152
Query: 121 PNFEPSAVPF-------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173
P FE + +PF R + + ++ +T VSMGNPH V VDD + V
Sbjct: 153 PVFEAARLPFLPEGLPTRTQGDDTQHALQINGRTEWLSTVSMGNPHAVQIVDDTEAFPVL 212
Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233
GP++ESH FP R N GFMQ+V R +RLRVYERGAGET ACG+GACAAV GI++GL
Sbjct: 213 EDGPLIESHAVFPRRVNAGFMQIVDRHSVRLRVYERGAGETLACGTGACAAVVAGIRRGL 272
Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L V+V GG L IAW G G P+ MTGPA V++G + L
Sbjct: 273 LDSPVKVATHGGDLTIAWAGDGQPVMMTGPATTVFEGTLDL 313
>ref|YP_582308.1| diaminopimelate epimerase [Ralstonia metallidurans CH34]
gb|ABF07039.1| diaminopimelate epimerase [Ralstonia metallidurans CH34]
Length = 288
Score = 282 bits (722), Expect = 1e-74
Identities = 144/281 (51%), Positives = 183/281 (65%), Gaps = 7/281 (2%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
+QF+KMHG GNDF+V+D + Q + + R LA+RH G+G DQ+L+VE ++DF Y
Sbjct: 3 LQFTKMHGAGNDFIVLDGIHQKLDLTDAQWRALANRHFGIGADQILIVEKSSRDDVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RI NADG EV CGNGARCF RFV +G+T+K+ +RV NG + L + DD V V+MGE
Sbjct: 63 RIVNADGGEVEHCGNGARCFVRFVTDRGMTDKQSVRVEVMNGVITLKLQDDGQVTVDMGE 122
Query: 121 PNFEPSAVPF-------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173
P P+ VPF RA + Y + +T VSMGNPH V VDDV+ V
Sbjct: 123 PELTPARVPFIADGLPTRAEAQDTLYGLEVNGRTEWISPVSMGNPHAVQIVDDVEQFPVL 182
Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233
GPV+E H+ FP R N GFMQ+V R +RLRV+ERGAGET ACG+GACAAV GI++GL
Sbjct: 183 QDGPVIEHHKSFPNRVNAGFMQIVDRNTVRLRVFERGAGETLACGTGACAAVVAGIRRGL 242
Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
L V+V GG L IAW+G G P+ MTGPA V++G I L
Sbjct: 243 LDSPVKVHTHGGDLTIAWQGAGQPVQMTGPATTVFEGTIDL 283
>ref|ZP_01510899.1| diaminopimelate epimerase [Burkholderia phytofirmans PsJN]
gb|EAV04436.1| diaminopimelate epimerase [Burkholderia phytofirmans PsJN]
Length = 299
Score = 282 bits (721), Expect = 2e-74
Identities = 149/283 (52%), Positives = 182/283 (64%), Gaps = 9/283 (3%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHG GNDF+V+D TQ V +P +R LADRH GVG DQLL+VE P +DF Y
Sbjct: 3 LKFTKMHGAGNDFVVLDGYTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVAGVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN DG EV CGNGARCF +FVR GLT++R +RV G + LT+ ++ V V+MG
Sbjct: 63 RIFNCDGGEVEHCGNGARCFVKFVRDSGLTDQRSVRVQVQKGTITLTMQENGEVLVDMGT 122
Query: 121 PNFEPSAVPF-------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173
P F+P VPF R A+ + + T VVSMGNPH V VDDV+ V
Sbjct: 123 PVFDPERVPFATKGLQGRGEGADTLWPLDVNGTTRWISVVSMGNPHAVQVVDDVEAFPVL 182
Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233
GPV+E H RFP+R N GFMQ+V R I+LRVYERGAGET ACG+GACAAVA GI++GL
Sbjct: 183 VEGPVIERHARFPQRVNAGFMQIVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRRGL 242
Query: 234 LAEEVRVELPGGRLDIAWKG--PGHPLYMTGPAVHVYDGFIHL 274
L V V GG+L I W PL M GPA V++G I L
Sbjct: 243 LDAPVLVHTHGGKLTITWDAAQADQPLLMAGPAATVFEGEIEL 285
>ref|NP_273802.1| diaminopimelate epimerase [Neisseria meningitidis MC58]
sp|Q9K060|DAPF_NEIMB Diaminopimelate epimerase (DAP epimerase)
gb|AAF41173.1| diaminopimelate epimerase [Neisseria meningitidis MC58]
Length = 283
Score = 282 bits (721), Expect = 2e-74
Identities = 158/280 (56%), Positives = 191/280 (68%), Gaps = 15/280 (5%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE--LIRRLADRHLGVGFDQLLVVEPPYDPELDF 58
++F+KMHGLGNDFMV+DAV+Q+ F+PE I ADR GVGFDQLLVV +DF
Sbjct: 4 LKFTKMHGLGNDFMVIDAVSQD--FTPEDAPIAEWADRFRGVGFDQLLVVGRSETEGVDF 61
Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118
YRIFNADGSEV QCGNGARCFARFV KGLT+K++I V TANG + ++D+ +V VNM
Sbjct: 62 RYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVETANGVIFPKLSDNGMVTVNM 121
Query: 119 GEPNFEPSAVPFRANKAEKT------YIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172
G+P F PS +PF E + + Q + C V+MGNPH VI VDDV+ A V
Sbjct: 122 GKPKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSC--VNMGNPHAVIVVDDVECAPV 179
Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232
G ++E H +FPER N+GFMQVV R IRLRV+ERG GETQACG+GACAAV GI+ G
Sbjct: 180 RETGSLIEPHRQFPERVNVGFMQVVGRTAIRLRVFERGVGETQACGTGACAAVVAGIRLG 239
Query: 233 LLAE--EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
LL E V V LPGG L I W G + MTGPA V++G
Sbjct: 240 LLDEGKTVEVVLPGGTLYIEW-ACGGDVMMTGPAEAVFEG 278
>ref|NP_283751.1| diaminopimelate epimerase [Neisseria meningitidis Z2491]
sp|Q9JV69|DAPF_NEIMA Diaminopimelate epimerase (DAP epimerase)
emb|CAM08196.1| putative diaminopimelate epimerase [Neisseria meningitidis Z2491]
Length = 283
Score = 281 bits (720), Expect = 2e-74
Identities = 157/280 (56%), Positives = 191/280 (68%), Gaps = 15/280 (5%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE--LIRRLADRHLGVGFDQLLVVEPPYDPELDF 58
++F+KMHGLGNDFMV+DAV+Q+ F+PE I ADR GVGFDQLLVV +DF
Sbjct: 4 LKFTKMHGLGNDFMVIDAVSQD--FTPEDAPIAAWADRFRGVGFDQLLVVGRSETEGVDF 61
Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118
YRIFNADGSEV QCGNGARCFARFV KGLT+K++I V TANG + ++D+ +V VNM
Sbjct: 62 RYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVETANGVIFPKLSDNGMVTVNM 121
Query: 119 GEPNFEPSAVPFRANKAEKT------YIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172
G+P F PS +PF E + + Q + C V+MGNPH VI VDDV+ A V
Sbjct: 122 GKPRFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSC--VNMGNPHAVIVVDDVECAQV 179
Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232
G ++E H +FPER N+GFMQ+V R IRLRV+ERG GETQACG+GACAAV GI+ G
Sbjct: 180 RETGSLIEPHRQFPERVNVGFMQIVSRTAIRLRVFERGVGETQACGTGACAAVVAGIRLG 239
Query: 233 LLAE--EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
LL E V V LPGG L I W G + MTGPA V++G
Sbjct: 240 LLDEGKTVEVILPGGTLYIEW-ACGGDVMMTGPAETVFEG 278
>ref|YP_974802.1| putative diaminopimelate epimerase [Neisseria meningitidis FAM18]
emb|CAM10004.1| putative diaminopimelate epimerase [Neisseria meningitidis FAM18]
Length = 283
Score = 281 bits (718), Expect = 3e-74
Identities = 157/280 (56%), Positives = 191/280 (68%), Gaps = 15/280 (5%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE--LIRRLADRHLGVGFDQLLVVEPPYDPELDF 58
++F+KMHGLGNDFMV+DAV+Q+ F+PE I ADR GVGFDQLLVV +DF
Sbjct: 4 LKFTKMHGLGNDFMVIDAVSQD--FTPEDAPIAAWADRFRGVGFDQLLVVGRSETEGVDF 61
Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118
YRIFNADGSEV QCGNGARCFARFV KGLT+K++I V TANG + ++D+ +V VNM
Sbjct: 62 RYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVETANGVIFPKLSDNGMVTVNM 121
Query: 119 GEPNFEPSAVPFRANKAEKT------YIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172
G+P F PS +PF E + + Q + C V+MGNPH VI VDDV+ A V
Sbjct: 122 GKPRFMPSEIPFVPELGEGDDACIYGVHLESGIQPVSC--VNMGNPHAVIVVDDVECAPV 179
Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232
G ++E H +FPER N+GFMQ+V R IRLRV+ERG GETQACG+GACAAV GI+ G
Sbjct: 180 RETGSLIEPHRQFPERVNVGFMQIVSRTAIRLRVFERGVGETQACGTGACAAVVAGIRLG 239
Query: 233 LLAE--EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
LL E V V LPGG L I W G + MTGPA V++G
Sbjct: 240 LLDEGKTVEVILPGGTLYIEW-ACGGDVMMTGPAEAVFEG 278
>ref|ZP_01499784.1| diaminopimelate epimerase [Burkholderia phymatum STM815]
gb|EAV00692.1| diaminopimelate epimerase [Burkholderia phymatum STM815]
Length = 286
Score = 280 bits (716), Expect = 6e-74
Identities = 149/282 (52%), Positives = 182/282 (64%), Gaps = 8/282 (2%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHG GNDF+V+D TQ + + +R LA+RH GVG DQLLVVE P +DF Y
Sbjct: 3 LKFTKMHGAGNDFVVLDGYTQPLNLTETQVRALANRHFGVGADQLLVVEKPTVDGVDFRY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFN DG EV CGNGARCF +FVR LT+KR +RV G + LT+ D+ V V+MG
Sbjct: 63 RIFNCDGGEVEHCGNGARCFVKFVRDSRLTDKRSVRVQVQKGVITLTMQDNGEVVVDMGA 122
Query: 121 PNFEPSAVPFRANKAE-------KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173
P FEP VPF A+ E Y + +T VVSMGNPH V VDDV+ V
Sbjct: 123 PVFEPVQVPFDASGVEARREGNDTLYALEVNGETRWVSVVSMGNPHAVQVVDDVEAFPVL 182
Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233
GPV+E+H RFP+R N GFMQ+V R ++LRVYERGAGET ACG+GACAAVA GI++GL
Sbjct: 183 VDGPVIETHPRFPQRVNAGFMQIVGRSEVKLRVYERGAGETLACGTGACAAVAAGIRRGL 242
Query: 234 LAEEVRVELPGGRLDIAWKG-PGHPLYMTGPAVHVYDGFIHL 274
L V+V GG L I W G L M GPA V++G I L
Sbjct: 243 LDAPVKVHTHGGTLTITWNGESASSLMMAGPAATVFEGEIEL 284
>gb|EAF02891.1| unknown [environmental sequence]
Length = 203
Score = 280 bits (715), Expect = 8e-74
Identities = 129/203 (63%), Positives = 158/203 (77%)
Query: 72 QCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFR 131
QCGNGARCFARFVR+KGLTNK I VST +G + L + D V VNMG PNFEPS +P +
Sbjct: 1 QCGNGARCFARFVRMKGLTNKHKISVSTKSGNLTLYIEKDGQVTVNMGHPNFEPSKIPLK 60
Query: 132 ANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANI 191
A+K E TYI+RA E T+ G VSMGNPHCV++VDD+ TA V+ LGP+LE+HERFP+RANI
Sbjct: 61 ASKRELTYIIRAEEHTVFSGAVSMGNPHCVLEVDDITTAQVDVLGPLLENHERFPQRANI 120
Query: 192 GFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAW 251
GFMQV+ +EHI+LRV+ERG ET ACG+GACAA+ +G Q L+ V+V+LPGG L I W
Sbjct: 121 GFMQVISQEHIKLRVWERGVNETLACGTGACAAMVIGHMQSKLSSAVQVDLPGGTLQIRW 180
Query: 252 KGPGHPLYMTGPAVHVYDGFIHL 274
G GHP+ MTGPA HV+DG + L
Sbjct: 181 SGEGHPVRMTGPAEHVFDGQVAL 203
>ref|YP_207495.1| DapF [Neisseria gonorrhoeae FA 1090]
gb|AAW89083.1| putative diaminopimelate epimerase [Neisseria gonorrhoeae FA 1090]
Length = 283
Score = 277 bits (709), Expect = 4e-73
Identities = 157/280 (56%), Positives = 189/280 (67%), Gaps = 15/280 (5%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE--LIRRLADRHLGVGFDQLLVVEPPYDPELDF 58
++F+KMHGLGNDFMV+DAV+Q+ F+PE I ADR GVGFDQLLVV +DF
Sbjct: 4 LKFTKMHGLGNDFMVIDAVSQD--FTPEDVPIAAWADRFRGVGFDQLLVVGCSETEGVDF 61
Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118
YRIFNADGSEV QCGNGARCFARFV KGLT+K++I V TA G + ++D+ +V VNM
Sbjct: 62 RYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVETAKGIIFPKLSDNGMVTVNM 121
Query: 119 GEPNFEPSAVPFRANKAEKT------YIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172
G+P F PS +PF E + + Q + C V+MGNPH VI VDDV+ A V
Sbjct: 122 GKPKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSC--VNMGNPHAVIVVDDVECAPV 179
Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232
G +E H +FPER N+GFMQVV R IRLRV+ERG GETQACG+GACAAV GI+ G
Sbjct: 180 RETGSRIEPHRQFPERVNVGFMQVVGRTAIRLRVFERGVGETQACGTGACAAVVAGIRLG 239
Query: 233 LLAE--EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
LL E V V LPGG L I W G + MTGPA V++G
Sbjct: 240 LLDEGKTVEVVLPGGTLYIEW-ACGGDVMMTGPAETVFEG 278
>ref|NP_778130.1| diaminopimelate epimerase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
sp|P59582|DAPF_BUCBP Diaminopimelate epimerase (DAP epimerase)
gb|AAO27235.1| diaminopimelate epimerase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 286
Score = 276 bits (705), Expect = 1e-72
Identities = 142/276 (51%), Positives = 195/276 (70%), Gaps = 3/276 (1%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59
++FSKMHGLGNDF++++A+ Q F + +I+ L++R+ G+GFDQLL+VE + +DFH
Sbjct: 12 IKFSKMHGLGNDFIIINAMMQKTFPVTSNIIQNLSNRYTGIGFDQLLLVENSKNVNIDFH 71
Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119
YRIFNA+G+EV+QCGNGARCFA FV LK LT KR + VST ++L V ++ V V+MG
Sbjct: 72 YRIFNANGTEVSQCGNGARCFALFVLLKKLTKKRTLYVSTNTTTLILNVLNNGNVCVDMG 131
Query: 120 EPNFEPSAVPFRANKAEKT-YIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178
P F+ + F N E + + ++ + I +VS+GNPHC+I V+++ V+ +G
Sbjct: 132 VPCFKLKNI-FGENIIENSLHSIKFVNKIINYDLVSIGNPHCIIYVNNLKKYPVKKIGFY 190
Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238
L +H+ FPE N+ F++V+ + I LRVYERG GET ACGSGACA+VA+GIQQGLL EV
Sbjct: 191 LSTHKIFPEGINVNFVEVLSKNEIALRVYERGVGETLACGSGACASVALGIQQGLLFNEV 250
Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+V L G L I WKG LYMTGPAVHVYDG+ +L
Sbjct: 251 QVNLLNGILKINWKGGSEKLYMTGPAVHVYDGYFYL 286
>ref|YP_524684.1| Diaminopimelate epimerase [Rhodoferax ferrireducens T118]
gb|ABD71153.1| Diaminopimelate epimerase [Rhodoferax ferrireducens DSM 15236]
Length = 291
Score = 275 bits (704), Expect = 1e-72
Identities = 150/283 (53%), Positives = 177/283 (62%), Gaps = 11/283 (3%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
F+KM G GNDF+V+D S R LADRH GVG DQ+L V P P +DF Y I
Sbjct: 5 FTKMQGAGNDFVVLDETQGRFGLSTAHYRLLADRHFGVGADQILTVRPSPAPGIDFEYLI 64
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
NADG+EV QCGNGARCFARFVR +GLT K IRV T G + + D V VNMG P
Sbjct: 65 HNADGAEVEQCGNGARCFARFVRDQGLTAKDAIRVQTRGGVIEPQLNPDGRVTVNMGAPV 124
Query: 123 FEPSAVPFRANKAE-------KTYIMRAAEQ----TILCGVVSMGNPHCVIQVDDVDTAA 171
FE + +PF A + K + + + T+ VVSMGNPH V VDDVDTA
Sbjct: 125 FELAEIPFDATGLQPQTSGLWKKWPLALVDSGHATTVYVAVVSMGNPHAVQVVDDVDTAP 184
Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231
V GP++E H FP+R N GFMQ+V R HIRLRVYERG GET ACGSGACAAV GI+
Sbjct: 185 VRLQGPLIEHHASFPKRVNAGFMQIVDRSHIRLRVYERGTGETLACGSGACAAVVAGIRL 244
Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
GLL + V V+ GG L I+W G P+ MTGPA V+ G I+L
Sbjct: 245 GLLDDTVHVQTHGGTLTISWAGAAAPVLMTGPATPVFHGEINL 287
>emb|CAJ47761.1| diaminopimelate epimerase [Bordetella avium 197N]
Length = 298
Score = 275 bits (703), Expect = 2e-72
Identities = 144/279 (51%), Positives = 178/279 (63%), Gaps = 9/279 (3%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
F+KMHG GNDF+V+D V Q + +PE R L DRH GVG DQ+L+VEP P+ DF YRI
Sbjct: 11 FTKMHGAGNDFVVLDGVRQTIDMTPERARALGDRHFGVGADQILLVEPATRPDADFRYRI 70
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FN DGSEV CGNGARCF RFV +GL++K +R +G +VL DD+ V V MG
Sbjct: 71 FNNDGSEVEHCGNGARCFVRFVHEQGLSSKNPLRAEIVSGLIVLDEGDDEQVTVEMGTTR 130
Query: 123 FEPSAVPF-------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175
F+P+A+PF R + Y++ I V++ NPH V V DVD A V +
Sbjct: 131 FDPAALPFDVSGLAQRQQGQDTLYVLPLPGGEIELSAVAISNPHAVQVVADVDQAPVSEV 190
Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235
G +ESH RF R N GFMQ+ R +IRLRVYERGAGET ACG+GACAAVA GI++GLL
Sbjct: 191 GAHIESHPRFARRVNAGFMQIQDRHNIRLRVYERGAGETLACGTGACAAVAAGIRRGLLD 250
Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
VRV+ GG L IAW G L MTGPA V+ G + +
Sbjct: 251 SPVRVQTRGGALTIAWN--GEQLRMTGPAESVFSGQVDI 287
>ref|NP_882550.1| diaminopimelate epimerase [Bordetella parapertussis 12822]
emb|CAE39930.1| diaminopimelate epimerase [Bordetella parapertussis]
Length = 303
Score = 273 bits (699), Expect = 5e-72
Identities = 140/284 (49%), Positives = 182/284 (64%), Gaps = 14/284 (4%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
F+KMHG GNDF+V+D V Q++ +PE R LADRH G+G DQ+L+VEP + DF YRI
Sbjct: 11 FTKMHGAGNDFVVLDGVRQDIAMTPERARALADRHFGIGADQILLVEPATQADADFRYRI 70
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FNADGSEV CGNGARCF RFV +GL+ + +R G +VL +D+ V V+MG
Sbjct: 71 FNADGSEVEHCGNGARCFVRFVHEQGLSARNPLRAEIVTGVIVLDEGEDEQVTVDMGSTR 130
Query: 123 FEPSAVPFRA------NKAEKTY------IMRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170
F+P ++PF + + + T +++ V++ NPH V VDDVD A
Sbjct: 131 FDPPSLPFDSTGLSAQTQGQDTVWNLEIDAPAGLPRSVAISTVAISNPHAVQVVDDVDAA 190
Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230
V +GP++ESH RF R N+GFMQVV R IRLRVYERGAGET ACG+GACAAVA G++
Sbjct: 191 PVGVIGPLVESHPRFARRVNVGFMQVVDRHQIRLRVYERGAGETLACGTGACAAVAAGVR 250
Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+GLL VRV GG L + W G L MTGPA+ V+ G + +
Sbjct: 251 RGLLDSPVRVHTRGGMLTVDWN--GERLRMTGPAISVFSGQVDI 292
>ref|NP_881645.1| diaminopimelate epimerase [Bordetella pertussis Tohama I]
ref|NP_886742.1| diaminopimelate epimerase [Bordetella bronchiseptica RB50]
emb|CAE43343.1| diaminopimelate epimerase [Bordetella pertussis Tohama I]
emb|CAE30691.1| diaminopimelate epimerase [Bordetella bronchiseptica RB50]
Length = 303
Score = 273 bits (697), Expect = 9e-72
Identities = 140/284 (49%), Positives = 182/284 (64%), Gaps = 14/284 (4%)
Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62
F+KMHG GNDF+V+D V Q++ +PE R LADRH G+G DQ+L+VEP + DF YRI
Sbjct: 11 FTKMHGAGNDFVVLDGVRQDIAMTPERARALADRHFGIGADQILLVEPATRADADFRYRI 70
Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122
FNADGSEV CGNGARCF RFV +GL+ + +R G +VL +D+ V V+MG
Sbjct: 71 FNADGSEVEHCGNGARCFVRFVHEQGLSARNPLRAEIVTGVIVLDEGEDEQVTVDMGSTR 130
Query: 123 FEPSAVPFRA------NKAEKTY------IMRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170
F+P ++PF + + + T +++ V++ NPH V VDDVD A
Sbjct: 131 FDPPSLPFDSTGLSAQTQGQDTVWNLEIDAPAGLPRSVAISTVAISNPHAVQVVDDVDAA 190
Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230
V +GP++ESH RF R N+GFMQVV R IRLRVYERGAGET ACG+GACAAVA G++
Sbjct: 191 PVGVIGPLVESHPRFARRVNVGFMQVVDRHQIRLRVYERGAGETLACGTGACAAVAAGVR 250
Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
+GLL VRV GG L + W G L MTGPA+ V+ G + +
Sbjct: 251 RGLLDSPVRVHTRGGMLTVDWN--GERLRMTGPAISVFSGQVDI 292
>ref|YP_987875.1| Diaminopimelate epimerase [Acidovorax sp. JS42]
gb|ABM43799.1| Diaminopimelate epimerase [Acidovorax sp. JS42]
Length = 315
Score = 271 bits (694), Expect = 2e-71
Identities = 147/286 (51%), Positives = 181/286 (63%), Gaps = 12/286 (4%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KM G GNDF+V+D + +P R LADRH GVG DQ+L+V P +DF Y
Sbjct: 26 IRFTKMQGAGNDFVVLDETQGRLGLTPAQYRFLADRHFGVGADQILIVRPSPGAGIDFEY 85
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
I NADG +V QCGNGARCFAR+VR KGLT + IRV T G + +T D V V+MG
Sbjct: 86 VIHNADGGQVEQCGNGARCFARYVRDKGLTAQDTIRVQTMAGVIAPHLTADGRVTVDMGR 145
Query: 121 PNFEPSAVPF-----------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDT 169
P EP+ VPF K +A+ TIL VVSMGNPH V VDDVDT
Sbjct: 146 PELEPARVPFDTTGLAPVSQGSGQKWPLALDGQASAATILIAVVSMGNPHAVQLVDDVDT 205
Query: 170 AAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI 229
A V GP++ESH RFP+R N G++Q+V R +RLRVYERGAGET ACG+GACAAV GI
Sbjct: 206 APVAQTGPLIESHPRFPQRVNAGYLQIVNRGEVRLRVYERGAGETLACGTGACAAVVAGI 265
Query: 230 QQGLLAEEVRVELPGGRLDIAWKGP-GHPLYMTGPAVHVYDGFIHL 274
+ GLL V+V GG L I W G P++MTGPA V++G I +
Sbjct: 266 RLGLLDARVQVHTRGGLLTIDWAGGLQDPVFMTGPATTVFEGEIDI 311
>gb|AAT42404.1| diaminopimelate epimerase [Collimonas fungivorans]
Length = 280
Score = 271 bits (693), Expect = 3e-71
Identities = 143/276 (51%), Positives = 179/276 (64%), Gaps = 7/276 (2%)
Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65
MHG GNDF+V+DA+ Q+V F+P +RL DR GVG DQ+LVVE +DF YRI+NA
Sbjct: 1 MHGAGNDFVVIDAIHQHVDFTPAQWQRLGDRRFGVGADQMLVVEKSQAEGVDFRYRIYNA 60
Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125
DG EV QCGNGAR F +FV KGLT+KR IRV T +G + + DD + V MG P P
Sbjct: 61 DGGEVEQCGNGARAFVKFVTDKGLTSKRAIRVETMSGIIEPKLEDDGRITVAMGAPVLAP 120
Query: 126 SAVPF-------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178
+AVPF RA + + + + + VVSMGNPH V V+D + A V GP+
Sbjct: 121 AAVPFDASNLDSRAMGEDTLWPLDVQGKQVWISVVSMGNPHAVQVVEDSEAAPVLAEGPL 180
Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238
+E H RFP R N GFMQ+V R I+LRV+ERGAGET ACG+GACAAV GI++GLL V
Sbjct: 181 IEHHPRFPRRVNAGFMQIVDRHSIKLRVFERGAGETLACGTGACAAVVAGIRRGLLDSPV 240
Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
V+ GG L IAW G + MTGPAV V++G I +
Sbjct: 241 AVQTHGGELSIAWAGGQQAVMMTGPAVSVFEGEIEI 276
>ref|YP_001002777.1| Diaminopimelate epimerase [Halorhodospira halophila SL1]
gb|ABM61975.1| Diaminopimelate epimerase [Halorhodospira halophila SL1]
Length = 287
Score = 270 bits (690), Expect = 6e-71
Identities = 143/276 (51%), Positives = 177/276 (64%), Gaps = 4/276 (1%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
M+F+KM LGNDF+V+D + Q + +PE IR LADR GVG DQLL+ EPP D Y
Sbjct: 1 MRFTKMEALGNDFVVLDGIRQRLHLTPETIRTLADRRRGVGCDQLLIAEPPAHIAADVRY 60
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG+EV CGNG RC ARF+ +GL +R+ T DD V V+MG
Sbjct: 61 RIFNADGTEVEHCGNGVRCLARFLVDEGLAAPGVLRIETDGRITEAEPRDDGQVSVDMGP 120
Query: 121 PNFEPSAVPFRANKAEKTYIMRAA--EQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178
P EP+ +PF+A ++ Y + + EQTI G VSMGNPH V++VDD+ A V LGP
Sbjct: 121 PELEPARIPFQAPVRQEAYRLATSRGEQTI--GAVSMGNPHAVLRVDDMTGAPVAELGPE 178
Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238
+E H RFP R N+GFM+V R+ IRLRV+ERG GET ACG+GACAAV G + L V
Sbjct: 179 IERHPRFPRRVNVGFMEVCTRDRIRLRVFERGVGETPACGTGACAAVVAGRLRDWLDAPV 238
Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
VEL GG L I W GPG ++MTGPA V+ G I L
Sbjct: 239 TVELTGGVLVIHWLGPGRSVWMTGPARTVFRGEIEL 274
>ref|YP_969171.1| Diaminopimelate epimerase [Acidovorax avenae subsp. citrulli
AAC00-1]
gb|ABM31397.1| Diaminopimelate epimerase [Acidovorax avenae subsp. citrulli
AAC00-1]
Length = 292
Score = 269 bits (687), Expect = 1e-70
Identities = 146/286 (51%), Positives = 181/286 (63%), Gaps = 12/286 (4%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KM G GNDF+V+D + +P R LADRH GVG DQ+L V P +DF Y
Sbjct: 3 IRFTKMQGAGNDFVVLDETQGRLGLTPAQYRYLADRHFGVGADQILTVRPSPAEGIDFEY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
I NADG EV QCGNGARCFAR+VR KGLT++ IRV T G + +T D V V+MG
Sbjct: 63 VIHNADGGEVEQCGNGARCFARYVRDKGLTDRDTIRVQTLAGVIAPRLTPDGRVTVDMGR 122
Query: 121 PNFEPSAVPF-------RANKAEKTYIMR----AAEQTILCGVVSMGNPHCVIQVDDVDT 169
P F+P+ VPF A A +T+ + A Q + VVSMGNPH V V DVD
Sbjct: 123 PRFDPAEVPFDASGLAPAARGAGQTWPLALGAGADAQVVDVAVVSMGNPHAVQLVGDVDA 182
Query: 170 AAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI 229
A V GP++E H RFP+R N G++Q+ R +RLRVYERGAGET ACG+GACAAVA GI
Sbjct: 183 APVAHTGPLIEGHARFPQRVNAGYLQIEDRARVRLRVYERGAGETLACGTGACAAVAAGI 242
Query: 230 QQGLLAEEVRVELPGGRLDIAWKG-PGHPLYMTGPAVHVYDGFIHL 274
+ GLL V V GG L IAW G P ++MTGPA V++G I +
Sbjct: 243 RLGLLDARVDVRTRGGLLTIAWSGDPSESVFMTGPATTVFEGQIDI 288
>ref|YP_125773.1| Diaminopimelate epimerase [Legionella pneumophila str. Lens]
emb|CAH14637.1| Diaminopimelate epimerase [Legionella pneumophila str. Lens]
Length = 277
Score = 269 bits (687), Expect = 1e-70
Identities = 132/271 (48%), Positives = 179/271 (66%), Gaps = 1/271 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDF+V+D V Q++ + E I++LA+RH G+GFDQ L++E +DF+Y
Sbjct: 3 IKFTKMHGLGNDFIVLDGVNQSIQLTVEQIQKLANRHTGIGFDQCLLIESSQTEGIDFNY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV QCGNGARC A F R GLT K + V+T M L + +D+ V VNMG
Sbjct: 63 RIFNADGQEVGQCGNGARCIALFARYYGLTAKNKLTVATKTTLMDLIINEDNSVSVNMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAE-QTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179
P P +P A++ Y ++ T+ +S+GNPH V+ V+++DTA V +LG +
Sbjct: 123 PRLAPGEIPLLADRQSPEYSLKLNNGNTVNLHAISVGNPHAVLLVENIDTAPVNSLGQQI 182
Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239
H +FPE+ N+GFMQ+V E I LRVYERG GET ACGSGA AA A+ L++++
Sbjct: 183 SFHPQFPEQVNVGFMQIVNHEKINLRVYERGCGETIACGSGAVAAAAIARLFYNLSDKIT 242
Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
V LPGG L I W P P+ +TGPA VY+G
Sbjct: 243 VHLPGGDLCIQWPCPTAPIILTGPAAFVYEG 273
>ref|YP_094410.1| diaminopimelate epimerase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gb|AAU26463.1| diaminopimelate epimerase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 277
Score = 268 bits (684), Expect = 3e-70
Identities = 131/271 (48%), Positives = 178/271 (65%), Gaps = 1/271 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDF+V+D V Q++ + E I++LA+RH G+GFDQ L++E +DF+Y
Sbjct: 3 IKFTKMHGLGNDFIVLDGVNQSIQLTVEQIQKLANRHTGIGFDQCLLIESSQTEGIDFNY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV QCGNGARC A F R GLT K + V+T M L + +D+ V VNMG
Sbjct: 63 RIFNADGQEVGQCGNGARCIALFARYYGLTAKNKLTVATKTTLMDLIINEDNSVSVNMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAE-QTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179
P P +P A++ Y + T+ +S+GNPH V+ V+++DTA V +LG +
Sbjct: 123 PRLAPGEIPLLADRQSPEYSLELNNGNTVNLHAISVGNPHAVLLVENIDTAPVNSLGQQI 182
Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239
H +FPE+ N+GFMQ++ E I LRVYERG GET ACGSGA AA A+ L++++
Sbjct: 183 SFHPQFPEQVNVGFMQIINHEKINLRVYERGCGETIACGSGAVAAAAIARLFYNLSDKIT 242
Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270
V LPGG L I W P P+ +TGPA VY+G
Sbjct: 243 VHLPGGDLCIQWPCPTAPIILTGPAAFVYEG 273
>ref|YP_122771.1| Diaminopimelate epimerase [Legionella pneumophila str. Paris]
emb|CAH11579.1| Diaminopimelate epimerase [Legionella pneumophila str. Paris]
Length = 277
Score = 266 bits (681), Expect = 7e-70
Identities = 131/271 (48%), Positives = 178/271 (65%), Gaps = 1/271 (0%)
Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
++F+KMHGLGNDF+V+D V Q++ + + I++LA+RH G+GFDQ L++E +DF+Y
Sbjct: 3 IKFTKMHGLGNDFIVLDGVNQSIQLTVKQIQKLANRHTGIGFDQCLLIESSQTEGIDFNY 62
Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
RIFNADG EV QCGNGARC A F R GLT K + V+T M L + +D+ V VNMG
Sbjct: 63 RIFNADGQEVGQCGNGARCIALFARYYGLTAKNKLTVATKTTLMDLIINEDNSVSVNMGV 122
Query: 121 PNFEPSAVPFRANKAEKTYIMRAAE-QTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179
P P +P A++ Y + T+ +S+GNPH V+ V+++DTA V +LG +
Sbjct: 123 PRLAPGEIPLLADRQSPEYSLELNNGNTVNLHAISIGNPHAVLLVENIDTAPVNSLGQQI 182
Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239
H +FPE+ N+GFMQ+V E I LRVYERG GET ACGSGA AA A+ L++++
Sbjct: 183 SFHPQFPEQVNVGFMQIVNHEKINLRVYERGCGETIACGSGAVAAAAIARLFYNLSDKIT 242
Query: 240 VELPGGRLDIAWKGPGHPLYMTG
