Blast performed on June-30-2009
BLASTP 2.2.13 [Nov-27-2005]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: uniref100 
           8,325,145 sequences; 2,946,459,760 total letters

Query= EG12243 gadX 
         (274 letters)

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef100_P37639 HTH-type transcriptional regulator gadX n=6 Tax...   544   e-153 
UniRef100_C1NFE8 Transcriptional regulator GadX n=1 Tax=Escheric...   542   e-152 
UniRef100_A7ZT57 Transcriptional regulator GadX n=11 Tax=Enterob...   536   e-151 
UniRef100_Q83PR0 HTH-type transcriptional regulator gadX n=1 Tax...   535   e-150 
UniRef100_Q0SY72 Putative ARAC-type regulatory protein n=1 Tax=S...   533   e-150 
UniRef100_P58230 HTH-type transcriptional regulator gadX n=12 Ta...   533   e-150 
UniRef100_B3WVH6 Transcriptional regulator GadX n=1 Tax=Shigella...   531   e-149 
UniRef100_Q32AZ5 Putative ARAC-type regulatory protein n=1 Tax=S...   527   e-148 
UniRef100_B7NEF9 DNA-binding transcriptional dual regulator n=1 ...   518   e-145 
UniRef100_B1LJ59 Transcriptional regulator GadX n=1 Tax=Escheric...   506   e-142 
UniRef100_Q9EYV5 HTH-type transcriptional regulator gadX n=1 Tax...   505   e-141 
UniRef100_B7NNF0 DNA-binding transcriptional dual regulator n=1 ...   503   e-141 
UniRef100_Q8FCI6 HTH-type transcriptional regulator gadX n=5 Tax...   502   e-140 
UniRef100_Q0TBT8 Transcriptional regulator GadX n=2 Tax=Escheric...   502   e-140 
UniRef100_B7N1G3 DNA-binding transcriptional dual regulator n=1 ...   499   e-140 
UniRef100_B7MEL8 DNA-binding transcriptional dual regulator n=1 ...   498   e-139 
UniRef100_B1EID9 HTH-type transcriptional regulator GadX n=1 Tax...   395   e-108 
UniRef100_Q5G2X8 Putative Arac-type regulatory protein (Fragment...   331   5e-89 
UniRef100_B7LQH5 HTH-type transcriptional regulator gadX for glu...   218   4e-55 
UniRef100_P10805 Porin thermoregulatory protein envY n=2 Tax=Esc...   147   8e-34 
UniRef100_B1LKF6 Transcriptional regulator, AraC family n=2 Tax=...   147   1e-33 
UniRef100_B3IK21 Transcriptional regulator, AraC family n=1 Tax=...   146   2e-33 
UniRef100_C3TKG7 Envelope protein EnvY n=15 Tax=Enterobacteriace...   146   2e-33 
UniRef100_B7M4P0 DNA-binding transcriptional activator of porin ...   146   2e-33 
UniRef100_Q93GS4 SdiA-regulated gene;putative bacterial regulato...   145   3e-33 
UniRef100_B6I1G5 Putative phage envelope protein n=1 Tax=Escheri...   145   5e-33 
UniRef100_Q9EUG8 SrgC n=1 Tax=Salmonella enterica subsp. enteric...   145   5e-33 
UniRef100_A7ZIU5 Transcriptional regulator, AraC family n=6 Tax=...   145   5e-33 
UniRef100_Q3Z4N0 Envelope protein n=1 Tax=Shigella sonnei Ss046 ...   144   8e-33 
UniRef100_Q0T765 Envelope protein n=2 Tax=Shigella flexneri RepI...   144   8e-33 
UniRef100_B1EKG2 Porin thermoregulatory protein EnvY n=1 Tax=Esc...   142   3e-32 
UniRef100_B7LPV9 Envelope protein; thermoregulation of porin bio...   142   4e-32 
UniRef100_Q6J178 Putative AraC family regulatory protein n=1 Tax...   141   6e-32 
UniRef100_C2BBW6 Putative uncharacterized protein n=1 Tax=Citrob...   137   1e-30 
UniRef100_C1MFP5 HTH-type transcriptional regulator adiY n=1 Tax...   137   1e-30 
UniRef100_B7LL54 DNA-binding transcriptional activator n=1 Tax=E...   136   2e-30 
UniRef100_B3IGV8 Transcriptional regulator AdiY n=1 Tax=Escheric...   135   5e-30 
UniRef100_B3WYW3 Transcriptional regulator AdiY n=1 Tax=Shigella...   134   1e-29 
UniRef100_P33234 HTH-type transcriptional regulator adiY n=4 Tax...   134   1e-29 
UniRef100_B7NSS8 DNA-binding transcriptional activator n=1 Tax=E...   133   2e-29 
UniRef100_B5BK16 Putative AraC family regulatory protein n=3 Tax...   133   2e-29 
UniRef100_B4T2J6 Porin thermoregulatory protein EnvY n=3 Tax=Sal...   133   2e-29 
UniRef100_B4TS80 Porin thermoregulatory protein EnvY n=4 Tax=Sal...   133   2e-29 
UniRef100_A7ZUY6 Transcriptional regulator AdiY n=38 Tax=Enterob...   133   2e-29 
UniRef100_B5NPC4 Porin thermoregulatory protein EnvY n=1 Tax=Sal...   133   2e-29 
UniRef100_B5MPV8 Porin thermoregulatory protein EnvY n=1 Tax=Sal...   133   2e-29 
UniRef100_B4AA01 Porin thermoregulatory protein EnvY n=1 Tax=Sal...   133   2e-29 
UniRef100_B1EQG2 Transcriptional regulator AdiY n=1 Tax=Escheric...   133   2e-29 
UniRef100_B5R960 Putative AraC family regulatory protein n=1 Tax...   132   3e-29 
UniRef100_B5P6C5 Porin thermoregulatory protein EnvY n=4 Tax=Sal...   132   3e-29 
UniRef100_B4TED4 Porin thermoregulatory protein EnvY n=5 Tax=Sal...   132   3e-29 
UniRef100_B3H9N5 Transcriptional regulator AdiY n=1 Tax=Escheric...   132   3e-29 
UniRef100_B5FRG9 Porin thermoregulatory protein EnvY n=1 Tax=Sal...   132   3e-29 
UniRef100_B3YHW4 Porin thermoregulatory protein EnvY n=1 Tax=Sal...   132   4e-29 
UniRef100_A9MGH0 Putative uncharacterized protein n=1 Tax=Salmon...   131   7e-29 
UniRef100_Q04819 ORF11 n=1 Tax=Salmonella enterica subsp. enteri...   126   2e-27 
UniRef100_Q0T4Q2 Putative ARAC-type regulatory protein n=1 Tax=S...   105   6e-21 
UniRef100_B7URN2 Predicted DNA-binding transcriptional activator...   105   6e-21 
UniRef100_B7MUS4 Putative DNA-binding transcriptional acfivator,...   104   7e-21 
UniRef100_B7M6J8 Putative AraC-type regulatory protein encoded i...   103   1e-20 
UniRef100_C2DR48 Transcriptional regulator YdeO n=1 Tax=Escheric...   103   1e-20 
UniRef100_B1LFB7 Transcriptional regulator, AraC family n=2 Tax=...   103   2e-20 
UniRef100_B3XF72 Putative AraC-type regulatory protein encoded i...   103   2e-20 
UniRef100_B3WXL3 Transcriptional regulator, AraC family n=1 Tax=...   103   2e-20 
UniRef100_Q1RBS3 Putative ARAC-type regulatory protein n=1 Tax=E...   103   2e-20 
UniRef100_A7ZLU7 Transcriptional regulator, AraC family n=2 Tax=...   103   2e-20 
UniRef100_B3IEU7 Transcriptional regulator, AraC family n=1 Tax=...   103   2e-20 
UniRef100_B5Z1K1 Putative transcription regulator n=11 Tax=Esche...   103   2e-20 
UniRef100_A8A056 Transcriptional regulator, AraC family n=9 Tax=...   103   2e-20 
UniRef100_Q83RF4 HTH-type transcriptional regulator ydeO n=1 Tax...   103   2e-20 
UniRef100_Q8FHG0 HTH-type transcriptional regulator ydeO n=1 Tax...   103   2e-20 
UniRef100_Q32FX4 Putative ARAC-type regulatory protein n=1 Tax=S...   102   3e-20 
UniRef100_C1HKP4 Transcriptional regulator YdeO n=3 Tax=Escheric...   102   3e-20 
UniRef100_B3I6S9 Transcriptional regulator, AraC family n=2 Tax=...   102   3e-20 
UniRef100_Q8X4Z9 HTH-type transcriptional regulator ydeO n=12 Ta...   102   3e-20 
UniRef100_Q3Z1P3 Putative ARAC-type regulatory protein n=1 Tax=S...   102   4e-20 
UniRef100_B7N4R1 Putative DNA-binding transcriptional acfivator,...   102   4e-20 
UniRef100_B3HU92 Transcriptional regulator, AraC family n=2 Tax=...   102   4e-20 
UniRef100_UPI0001913473 porin thermoregulatory protein EnvY n=2 ...   100   1e-19 
UniRef100_B7LQH4 GadW HTH-type(AraC-type) transcriptional positi...   100   1e-19 
UniRef100_P76135 HTH-type transcriptional regulator ydeO n=2 Tax...   100   1e-19 
UniRef100_B1EID8 HTH-type transcriptional regulator gadW n=1 Tax...   100   2e-19 
UniRef100_B7N1G2 DNA-binding transcriptional activator n=1 Tax=E...    99   3e-19 
UniRef100_B7UL68 DNA-binding transcriptional activator n=1 Tax=E...    99   4e-19 
UniRef100_Q8FCI7 HTH-type transcriptional regulator gadW n=8 Tax...    99   4e-19 
UniRef100_B1LJ58 Transcriptional regulator GadW n=1 Tax=Escheric...    97   1e-18 
UniRef100_UPI000190BB07 araC family regulatory protein n=1 Tax=S...    97   2e-18 
UniRef100_B5Q4B7 AraC family regulatory protein n=1 Tax=Salmonel...    97   2e-18 
UniRef100_B4T2L5 AraC family regulatory protein n=13 Tax=Salmone...    97   2e-18 
UniRef100_B5BK33 AraC family regulatory protein n=8 Tax=Salmonel...    97   2e-18 
UniRef100_P05052 HTH-type transcriptional regulator appY n=3 Tax...    97   2e-18 
UniRef100_UPI000190B1A4 putative AraC family regulatory protein ...    97   2e-18 
UniRef100_B7NEF8 DNA-binding transcriptional activator n=2 Tax=E...    97   2e-18 
UniRef100_B5FRI8 AraC family regulatory protein n=1 Tax=Salmonel...    97   2e-18 
UniRef100_Q31VB0 Putative ARAC-type regulatory protein n=1 Tax=S...    96   5e-18 
UniRef100_B7N3S5 Putative araC-type regulatory protein from bact...    96   5e-18 
UniRef100_B3WPD9 Transcriptional regulator GadW n=1 Tax=Escheric...    96   5e-18 
UniRef100_B2U4I0 Transcriptional regulator GadW n=8 Tax=Enteroba...    96   5e-18 
UniRef100_P63202 HTH-type transcriptional regulator gadW n=21 Ta...    96   5e-18 
UniRef100_Q8ZKC9 Putative AraC-type DNA-binding domain-containin...    95   6e-18 
UniRef100_C0Q589 AraC family regulatory protein n=2 Tax=Salmonel...    95   6e-18 
UniRef100_Q93SE2 Putative uncharacterized protein n=1 Tax=Escher...    95   6e-18 
UniRef100_A7ZT55 Transcriptional regulator GadW n=1 Tax=Escheric...    94   1e-17 
UniRef100_B3WVH7 Transcriptional regulator GadW n=1 Tax=Shigella...    94   1e-17 
UniRef100_A9MFU3 Putative uncharacterized protein n=1 Tax=Salmon...    93   3e-17 
UniRef100_B8Y8G0 Invasion protein HilD n=1 Tax=Salmonella enteri...    91   1e-16 
UniRef100_B5NNQ3 Transcriptional regulator HilD n=1 Tax=Salmonel...    90   2e-16 
UniRef100_UPI0001913103 AraC-family transcriptional regulator n=...    90   2e-16 
UniRef100_Q8Z498 AraC-family transcriptional regulator n=1 Tax=S...    90   2e-16 
UniRef100_B4TFR7 Transcriptional regulator HilD n=3 Tax=Salmonel...    90   2e-16 
UniRef100_B5NBK6 Transcriptional regulator HilD n=1 Tax=Salmonel...    90   2e-16 
UniRef100_B5N503 Transcriptional regulator HilD n=1 Tax=Salmonel...    90   2e-16 
UniRef100_B4T404 Transcriptional regulator HilD n=4 Tax=Salmonel...    90   2e-16 
UniRef100_P41782 Transcriptional regulator hilD n=13 Tax=Salmone...    90   2e-16 
UniRef100_B5MK53 Transcriptional regulator HilD n=1 Tax=Salmonel...    89   4e-16 
UniRef100_B5FT26 Transcriptional regulator HilD n=1 Tax=Salmonel...    89   6e-16 
UniRef100_A9MF99 Putative uncharacterized protein n=1 Tax=Salmon...    88   7e-16 
UniRef100_B7LNC5 Putative araC-type regulatory protein from bact...    87   1e-15 
UniRef100_A8A0B4 Putative transcriptional regulator, AraC family...    87   2e-15 
UniRef100_B5YTX9 Putative envelope protein encoded within propha...    86   3e-15 
UniRef100_B3ICY2 Putative transcriptional regulator n=1 Tax=Esch...    86   3e-15 
UniRef100_UPI00000D0509 putative transcriptional regulator n=1 T...    85   8e-15 
UniRef100_Q8XC44 Putative ARAC-type regulatory protein of CP-933...    85   8e-15 
UniRef100_A7ZH67 HTH-type transcriptional regulator YdeO n=2 Tax...    85   8e-15 
UniRef100_B5Z2Y4 Putative transcriptional regulator n=10 Tax=Esc...    85   8e-15 
UniRef100_B7MET2 Putative ARAC-type regulatory protein from phag...    84   1e-14 
UniRef100_B8Y8F2 Invasion regulatory protein HilC n=1 Tax=Salmon...    82   7e-14 
UniRef100_UPI00019140E7 AraC family transcription regulator n=5 ...    81   1e-13 
UniRef100_B4T3E0 Transcriptional regulator, AraC family n=20 Tax...    81   1e-13 
UniRef100_Q9R3W3 Transcriptional regulator sirC n=4 Tax=Salmonel...    81   1e-13 
UniRef100_Q8Z4A6 Transcriptional regulator sirC n=2 Tax=Salmonel...    81   1e-13 
UniRef100_A9MFA7 Putative uncharacterized protein n=1 Tax=Salmon...    80   2e-13 
UniRef100_Q93I75 CofS n=1 Tax=Escherichia coli RepID=Q93I75_ECOLX      80   2e-13 
UniRef100_Q0TB98 Putative CS12 fimbrial-like upstream regulatory...    79   3e-13 
UniRef100_Q8GA53 Putative CS12 fimbrial-like upstream regulatory...    79   3e-13 
UniRef100_A7XY51 LngS n=1 Tax=Escherichia coli RepID=A7XY51_ECOLX      79   4e-13 
UniRef100_Q9F871 PerA n=1 Tax=Escherichia coli RepID=Q9F871_ECOLX      78   1e-12 
UniRef100_Q9F872 PerA n=1 Tax=Escherichia coli RepID=Q9F872_ECOLX      77   1e-12 
UniRef100_Q9F873 PerA n=1 Tax=Escherichia coli RepID=Q9F873_ECOLX      77   2e-12 
UniRef100_Q9ALL2 CS12 fimbria upstream putative regulatory prote...    77   2e-12 
UniRef100_Q9F884 PerA n=1 Tax=Escherichia coli RepID=Q9F884_ECOLX      76   3e-12 
UniRef100_Q47074 BfpT n=2 Tax=Escherichia coli RepID=Q47074_ECOLX      76   3e-12 
UniRef100_A2T8T1 PerA n=1 Tax=Escherichia coli RepID=A2T8T1_ECOLX      76   3e-12 
UniRef100_Q9F882 PerA n=1 Tax=Escherichia coli RepID=Q9F882_ECOLX      76   4e-12 
UniRef100_Q9F878 PerA n=1 Tax=Escherichia coli RepID=Q9F878_ECOLX      76   4e-12 
UniRef100_Q9EZ03 PerA n=1 Tax=Escherichia coli RepID=Q9EZ03_ECOLX      76   4e-12 
UniRef100_Q9APE6 PerA n=1 Tax=Escherichia coli RepID=Q9APE6_ECOLX      76   4e-12 
UniRef100_A2T8R3 PerA n=1 Tax=Escherichia coli RepID=A2T8R3_ECOLX      76   4e-12 
UniRef100_A2T8Q9 PerA n=1 Tax=Escherichia coli RepID=A2T8Q9_ECOLX      76   4e-12 
UniRef100_A2T8Q5 PerA n=1 Tax=Escherichia coli RepID=A2T8Q5_ECOLX      76   4e-12 
UniRef100_A2T8Q1 PerA n=1 Tax=Escherichia coli RepID=A2T8Q1_ECOLX      76   4e-12 
UniRef100_A2T8P5 PerA n=1 Tax=Escherichia coli RepID=A2T8P5_ECOLX      76   4e-12 
UniRef100_A2T8N0 PerA n=1 Tax=Escherichia coli RepID=A2T8N0_ECOLX      76   4e-12 
UniRef100_P43459 Transcriptional activator perA n=2 Tax=Escheric...    76   4e-12 
UniRef100_A2T8N6 PerA n=1 Tax=Escherichia coli RepID=A2T8N6_ECOLX      75   5e-12 
UniRef100_B5FSI7 SefR n=1 Tax=Salmonella enterica subsp. enteric...    75   6e-12 
UniRef100_B5BKV0 Fimbrial regulator n=2 Tax=Salmonella enterica ...    75   6e-12 
UniRef100_B5R1L9 Fimbrial operon positive regulatory protein n=2...    75   6e-12 
UniRef100_Q9F877 PerA n=1 Tax=Escherichia coli RepID=Q9F877_ECOLX      75   6e-12 
UniRef100_Q02458 Urease operon transcriptional activator n=1 Tax...    75   6e-12 
UniRef100_UPI000190EB5C transcriptional regulator HilD n=1 Tax=S...    75   8e-12 
UniRef100_C2LNP6 Urease operon transcriptional activator n=1 Tax...    75   8e-12 
UniRef100_A2T8S3 PerA n=1 Tax=Escherichia coli RepID=A2T8S3_ECOLX      75   8e-12 
UniRef100_A2T8P9 PerA n=1 Tax=Escherichia coli RepID=A2T8P9_ECOLX      75   8e-12 
UniRef100_P32326 Urease operon transcriptional activator n=1 Tax...    75   8e-12 
UniRef100_UPI000190F266 fimbrial operon positive regulatory prot...    74   1e-11 
UniRef100_A2T8S1 PerA n=1 Tax=Escherichia coli RepID=A2T8S1_ECOLX      74   1e-11 
UniRef100_Q65QI0 AraC protein n=1 Tax=Mannheimia succiniciproduc...    74   1e-11 
UniRef100_B5R9N2 Fimbrial operon positive regulatory protein n=1...    74   1e-11 
UniRef100_Q9L6K7 Putative activator protein SefR n=1 Tax=Salmone...    74   2e-11 
UniRef100_A4XTP8 Transcriptional regulator, AraC family n=1 Tax=...    73   2e-11 
UniRef100_C2LMQ1 Virulence regulon transcriptional activator Vir...    73   2e-11 
UniRef100_P23774 987P fimbrial operon positive regulatory protei...    73   3e-11 
UniRef100_UPI0001902239 transcriptional regulator n=1 Tax=Mycoba...    72   4e-11 
UniRef100_UPI00019012B6 transcriptional regulator n=1 Tax=Mycoba...    72   4e-11 
UniRef100_UPI00005EE536 transcriptional regulator n=1 Tax=Mycoba...    72   4e-11 
UniRef100_Q8GA34 AraC-like transcriptional regulator n=2 Tax=Esc...    72   4e-11 
UniRef100_P68913 Uncharacterized HTH-type transcriptional regula...    72   4e-11 
UniRef100_Q9ALK0 Probable CS12 fimbria transcriptional activator...    72   5e-11 
UniRef100_P25393 CFA/I fimbrial subunit D n=1 Tax=Escherichia co...    71   9e-11 
UniRef100_A7ZGX7 Transcriptional regulator, AraC family n=1 Tax=...    71   1e-10 
UniRef100_A6WTM9 Helix-turn-helix-domain containing protein AraC...    71   1e-10 
UniRef100_P16114 Regulatory protein rns n=2 Tax=Escherichia coli...    71   1e-10 
UniRef100_Q87NV3 Putative uncharacterized protein VP1765 n=1 Tax...    70   2e-10 
UniRef100_B6XD52 Putative uncharacterized protein n=1 Tax=Provid...    70   2e-10 
UniRef100_UPI0001A4439F AraC family transcriptional regulator n=...    70   3e-10 
UniRef100_UPI000190C2F3 AraC family transcription regulator n=1 ...    70   3e-10 
UniRef100_Q8EJY9 Transcriptional regulator, AraC/XylS family n=1...    70   3e-10 
UniRef100_A6AXU3 Transcriptional regulator, AraC family protein ...    70   3e-10 
UniRef100_Q5DYJ4 Transcriptional regulator, AraC family n=1 Tax=...    69   3e-10 
UniRef100_B1KQG3 Transcriptional regulator, AraC family n=1 Tax=...    69   3e-10 
UniRef100_A9L662 Transcriptional regulator, AraC family n=2 Tax=...    69   3e-10 
UniRef100_Q08JQ9 HdaR, HUS-associated diffuse adherence homologo...    69   3e-10 
UniRef100_B3IA36 Virulence regulon transcriptional activator Vir...    69   3e-10 
UniRef100_A2PNS5 Transcriptional regulator, AraC family protein ...    69   5e-10 
UniRef100_A3D9Y4 Transcriptional regulator, AraC family n=1 Tax=...    69   6e-10 
UniRef100_UPI000197857F two component AraC family transcriptiona...    68   8e-10 
UniRef100_P43464 Transcriptional activator aggR n=3 Tax=Escheric...    68   8e-10 
UniRef100_UPI000190681C probable transcriptional regulator prote...    68   1e-09 
UniRef100_UPI0001905319 probable transcriptional regulator prote...    68   1e-09 
UniRef100_B3C9G8 Sensor protein n=1 Tax=Bacteroides intestinalis...    68   1e-09 
UniRef100_A3J4H6 Two-component system sensor histidine kinase/re...    67   1e-09 
UniRef100_P43460 HTH-type transcriptional activator csvR n=1 Tax...    67   1e-09 
UniRef100_C0AZC3 Putative uncharacterized protein n=1 Tax=Proteu...    67   2e-09 
UniRef100_UPI00019694C8 hypothetical protein BACCELL_02042 n=1 T...    67   2e-09 
UniRef100_UPI000191377F putative AraC family regulatory protein ...    67   2e-09 
UniRef100_B0UQ60 Transcriptional regulator, AraC family n=1 Tax=...    67   2e-09 
UniRef100_A8S4U5 Putative uncharacterized protein n=1 Tax=Clostr...    67   2e-09 
UniRef100_UPI0000F30067 putative transcriptional regulator AraC/...    66   3e-09 
UniRef100_B2I0Q2 AraC-type DNA-binding domain-containing protein...    66   3e-09 
UniRef100_A3M9Q0 Putative transcriptional regulator AraC/XylS fa...    66   3e-09 
UniRef100_A6B243 Transcriptional activator of virulence loci n=1...    66   3e-09 
UniRef100_UPI0001902531 probable transcriptional regulator prote...    66   4e-09 
UniRef100_B5ZYE2 Transcriptional regulator, AraC family n=1 Tax=...    66   4e-09 
UniRef100_Q2BYZ8 Transcriptional regulator, AraC family protein ...    66   4e-09 
UniRef100_UPI000190274D probable transcriptional regulator prote...    65   5e-09 
UniRef100_C0MC33 Response regulator protein n=1 Tax=Streptococcu...    65   5e-09 
UniRef100_B3PYH1 Probable transcriptional regulator protein, Ara...    65   5e-09 
UniRef100_Q1ZQR4 Transcriptional regulator, AraC family protein ...    65   5e-09 
UniRef100_C3MCY3 Transcriptional regulator, AraC family n=1 Tax=...    65   5e-09 
UniRef100_C0D1T3 Putative uncharacterized protein n=1 Tax=Clostr...    65   5e-09 
UniRef100_B0J2D3 Helix-turn-helix-domain containing protein AraC...    65   5e-09 
UniRef100_UPI000190990B probable transcriptional regulator prote...    65   7e-09 
UniRef100_Q6D4D4 Putative AraC-family transcriptional regulator ...    65   7e-09 
UniRef100_B3CBW2 Sensor protein n=1 Tax=Bacteroides intestinalis...    65   7e-09 
UniRef100_B1EFR0 Regulatory protein rns n=1 Tax=Escherichia albe...    65   7e-09 
UniRef100_UPI0001909F00 probable transcriptional regulator prote...    65   9e-09 
UniRef100_A0L217 Transcriptional regulator, AraC family n=1 Tax=...    65   9e-09 
UniRef100_P0A2T2 Virulence regulon transcriptional activator vir...    65   9e-09 
UniRef100_Q1Z1H2 Transcriptional regulator, AraC family protein ...    65   9e-09 
UniRef100_UPI0001A446EF AraC family transcriptional regulator n=...    64   1e-08 
UniRef100_Q0I019 Transcriptional regulator, AraC family n=1 Tax=...    64   1e-08 
UniRef100_Q769J8 Urease operon transcriptional activator n=1 Tax...    64   1e-08 
UniRef100_UPI0001850904 two-component response regulator n=1 Tax...    64   1e-08 
UniRef100_B1LK31 Putative fimbrial operon positive regulatory pr...    64   1e-08 
UniRef100_B7TXZ2 UreR (Fragment) n=1 Tax=Vibrio parahaemolyticus...    64   1e-08 
UniRef100_A6GTF5 Transcriptional regulator, AraC family protein ...    64   1e-08 
UniRef100_A6D1Y4 Transcriptional regulator, AraC family protein ...    64   1e-08 
UniRef100_C0MHD3 Response regulator protein n=1 Tax=Streptococcu...    64   2e-08 
UniRef100_A1TWU6 Transcriptional regulator, AraC family n=1 Tax=...    64   2e-08 
UniRef100_B7TXZ0 UreR (Fragment) n=1 Tax=Vibrio parahaemolyticus...    64   2e-08 
UniRef100_B3XEA9 Regulatory protein rns n=1 Tax=Escherichia coli...    64   2e-08 
UniRef100_A6FIN9 Putative transcriptional regulator, AraC/XylS f...    64   2e-08 
UniRef100_A6B6J4 Putative CFA/I fimbrial subunit D n=2 Tax=Vibri...    64   2e-08 
UniRef100_Q9FAT4 Urease operon transcriptional activator UreR n=...    63   2e-08 
UniRef100_B7TXZ8 UreR (Fragment) n=1 Tax=Vibrio parahaemolyticus...    63   2e-08 
UniRef100_A4IP91 Two-component response regulator n=2 Tax=Geobac...    63   2e-08 
UniRef100_Q8D7K7 AraC-type DNA-binding domain-containing protein...    63   3e-08 
UniRef100_Q7MEL5 AraC-type DNA-binding domain-containing protein...    63   3e-08 
UniRef100_B4U4B3 TCS response regulator YesN-like n=1 Tax=Strept...    63   3e-08 
UniRef100_B6EB34 RegA n=1 Tax=Citrobacter rodentium RepID=B6EB34...    63   3e-08 
UniRef100_B4X095 Transcriptional regulator, AraC family protein ...    63   3e-08 
UniRef100_Q4KDB9 Transcriptional regulator, AraC family n=1 Tax=...    62   4e-08 
UniRef100_Q2KDH2 Probable transcriptional regulator protein, Ara...    62   4e-08 
UniRef100_B8FUQ5 Transcriptional regulator, AraC family n=2 Tax=...    62   4e-08 
UniRef100_C1HX61 Putative uncharacterized protein n=1 Tax=Neisse...    62   4e-08 
UniRef100_UPI00019116CF bacterial regulatory protein, AraC famil...    62   6e-08 
UniRef100_UPI000011E57D putative transcriptional regulator n=1 T...    62   6e-08 
UniRef100_B6EKX1 HTH-type transcriptional regulator, AraC family...    62   6e-08 
UniRef100_B5R6D5 Putative transcriptional regulator n=1 Tax=Salm...    62   6e-08 
UniRef100_B5FR11 Bacterial regulatory protein, AraC family n=2 T...    62   6e-08 
UniRef100_Q9F5Q9 Toxin co-regulated pilus virulence regulatory p...    62   6e-08 
UniRef100_B7YCL8 Two component transcriptional regulator, AraC f...    62   6e-08 
UniRef100_B7TY06 Truncated UreR (Fragment) n=1 Tax=Vibrio algino...    62   6e-08 
UniRef100_B4T211 Bacterial regulatory protein, AraC family n=6 T...    62   6e-08 
UniRef100_A3UUH2 Transcriptional regulator n=1 Tax=Vibrio splend...    62   6e-08 
UniRef100_Q5F813 Putative AraC-family transcriptional regulator ...    62   7e-08 
UniRef100_B4RKY9 Putative AraC-family transcriptional regulator ...    62   7e-08 
UniRef100_Q09LZ6 Two-component response regulator n=1 Tax=Geobac...    62   7e-08 
UniRef100_B5NIA3 Bacterial regulatory protein n=1 Tax=Salmonella...    62   7e-08 
UniRef100_B4TE08 Bacterial regulatory protein n=14 Tax=Salmonell...    62   7e-08 
UniRef100_B0P9Q1 Putative uncharacterized protein n=1 Tax=Anaero...    62   7e-08 
UniRef100_A0Z3Z2 Transcriptional regulator, AraC family protein ...    62   7e-08 
UniRef100_Q5X3N2 Putative uncharacterized protein n=1 Tax=Legion...    61   9e-08 
UniRef100_Q5WV20 Putative uncharacterized protein n=1 Tax=Legion...    61   9e-08 
UniRef100_B9MLQ2 Two component transcriptional regulator, AraC f...    61   9e-08 
UniRef100_B7VSB9 Putative AraC-type regulatory protein n=1 Tax=V...    61   9e-08 
UniRef100_A5IDK3 Transcriptional regulator OruR, AraC family n=1...    61   9e-08 
UniRef100_Q9F5R4 Toxin co-regulated pilus virulence regulatory p...    61   9e-08 
UniRef100_Q9F5R1 Toxin co-regulated pilus virulence regulatory p...    61   9e-08 
UniRef100_Q9F5Q7 Toxin co-regulated pilus virulence regulatory p...    61   9e-08 
UniRef100_B7AFY7 Sensor protein n=1 Tax=Bacteroides eggerthii DS...    61   9e-08 
UniRef100_B5JTW9 Helix-turn-helix-domain containing protein, Ara...    61   9e-08 
UniRef100_A3XW16 AraC-type DNA-binding domain-containing protein...    61   9e-08 
UniRef100_A3UL31 AraC-type DNA-binding domain-containing protein...    61   9e-08 
UniRef100_A3EID6 TCP pilus virulence regulatory protein n=1 Tax=...    61   9e-08 
UniRef100_A5F384 TCP pilus virulence regulatory protein n=14 Tax...    61   9e-08 
UniRef100_Q5ZTY8 Transcriptional regulator OruR, AraC family n=1...    61   1e-07 
UniRef100_B7VT65 AraC-type DNA-binding domain-containing protein...    61   1e-07 
UniRef100_B9D658 Transcriptional regulator, AraC family n=1 Tax=...    61   1e-07 
UniRef100_A5KVM3 Transcriptional regulator n=1 Tax=Vibrionales b...    61   1e-07 
UniRef100_B7V8F6 Probable transcriptional regulator n=4 Tax=Pseu...    61   1e-07 
UniRef100_A6T768 Bacterial regulatory protein, AraC family n=1 T...    60   2e-07 
UniRef100_A4TFK9 Transcriptional regulator, AraC family n=1 Tax=...    60   2e-07 
UniRef100_B4AB72 Bacterial regulatory protein n=1 Tax=Salmonella...    60   2e-07 
UniRef100_Q21JI5 Transcriptional regulator, AraC family n=1 Tax=...    60   2e-07 
UniRef100_Q0TS33 Transcriptional regulator, AraC family n=1 Tax=...    60   2e-07 
UniRef100_B1RMC8 Transcriptional regulator, AraC family n=1 Tax=...    60   2e-07 
UniRef100_B1BJF7 Transcriptional regulator, AraC family n=1 Tax=...    60   2e-07 
UniRef100_A7VPJ4 Putative uncharacterized protein n=1 Tax=Clostr...    60   2e-07 
UniRef100_UPI000197BC5C hypothetical protein PROVRETT_02813 n=1 ...    60   3e-07 
UniRef100_UPI0001913DAC bacterial regulatory protein, AraC famil...    60   3e-07 
UniRef100_UPI00006DCC69 hypothetical protein CdifQ_04003106 n=1 ...    60   3e-07 
UniRef100_Q87IW1 Putative transcriptional regulator, AraC/XylS f...    60   3e-07 
UniRef100_Q2SCQ2 AraC-type DNA-binding domain-containing protein...    60   3e-07 
UniRef100_Q21KL2 Transcriptional regulator, AraC family n=1 Tax=...    60   3e-07 
UniRef100_A8EX63 Transcriptional regulator, AraC family n=1 Tax=...    60   3e-07 
UniRef100_A6VXK4 Helix-turn-helix-domain containing protein AraC...    60   3e-07 
UniRef100_A6V2K7 Probable transcriptional regulator n=1 Tax=Pseu...    60   3e-07 
UniRef100_A6TUU3 Response regulator receiver protein n=1 Tax=Alk...    60   3e-07 
UniRef100_Q2BQP9 Probable transcriptional regulator n=1 Tax=Nept...    60   3e-07 
UniRef100_B5CUG3 Sensor protein n=1 Tax=Bacteroides plebeius DSM...    60   3e-07 
UniRef100_B3K740 Helix-turn-helix-domain containing protein AraC...    60   3e-07 
UniRef100_B1RCM9 Transcriptional regulator, AraC family n=1 Tax=...    60   3e-07 
UniRef100_B1BTJ3 Transcriptional regulator, AraC family n=1 Tax=...    60   3e-07 
UniRef100_A6B2H7 AraC-type DNA-binding domain-containing protein...    60   3e-07 
UniRef100_UPI0001978F34 hypothetical protein Cbac1_15105 n=1 Tax...    59   4e-07 
UniRef100_UPI000196D410 hypothetical protein BRYFOR_04474 n=1 Ta...    59   4e-07 
UniRef100_UPI0001968F97 hypothetical protein BACCELL_03129 n=1 T...    59   4e-07 
UniRef100_B5XY36 Putative transcriptional regulator, AraC family...    59   4e-07 
UniRef100_A8GCY9 Transcriptional regulator, AraC family n=1 Tax=...    59   4e-07 
UniRef100_A8FAK6 AraC family transcriptional regulator n=1 Tax=B...    59   4e-07 
UniRef100_A6KXQ8 Sensor protein n=1 Tax=Bacteroides vulgatus ATC...    59   4e-07 
UniRef100_C2ELJ2 AraC family transcriptional regulator n=2 Tax=L...    59   4e-07 
UniRef100_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostr...    59   4e-07 
UniRef100_B1R5A3 Transcriptional regulator, AraC family n=1 Tax=...    59   4e-07 
UniRef100_Q02Q22 Putative transcriptional regulator, AraC family...    59   5e-07 
UniRef100_C0Z962 Probable two-component response regulator n=1 T...    59   5e-07 
UniRef100_B3C5Z2 Sensor protein n=1 Tax=Bacteroides intestinalis...    59   5e-07 
UniRef100_B1DHI6 Two component transcriptional regulator, AraC f...    59   5e-07 
UniRef100_A6GMI7 Putative transcriptional regulator, AraC family...    59   5e-07 
UniRef100_A3YHR0 Transcriptional regulator, AraC family protein ...    59   5e-07 
UniRef100_UPI0001968F18 hypothetical protein BACCELL_00802 n=1 T...    59   6e-07 
UniRef100_Q9K6P9 Two-component response regulator n=1 Tax=Bacill...    59   6e-07 
UniRef100_Q1V7Y3 Putative transcriptional regulator, AraC/XylS f...    59   6e-07 
UniRef100_B8L3M5 Transcriptional regulator n=1 Tax=Stenotrophomo...    59   6e-07 
UniRef100_B7YN47 Transcriptional regulator, AraC family n=1 Tax=...    59   6e-07 
UniRef100_B4X4H5 Transcriptional regulator, AraC family protein ...    59   6e-07 
UniRef100_A6CVY2 Putative transcriptional regulator, AraC/XylS f...    59   6e-07 
UniRef100_A2PU27 Transcriptional regulator, AraC/XylS family n=1...    59   6e-07 
UniRef100_C3LTX4 Transcriptional regulator, AraC/XylS family n=1...    59   6e-07 
UniRef100_Q7CUB1 Transcriptional regulator, AraC family n=1 Tax=...    58   8e-07 
UniRef100_Q0VN05 Transcriptional regulator, AraC family n=1 Tax=...    58   8e-07 
UniRef100_Q02LP3 Putative transcriptional regulator, AraC family...    58   8e-07 
UniRef100_A4SQE4 Transcriptional regulator, AraC/XylS family n=1...    58   8e-07 
UniRef100_A0Q2M6 Transcriptional regulatory protein n=1 Tax=Clos...    58   8e-07 
UniRef100_Q2BPK8 Putative transcriptional regulator, AraC/XylS f...    58   8e-07 
UniRef100_Q1YRD2 Putative transcriptional regulator (AraC family...    58   8e-07 
UniRef100_C3RF16 Two-component system sensor histidine kinase/re...    58   8e-07 
UniRef100_C3Q665 Two-component system sensor histidine kinase/re...    58   8e-07 
UniRef100_C2IW42 Transcriptional regulator AraC/XylS family n=1 ...    58   8e-07 
UniRef100_C0D596 Putative uncharacterized protein n=1 Tax=Clostr...    58   8e-07 
UniRef100_B6VVF0 Sensor protein n=1 Tax=Bacteroides dorei DSM 17...    58   8e-07 
UniRef100_A6F333 Transcriptional regulator, AraC family protein ...    58   8e-07 
UniRef100_A6A0L7 Transcriptional regulator, AraC/XylS family n=1...    58   8e-07 
UniRef100_B7VA07 Probable transcriptional regulator n=2 Tax=Pseu...    58   8e-07 
UniRef100_UPI00005F8CF8 COG2207: AraC-type DNA-binding domain-co...    58   1e-06 
UniRef100_Q7MJE3 AraC-type DNA-binding domain-containing protein...    58   1e-06 
UniRef100_Q6LNN1 Putative transcriptional regulator n=1 Tax=Phot...    58   1e-06 
UniRef100_Q5WK40 Two-component response regulator n=1 Tax=Bacill...    58   1e-06 
UniRef100_Q15UT2 Sensor protein n=1 Tax=Pseudoalteromonas atlant...    58   1e-06 
UniRef100_Q1Z8C4 Putative transcriptional regulator n=1 Tax=Phot...    58   1e-06 
UniRef100_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusoba...    58   1e-06 
UniRef100_B1DGG7 Transcriptional regulator, AraC family n=1 Tax=...    58   1e-06 
UniRef100_B1B929 Transcriptional regulatory protein n=1 Tax=Clos...    58   1e-06 
UniRef100_A7VU71 Putative uncharacterized protein n=1 Tax=Clostr...    58   1e-06 
UniRef100_A6B7T3 AraC-type DNA-binding domain-containing protein...    58   1e-06 
UniRef100_A4CH85 Serine/threonine kinase n=1 Tax=Robiginitalea b...    58   1e-06 
UniRef100_UPI000196BF0B hypothetical protein BRYFOR_00452 n=1 Ta...    57   1e-06 
UniRef100_UPI00005F9D26 COG2207: AraC-type DNA-binding domain-co...    57   1e-06 
UniRef100_A7N692 Putative uncharacterized protein n=1 Tax=Vibrio...    57   1e-06 
UniRef100_C1RRN5 DNA-binding domain-containing protein, AraC-typ...    57   1e-06 
UniRef100_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brev...    57   1e-06 
UniRef100_B8K5I2 Transcriptional regulator n=1 Tax=Vibrio paraha...    57   1e-06 
UniRef100_B1DCE8 Transcriptional regulator, AraC family n=1 Tax=...    57   1e-06 
UniRef100_A7VQP5 Putative uncharacterized protein n=1 Tax=Clostr...    57   1e-06 
UniRef100_A7JZM2 Transcriptional regulator, AraC family protein ...    57   1e-06 
UniRef100_A6AJI9 Transcriptional regulator n=1 Tax=Vibrio harvey...    57   1e-06 
UniRef100_UPI00016A7EFA transcriptional regulator, AraC family p...    57   2e-06 
UniRef100_UPI00016A75A2 transcriptional regulator, AraC family p...    57   2e-06 
UniRef100_Q87IK0 Putative AraC-type regulatory protein n=1 Tax=V...    57   2e-06 
UniRef100_Q48S54 Two-component response regulator n=1 Tax=Strept...    57   2e-06 
UniRef100_Q182Z9 AraC-family transcriptional regulator n=1 Tax=C...    57   2e-06 
UniRef100_B1MP81 Putative HTH-type transcriptional regulator Ara...    57   2e-06 
UniRef100_A6Q8S4 Transcriptional regulator, AraC family n=1 Tax=...    57   2e-06 
UniRef100_C1DBS2 AraC-type DNA-binding domain-containing protein...    57   2e-06 
UniRef100_C0VPB4 Transcriptional regulator (AraC family) n=1 Tax...    57   2e-06 
UniRef100_B1DAU8 Two component transcriptional regulator, AraC f...    57   2e-06 
UniRef100_A6CZX1 Transcriptional regulator, AraC family protein ...    57   2e-06 
UniRef100_A3EI15 Transcriptional regulator n=2 Tax=Vibrio choler...    57   2e-06 
UniRef100_Q8P029 Putative two-component sensor response regulato...    57   2e-06 
UniRef100_Q8D4F1 AraC-type DNA-binding domain-containing protein...    57   2e-06 
UniRef100_Q7MFY0 AraC-type DNA-binding domain-containing protein...    57   2e-06 
UniRef100_Q5XAV5 Two-component response regulator yesN n=1 Tax=S...    57   2e-06 
UniRef100_Q1JFS4 Two-component response regulator yesN n=1 Tax=S...    57   2e-06 
UniRef100_Q1JAN1 Two-component response regulator yesN n=2 Tax=S...    57   2e-06 
UniRef100_B9LZS6 Transcriptional regulator, AraC family n=1 Tax=...    57   2e-06 
UniRef100_B7I4Z1 Transcriptional regulator, AraC family n=1 Tax=...    57   2e-06 
UniRef100_B5XMF2 Putative two-component sensor response regulato...    57   2e-06 
UniRef100_B2HZ04 AraC-type DNA-binding domain-containing protein...    57   2e-06 
UniRef100_B7H3P9 Bacterial regulatory helix-turn-helix protein, ...    57   2e-06 
UniRef100_A9KQP4 Two component transcriptional regulator, AraC f...    57   2e-06 
UniRef100_A8GG05 Transcriptional regulator, AraC family n=1 Tax=...    57   2e-06 
UniRef100_A8ADL2 Putative uncharacterized protein n=1 Tax=Citrob...    57   2e-06 
UniRef100_Q1J5M2 Two-component response regulator yesN n=3 Tax=S...    57   2e-06 
UniRef100_C2CDN7 Transcriptional regulator AraC family n=2 Tax=V...    57   2e-06 
UniRef100_C0FZV1 Putative uncharacterized protein n=1 Tax=Rosebu...    57   2e-06 
UniRef100_A4IT18 Two-component response regulator n=2 Tax=Geobac...    57   2e-06 
UniRef100_B3KD31 Response regulator receiver n=1 Tax=Geobacillus...    57   2e-06 
UniRef100_B1DB60 Transcriptional regulator, AraC family n=1 Tax=...    57   2e-06 
UniRef100_A7K2J0 AraC-type DNA-binding domain-containing protein...    57   2e-06 
UniRef100_A7K218 Transcriptional regulator, AraC family protein ...    57   2e-06 
UniRef100_A2PNN0 Transcriptional regulator n=1 Tax=Vibrio choler...    57   2e-06 
UniRef100_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 ...    56   3e-06 
UniRef100_UPI00016A5310 transcriptional regulator, AraC family p...    56   3e-06 
UniRef100_Q5LKF5 Transcriptional regulator, AraC family n=1 Tax=...    56   3e-06 
UniRef100_Q0VLF5 Transcriptional regulator, AraC family n=1 Tax=...    56   3e-06 
UniRef100_B5XMX6 Xylose operon regulatory protein n=1 Tax=Klebsi...    56   3e-06 
UniRef100_B4SIX4 Transcriptional regulator, AraC family n=1 Tax=...    56   3e-06 
UniRef100_B1Y1K0 Transcriptional regulator, AraC family n=1 Tax=...    56   3e-06 
UniRef100_A9KK44 Two component transcriptional regulator, AraC f...    56   3e-06 
UniRef100_A6TFI5 Putative regulator of xyl operon n=1 Tax=Klebsi...    56   3e-06 
UniRef100_A3M4W6 Putative transcriptional regulator (AraC family...    56   3e-06 
UniRef100_A1UI14 Transcriptional regulator, AraC family n=3 Tax=...    56   3e-06 
UniRef100_A1TJQ7 Transcriptional regulator, AraC family n=1 Tax=...    56   3e-06 
UniRef100_Q769K0 Urease operon transcriptional activator (Fragme...    56   3e-06 
UniRef100_Q1VXF8 Probable serine/threonine kinase n=1 Tax=Psychr...    56   3e-06 
UniRef100_C2CC64 Transcriptional regulator AraC/XylS family n=1 ...    56   3e-06 
UniRef100_C1DHF9 Transcription activator in PHB biosynthesis, Ar...    56   3e-06 
UniRef100_B8KA71 AraC-type DNA-binding domain-containing protein...    56   3e-06 
UniRef100_B7ASF8 Putative uncharacterized protein n=1 Tax=Bacter...    56   3e-06 
UniRef100_B4AV07 Two component transcriptional regulator, AraC f...    56   3e-06 
UniRef100_B3K9S7 Response regulator receiver n=1 Tax=Geobacillus...    56   3e-06 
UniRef100_B1D6I4 Transcriptional regulator, AraC family n=1 Tax=...    56   3e-06 
UniRef100_A6Y4V5 Transcriptional regulator, AraC/XylS family n=1...    56   3e-06 
UniRef100_A6XYJ4 Transcriptional regulator, AraC/XylS family n=1...    56   3e-06 
UniRef100_A6A9S0 Transcriptional regulator, AraC/XylS family n=2...    56   3e-06 
UniRef100_A2P607 Transcriptional regulator, AraC/XylS family n=1...    56   3e-06 
UniRef100_A0FH45 Putative ARAC-type regulatory protein (Fragment...    56   3e-06 
UniRef100_Q8RCW7 CheY-like receiver domains n=1 Tax=Thermoanaero...    56   4e-06 
UniRef100_Q5P1Q5 Putative transcriptional regulatory protein n=1...    56   4e-06 
UniRef100_A9MGM0 Putative uncharacterized protein n=1 Tax=Salmon...    56   4e-06 
UniRef100_A9KI49 Two component transcriptional regulator, AraC f...    56   4e-06 
UniRef100_A6VED1 Probable transcriptional regulator n=1 Tax=Pseu...    56   4e-06 
UniRef100_A2RDG3 Response regulator protein n=1 Tax=Streptococcu...    56   4e-06 
UniRef100_A1U2D8 Transcriptional regulator, AraC family n=1 Tax=...    56   4e-06 
UniRef100_C0FC99 Putative uncharacterized protein n=1 Tax=Clostr...    56   4e-06 
UniRef100_C0F701 Putative uncharacterized protein n=1 Tax=Neisse...    56   4e-06 
UniRef100_C0D2L4 Putative uncharacterized protein n=1 Tax=Clostr...    56   4e-06 
UniRef100_B7R710 Response regulator receiver domain protein n=1 ...    56   4e-06 
UniRef100_B6AVR7 Probable transcriptional regulator protein, Ara...    56   4e-06 
UniRef100_B3K7P5 Response regulator receiver n=1 Tax=Geobacillus...    56   4e-06 
UniRef100_B1S5Z6 Putative uncharacterized protein n=1 Tax=Bifido...    56   4e-06 
UniRef100_B0NUV9 Sensor protein n=1 Tax=Bacteroides stercoris AT...    56   4e-06 
UniRef100_A9DBV3 Probable transcriptional regulator protein, Ara...    56   4e-06 
UniRef100_A6NST3 Putative uncharacterized protein n=1 Tax=Bacter...    56   4e-06 
UniRef100_Q9I219 Probable transcriptional regulator n=2 Tax=Pseu...    56   4e-06 
UniRef100_A9U6D3 Predicted protein (Fragment) n=1 Tax=Physcomitr...    56   4e-06 
UniRef100_UPI0000F2F656 AraC family transcriptional regulator n=...    55   5e-06 
UniRef100_Q99YQ7 Putative two-component sensor response regulato...    55   5e-06 
UniRef100_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacill...    55   5e-06 
UniRef100_Q48HQ8 Transcriptional regulator, AraC family n=1 Tax=...    55   5e-06 
UniRef100_B7KHJ4 Two component transcriptional regulator, AraC f...    55   5e-06 
UniRef100_B0VLA6 Putative transcriptional regulator (AraC family...    55   5e-06 
UniRef100_B7H0T0 Bacterial regulatory helix-turn-helix protein, ...    55   5e-06 
UniRef100_A7N3N8 Putative uncharacterized protein n=1 Tax=Vibrio...    55   5e-06 
UniRef100_B5Y2Z2 Transcriptional regulator, AraC family n=2 Tax=...    55   5e-06 
UniRef100_A6LR84 Transcriptional regulator, AraC family n=1 Tax=...    55   5e-06 
UniRef100_A4Y0S8 Transcriptional regulator, AraC family n=1 Tax=...    55   5e-06 
UniRef100_B2I366 AraC-type DNA-binding domain-containing protein...    55   5e-06 
UniRef100_C0EIY2 Putative uncharacterized protein n=1 Tax=Clostr...    55   5e-06 
UniRef100_B7WX43 Transcriptional regulator, AraC family n=1 Tax=...    55   5e-06 
UniRef100_B7BB25 Putative uncharacterized protein n=1 Tax=Paraba...    55   5e-06 
UniRef100_B6FFL2 Putative uncharacterized protein n=1 Tax=Entero...    55   5e-06 
UniRef100_B4AIA3 AraC family transcriptional regulator n=1 Tax=B...    55   5e-06 
UniRef100_B1BZ28 Putative uncharacterized protein n=1 Tax=Clostr...    55   5e-06 
UniRef100_A6AQT8 AraC-type DNA-binding domain-containing protein...    55   5e-06 
UniRef100_A6AB11 Transcriptional regulator n=1 Tax=Vibrio choler...    55   5e-06 
UniRef100_A3GUH8 Putative HTH-type transcriptional regulator Ypd...    55   5e-06 
UniRef100_C3LNC8 Transcriptional regulator n=11 Tax=Vibrio chole...    55   5e-06 
UniRef100_UPI000196C685 hypothetical protein BRYFOR_00581 n=1 Ta...    55   7e-06 
UniRef100_UPI000196C246 hypothetical protein BRYFOR_03597 n=1 Ta...    55   7e-06 
UniRef100_Q6FEV3 Putative transcriptional regulator (AraC family...    55   7e-06 
UniRef100_Q65GX5 Probable transcriptional regulator n=1 Tax=Baci...    55   7e-06 
UniRef100_Q2SEK4 AraC-type DNA-binding domain-containing protein...    55   7e-06 
UniRef100_Q2S8T9 AraC-type DNA-binding domain-containing protein...    55   7e-06 
UniRef100_Q2K1B2 Probable transcriptional regulator protein, Ara...    55   7e-06 
UniRef100_Q0HWH0 Transcriptional regulator, AraC family n=1 Tax=...    55   7e-06 
UniRef100_B8FMW7 Transcriptional regulator, AraC family n=1 Tax=...    55   7e-06 
UniRef100_A9C1E1 Transcriptional regulator, AraC family n=1 Tax=...    55   7e-06 
UniRef100_B3C929 Sensor protein n=1 Tax=Bacteroides intestinalis...    55   7e-06 
UniRef100_B0A945 Putative uncharacterized protein n=1 Tax=Clostr...    55   7e-06 
UniRef100_A0P4C5 Transcriptional regulator, AraC family protein ...    55   7e-06 
UniRef100_UPI0001903173 transcriptional regulator protein n=1 Ta...    55   9e-06 
UniRef100_UPI0001873968 transcriptional regulator, AraC family n...    55   9e-06 
UniRef100_Q8D596 AraC-type DNA-binding domain-containing protein...    55   9e-06 
UniRef100_Q882M0 Transcriptional regulator, AraC family n=1 Tax=...    55   9e-06 
UniRef100_Q7NTA1 Putative uncharacterized protein n=1 Tax=Chromo...    55   9e-06 
UniRef100_B8E2M5 Transcriptional regulator, AraC family n=1 Tax=...    55   9e-06 
UniRef100_B7GJK9 DNA-binding response regulator (Contains REC an...    55   9e-06 
UniRef100_B5ETV0 AraC-type DNA-binding domain-containing protein...    55   9e-06 
UniRef100_B1ZXD9 Transcriptional regulator, AraC family n=1 Tax=...    55   9e-06 
UniRef100_B1KGN7 Transcriptional regulator, AraC family n=1 Tax=...    55   9e-06 
UniRef100_C0YRY4 AraC family transcriptional regulator n=1 Tax=C...    55   9e-06 
UniRef100_C0EAY1 Putative uncharacterized protein n=1 Tax=Clostr...    55   9e-06 
UniRef100_C0BSP6 Putative uncharacterized protein n=1 Tax=Bifido...    55   9e-06 
UniRef100_C0AA65 AraC-type DNA-binding domain-containing protein...    55   9e-06 
UniRef100_B9WVV3 Transcriptional regulator, AraC family n=1 Tax=...    55   9e-06 
UniRef100_B7BW30 Putative uncharacterized protein n=1 Tax=Rosebu...    55   9e-06 
UniRef100_B6XUC7 Putative uncharacterized protein n=1 Tax=Bifido...    55   9e-06 
UniRef100_B3KF21 Response regulator receiver n=1 Tax=Geobacillus...    55   9e-06 
UniRef100_A8SZN5 Transcriptional regulator n=1 Tax=Vibrio campbe...    55   9e-06 
UniRef100_A6AX70 Transcriptional regulator n=2 Tax=Vibrio paraha...    55   9e-06 
UniRef100_A3EJH4 Transcriptional regulator, AraC/XylS family n=1...    55   9e-06 
UniRef100_A1ZYV4 Transcriptional regulator, putative n=1 Tax=Mic...    55   9e-06 
UniRef100_UPI0001968884 hypothetical protein BACCELL_01185 n=1 T...    54   1e-05 
UniRef100_UPI00005F8D0E COG2207: AraC-type DNA-binding domain-co...    54   1e-05 
UniRef100_Q9KFT3 Methylphosphotriester-DNA alkyltransferase (Ara...    54   1e-05 
UniRef100_Q7MC65 AraC-type DNA-binding domain-containing protein...    54   1e-05 
UniRef100_Q5YRJ4 Putative transcriptional regulator n=1 Tax=Noca...    54   1e-05 
UniRef100_Q5E020 Putative uncharacterized protein n=1 Tax=Vibrio...    54   1e-05 
UniRef100_Q2KAJ2 Probable transcriptional regulator protein n=1 ...    54   1e-05 
UniRef100_A6LVG2 2-isopropylmalate synthase n=1 Tax=Clostridium ...    54   1e-05 
UniRef100_A4XTI6 Transcriptional regulator, AraC family n=1 Tax=...    54   1e-05 
UniRef100_A0M222 Sensor protein n=1 Tax=Gramella forsetii KT0803...    54   1e-05 
UniRef100_A0KMW4 Transcriptional regulator, AraC/XylS family n=1...    54   1e-05 
UniRef100_Q8KRE8 PhaR protein n=1 Tax=Azotobacter sp. FA8 RepID=...    54   1e-05 
UniRef100_Q1YPA3 Transcriptional regulator, AraC family protein ...    54   1e-05 
UniRef100_Q1N1T2 AraC-type DNA-binding domain-containing protein...    54   1e-05 
UniRef100_C2H7P8 Response regulator n=1 Tax=Enterococcus faecium...    54   1e-05 
UniRef100_C0V0Z5 DNA-binding domain-containing protein, AraC-typ...    54   1e-05 
UniRef100_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostr...    54   1e-05 
UniRef100_C0D1A3 Putative uncharacterized protein n=1 Tax=Clostr...    54   1e-05 
UniRef100_C0ACQ1 AraC/XylS family transcriptional regulator n=1 ...    54   1e-05 
UniRef100_B8KT68 Transcriptional regulator, AraC family n=1 Tax=...    54   1e-05 
UniRef100_B7S1T1 Transcriptional regulator, AraC family n=1 Tax=...    54   1e-05 
UniRef100_B5JU19 Transcriptional regulator, AraC family n=1 Tax=...    54   1e-05 
UniRef100_B4WXJ1 Transcriptional regulator, AraC family protein ...    54   1e-05 
UniRef100_B3K6X6 Helix-turn-helix-domain containing protein AraC...    54   1e-05 
UniRef100_B1DGN1 Two component transcriptional regulator, AraC f...    54   1e-05 
UniRef100_B1D5X3 Two component transcriptional regulator, AraC f...    54   1e-05 
UniRef100_A6F6Z7 Probable transcriptional regulator n=1 Tax=Mori...    54   1e-05 
UniRef100_A5KJJ5 Putative uncharacterized protein n=1 Tax=Rumino...    54   1e-05 
UniRef100_A3JTJ8 Probable transcriptional regulator protein, Ara...    54   1e-05 
UniRef100_Q8XYE5 Probable transcription regulator protein n=1 Ta...    54   2e-05 
UniRef100_Q6FB58 Putative transcriptional regulator (AraC family...    54   2e-05 
UniRef100_Q0KB15 Transcriptional regulator, AraC-family n=1 Tax=...    54   2e-05 
UniRef100_B2V1J8 Transcriptional regulatory protein n=1 Tax=Clos...    54   2e-05 
UniRef100_B2HU05 AraC-type DNA-binding domain-containing protein...    54   2e-05 
UniRef100_B2HGN7 Transcriptional regulatory protein (Probably Ar...    54   2e-05 
UniRef100_C2Q564 Transcriptional regulator, AraC n=1 Tax=Bacillu...    54   2e-05 
UniRef100_C1RZV8 Transcriptional regulator, AraC family n=1 Tax=...    54   2e-05 
UniRef100_C0ZD41 Probable transcriptional regulator n=1 Tax=Brev...    54   2e-05 
UniRef100_C0VHY9 AraC-type DNA-binding domain-containing protein...    54   2e-05 
UniRef100_C0D691 Putative uncharacterized protein n=1 Tax=Clostr...    54   2e-05 
UniRef100_B8KKU1 Transcriptional regulator OruR n=1 Tax=gamma pr...    54   2e-05 
UniRef100_B7BZQ3 Putative uncharacterized protein n=1 Tax=Rosebu...    54   2e-05 
UniRef100_B7AEL4 Putative uncharacterized protein n=1 Tax=Bacter...    54   2e-05 
UniRef100_B3CG99 Sensor protein n=1 Tax=Bacteroides intestinalis...    54   2e-05 
UniRef100_B3C918 Sensor protein n=1 Tax=Bacteroides intestinalis...    54   2e-05 
UniRef100_B2PWL3 Putative uncharacterized protein n=1 Tax=Provid...    54   2e-05 
UniRef100_B0NYF7 Putative uncharacterized protein n=1 Tax=Clostr...    54   2e-05 
UniRef100_B0IRI8 Helix-turn-helix-domain containing protein AraC...    54   2e-05 
UniRef100_A8T030 Putative uncharacterized protein n=1 Tax=Vibrio...    54   2e-05 
UniRef100_A6NS86 Putative uncharacterized protein n=1 Tax=Bacter...    54   2e-05 
UniRef100_A4C5F8 Transcriptional regulator, AraC family protein ...    54   2e-05 
UniRef100_A3WY00 Transcriptional regulator, AraC family protein ...    54   2e-05 
UniRef100_A2WHZ8 AraC-type DNA-binding domain-containing protein...    54   2e-05 
UniRef100_A1ZQH8 Transcriptional regulator, AraC family protein ...    54   2e-05 
UniRef100_UPI0001977898 two component transcriptional regulator,...    54   2e-05 
UniRef100_UPI000185D1D6 putative DNA-binding response regulator/...    54   2e-05 
UniRef100_Q0HK68 Transcriptional regulator, AraC family n=1 Tax=...    54   2e-05 
UniRef100_B6EQP4 HTH-type transcriptional regulator, AraC family...    54   2e-05 
UniRef100_B2TMN8 Transcriptional regulatory protein n=1 Tax=Clos...    54   2e-05 
UniRef100_B2JT57 Transcriptional regulator, AraC family n=1 Tax=...    54   2e-05 
UniRef100_B1Y138 Transcriptional regulator, AraC family n=1 Tax=...    54   2e-05 
UniRef100_B0K339 Response regulator receiver protein n=1 Tax=The...    54   2e-05 
UniRef100_A9KJ06 Two component transcriptional regulator, AraC f...    54   2e-05 
UniRef100_A9G936 Transcriptional regulator, AraC family n=1 Tax=...    54   2e-05 
UniRef100_A7MNI1 Putative uncharacterized protein n=1 Tax=Cronob...    54   2e-05 
UniRef100_A7GC92 Transcriptional regulator, AraC family n=4 Tax=...    54   2e-05 
UniRef100_A4W562 Transcriptional regulator, AraC family n=1 Tax=...    54   2e-05 
UniRef100_A3NFJ7 Transcriptional regulator, AraC family n=1 Tax=...    54   2e-05 
UniRef100_A1TVA8 Transcriptional regulator, AraC family n=1 Tax=...    54   2e-05 
UniRef100_A1B2P0 Transcriptional regulator, AraC family with ami...    54   2e-05 
UniRef100_Q1ZU86 Putative CFA/I fimbrial subunit D n=1 Tax=Vibri...    54   2e-05 
UniRef100_C3WDI9 Two component transcriptional regulator n=1 Tax...    54   2e-05 
UniRef100_C1QHV1 Monosaccharide ABC transporter substrate-bindin...    54   2e-05 
UniRef100_C1PR73 DNA-binding domain-containing protein, AraC-typ...    54   2e-05 
UniRef100_B7XYB4 Putative uncharacterized protein n=1 Tax=Blauti...    54   2e-05 
UniRef100_B7DSF7 Transcriptional regulator, AraC family n=1 Tax=...    54   2e-05 
UniRef100_B7CTA3 Transcriptional regulator, AraC family n=1 Tax=...    54   2e-05 
UniRef100_B7AMQ1 Sensor protein n=1 Tax=Bacteroides eggerthii DS...    54   2e-05 
UniRef100_B7ACW6 Sensor protein n=1 Tax=Bacteroides eggerthii DS...    54   2e-05 
UniRef100_B4X435 Transcriptional regulator, AraC family protein ...    54   2e-05 
UniRef100_B3KF65 Response regulator receiver n=1 Tax=Geobacillus...    54   2e-05 
UniRef100_B3KBE2 Helix-turn-helix-domain containing protein AraC...    54   2e-05 
UniRef100_B1EN70 Transcriptional regulator, AraC family n=1 Tax=...    54   2e-05 
UniRef100_B1DM66 Two component transcriptional regulator, AraC f...    54   2e-05 
UniRef100_B1D604 Transcriptional regulator, AraC family n=1 Tax=...    54   2e-05 
UniRef100_A7LR14 Sensor protein n=1 Tax=Bacteroides ovatus ATCC ...    54   2e-05 
UniRef100_A6EV09 Transcriptional regulator, AraC family protein ...    54   2e-05 
UniRef100_A4APJ2 Probable serine/threonine kinase n=1 Tax=Flavob...    54   2e-05 
UniRef100_A1HMP5 Two component transcriptional regulator, AraC f...    54   2e-05 
UniRef100_P77634 Uncharacterized HTH-type transcriptional regula...    54   2e-05 
UniRef100_UPI0001969121 hypothetical protein BACCELL_02204 n=1 T...    53   3e-05 
UniRef100_UPI00005F770B COG2207: AraC-type DNA-binding domain-co...    53   3e-05 
UniRef100_Q8AB44 Sensor protein n=1 Tax=Bacteroides thetaiotaomi...    53   3e-05 
UniRef100_Q87FT6 Putative uncharacterized protein VPA1592 n=1 Ta...    53   3e-05 
UniRef100_Q5DYZ5 Transcriptional regulatory protein, AraC-like p...    53   3e-05 
UniRef100_Q3KCK3 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_Q0K404 Formamidase fused to an AraC-type HTH DNA-bindi...    53   3e-05 
UniRef100_B6A2G6 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_B2VIR9 AraC family transcriptional regulator n=1 Tax=E...    53   3e-05 
UniRef100_B1KIM8 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_A6VTM5 Helix-turn-helix-domain containing protein AraC...    53   3e-05 
UniRef100_A6LHL2 Sensor protein n=1 Tax=Parabacteroides distason...    53   3e-05 
UniRef100_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clo...    53   3e-05 
UniRef100_A4XMF1 Two component transcriptional regulator, AraC f...    53   3e-05 
UniRef100_A4W2Y8 AraC-type DNA-binding domain-containing protein...    53   3e-05 
UniRef100_A4VWN7 AraC-type DNA-binding domain-containing protein...    53   3e-05 
UniRef100_A0KVE6 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_Q3Y3H1 Helix-turn-helix, AraC type:Response regulator ...    53   3e-05 
UniRef100_C1YY21 Signal transduction histidine kinase, COG0642 n...    53   3e-05 
UniRef100_C1I3S6 Transcriptional regulatory protein n=1 Tax=Clos...    53   3e-05 
UniRef100_C0N2M9 Transcriptional regulator, AraC family protein ...    53   3e-05 
UniRef100_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebu...    53   3e-05 
UniRef100_B7C2L4 Putative uncharacterized protein n=1 Tax=Rosebu...    53   3e-05 
UniRef100_B7ALJ8 Sensor protein n=1 Tax=Bacteroides eggerthii DS...    53   3e-05 
UniRef100_B6RAA0 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_B1DD41 Two component transcriptional regulator, AraC f...    53   3e-05 
UniRef100_B1C0X8 Putative uncharacterized protein n=1 Tax=Clostr...    53   3e-05 
UniRef100_A8UNP8 Sensor protein n=1 Tax=Flavobacteriales bacteri...    53   3e-05 
UniRef100_A6P2R8 Putative uncharacterized protein n=1 Tax=Bacter...    53   3e-05 
UniRef100_A6BB96 Transcriptional regulator, AraC family protein ...    53   3e-05 
UniRef100_A5KX98 Putative uncharacterized protein n=1 Tax=Vibrio...    53   3e-05 
UniRef100_A9U8F0 Predicted protein (Fragment) n=1 Tax=Physcomitr...    53   3e-05 
UniRef100_Q5QTS9 Predicted regulatory protein containing AraC-ty...    53   3e-05 
UniRef100_Q5E051 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_Q3JI70 AraC family regulatory protein n=1 Tax=Burkhold...    53   3e-05 
UniRef100_Q2SDE2 AraC-type DNA-binding domain-containing protein...    53   3e-05 
UniRef100_Q2G532 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_Q02UB1 Putative transcriptional regulator n=1 Tax=Pseu...    53   3e-05 
UniRef100_B8ZKC3 Response regulator protein n=1 Tax=Streptococcu...    53   3e-05 
UniRef100_B7LTI0 DNA-binding transcriptional activator, xylose-b...    53   3e-05 
UniRef100_B5YFJ6 Transcriptional regulator, putative n=1 Tax=Dic...    53   3e-05 
UniRef100_B4SQ42 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_B2FIC6 Putative helix-turn-helix transcriptional regul...    53   3e-05 
UniRef100_B1Z0I4 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_B1LMI0 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_B1KYQ5 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_A8AZ20 DNA-binding response regulator n=1 Tax=Streptoc...    53   3e-05 
UniRef100_A5I0N6 AraC-family transcriptional regulator n=2 Tax=C...    53   3e-05 
UniRef100_A4XMI3 Two component transcriptional regulator, AraC f...    53   3e-05 
UniRef100_A3DGG6 Two component transcriptional regulator, AraC f...    53   3e-05 
UniRef100_Q1ZIY4 Putative transcriptional regulator n=1 Tax=Psyc...    53   3e-05 
UniRef100_Q1VFW3 Putative uncharacterized protein n=1 Tax=Vibrio...    53   3e-05 
UniRef100_C3L3B6 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_C2BAQ0 Putative uncharacterized protein n=1 Tax=Citrob...    53   3e-05 
UniRef100_C0FKA6 Putative uncharacterized protein n=1 Tax=Clostr...    53   3e-05 
UniRef100_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostr...    53   3e-05 
UniRef100_B9AQC1 Sensor protein n=1 Tax=Prevotella copri DSM 182...    53   3e-05 
UniRef100_B8L319 Transcriptional regulator n=1 Tax=Stenotrophomo...    53   3e-05 
UniRef100_B6FC41 Putative uncharacterized protein n=1 Tax=Entero...    53   3e-05 
UniRef100_B5JUK1 AraC-type DNA-binding domain-containing protein...    53   3e-05 
UniRef100_B4X108 Transcriptional regulator, AraC family protein ...    53   3e-05 
UniRef100_B4WWP7 Transcriptional regulator, AraC family protein ...    53   3e-05 
UniRef100_B4BC24 Two component transcriptional regulator, AraC f...    53   3e-05 
UniRef100_B1QKE3 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_B1DAV0 Transcriptional regulator, AraC family n=1 Tax=...    53   3e-05 
UniRef100_B1DAK3 Two component transcriptional regulator, AraC f...    53   3e-05 
UniRef100_A8RB25 Putative uncharacterized protein n=1 Tax=Eubact...    53   3e-05 
UniRef100_A8EJU9 Transcriptional regulator, AraC family n=3 Tax=...    53   3e-05 
UniRef100_A7JXD1 AraC-type DNA-binding domain-containing protein...    53   3e-05 
UniRef100_A4TQM6 Transcriptional regulator, AraC family n=13 Tax...    53   3e-05 
UniRef100_A6B787 Transcriptional regulator, AraC family protein ...    53   3e-05 
UniRef100_A5L990 DNA-binding response regulator n=1 Tax=Streptoc...    53   3e-05 
UniRef100_B7V2L8 Probable transcriptional regulator n=3 Tax=Pseu...    53   3e-05 
UniRef100_A3L0C2 Putative uncharacterized protein n=1 Tax=Pseudo...    53   3e-05 
UniRef100_UPI00017947D1 hypothetical protein CLOSPO_01772 n=1 Ta...    52   4e-05 
UniRef100_Q89NH4 Transcriptional regulatory protein n=1 Tax=Brad...    52   4e-05 
UniRef100_Q66F00 Putative transcriptional regulator n=1 Tax=Yers...    52   4e-05 
UniRef100_Q5LGF3 Putative AraC-family transcriptional regulator ...    52   4e-05 
UniRef100_Q481H7 Transcriptional regulator, AraC family n=1 Tax=...    52   4e-05 
UniRef100_Q393B9 Transcriptional regulator, AraC family n=1 Tax=...    52   4e-05 
UniRef100_Q391T4 Transcriptional regulator, AraC family n=1 Tax=...    52   4e-05 
UniRef100_Q1M7K5 Putative AraC family transcription factor n=1 T...    52   4e-05 
UniRef100_Q1BLM4 Transcriptional regulator, AraC family n=1 Tax=...    52   4e-05 
UniRef100_Q12CS5 Transcriptional regulator, AraC family n=1 Tax=...    52   4e-05 
UniRef100_B7LVD7 DNA-binding transcriptional activator, L-rhamno...    52   4e-05 
UniRef100_B6ERS4 HTH-type regulatory protein, AraC family n=1 Ta...    52   4e-05 
UniRef100_B4RXH5 Putative transcriptional regulator n=1 Tax=Alte...    52   4e-05 
UniRef100_B2ICW5 Transcriptional regulator, AraC family n=1 Tax=...    52   4e-05 
UniRef100_B1K4Y8 Transcriptional regulator, AraC family n=1 Tax=...    52   4e-05 
UniRef100_A9KRK4 Transcriptional regulator, AraC family n=1 Tax=...    52   4e-05 
UniRef100_A9GN71 Tra n=1 Tax=Sorangium cellulosum 'So ce 56' Rep...    52   4e-05 
UniRef100_A1A117 Transcriptional regulator, AraC family n=1 Tax=...    52   4e-05 
UniRef100_A0AYM4 Transcriptional regulator, AraC family n=1 Tax=...    52   4e-05 
UniRef100_Q1ZRJ4 Putative transcriptional regulator n=1 Tax=Vibr...    52   4e-05 
UniRef100_Q1VD75 Putative transcription regulator n=1 Tax=Vibrio...    52   4e-05 
UniRef100_C3K2A2 Putative putative AraC-family regulatory protei...    52   4e-05 
UniRef100_C2DUX1 Transcriptional regulator YpdC n=3 Tax=Escheric...    52   4e-05 
UniRef100_C2A3A6 DNA-binding domain-containing protein, AraC-typ...    52   4e-05 
UniRef100_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostr...    52   4e-05 
UniRef100_C0B5R1 Putative uncharacterized protein n=1 Tax=Coproc...    52   4e-05 
UniRef100_B9YAG7 Putative uncharacterized protein n=1 Tax=Holdem...    52   4e-05 
UniRef100_B6FS23 Putative uncharacterized protein n=1 Tax=Clostr...    52   4e-05 
UniRef100_B6F7Q0 Putative uncharacterized protein n=1 Tax=Entero...    52   4e-05 
UniRef100_B6BG36 Transcriptional Regulator, AraC family, putativ...    52   4e-05 
UniRef100_B5JY44 Transcriptional regulator, AraC family, putativ...    52   4e-05 
UniRef100_B3KC06 Response regulator receiver n=1 Tax=Geobacillus...    52   4e-05 
UniRef100_B3K406 Response regulator receiver n=1 Tax=Geobacillus...    52   4e-05 
UniRef100_B3HWY6 Transcriptional regulator, AraC family n=2 Tax=...    52   4e-05 
UniRef100_B3CES7 Sensor protein n=1 Tax=Bacteroides intestinalis...    52   4e-05 
UniRef100_B1QZD7 Transcriptional regulator n=1 Tax=Clostridium b...    52   4e-05 
UniRef100_B1EJA6 Transcriptional regulator, AraC family n=1 Tax=...    52   4e-05 
UniRef100_B1D8T6 Two component transcriptional regulator, AraC f...    52   4e-05 
UniRef100_B0NUN0 Sensor protein n=1 Tax=Bacteroides stercoris AT...    52   4e-05 
UniRef100_A7A566 Putative uncharacterized protein n=1 Tax=Bifido...    52   4e-05 
UniRef100_A6D9E4 AraC-type DNA-binding domain-containing protein...    52   4e-05 
UniRef100_A6CLV0 AraC-type DNA-binding domain-containing protein...    52   4e-05 
UniRef100_A6BB61 Transcriptional regulator, AraC family protein ...    52   4e-05 
UniRef100_A3I6D9 Putative uncharacterized protein n=1 Tax=Bacill...    52   4e-05 
UniRef100_A9U7M3 Predicted protein n=1 Tax=Physcomitrella patens...    52   4e-05 
UniRef100_Q8ED38 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_Q87J49 Transcriptional regulator, AraC/XylS family n=1...    52   6e-05 
UniRef100_Q6CYY0 AraC family transcriptional regulator n=1 Tax=P...    52   6e-05 
UniRef100_Q65NG7 Putative uncharacterized protein n=1 Tax=Bacill...    52   6e-05 
UniRef100_Q5DZL8 Predicted DNA-binding transcriptional regulator...    52   6e-05 
UniRef100_Q397S2 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_Q2K081 Probable transcriptional regulator protein, Ara...    52   6e-05 
UniRef100_Q1M6E5 Putative AraC family transcriptional regulator ...    52   6e-05 
UniRef100_Q0B484 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_Q02J75 Putative transcriptional regulator n=1 Tax=Pseu...    52   6e-05 
UniRef100_Q02E38 Putative transcriptional regulator n=1 Tax=Pseu...    52   6e-05 
UniRef100_B9JX81 Transcriptional regulator AraC family n=1 Tax=A...    52   6e-05 
UniRef100_B9JNI2 Transcriptional regulator protein n=1 Tax=Agrob...    52   6e-05 
UniRef100_B8I1I4 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_B8FYL7 Transcriptional regulator, AraC family n=2 Tax=...    52   6e-05 
UniRef100_B7UG92 Predicted DNA-binding protein n=1 Tax=Escherich...    52   6e-05 
UniRef100_B7N5Y3 Putative DNA-binding protein n=1 Tax=Escherichi...    52   6e-05 
UniRef100_B7LL94 Putative DNA-binding protein n=1 Tax=Escherichi...    52   6e-05 
UniRef100_B7KU90 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_B5XY24 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_B5EUH7 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_B4EMK0 AraC family regulatory protein n=1 Tax=Burkhold...    52   6e-05 
UniRef100_B3Q185 Probable transcriptional regulator protein, Ara...    52   6e-05 
UniRef100_B0K3C5 Response regulator receiver protein n=1 Tax=The...    52   6e-05 
UniRef100_B0K234 Response regulator receiver protein n=1 Tax=The...    52   6e-05 
UniRef100_A9GXS9 Ornithine utilization regulator n=1 Tax=Sorangi...    52   6e-05 
UniRef100_A9AP59 Transcriptional regulator, AraC family n=2 Tax=...    52   6e-05 
UniRef100_A7MK74 Putative uncharacterized protein n=1 Tax=Cronob...    52   6e-05 
UniRef100_A4Z0B3 Putative Transcriptional regulator, AraC/XylS f...    52   6e-05 
UniRef100_A4XSU8 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_A1B905 Transcriptional regulator, AraC family with ami...    52   6e-05 
UniRef100_A0LXD2 Sensor protein n=1 Tax=Gramella forsetii KT0803...    52   6e-05 
UniRef100_Q1ZB33 Transcriptional regulatory, AraC-like n=1 Tax=P...    52   6e-05 
UniRef100_C3RI89 Putative uncharacterized protein n=1 Tax=Mollic...    52   6e-05 
UniRef100_C3QA40 Putative uncharacterized protein n=1 Tax=Bacter...    52   6e-05 
UniRef100_C2JQP4 Response regulator n=2 Tax=Enterococcus faecali...    52   6e-05 
UniRef100_C2H3H7 Response regulator n=1 Tax=Enterococcus faecali...    52   6e-05 
UniRef100_C1Z0T9 Fused histidine kinase/response regulator n=1 T...    52   6e-05 
UniRef100_C0X9S1 Response regulator n=1 Tax=Enterococcus faecali...    52   6e-05 
UniRef100_C0VNX7 AraC family transcriptional regulator n=1 Tax=A...    52   6e-05 
UniRef100_C0CH60 Putative uncharacterized protein n=1 Tax=Blauti...    52   6e-05 
UniRef100_B9P4M9 Response regulator receiver n=1 Tax=Thermoanaer...    52   6e-05 
UniRef100_B9D8U0 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_B9BKI1 Transcriptional regulator, AraC family n=2 Tax=...    52   6e-05 
UniRef100_B9B254 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_B8KVL0 Helix-turn-helix-domain containing protein, Ara...    52   6e-05 
UniRef100_B8KKT6 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_B7B4U3 Putative uncharacterized protein n=1 Tax=Paraba...    52   6e-05 
UniRef100_B4X0T9 Transcriptional regulator, AraC family protein ...    52   6e-05 
UniRef100_B3X0E8 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_B3KH17 Response regulator receiver n=1 Tax=Geobacillus...    52   6e-05 
UniRef100_B3K851 Helix-turn-helix-domain containing protein AraC...    52   6e-05 
UniRef100_A7ZPJ2 Transcriptional regulator, AraC family n=12 Tax...    52   6e-05 
UniRef100_B5YYY2 Transcriptional regulator, AraC family n=12 Tax...    52   6e-05 
UniRef100_B1TD02 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_B1FAL3 Transcriptional regulator, AraC family n=1 Tax=...    52   6e-05 
UniRef100_A6GTF7 Putative transcriptional regulator n=1 Tax=Limn...    52   6e-05 
UniRef100_A4EM75 Transcriptional regulator, AraC family protein ...    52   6e-05 
UniRef100_A4BF96 Arabinose operon regulatory protein n=1 Tax=Rei...    52   6e-05 
UniRef100_A3YC06 Transcriptional regulator, AraC family protein ...    52   6e-05 
UniRef100_B7V5L5 Probable transcriptional regulator n=4 Tax=Pseu...    52   6e-05 
UniRef100_A3K7B6 Putative uncharacterized protein n=1 Tax=Sagitt...    52   6e-05 
UniRef100_A2W097 Helix-turn-helix protein n=1 Tax=Burkholderia c...    52   6e-05 
UniRef100_A1ZGA7 Sensor protein n=1 Tax=Microscilla marina ATCC ...    52   6e-05 
UniRef100_A0Z5W4 Transcriptional Regulator, AraC family protein ...    52   6e-05 
UniRef100_P77396 Uncharacterized HTH-type transcriptional regula...    52   6e-05 
UniRef100_UPI0001A42942 xylose operon regulatory protein n=1 Tax...    52   7e-05 
UniRef100_UPI000197695D helix-turn-helix domain-containing prote...    52   7e-05 
UniRef100_UPI0001969322 hypothetical protein BACCELL_03420 n=1 T...    52   7e-05 
UniRef100_UPI000055870E COG2207: AraC-type DNA-binding domain-co...    52   7e-05 
UniRef100_Q9RIP5 DNA-binding response regulator n=1 Tax=Streptoc...    52   7e-05 
UniRef100_Q88S04 Transcription regulator n=1 Tax=Lactobacillus p...    52   7e-05 
UniRef100_Q488K9 Sensor protein n=1 Tax=Colwellia psychrerythrae...    52   7e-05 
UniRef100_Q3Z0Q4 Putative ARAC-type regulatory protein n=1 Tax=S...    52   7e-05 
UniRef100_Q1MJ75 Putative AraC family transcriptional regulator ...    52   7e-05 
UniRef100_Q0T3J4 Putative ARAC-type regulatory protein n=1 Tax=S...    52   7e-05 
UniRef100_Q0JZP6 Transcriptional regulator, AraC-family n=1 Tax=...    52   7e-05 
UniRef100_Q0B1U8 Transcriptional regulator, AraC family n=1 Tax=...    52   7e-05 
UniRef100_B9JGF3 Transcriptional regulator protein n=1 Tax=Agrob...    52   7e-05 
UniRef100_B8I0N2 Two component transcriptional regulator, AraC f...    52   7e-05 
UniRef100_B7VSM5 Putative transcriptional regulator, AraC/XylS f...    52   7e-05 
UniRef100_B7MWC3 Putative DNA-binding transcriptional regulator;...    52   7e-05 
UniRef100_B6ESF8 Putative HTH-type regulatory protein, AraC fami...    52   7e-05 
UniRef100_B5E6B8 Response regulator TCS07 n=1 Tax=Streptococcus ...    52   7e-05 
UniRef100_B2TWY1 Transcriptional regulator, AraC family n=1 Tax=...    52   7e-05 
UniRef100_B1Z404 Transcriptional regulator, AraC family n=1 Tax=...    52   7e-05 
UniRef100_B1MLH4 Probable transcriptional regulator, AraC family...    52   7e-05 
UniRef100_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=...    52   7e-05 
UniRef100_A8MJF7 Two component transcriptional regulator, AraC f...    52   7e-05 
UniRef100_A8A1D6 Putative transcriptional regulator, AraC family...    52   7e-05 
UniRef100_A6VSA8 Transcriptional regulator, AraC family n=1 Tax=...    52   7e-05 
UniRef100_A6KZH7 Sensor protein n=1 Tax=Bacteroides vulgatus ATC...    52   7e-05 
UniRef100_A4W650 Helix-turn-helix-domain containing protein, Ara...    52   7e-05 
UniRef100_A3N845 Transcriptional regulator, AraC family n=1 Tax=...    52   7e-05 
UniRef100_Q2BCI8 Putative uncharacterized protein n=1 Tax=Bacill...    52   7e-05 
UniRef100_Q1N625 AraC-type DNA-binding domain-containing protein...    52   7e-05 
UniRef100_Q1N423 Transcriptional regulator, AraC family protein ...    52   7e-05 
UniRef100_C3RE13 Two-component system sensor histidine kinase/re...    52   7e-05 
UniRef100_C3RDR4 Two-component system response regulator n=1 Tax...    52   7e-05 
UniRef100_C3R1C5 Two-component system sensor histidine kinase/re...    52   7e-05 
UniRef100_C3Q4W4 Two-component system sensor histidine kinase/re...    52   7e-05 
UniRef100_C3Q4B0 Two-component system response regulator n=1 Tax...    52   7e-05 
UniRef100_C3H2V1 Transcriptional regulator, AraC n=1 Tax=Bacillu...    52   7e-05 
UniRef100_C2XTJ4 Transcriptional regulator, AraC n=1 Tax=Bacillu...    52   7e-05 
UniRef100_C2L0L9 Response regulator receiver protein n=1 Tax=Ori...    52   7e-05 
UniRef100_C2FRA6 AraC family transcriptional regulator n=2 Tax=L...    52   7e-05 
UniRef100_C2FQ73 Transcription regulator n=1 Tax=Lactobacillus p...    52   7e-05 
UniRef100_C2B7G0 Putative uncharacterized protein n=1 Tax=Citrob...    52   7e-05 
UniRef100_C1WQN5 Response regulator containing CheY-like receive...    52   7e-05 
UniRef100_C1Q427 DNA-binding domain-containing protein, AraC-typ...    52   7e-05 
UniRef100_C1CP35 Response regulator n=1 Tax=Streptococcus pneumo...    52   7e-05 
UniRef100_C1CI62 Response regulator n=3 Tax=Streptococcus pneumo...    52   7e-05 
UniRef100_C1CAH7 DNA-binding response regulator n=1 Tax=Streptoc...    52   7e-05 
UniRef100_C1A7J5 AraC family transcriptional regulator n=1 Tax=G...    52   7e-05 
UniRef100_C0TZD8 DNA-binding domain-containing protein, AraC-typ...    52   7e-05 
UniRef100_C0DCC8 Putative uncharacterized protein n=1 Tax=Neisse...    52   7e-05 
UniRef100_C0D3A6 Putative uncharacterized protein n=1 Tax=Clostr...    52   7e-05 
UniRef100_B8KPR3 Helix-turn-helix-domain containing protein, Ara...    52   7e-05 
UniRef100_B7AXB0 Putative uncharacterized protein n=1 Tax=Mitsuo...    52   7e-05 
UniRef100_B6VXH1 Sensor protein n=1 Tax=Bacteroides dorei DSM 17...    52   7e-05 
UniRef100_B5CYP4 Putative uncharacterized protein n=1 Tax=Bacter...    52   7e-05 
UniRef100_B4AGY7 Response regulator n=1 Tax=Bacillus pumilus ATC...    52   7e-05 
UniRef100_B3XJ35 Transcriptional regulator, AraC family n=3 Tax=...    52   7e-05 
UniRef100_B2DZQ8 Response regulator n=1 Tax=Streptococcus pneumo...    52   7e-05 
UniRef100_B2DHD6 Response regulator n=1 Tax=Streptococcus pneumo...    52   7e-05 
UniRef100_B1SZR3 Transcriptional regulator, AraC family n=1 Tax=...    52   7e-05 
UniRef100_B1F8U8 Transcriptional regulator, AraC family n=1 Tax=...    52   7e-05 
UniRef100_B1DBI2 Two component transcriptional regulator, AraC f...    52   7e-05 
UniRef100_B0JB53 AraC protein arabinose-binding/dimerisation n=1...    52   7e-05 
UniRef100_A8R814 Putative uncharacterized protein n=1 Tax=Eubact...    52   7e-05 
UniRef100_A7LRR5 Sensor protein n=1 Tax=Bacteroides ovatus ATCC ...    52   7e-05 
UniRef100_A5ZID7 Sensor protein n=1 Tax=Bacteroides caccae ATCC ...    52   7e-05 
UniRef100_A1V312 Transcriptional regulator, AraC family n=9 Tax=...    52   7e-05 
UniRef100_C1CBX2 Response regulator n=6 Tax=Streptococcus pneumo...    52   7e-05 
UniRef100_A5LYB0 DNA-binding response regulator n=3 Tax=Streptoc...    52   7e-05 
UniRef100_A5LST9 DNA-binding response regulator n=3 Tax=Streptoc...    52   7e-05 
UniRef100_A5LJ67 DNA-binding response regulator n=1 Tax=Streptoc...    52   7e-05 
UniRef100_UPI000197A62E two component transcriptional regulator,...    51   1e-04 
UniRef100_UPI0001968E0B hypothetical protein BACCELL_00777 n=1 T...    51   1e-04 
UniRef100_UPI000190B56E bacterial regulatory protein, AraC famil...    51   1e-04 
UniRef100_UPI00016B0AC0 transcriptional regulator, AraC family p...    51   1e-04 
UniRef100_UPI00005FA48A COG4977: Transcriptional regulator conta...    51   1e-04 
UniRef100_Q9KT29 Transcriptional regulator, AraC/XylS family n=1...    51   1e-04 
UniRef100_Q89LX5 Transcriptional regulatory protein n=1 Tax=Brad...    51   1e-04 
UniRef100_Q885H7 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_Q7MJC9 AraC-type DNA-binding domain-containing protein...    51   1e-04 
UniRef100_Q5WL66 AraC/XylS family transcriptional regulator n=1 ...    51   1e-04 
UniRef100_Q5KUZ3 Two-component response regulator n=1 Tax=Geobac...    51   1e-04 
UniRef100_Q47ZJ7 Transcriptional regulator, araC family n=1 Tax=...    51   1e-04 
UniRef100_Q3IFS9 Putative transcriptional regulator, AraC family...    51   1e-04 
UniRef100_Q187N6 AraC-family transcriptional regulator (Fragment...    51   1e-04 
UniRef100_Q15XP2 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_B5ZW52 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_B5EV79 Helix-turn-helix-domain containing protein AraC...    51   1e-04 
UniRef100_B1JA93 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_B1J8M3 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_A6VDF3 Probable transcriptional regulator n=1 Tax=Pseu...    51   1e-04 
UniRef100_A6LHB1 Sensor protein n=1 Tax=Parabacteroides distason...    51   1e-04 
UniRef100_A5FC73 Sensor protein n=1 Tax=Flavobacterium johnsonia...    51   1e-04 
UniRef100_A4VLS2 Transcriptional regulator n=1 Tax=Pseudomonas s...    51   1e-04 
UniRef100_A4JQM2 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_A3NTV5 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_A1JSS0 Putative AraC-family transcriptional regulatory...    51   1e-04 
UniRef100_Q9K2K0 Putative transcriptional regulator n=1 Tax=Baci...    51   1e-04 
UniRef100_Q1N4U0 Probable transcriptional regulator n=1 Tax=Berm...    51   1e-04 
UniRef100_C3QR78 Two-component system sensor histidine kinase/re...    51   1e-04 
UniRef100_C2D366 Putative uncharacterized protein n=1 Tax=Lactob...    51   1e-04 
UniRef100_C1HNN8 Transcriptional regulator YpdC n=4 Tax=Escheric...    51   1e-04 
UniRef100_C0VQ04 AraC family transcriptional regulator n=1 Tax=A...    51   1e-04 
UniRef100_C0FU22 Putative uncharacterized protein n=1 Tax=Rosebu...    51   1e-04 
UniRef100_C0EDZ9 Putative uncharacterized protein n=1 Tax=Clostr...    51   1e-04 
UniRef100_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostr...    51   1e-04 
UniRef100_C0B7W3 Putative uncharacterized protein n=1 Tax=Coproc...    51   1e-04 
UniRef100_B7S1L9 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_B7S017 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_B7B3K7 Putative uncharacterized protein n=1 Tax=Mitsuo...    51   1e-04 
UniRef100_B5JP43 Transcriptional regulator, AraC family protein ...    51   1e-04 
UniRef100_B3KHW9 Helix-turn-helix-domain containing protein AraC...    51   1e-04 
UniRef100_B3K540 Response regulator receiver n=1 Tax=Geobacillus...    51   1e-04 
UniRef100_B3JNK9 Sensor protein n=1 Tax=Bacteroides coprocola DS...    51   1e-04 
UniRef100_B3HH04 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_B1D785 Two component transcriptional regulator, AraC f...    51   1e-04 
UniRef100_A8UMH2 Putative regulatory protein, possibly two-compo...    51   1e-04 
UniRef100_A8RI10 Putative uncharacterized protein n=1 Tax=Clostr...    51   1e-04 
UniRef100_A7K2G1 AraC-type DNA-binding domain-containing protein...    51   1e-04 
UniRef100_A7B0Y7 Putative uncharacterized protein n=1 Tax=Rumino...    51   1e-04 
UniRef100_A6B723 Transcriptional regulator, AraC family protein ...    51   1e-04 
UniRef100_A4BYW8 Transcriptional regulator n=1 Tax=Polaribacter ...    51   1e-04 
UniRef100_A3XZF5 Putative transcriptional regulator (AraC family...    51   1e-04 
UniRef100_A3XUY9 Putative transcriptional regulator, AraC/XylS f...    51   1e-04 
UniRef100_A3UN26 Putative transcriptional regulator, AraC/XylS f...    51   1e-04 
UniRef100_A3JSM3 Transcriptional regulator, AraC family protein ...    51   1e-04 
UniRef100_A3JHC0 Transcriptional regulator, AraC family protein ...    51   1e-04 
UniRef100_UPI0001A487B7 transcriptional regulator, AraC family n...    51   1e-04 
UniRef100_UPI0001A4453A xylose operon regulatory protein n=1 Tax...    51   1e-04 
UniRef100_UPI0001979F4A two component transcriptional regulator,...    51   1e-04 
UniRef100_UPI000196CEA1 hypothetical protein BRYFOR_00102 n=1 Ta...    51   1e-04 
UniRef100_UPI0001969479 hypothetical protein BACCELL_00868 n=1 T...    51   1e-04 
UniRef100_UPI0001968902 hypothetical protein BACCELL_03275 n=1 T...    51   1e-04 
UniRef100_UPI0001907EF7 probable transcriptional regulator prote...    51   1e-04 
UniRef100_UPI0001907CB4 probable transcriptional regulator prote...    51   1e-04 
UniRef100_UPI0001902C5E probable transcriptional regulator prote...    51   1e-04 
UniRef100_UPI00016A55C9 transcriptional regulator, AraC family p...    51   1e-04 
UniRef100_UPI0001693CE5 response regulator receiver protein n=1 ...    51   1e-04 
UniRef100_UPI0000F2F5C8 AraC family transcriptional regulator n=...    51   1e-04 
UniRef100_UPI0000DAF1BE hypothetical protein PaerPA_01001710 n=1...    51   1e-04 
UniRef100_Q87J72 Putative transcription regulator n=1 Tax=Vibrio...    51   1e-04 
UniRef100_Q7MD65 Putative uncharacterized protein VVA1171 n=1 Ta...    51   1e-04 
UniRef100_Q6FFM4 Putative transcriptional regulator (AraC family...    51   1e-04 
UniRef100_Q63P78 AraC family regulatory protein n=1 Tax=Burkhold...    51   1e-04 
UniRef100_Q5LS29 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_Q48HG8 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_Q47YL4 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_Q397M3 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_Q1QSF5 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_B6A3U7 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_B1YJP0 Two component transcriptional regulator, AraC f...    51   1e-04 
UniRef100_A3M2M8 Transcriptional Regulator (AraC family) n=4 Tax...    51   1e-04 
UniRef100_A9M0R3 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_A4VG28 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_A3M9M0 EsvA n=1 Tax=Acinetobacter baumannii ATCC 17978...    51   1e-04 
UniRef100_A1IPU2 Putative transcriptional regulator n=1 Tax=Neis...    51   1e-04 
UniRef100_A1B253 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_Q9Z676 Regulatory protein GdhBR n=1 Tax=Pantoea citrea...    51   1e-04 
UniRef100_Q2YHS4 YpdC protein n=2 Tax=Kluyvera ascorbata RepID=Q...    51   1e-04 
UniRef100_Q2C4J2 Transcriptional regulatory, AraC-like n=1 Tax=P...    51   1e-04 
UniRef100_Q2BQ21 Transcriptional regulator, AraC family protein ...    51   1e-04 
UniRef100_Q1VFB6 Transcriptional regulator, AraC/XylS family pro...    51   1e-04 
UniRef100_C3Q9V0 Two-component system sensor histidine kinase/re...    51   1e-04 
UniRef100_C2V4W0 Transcriptional regulator, AraC n=2 Tax=Bacillu...    51   1e-04 
UniRef100_C2FG77 TCS response regulator YesN family protein n=1 ...    51   1e-04 
UniRef100_C2A9K6 DNA-binding domain-containing protein, AraC-typ...    51   1e-04 
UniRef100_C1Z951 Signal transduction histidine kinase, COG0642 (...    51   1e-04 
UniRef100_C1TVE6 Response regulator with CheY-like receiver doma...    51   1e-04 
UniRef100_C0D9A6 Putative uncharacterized protein n=1 Tax=Clostr...    51   1e-04 
UniRef100_C0C1J0 Putative uncharacterized protein n=1 Tax=Clostr...    51   1e-04 
UniRef100_B7BUA1 Putative uncharacterized protein n=1 Tax=Rosebu...    51   1e-04 
UniRef100_B7AHN7 Putative uncharacterized protein n=1 Tax=Bacter...    51   1e-04 
UniRef100_B6XDY8 Putative uncharacterized protein n=1 Tax=Provid...    51   1e-04 
UniRef100_B6WF97 Sensor protein n=1 Tax=Bacteroides finegoldii D...    51   1e-04 
UniRef100_B5CZW2 Sensor protein n=1 Tax=Bacteroides plebeius DSM...    51   1e-04 
UniRef100_B3KCN3 Helix-turn-helix-domain containing protein AraC...    51   1e-04 
UniRef100_B3JPG4 Sensor protein n=1 Tax=Bacteroides coprocola DS...    51   1e-04 
UniRef100_B3CFD8 Putative uncharacterized protein n=1 Tax=Bacter...    51   1e-04 
UniRef100_B3C5K6 Sensor protein n=1 Tax=Bacteroides intestinalis...    51   1e-04 
UniRef100_B1DC98 Two component transcriptional regulator, AraC f...    51   1e-04 
UniRef100_Q1C127 Transcriptional regulator, AraC family n=2 Tax=...    51   1e-04 
UniRef100_A8TQD3 Transcriptional regulator, AraC family protein ...    51   1e-04 
UniRef100_A8SQM8 Putative uncharacterized protein n=1 Tax=Coproc...    51   1e-04 
UniRef100_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostr...    51   1e-04 
UniRef100_A7B8B1 Putative uncharacterized protein n=1 Tax=Rumino...    51   1e-04 
UniRef100_A6NTG1 Putative uncharacterized protein n=1 Tax=Bacter...    51   1e-04 
UniRef100_A6FC17 Putative transcriptional regulator (AraC family...    51   1e-04 
UniRef100_A4LM69 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_A3V653 Transcriptional regulator, AraC family n=1 Tax=...    51   1e-04 
UniRef100_A1ZWA4 Activator protein MtlR n=1 Tax=Microscilla mari...    51   1e-04 
UniRef100_A0Z5W7 AraC-type DNA-binding domain-containing protein...    51   1e-04 
UniRef100_A0P153 Transcriptional regulator, AraC family protein ...    51   1e-04 
UniRef100_Q65Q30 HTH-type transcriptional activator rhaR n=1 Tax...    51   1e-04 
UniRef100_UPI000197BF0A hypothetical protein PROVRETT_04380 n=1 ...    50   2e-04 
UniRef100_UPI000197956A response regulator receiver protein n=1 ...    50   2e-04 
UniRef100_UPI00016AEBEC transcriptional regulator, AraC family p...    50   2e-04 
UniRef100_UPI00016AA3C0 transcriptional regulator, AraC family p...    50   2e-04 
UniRef100_UPI00016A885C transcriptional regulator, AraC family p...    50   2e-04 
UniRef100_UPI00016A74A4 transcriptional regulator, AraC family p...    50   2e-04 
UniRef100_UPI00016A3C3B transcriptional regulator, AraC family p...    50   2e-04 
UniRef100_UPI00005F9D3A COG2207: AraC-type DNA-binding domain-co...    50   2e-04 
UniRef100_UPI00005F8295 COG4936: Predicted sensor domain n=1 Tax...    50   2e-04 
UniRef100_UPI000039AB06 COG1609: Transcriptional regulators n=1 ...    50   2e-04 
UniRef100_Q8PPV4 Transcriptional regulator araC family n=1 Tax=X...    50   2e-04 
UniRef100_Q8A4H1 Sensor protein n=1 Tax=Bacteroides thetaiotaomi...    50   2e-04 
UniRef100_Q8A084 Sensor protein n=1 Tax=Bacteroides thetaiotaomi...    50   2e-04 
UniRef100_Q6DB01 Xylose operon regulatory protein n=1 Tax=Pectob...    50   2e-04 
UniRef100_Q6D4U5 AraC-family transcriptional regulator n=1 Tax=P...    50   2e-04 
UniRef100_Q63V93 Putative AraC-family transcriptional regulator ...    50   2e-04 
UniRef100_Q3YTT9 Putative uncharacterized protein n=1 Tax=Shigel...    50   2e-04 
UniRef100_Q3JTU2 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_Q31Y89 Putative ARAC-type regulatory protein n=1 Tax=S...    50   2e-04 
UniRef100_Q21RS0 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_Q1QZK4 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_Q169B6 Transcriptional regulator, AraC family, putativ...    50   2e-04 
UniRef100_Q04A46 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_B8FQG3 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_B1JCK3 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_A8H057 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_A4XTC3 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_A4JLH9 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_A3M8D9 Putative transcriptional regulator (AraC family...    50   2e-04 
UniRef100_Q9AJW5 Putative uncharacterized protein n=1 Tax=Shigel...    50   2e-04 
UniRef100_Q9AFU2 Orf, hypothetical n=2 Tax=Shigella flexneri Rep...    50   2e-04 
UniRef100_C3QS56 Two-component system sensor histidine kinase/re...    50   2e-04 
UniRef100_C3QNN5 Two-component system sensor histidine kinase/re...    50   2e-04 
UniRef100_C3JL13 Transcriptional regulatory protein n=1 Tax=Rhod...    50   2e-04 
UniRef100_C2Z7I0 Transcriptional regulator, AraC n=2 Tax=Bacillu...    50   2e-04 
UniRef100_C1MDN6 Xylose operon regulatory protein n=1 Tax=Citrob...    50   2e-04 
UniRef100_C0Y4X0 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_C0EGI7 Putative uncharacterized protein n=1 Tax=Clostr...    50   2e-04 
UniRef100_B7WYM5 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_B7RT67 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_B7CUM6 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_B3KAN5 Response regulator receiver n=1 Tax=Geobacillus...    50   2e-04 
UniRef100_B2U5Z6 Transcriptional regulator, AraC family protein ...    50   2e-04 
UniRef100_B1RDH1 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_B1HHU3 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_B1DDD1 Two component transcriptional regulator, AraC f...    50   2e-04 
UniRef100_Q0TTY3 Transcriptional regulator, AraC family n=5 Tax=...    50   2e-04 
UniRef100_B0J6E8 Helix-turn-helix-domain containing protein AraC...    50   2e-04 
UniRef100_A8EEV7 Transcriptional regulator, AraC family n=2 Tax=...    50   2e-04 
UniRef100_A7M490 Sensor protein n=1 Tax=Bacteroides ovatus ATCC ...    50   2e-04 
UniRef100_A7M2Q7 Sensor protein n=1 Tax=Bacteroides ovatus ATCC ...    50   2e-04 
UniRef100_A7B7P4 Putative uncharacterized protein n=1 Tax=Rumino...    50   2e-04 
UniRef100_A6PTZ5 Helix-turn-helix-domain containing protein, Ara...    50   2e-04 
UniRef100_A5ZIV7 Sensor protein n=1 Tax=Bacteroides caccae ATCC ...    50   2e-04 
UniRef100_A4NWG9 Xylose operon regulatory protein n=2 Tax=Haemop...    50   2e-04 
UniRef100_A4NAG3 Xylose operon regulatory protein n=1 Tax=Haemop...    50   2e-04 
UniRef100_A4N245 Xylose operon regulatory protein n=2 Tax=Haemop...    50   2e-04 
UniRef100_A4MGY1 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_B7UWU1 Probable transcriptional regulator n=4 Tax=Pseu...    50   2e-04 
UniRef100_UPI000197B404 hypothetical protein BACCOPRO_02224 n=1 ...    50   2e-04 
UniRef100_UPI000174610C response regulator receiver domain prote...    50   2e-04 
UniRef100_Q8A0R4 Transcriptional regulator n=1 Tax=Bacteroides t...    50   2e-04 
UniRef100_Q7CYK8 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_Q73P79 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_Q6F8C0 Putative transcriptional regulator (AraC family...    50   2e-04 
UniRef100_Q3K8D0 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_Q32AI5 Putative regulator of xyl operon n=1 Tax=Shigel...    50   2e-04 
UniRef100_Q0TGR0 Hypothetical transcriptional regulator YbcM n=1...    50   2e-04 
UniRef100_B7L6Y5 DNA-binding transcriptional activator, xylose-b...    50   2e-04 
UniRef100_B6I3E2 Truncated xylose operon regulator n=1 Tax=Esche...    50   2e-04 
UniRef100_C2LFG5 Transcriptional regulator n=2 Tax=Proteus mirab...    50   2e-04 
UniRef100_A6UZX3 4-hydroxyphenylacetate catabolism regulatory pr...    50   2e-04 
UniRef100_A6UYA8 Probable transcriptional regulator n=1 Tax=Pseu...    50   2e-04 
UniRef100_A6LQK0 Helix-turn-helix-domain containing protein, Ara...    50   2e-04 
UniRef100_A4XFU2 Two component transcriptional regulator, AraC f...    50   2e-04 
UniRef100_A4SPX5 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_A1VJG3 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_A1RFS7 Two component transcriptional regulator, AraC f...    50   2e-04 
UniRef100_A1RF43 Transcriptional regulator, AraC family n=2 Tax=...    50   2e-04 
UniRef100_A1KA43 Putative ornithine utilization regulator n=1 Ta...    50   2e-04 
UniRef100_Q2C7B4 Putative transcriptional regulator n=1 Tax=Phot...    50   2e-04 
UniRef100_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacill...    50   2e-04 
UniRef100_Q1ZVK9 Transcriptional regulatory, AraC-like protein n...    50   2e-04 
UniRef100_Q1N693 AraC-type DNA-binding domain-containing protein...    50   2e-04 
UniRef100_Q1N3I2 AraC-type DNA-binding domain-containing protein...    50   2e-04 
UniRef100_Q0FEZ3 Transcriptional regulator, AraC family protein ...    50   2e-04 
UniRef100_C3BUY8 Transcriptional regulator, AraC n=1 Tax=Bacillu...    50   2e-04 
UniRef100_C2AY19 Putative uncharacterized protein n=1 Tax=Citrob...    50   2e-04 
UniRef100_C1ABV7 AraC family transcriptional regulator n=1 Tax=G...    50   2e-04 
UniRef100_C0X5H9 AraC family transcriptional regulator n=5 Tax=E...    50   2e-04 
UniRef100_C0EWL7 Putative uncharacterized protein n=1 Tax=Eubact...    50   2e-04 
UniRef100_C0EDG6 Putative uncharacterized protein (Fragment) n=1...    50   2e-04 
UniRef100_C0CWR9 Putative uncharacterized protein n=1 Tax=Clostr...    50   2e-04 
UniRef100_C0BFD5 Putative uncharacterized protein n=1 Tax=Coproc...    50   2e-04 
UniRef100_C0AF26 Transcriptional regulator, AraC family (Fragmen...    50   2e-04 
UniRef100_B9XAQ1 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_B9DEZ9 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_B7YAV5 Two component transcriptional regulator, AraC f...    50   2e-04 
UniRef100_B6WGP7 Sensor protein n=1 Tax=Bacteroides finegoldii D...    50   2e-04 
UniRef100_B3HZK9 Xylose operon regulatory protein n=1 Tax=Escher...    50   2e-04 
UniRef100_B3HVL6 Transcriptional regulator, AraC family n=7 Tax=...    50   2e-04 
UniRef100_B1DE03 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_B1BNL5 Transcriptional regulator, AraC family n=1 Tax=...    50   2e-04 
UniRef100_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bacter...    50   2e-04 
UniRef100_B0ND18 Putative uncharacterized protein n=1 Tax=Clostr...    50   2e-04 
UniRef100_A8RR78 Putative uncharacterized protein n=1 Tax=Clostr...    50   2e-04 
UniRef100_A8RGS2 Putative uncharacterized protein n=1 Tax=Clostr...    50   2e-04 
UniRef100_A8RF95 Putative uncharacterized protein n=1 Tax=Eubact...    50   2e-04 
UniRef100_A7VHF1 Putative uncharacterized protein n=1 Tax=Clostr...    50   2e-04 
UniRef100_A7LTR7 Putative uncharacterized protein n=1 Tax=Bacter...    50   2e-04 
UniRef100_A6PNY7 Helix-turn-helix-domain containing protein, Ara...    50   2e-04 
UniRef100_A6GLT9 Transcriptional regulator, AraC family protein ...    50   2e-04 
UniRef100_A4THW4 Transcriptional regulator, AraC family n=9 Tax=...    50   2e-04 
UniRef100_A6BK22 Putative uncharacterized protein n=1 Tax=Dorea ...    50   2e-04 
UniRef100_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacter...    50   2e-04 
UniRef100_A4BCC5 PurR protein n=1 Tax=Reinekea sp. MED297 RepID=...    50   2e-04 
UniRef100_P0ACI5 Xylose operon regulatory protein n=37 Tax=Enter...    50   2e-04 
UniRef100_UPI000196A34F hypothetical protein BACCELL_05328 n=1 T...    50   3e-04 
UniRef100_UPI0001910B97 xylose operon regulatory protein n=1 Tax...    50   3e-04 
UniRef100_UPI00016B1D49 transcriptional regulator, AraC family p...    50   3e-04 
UniRef100_UPI00016B075F transcriptional regulator, AraC family p...    50   3e-04 
UniRef100_UPI00016AD4A3 transcriptional regulator, AraC family p...    50   3e-04 
UniRef100_UPI00016AC31B transcriptional regulator, AraC family p...    50   3e-04 
UniRef100_UPI00016A84A2 xylose operon regluatory protein n=1 Tax...    50   3e-04 
UniRef100_UPI00016A7E69 transcriptional regulator, AraC family p...    50   3e-04 
UniRef100_UPI00016A5835 xylose operon regluatory protein n=1 Tax...    50   3e-04 
UniRef100_UPI00005F8756 COG2207: AraC-type DNA-binding domain-co...    50   3e-04 
UniRef100_UPI00005F71FE COG4936: Predicted sensor domain n=1 Tax...    50   3e-04 
UniRef100_Q9K690 Two-component response regulator n=1 Tax=Bacill...    50   3e-04 
UniRef100_Q8ZL89 Xylose operon regulatory protein n=1 Tax=Salmon...    50   3e-04 
UniRef100_Q8A097 Sensor protein n=1 Tax=Bacteroides thetaiotaomi...    50   3e-04 
UniRef100_Q4K9I4 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_Q3JU69 Transcriptional regulator, AraC family n=2 Tax=...    50   3e-04 
UniRef100_Q31V49 Putative regulator of xyl operon n=1 Tax=Shigel...    50   3e-04 
UniRef100_Q2SW41 Xylose operon regluatory protein n=1 Tax=Burkho...    50   3e-04 
UniRef100_Q2S7F1 AraC-type DNA-binding domain-containing protein...    50   3e-04 
UniRef100_Q2S058 Sensor protein n=1 Tax=Salinibacter ruber DSM 1...    50   3e-04 
UniRef100_Q2IYF7 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_Q2ITV5 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_Q0VQ50 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_Q0T2B6 Putative ARAC-type regulatory protein n=1 Tax=S...    50   3e-04 
UniRef100_B5RGL5 Xylose operon regulatory protein n=1 Tax=Salmon...    50   3e-04 
UniRef100_B5BHU8 Xylose operon regulatory protein n=2 Tax=Salmon...    50   3e-04 
UniRef100_B4ENA4 AraC family regulatory protein n=1 Tax=Burkhold...    50   3e-04 
UniRef100_B2IB01 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_B2IAY9 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_B1KB48 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_B0VRH7 Putative transcriptional regulator (AraC family...    50   3e-04 
UniRef100_B0KRY1 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_A9KKI7 Two component transcriptional regulator, AraC f...    50   3e-04 
UniRef100_A8LK68 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_A8GE09 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_A6LYY5 Helix-turn-helix-domain containing protein, Ara...    50   3e-04 
UniRef100_A5W0A1 Transcriptional regulator, AraC family n=2 Tax=...    50   3e-04 
UniRef100_A4XNX6 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_A3QFM4 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_B2HYH2 AraC-type DNA-binding domain-containing protein...    50   3e-04 
UniRef100_A1B650 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_A0KE57 Transcriptional regulator, AraC family n=2 Tax=...    50   3e-04 
UniRef100_Q6X9E2 Trp1 (Fragment) n=1 Tax=Bacillus cereus RepID=Q...    50   3e-04 
UniRef100_Q2C9Q0 Transcriptional regulator, AraC family protein ...    50   3e-04 
UniRef100_C3ECY2 Transcriptional regulator, AraC n=1 Tax=Bacillu...    50   3e-04 
UniRef100_C3DVZ8 Transcriptional regulator, AraC n=2 Tax=Bacillu...    50   3e-04 
UniRef100_C3D3N2 Transcriptional regulator, AraC n=1 Tax=Bacillu...    50   3e-04 
UniRef100_C3CKI1 Transcriptional regulator, AraC n=2 Tax=Bacillu...    50   3e-04 
UniRef100_C3CBL3 Transcriptional regulator, AraC n=1 Tax=Bacillu...    50   3e-04 
UniRef100_B7IML9 Transcriptional regulator, AraC family n=3 Tax=...    50   3e-04 
UniRef100_Q81BP6 Transcriptional regulator, AraC family n=3 Tax=...    50   3e-04 
UniRef100_C2RQ05 Transcriptional regulator, AraC n=1 Tax=Bacillu...    50   3e-04 
UniRef100_C2RA17 Transcriptional regulator, AraC n=1 Tax=Bacillu...    50   3e-04 
UniRef100_C2QV11 Transcriptional regulator, AraC n=2 Tax=Bacillu...    50   3e-04 
UniRef100_B7HAA2 Transcriptional regulator, AraC family n=4 Tax=...    50   3e-04 
UniRef100_C2NJL9 Transcriptional regulator, AraC n=1 Tax=Bacillu...    50   3e-04 
UniRef100_C2N2V1 Transcriptional regulator, AraC n=2 Tax=Bacillu...    50   3e-04 
UniRef100_C2FU87 AraC family transcriptional regulator n=1 Tax=S...    50   3e-04 
UniRef100_C2BC56 Putative uncharacterized protein n=1 Tax=Citrob...    50   3e-04 
UniRef100_C1RS06 DNA-binding domain-containing protein, AraC-typ...    50   3e-04 
UniRef100_C1MFV7 RhaR n=1 Tax=Citrobacter sp. 30_2 RepID=C1MFV7_...    50   3e-04 
UniRef100_C1DSB8 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_C0DLT3 Putative uncharacterized protein n=1 Tax=Neisse...    50   3e-04 
UniRef100_B9BIA3 Transcriptional regulator, AraC family n=2 Tax=...    50   3e-04 
UniRef100_A9ARG6 LacI family transcriptional regulator n=2 Tax=B...    50   3e-04 
UniRef100_B6W1A9 Putative uncharacterized protein n=1 Tax=Bacter...    50   3e-04 
UniRef100_B5UM96 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_B5MX63 Xylose operon regulatory protein n=1 Tax=Salmon...    50   3e-04 
UniRef100_B4X321 Transcriptional regulator, AraC family protein ...    50   3e-04 
UniRef100_A0RFU0 Transcriptional regulator, AraC family n=2 Tax=...    50   3e-04 
UniRef100_B4SWL0 Xylose operon regulatory protein n=19 Tax=Salmo...    50   3e-04 
UniRef100_B3KJR3 Helix-turn-helix-domain containing protein AraC...    50   3e-04 
UniRef100_B3CHH8 Sensor protein n=1 Tax=Bacteroides intestinalis...    50   3e-04 
UniRef100_B3CG26 Sensor protein n=1 Tax=Bacteroides intestinalis...    50   3e-04 
UniRef100_B2H5F3 Transcriptional regulator, AraC family n=2 Tax=...    50   3e-04 
UniRef100_B1SUB1 Two component transcriptional regulator, AraC f...    50   3e-04 
UniRef100_B1D615 Two component transcriptional regulator, AraC f...    50   3e-04 
UniRef100_B1D5V7 Two component transcriptional regulator, AraC f...    50   3e-04 
UniRef100_B0A839 Putative uncharacterized protein n=1 Tax=Clostr...    50   3e-04 
UniRef100_A8SSH3 Putative uncharacterized protein n=1 Tax=Coproc...    50   3e-04 
UniRef100_A8SAS3 Putative uncharacterized protein n=1 Tax=Faecal...    50   3e-04 
UniRef100_A8S8N9 Putative uncharacterized protein n=1 Tax=Faecal...    50   3e-04 
UniRef100_A3N7Q8 Transcriptional regulator, AraC family n=6 Tax=...    50   3e-04 
UniRef100_A8EF76 Transcriptional regulator, AraC family n=3 Tax=...    50   3e-04 
UniRef100_A7VNG5 Putative uncharacterized protein n=1 Tax=Clostr...    50   3e-04 
UniRef100_A6P0J9 Putative uncharacterized protein n=1 Tax=Bacter...    50   3e-04 
UniRef100_A6EZC7 AraC-type DNA-binding domain-containing protein...    50   3e-04 
UniRef100_A6B1C8 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_A4LUE8 Transcriptional regulator, AraC family n=1 Tax=...    50   3e-04 
UniRef100_A4BD27 Transcriptional regulator, AraC family protein ...    50   3e-04 
UniRef100_A4ATE5 Transcriptional regulator n=1 Tax=Flavobacteria...    50   3e-04 
UniRef100_A3VWR0 Transcriptional regulator, AraC family protein ...    50   3e-04 
UniRef100_A3L2M1 Putative uncharacterized protein n=1 Tax=Pseudo...    50   3e-04 
UniRef100_A9U895 Predicted protein (Fragment) n=1 Tax=Physcomitr...    50   3e-04 
UniRef100_UPI0001A438D6 AraC family transcription regulator n=1 ...    49   4e-04 
UniRef100_UPI0001744BA4 putative AraC-family transcriptional reg...    49   4e-04 
UniRef100_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax...    49   4e-04 
UniRef100_Q9JXM9 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_Q97JF3 AraC-type sugar metabolism regulator n=1 Tax=Cl...    49   4e-04 
UniRef100_Q8XS91 Probable transcription regulator protein n=1 Ta...    49   4e-04 
UniRef100_Q7MJ65 Putative uncharacterized protein VV2297 n=2 Tax...    49   4e-04 
UniRef100_Q5LPZ2 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_Q4K877 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_Q3KG85 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_Q392J3 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_Q2SAU6 AraC-type DNA-binding domain-containing protein...    49   4e-04 
UniRef100_Q0HJ25 Transcriptional regulator, AraC family n=2 Tax=...    49   4e-04 
UniRef100_Q02Y42 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_B9MLZ1 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_B7K731 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_B6JB31 Transcriptional regulator, AraC-family n=1 Tax=...    49   4e-04 
UniRef100_B4SMK6 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_B4SJH0 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_B2JV94 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_B2HXY7 AraC-type DNA-binding domain-containing protein...    49   4e-04 
UniRef100_B1Y124 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_B1IEW7 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_B0VEM3 Putative HTH-type transcriptional regulator (Ar...    49   4e-04 
UniRef100_A9KN27 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_A8I184 Transcriptional regulator n=1 Tax=Azorhizobium ...    49   4e-04 
UniRef100_A6LW09 Response regulator receiver protein n=1 Tax=Clo...    49   4e-04 
UniRef100_A6LVZ2 Helix-turn-helix-domain containing protein, Ara...    49   4e-04 
UniRef100_A4JSU6 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_A3PK11 Transcriptional regulator, AraC family with ami...    49   4e-04 
UniRef100_A2RJU9 Transcriptional regulator, araC family n=1 Tax=...    49   4e-04 
UniRef100_A1KW43 Putative transcriptional regulator n=1 Tax=Neis...    49   4e-04 
UniRef100_Q3Y0G8 Helix-turn-helix, AraC type n=1 Tax=Enterococcu...    49   4e-04 
UniRef100_Q1N3G2 Transcriptional regulator, AraC family protein ...    49   4e-04 
UniRef100_O52770 Activator protein n=1 Tax=Pseudomonas fluoresce...    49   4e-04 
UniRef100_C3QEZ4 Two-component system sensor histidine kinase/re...    49   4e-04 
UniRef100_C3KAV4 Putative AraC-family transcriptional regulator ...    49   4e-04 
UniRef100_C3K9B9 Putative AraC-family regulatory protein n=1 Tax...    49   4e-04 
UniRef100_C3GTS1 Transcriptional regulator, AraC n=1 Tax=Bacillu...    49   4e-04 
UniRef100_C2VBQ2 Transcriptional regulator, AraC n=1 Tax=Bacillu...    49   4e-04 
UniRef100_C2UV95 Transcriptional regulator, AraC n=1 Tax=Bacillu...    49   4e-04 
UniRef100_C2TXA6 Transcriptional regulator, AraC n=1 Tax=Bacillu...    49   4e-04 
UniRef100_C2PVF4 Transcriptional regulator, AraC n=1 Tax=Bacillu...    49   4e-04 
UniRef100_C2PF07 Transcriptional regulator, AraC n=1 Tax=Bacillu...    49   4e-04 
UniRef100_C1Z1N2 Signal transduction histidine kinase, COG0642 n...    49   4e-04 
UniRef100_C1YUU8 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_C1I2X3 Response regulator receiver protein n=1 Tax=Clo...    49   4e-04 
UniRef100_C1DQG4 ArgR-like transcriptional regulator, AraC famil...    49   4e-04 
UniRef100_C1D1Z3 Putative transcriptional regulator, AraC family...    49   4e-04 
UniRef100_C0T498 DNA-binding domain-containing protein, AraC-typ...    49   4e-04 
UniRef100_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostr...    49   4e-04 
UniRef100_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostr...    49   4e-04 
UniRef100_B8KW71 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_B7BZ45 Putative uncharacterized protein n=1 Tax=Rosebu...    49   4e-04 
UniRef100_B7BVV2 Putative uncharacterized protein n=1 Tax=Rosebu...    49   4e-04 
UniRef100_B7ACV0 Sensor protein n=1 Tax=Bacteroides eggerthii DS...    49   4e-04 
UniRef100_B6VKV5 Transcriptional regulator, arac family n=1 Tax=...    49   4e-04 
UniRef100_B6FKZ8 Putative uncharacterized protein n=1 Tax=Clostr...    49   4e-04 
UniRef100_B5JS07 AraC-type DNA-binding domain-containing protein...    49   4e-04 
UniRef100_B5CYJ6 Putative uncharacterized protein n=1 Tax=Bacter...    49   4e-04 
UniRef100_A3DK80 Two component transcriptional regulator, AraC f...    49   4e-04 
UniRef100_B7JE51 Transcriptional regulator, AraC family n=3 Tax=...    49   4e-04 
UniRef100_B3KJ74 Helix-turn-helix-domain containing protein AraC...    49   4e-04 
UniRef100_B3KFS7 Response regulator receiver n=1 Tax=Geobacillus...    49   4e-04 
UniRef100_B3KB77 Response regulator receiver n=1 Tax=Geobacillus...    49   4e-04 
UniRef100_B3K5E6 Helix-turn-helix-domain containing protein AraC...    49   4e-04 
UniRef100_B3JMG1 Sensor protein n=1 Tax=Bacteroides coprocola DS...    49   4e-04 
UniRef100_B3CFH0 Putative uncharacterized protein n=1 Tax=Bacter...    49   4e-04 
UniRef100_B1DL56 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_B1DK40 Two component transcriptional regulator, AraC f...    49   4e-04 
UniRef100_B1D825 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_B0IUF6 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_B0G5U5 Putative uncharacterized protein n=1 Tax=Dorea ...    49   4e-04 
UniRef100_A8VRA2 Methyl-accepting chemotaxis sensory transducer ...    49   4e-04 
UniRef100_A8T5P3 Transcriptional regulator ExsA n=1 Tax=Vibrio c...    49   4e-04 
UniRef100_A8RKC7 Putative uncharacterized protein n=1 Tax=Clostr...    49   4e-04 
UniRef100_A7VR09 Putative uncharacterized protein n=1 Tax=Clostr...    49   4e-04 
UniRef100_A7M0K0 Sensor protein n=1 Tax=Bacteroides ovatus ATCC ...    49   4e-04 
UniRef100_A7JUC7 AraC family transcriptional regulator n=1 Tax=M...    49   4e-04 
UniRef100_A6PNI6 Helix-turn-helix-domain containing protein, Ara...    49   4e-04 
UniRef100_A6F3K9 Transcriptional regulator, AraC family protein ...    49   4e-04 
UniRef100_A6E3C9 Transcriptional regulator, AraC family protein ...    49   4e-04 
UniRef100_A6AMC0 Transcriptional regulator, AraC family protein ...    49   4e-04 
UniRef100_A3UXF8 Putative transcriptional regulator, AraC/XylS f...    49   4e-04 
UniRef100_A0P1V7 Helix-turn-helix, AraC type protein n=1 Tax=Lab...    49   4e-04 
UniRef100_B7XKI8 Transcriptional regulator, AraC family n=1 Tax=...    49   4e-04 
UniRef100_P40408 Uncharacterized HTH-type transcriptional regula...    49   4e-04 
UniRef100_P45043 Xylose operon regulatory protein n=1 Tax=Haemop...    49   4e-04 
UniRef100_UPI0001A439F5 AraC family transcription regulator n=1 ...    49   5e-04 
UniRef100_UPI000197785B two component transcriptional regulator,...    49   5e-04 
UniRef100_UPI0001977523 two component transcriptional regulator,...    49   5e-04 
UniRef100_UPI000196C963 hypothetical protein BRYFOR_02480 n=1 Ta...    49   5e-04 
UniRef100_UPI00019695BE hypothetical protein BACCELL_02269 n=1 T...    49   5e-04 
UniRef100_UPI000196948F hypothetical protein BACCELL_01372 n=1 T...    49   5e-04 
UniRef100_UPI0001904EF0 AraC family transcriptional regulator n=...    49   5e-04 
UniRef100_UPI00016AF01D transcriptional regulator, AraC family p...    49   5e-04 
UniRef100_UPI00016ACF34 transcriptional regulator, AraC family p...    49   5e-04 
UniRef100_UPI00016A9158 transcriptional regulator, AraC family p...    49   5e-04 
UniRef100_UPI00016A5661 transcriptional regulator, AraC family p...    49   5e-04 
UniRef100_UPI00016A2A8F transcriptional regulator, AraC family p...    49   5e-04 
UniRef100_UPI0000DAF655 hypothetical protein PaerPA_01005205 n=1...    49   5e-04 
UniRef100_UPI00005FAD89 AraC family regulatory protein n=1 Tax=B...    49   5e-04 
UniRef100_Q9HUD7 Probable transcriptional regulator n=1 Tax=Pseu...    49   5e-04 
UniRef100_Q5WCV1 AraC/XylS family transcriptional regulator n=1 ...    49   5e-04 
UniRef100_Q57IF9 Xylose operon regulatory protein (AraC/XylS fam...    49   5e-04 
UniRef100_Q1GDX2 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_Q02N80 Putative transcriptional regulator, AraC family...    49   5e-04 
UniRef100_Q02EY5 Putative transcriptional regulator n=1 Tax=Pseu...    49   5e-04 
UniRef100_C0Q1C3 Xylose operon regulatory protein n=1 Tax=Salmon...    49   5e-04 
UniRef100_B9MG84 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_B7V3C5 Probable transcriptional regulator n=1 Tax=Pseu...    49   5e-04 
UniRef100_B7KQC6 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_B3R987 Putative TRANSCRIPTION REGULATOR PROTEIN; AraC ...    49   5e-04 
UniRef100_A9W799 Helix-turn-helix-domain containing protein AraC...    49   5e-04 
UniRef100_A9MLE9 Putative uncharacterized protein n=1 Tax=Salmon...    49   5e-04 
UniRef100_A8FI25 Response regulator n=1 Tax=Bacillus pumilus SAF...    49   5e-04 
UniRef100_A7FJ27 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_A6TTD1 Response regulator receiver protein n=1 Tax=Alk...    49   5e-04 
UniRef100_A6L1C8 Sensor protein n=1 Tax=Bacteroides vulgatus ATC...    49   5e-04 
UniRef100_A6L1A0 Two-component system response regulator n=1 Tax...    49   5e-04 
UniRef100_A5UIN2 Xylose operon regulatory protein n=2 Tax=Haemop...    49   5e-04 
UniRef100_A5UCZ8 Xylose operon regulatory protein n=1 Tax=Haemop...    49   5e-04 
UniRef100_A3P1C1 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_A1TX04 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_A1JTR8 Pdu and cob operons regulatory protein n=1 Tax=...    49   5e-04 
UniRef100_A4TK67 Transcriptional regulator, AraC family n=17 Tax...    49   5e-04 
UniRef100_Q6QEI8 Putative AraC/XylS family transcription factor ...    49   5e-04 
UniRef100_Q1NH43 Putative AraC-type regulator n=1 Tax=Sphingomon...    49   5e-04 
UniRef100_C3QZI2 Transcriptional regulator n=1 Tax=Bacteroides s...    49   5e-04 
UniRef100_C3QVG6 Two-component system sensor histidine kinase/re...    49   5e-04 
UniRef100_C3QR06 Putative uncharacterized protein n=1 Tax=Bacter...    49   5e-04 
UniRef100_C3QPX4 Transcriptional regulator n=1 Tax=Bacteroides s...    49   5e-04 
UniRef100_C3QHE5 Transcriptional regulator n=1 Tax=Bacteroides s...    49   5e-04 
UniRef100_C3QBD4 Transcriptional regulator n=1 Tax=Bacteroides s...    49   5e-04 
UniRef100_C3Q464 Two-component system sensor histidine kinase/re...    49   5e-04 
UniRef100_C3JXS8 Putative AraC-family transcriptional regulator ...    49   5e-04 
UniRef100_C2V4P3 Transcriptional regulator, AraC n=1 Tax=Bacillu...    49   5e-04 
UniRef100_C2SJI7 Transcriptional regulator, AraC n=1 Tax=Bacillu...    49   5e-04 
UniRef100_C2FQ65 Response regulator n=2 Tax=Lactobacillus planta...    49   5e-04 
UniRef100_C2ENB9 AraC family transcriptional regulator n=2 Tax=L...    49   5e-04 
UniRef100_C1TM41 Response regulator containing CheY-like receive...    49   5e-04 
UniRef100_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_C0VKB7 AraC family transcriptional regulator n=1 Tax=A...    49   5e-04 
UniRef100_C0FPB8 Putative uncharacterized protein n=1 Tax=Rosebu...    49   5e-04 
UniRef100_C0ECP6 Putative uncharacterized protein n=1 Tax=Clostr...    49   5e-04 
UniRef100_C0ECP0 Putative uncharacterized protein n=1 Tax=Clostr...    49   5e-04 
UniRef100_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostr...    49   5e-04 
UniRef100_C0CRX4 Putative uncharacterized protein n=1 Tax=Blauti...    49   5e-04 
UniRef100_C0C9T2 Putative uncharacterized protein n=1 Tax=Subdol...    49   5e-04 
UniRef100_B9DEZ7 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_B7C1L2 Putative uncharacterized protein n=1 Tax=Rosebu...    49   5e-04 
UniRef100_B7AP83 Putative uncharacterized protein n=1 Tax=Bacter...    49   5e-04 
UniRef100_B7ACF3 Sensor protein n=1 Tax=Bacteroides eggerthii DS...    49   5e-04 
UniRef100_B6WEF5 Putative uncharacterized protein n=1 Tax=Bacter...    49   5e-04 
UniRef100_B6W165 Sensor protein n=1 Tax=Bacteroides dorei DSM 17...    49   5e-04 
UniRef100_B5JUX5 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_B5JUH8 Transcriptional regulator, AraC family, putativ...    49   5e-04 
UniRef100_B5I6M9 AraC-family transcriptional regulator n=1 Tax=S...    49   5e-04 
UniRef100_B5CYC7 Putative uncharacterized protein n=1 Tax=Bacter...    49   5e-04 
UniRef100_B5CS19 Putative uncharacterized protein n=1 Tax=Rumino...    49   5e-04 
UniRef100_B4X0H8 Transcriptional regulator, AraC family protein ...    49   5e-04 
UniRef100_B4D591 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_B4D0H6 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_B2WW34 Transcriptional regulator n=1 Tax=Streptomyces ...    49   5e-04 
UniRef100_B1FZQ0 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_B1DAS3 Transcriptional regulator, AraC family n=1 Tax=...    49   5e-04 
UniRef100_B0NW18 Sensor protein n=1 Tax=Bacteroides stercoris AT...    49   5e-04 
UniRef100_A7LVP3 Putative uncharacterized protein n=1 Tax=Bacter...    49   5e-04 
UniRef100_A7LU35 Putative uncharacterized protein n=1 Tax=Bacter...    49   5e-04 
UniRef100_A7JVV0 Possible AraC family transcriptional regulator ...    49   5e-04 
UniRef100_A6PT01 Helix-turn-helix-domain containing protein, Ara...    49   5e-04 
UniRef100_A6DZW0 Transcriptional regulator, AraC family protein ...    49   5e-04 
UniRef100_A6D1Q4 Hypothetical transcriptional regulator YijO n=1...    49   5e-04 
UniRef100_A6BIJ6 Putative uncharacterized protein n=1 Tax=Dorea ...    49   5e-04 
UniRef100_A5ZUG5 Putative uncharacterized protein n=1 Tax=Rumino...    49   5e-04 
UniRef100_A4NJX1 Xylose operon regulatory protein n=1 Tax=Haemop...    49   5e-04 
UniRef100_A4MVP1 Xylose operon regulatory protein n=1 Tax=Haemop...    49   5e-04 
UniRef100_A4C4N2 Putative transcriptional regulator n=1 Tax=Pseu...    49   5e-04 
UniRef100_A3UQ53 Putative transcriptional regulator, AraC/XylS f...    49   5e-04 
UniRef100_A3LJ94 Putative uncharacterized protein n=1 Tax=Pseudo...    49   5e-04 
UniRef100_A2VY61 Helix-turn-helix protein n=1 Tax=Burkholderia c...    49   5e-04 
UniRef100_A1ZC75 Regulatory protein GdhBR, putative n=1 Tax=Micr...    49   5e-04 
UniRef100_UPI0001A44A05 DNA-binding transcriptional regulator Ar...    49   6e-04 
UniRef100_UPI0001A43B8B DNA-binding transcriptional regulator Ar...    49   6e-04 
UniRef100_UPI0001968F98 hypothetical protein BACCELL_03130 n=1 T...    49   6e-04 
UniRef100_UPI0001968A6F hypothetical protein BACCELL_01207 n=1 T...    49   6e-04 
UniRef100_UPI00016AEAC7 xylose operon regluatory protein n=1 Tax...    49   6e-04 
UniRef100_UPI00005FA666 COG4936: Predicted sensor domain n=1 Tax...    49   6e-04 
UniRef100_UPI00005F9C0B COG2207: AraC-type DNA-binding domain-co...    49   6e-04 
UniRef100_UPI00005F8D88 COG2207: AraC-type DNA-binding domain-co...    49   6e-04 
UniRef100_Q98H44 Transcriptional regulator n=1 Tax=Mesorhizobium...    49   6e-04 
UniRef100_Q989Y4 Transcriptional regulator n=1 Tax=Mesorhizobium...    49   6e-04 
UniRef100_Q74LV8 Putative uncharacterized protein n=1 Tax=Lactob...    49   6e-04 
UniRef100_Q6FBV2 Putative transcriptional regulator (AraC family...    49   6e-04 
UniRef100_Q6D4X0 Arabinose operon regulatory protein n=1 Tax=Pec...    49   6e-04 
UniRef100_Q57S05 Putative transcriptional regulator (AraC/XylS f...    49   6e-04 
UniRef100_Q4K833 Transcriptional regulator ArgR n=1 Tax=Pseudomo...    49   6e-04 
UniRef100_Q32C75 Putative ARAC-type regulatory protein n=1 Tax=S...    49   6e-04 
UniRef100_Q15PG2 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_Q0TDA3 Hypothetical transcriptional regulator YqhC n=1...    49   6e-04 
UniRef100_B8I0K9 Two component transcriptional regulator, AraC f...    49   6e-04 
UniRef100_B8EAE4 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_B8DZ09 Two component transcriptional regulator, AraC f...    49   6e-04 
UniRef100_B7NJ11 Putative DNA-binding transcriptional regulator ...    49   6e-04 
UniRef100_B7LPX8 Putative DNA-binding transcriptional regulator ...    49   6e-04 
UniRef100_B7LGE8 Putative DNA-binding transcriptional regulator ...    49   6e-04 
UniRef100_B4RRZ3 Transcriptional regulator, AraC family protein ...    49   6e-04 
UniRef100_A8G7X2 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_A8ARF6 Putative uncharacterized protein n=1 Tax=Citrob...    49   6e-04 
UniRef100_A7ZRP6 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_A6VY36 Helix-turn-helix-domain containing protein AraC...    49   6e-04 
UniRef100_A6M1R0 Response regulator receiver protein n=1 Tax=Clo...    49   6e-04 
UniRef100_A5GD53 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_A4XNI0 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_A4VXN7 Response regulator n=1 Tax=Streptococcus suis 0...    49   6e-04 
UniRef100_A4IPA8 Putative uncharacterized protein n=1 Tax=Geobac...    49   6e-04 
UniRef100_A1JQR6 AraC-family regulatory protein n=1 Tax=Yersinia...    49   6e-04 
UniRef100_A0KJI6 Arabinose operon regulatory protein n=1 Tax=Aer...    49   6e-04 
UniRef100_A0KI73 Putative HTH-type transcriptional regulator Yij...    49   6e-04 
UniRef100_Q4BYL1 Helix-turn-helix, Fis-type n=1 Tax=Crocosphaera...    49   6e-04 
UniRef100_Q1ZHB4 Transcriptional regulator, AraC/XylS family pro...    49   6e-04 
UniRef100_B5YR54 Transcriptional regulator, AraC family n=13 Tax...    49   6e-04 
UniRef100_C3JXZ2 Putative AraC family regulatory protein n=1 Tax...    49   6e-04 
UniRef100_C3BGM2 Transcriptional regulator, AraC n=1 Tax=Bacillu...    49   6e-04 
UniRef100_C3BDS2 Transcriptional regulator, AraC n=1 Tax=Bacillu...    49   6e-04 
UniRef100_C3AI72 Transcriptional regulator, AraC n=1 Tax=Bacillu...    49   6e-04 
UniRef100_C2DVQ2 AraC family transcriptional regulator n=1 Tax=E...    49   6e-04 
UniRef100_C1Z805 DNA-binding domain-containing protein, AraC-typ...    49   6e-04 
UniRef100_A8A4G8 Transcriptional regulator, AraC family n=17 Tax...    49   6e-04 
UniRef100_C1M4U2 Transcriptional regulator n=1 Tax=Citrobacter s...    49   6e-04 
UniRef100_C1HIC6 Transcriptional regulator YqhC n=4 Tax=Escheric...    49   6e-04 
UniRef100_C1DQ04 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_C1DA10 Helix-turn-helix-domain containing protein, Ara...    49   6e-04 
UniRef100_C0H183 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_C0FLG9 Putative uncharacterized protein n=1 Tax=Clostr...    49   6e-04 
UniRef100_C0FK66 Putative uncharacterized protein n=1 Tax=Clostr...    49   6e-04 
UniRef100_C0D9W5 Putative uncharacterized protein n=1 Tax=Clostr...    49   6e-04 
UniRef100_C0CBB6 Putative uncharacterized protein n=1 Tax=Subdol...    49   6e-04 
UniRef100_C0AE24 AraC-type DNA-binding domain-containing protein...    49   6e-04 
UniRef100_B9DF09 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_B7RZI3 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_B7RUA5 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_B6WPH1 Sensor protein n=1 Tax=Bacteroides finegoldii D...    49   6e-04 
UniRef100_B6WJ69 Sensor protein n=1 Tax=Bacteroides finegoldii D...    49   6e-04 
UniRef100_B6WDT6 Sensor protein n=1 Tax=Bacteroides finegoldii D...    49   6e-04 
UniRef100_B6W4Q4 Sensor protein n=1 Tax=Bacteroides dorei DSM 17...    49   6e-04 
UniRef100_B6F9G5 Putative uncharacterized protein n=1 Tax=Entero...    49   6e-04 
UniRef100_B6AWZ9 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_B5K528 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_B5JM22 Transcriptional regulator, AraC family protein ...    49   6e-04 
UniRef100_B5J591 DJ-1/PfpI family n=1 Tax=Octadecabacter antarct...    49   6e-04 
UniRef100_B4BMA7 Two component transcriptional regulator, AraC f...    49   6e-04 
UniRef100_B3K8I5 Response regulator receiver n=1 Tax=Geobacillus...    49   6e-04 
UniRef100_B3HEY0 Transcriptional regulator, AraC family n=4 Tax=...    49   6e-04 
UniRef100_B3EYL7 Two-component response regulator n=1 Tax=Geobac...    49   6e-04 
UniRef100_B1T203 Transcriptional regulator, AraC family n=1 Tax=...    49   6e-04 
UniRef100_B1DHJ8 Two component transcriptional regulator, AraC f...    49   6e-04 
UniRef100_B1D7R8 Two component transcriptional regulator, AraC f...    49   6e-04 
UniRef100_B0NX83 Putative uncharacterized protein n=1 Tax=Clostr...    49   6e-04 
UniRef100_B0NG76 Putative uncharacterized protein n=1 Tax=Clostr...    49   6e-04 
UniRef100_A8RZE9 Putative uncharacterized protein n=1 Tax=Clostr...    49   6e-04 
UniRef100_A7M0F3 Sensor protein n=1 Tax=Bacteroides ovatus ATCC ...    49   6e-04 
UniRef100_A7M0D3 Sensor protein n=1 Tax=Bacteroides ovatus ATCC ...    49   6e-04 
UniRef100_A6PP78 Helix-turn-helix-domain containing protein, Ara...    49   6e-04 
UniRef100_A6EEH6 Two-component system sensor histidine kinase/re...    49   6e-04 
UniRef100_A5Z8D6 Putative uncharacterized protein n=1 Tax=Eubact...    49   6e-04 
UniRef100_A4CAJ4 Transcriptional regulator, AraC family protein ...    49   6e-04 
UniRef100_A3Y1D2 Putative transcriptional regulator, AraC/XylS f...    49   6e-04 
UniRef100_A3VYC9 Transcriptional regulator, AraC family protein ...    49   6e-04 
UniRef100_A3TUD8 Transcriptional regulator, AraC family protein ...    49   6e-04 
UniRef100_Q46855 Uncharacterized HTH-type transcriptional regula...    49   6e-04 
UniRef100_P77379 Uncharacterized HTH-type transcriptional regula...    49   6e-04 
UniRef100_Q9I1P2 HTH-type transcriptional regulator vqsM n=1 Tax...    49   6e-04 
UniRef100_P07642 Arabinose operon regulatory protein n=1 Tax=Erw...    49   6e-04 
UniRef100_UPI0001A4A75D AraC family regulatory protein n=1 Tax=B...    48   8e-04 
UniRef100_UPI0001A4434D AraC family transcription regulator n=1 ...    48   8e-04 
UniRef100_UPI00019798E1 two component transcriptional regulator,...    48   8e-04 
UniRef100_UPI0001978C34 two-component response regulator n=1 Tax...    48   8e-04 
UniRef100_UPI000190748F transcriptional regulator, AraC family p...    48   8e-04 
UniRef100_UPI0001904265 AraC family transcriptional regulator n=...    48   8e-04 
UniRef100_UPI0001874166 transcriptional regulator, AraC family n...    48   8e-04 
UniRef100_UPI00016A551D transcriptional regulator, AraC family p...    48   8e-04 
UniRef100_UPI0001693F96 transcriptional regulator, AraC family p...    48   8e-04 
UniRef100_Q9KDT8 BH1123 protein n=1 Tax=Bacillus halodurans RepI...    48   8e-04 
UniRef100_Q8YAK9 Lmo0109 protein n=1 Tax=Listeria monocytogenes ...    48   8e-04 
UniRef100_C2DM20 AraC family transcriptional regulator n=2 Tax=E...    48   8e-04 
UniRef100_Q8A333 Transcriptional regulator n=1 Tax=Bacteroides t...    48   8e-04 
UniRef100_Q8A0B0 Sensor protein n=1 Tax=Bacteroides thetaiotaomi...    48   8e-04 
UniRef100_Q880C7 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_Q6D0L5 AraC-family transcriptional regulator n=1 Tax=P...    48   8e-04 
UniRef100_Q65PX8 PurR protein n=1 Tax=Mannheimia succiniciproduc...    48   8e-04 
UniRef100_Q5WCU1 AraC/XylS family transcriptional regulator n=1 ...    48   8e-04 
UniRef100_Q3Z565 Putative ARAC-type regulatory protein n=1 Tax=S...    48   8e-04 
UniRef100_Q3K880 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_Q3K4D8 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_Q24RH8 Putative uncharacterized protein n=1 Tax=Desulf...    48   8e-04 
UniRef100_Q212V0 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_Q1I6Z1 Transcriptional regulator ArgR, AraC family n=1...    48   8e-04 
UniRef100_Q1I6W2 Putative transcriptional regulator, AraC family...    48   8e-04 
UniRef100_Q124I6 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_Q0B3E3 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_B8FH05 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_B7VI30 Putative transcriptional regulator, AraC/XylS f...    48   8e-04 
UniRef100_B7V6N0 Probable transcriptional regulator n=2 Tax=Pseu...    48   8e-04 
UniRef100_B7NK56 Putative AraC-type DNA-binding transcriptional ...    48   8e-04 
UniRef100_B5R6Z2 Hypothetical araC-family transcriptional regula...    48   8e-04 
UniRef100_B5QUX2 Hypothetical araC-family transcriptional regula...    48   8e-04 
UniRef100_B5EYG0 Transcriptional regulator, AraC family protein ...    48   8e-04 
UniRef100_B4SXR3 Transcriptional regulator, AraC family protein ...    48   8e-04 
UniRef100_B4EP12 AraC family regulatory protein n=1 Tax=Burkhold...    48   8e-04 
UniRef100_B2HZF1 AraC-type DNA-binding domain-containing protein...    48   8e-04 
UniRef100_B1Z5E5 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_B0VN08 Putative transcriptional regulator n=1 Tax=Acin...    48   8e-04 
UniRef100_B0TKW3 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_B0KR51 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_A9MVE9 Putative uncharacterized protein n=1 Tax=Salmon...    48   8e-04 
UniRef100_A9GIA9 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_A9BSQ5 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_A9AWB3 Two component transcriptional regulator, AraC f...    48   8e-04 
UniRef100_A6VA80 Transcriptional regulator ArgR n=1 Tax=Pseudomo...    48   8e-04 
UniRef100_A6TTZ3 Response regulator receiver protein n=1 Tax=Alk...    48   8e-04 
UniRef100_A5W0D1 Transcriptional regulator, AraC family n=2 Tax=...    48   8e-04 
UniRef100_A4XMX4 Two component transcriptional regulator, AraC f...    48   8e-04 
UniRef100_A4JS27 Transcriptional regulator, AraC family n=2 Tax=...    48   8e-04 
UniRef100_B7H3K3 Bacterial regulatory helix-turn-helix protein, ...    48   8e-04 
UniRef100_A0KCT9 Transcriptional regulator, AraC family n=2 Tax=...    48   8e-04 
UniRef100_A0AET6 Complete genome n=1 Tax=Listeria welshimeri ser...    48   8e-04 
UniRef100_Q8RSS0 Putative transcriptional regulator n=1 Tax=Lact...    48   8e-04 
UniRef100_Q2CIM2 Transcriptional regulator, AraC family protein ...    48   8e-04 
UniRef100_Q2BAB0 Two-component response regulator yesN n=1 Tax=B...    48   8e-04 
UniRef100_C3R2W2 Two-component system sensor histidine kinase/re...    48   8e-04 
UniRef100_C3JZ91 AraC family transcriptional regulator n=1 Tax=P...    48   8e-04 
UniRef100_B4EVW7 Xylose operon regulator (AraC-family transcript...    48   8e-04 
UniRef100_C1FK03 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_C0FXB4 Putative uncharacterized protein n=1 Tax=Rosebu...    48   8e-04 
UniRef100_B9NP20 Transcriptional regulator, AraC family, putativ...    48   8e-04 
UniRef100_B7B3I2 Putative uncharacterized protein n=1 Tax=Mitsuo...    48   8e-04 
UniRef100_B7AEP5 Sensor protein n=1 Tax=Bacteroides eggerthii DS...    48   8e-04 
UniRef100_B6X431 Putative uncharacterized protein n=1 Tax=Provid...    48   8e-04 
UniRef100_B5QCN4 Transcriptional regulator, AraC family protein ...    48   8e-04 
UniRef100_B5PDL0 Transcriptional regulator, AraC family protein ...    48   8e-04 
UniRef100_B5NHY0 Transcriptional regulator, AraC family protein ...    48   8e-04 
UniRef100_B4X5H8 Transcriptional regulator, AraC family protein ...    48   8e-04 
UniRef100_B4A6F4 Transcriptional regulator, AraC family protein ...    48   8e-04 
UniRef100_B3Y9M1 Transcriptional regulator, AraC family protein ...    48   8e-04 
UniRef100_B1LIJ2 Transcriptional regulator, AraC family n=4 Tax=...    48   8e-04 
UniRef100_A7ZWU2 Transcriptional regulator, AraC family n=8 Tax=...    48   8e-04 
UniRef100_B3CFY4 Sensor protein n=1 Tax=Bacteroides intestinalis...    48   8e-04 
UniRef100_B2Q1H7 Putative uncharacterized protein n=1 Tax=Provid...    48   8e-04 
UniRef100_B1T464 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_B1SDU2 Putative uncharacterized protein n=1 Tax=Strept...    48   8e-04 
UniRef100_B1RCT6 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_B1FK57 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_B1DAE3 Two component transcriptional regulator, AraC f...    48   8e-04 
UniRef100_B1D824 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_B0MM97 Putative uncharacterized protein n=1 Tax=Eubact...    48   8e-04 
UniRef100_A9GTQ0 Transcriptional regulator, AraC family, putativ...    48   8e-04 
UniRef100_A8S8Z3 Putative uncharacterized protein n=1 Tax=Faecal...    48   8e-04 
UniRef100_A8RS42 Putative uncharacterized protein n=1 Tax=Clostr...    48   8e-04 
UniRef100_A7VWR5 Putative uncharacterized protein n=1 Tax=Clostr...    48   8e-04 
UniRef100_A7VPU9 Putative uncharacterized protein n=1 Tax=Clostr...    48   8e-04 
UniRef100_A7AHW2 Sensor protein n=1 Tax=Parabacteroides merdae A...    48   8e-04 
UniRef100_A6FRQ3 Transcriptional regulator, AraC family protein ...    48   8e-04 
UniRef100_A6F8A8 Transcriptional regulator, AraC family n=1 Tax=...    48   8e-04 
UniRef100_A6CGD3 Probable transcription regulator n=1 Tax=Planct...    48   8e-04 
UniRef100_A5ZG15 Putative uncharacterized protein n=1 Tax=Bacter...    48   8e-04 
UniRef100_A5Z7W7 Putative uncharacterized protein n=1 Tax=Eubact...    48   8e-04 
UniRef100_A3UQ73 Helix-turn-helix, Fis-type protein n=1 Tax=Vibr...    48   8e-04 
UniRef100_A3LFL5 Putative uncharacterized protein n=1 Tax=Pseudo...    48   8e-04 
UniRef100_B7UY41 Transcriptional regulator ArgR n=5 Tax=Pseudomo...    48   8e-04 
UniRef100_Q9HWR1 Probable transcriptional regulator n=2 Tax=Pseu...    48   8e-04 
UniRef100_A3K7X5 Transcriptional regulator, AraC family protein ...    48   8e-04 
UniRef100_A3K651 Transcriptional regulator, AraC family protein ...    48   8e-04 
UniRef100_A3I2J9 Putative AraC family transcriptional regulatory...    48   8e-04 
UniRef100_A9U7B6 Predicted protein n=1 Tax=Physcomitrella patens...    48   8e-04 
UniRef100_UPI00019782B0 response regulator receiver protein n=1 ...    48   0.001 
UniRef100_UPI00018737F3 transcriptional regulator ArgR n=1 Tax=P...    48   0.001 
UniRef100_Q8YSB8 Transcriptional regulator n=1 Tax=Nostoc sp. PC...    48   0.001 
UniRef100_Q885K1 Transcriptional regulator ArgR n=1 Tax=Pseudomo...    48   0.001 
UniRef100_Q5E3W4 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_Q4ZQH4 Helix-turn-helix, AraC type n=1 Tax=Pseudomonas...    48   0.001 
UniRef100_Q3M6B2 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_Q2S7S2 AraC-type DNA-binding domain-containing protein...    48   0.001 
UniRef100_Q21DH2 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_Q18BF2 AraC-family transcriptional regulator n=1 Tax=C...    48   0.001 
UniRef100_Q166B1 Transcriptional regulator, AraC family, putativ...    48   0.001 
UniRef100_Q0VSF4 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_B9MPG5 Two component transcriptional regulator, AraC f...    48   0.001 
UniRef100_B8HZ47 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_B6EGK8 HTH-type transcriptional regulator, AraC family...    48   0.001 
UniRef100_B5XU66 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_B2JWK1 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_B2FIJ5 Putative AraC family transcriptional regulator ...    48   0.001 
UniRef100_B1KQ71 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_B1KH61 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_B1KCC5 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_B1JCH7 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_A9ML69 Putative uncharacterized protein n=1 Tax=Salmon...    48   0.001 
UniRef100_A9KS49 Two component transcriptional regulator, AraC f...    48   0.001 
UniRef100_A9BZN3 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_A8ML53 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_A6V354 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_A6KZU3 Sensor protein n=1 Tax=Bacteroides vulgatus ATC...    48   0.001 
UniRef100_A5V467 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_A4XV52 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_A4XMG0 Two component transcriptional regulator, AraC f...    48   0.001 
UniRef100_A4XJ70 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_A4SNG7 Arabinose operon regulatory protein n=1 Tax=Aer...    48   0.001 
UniRef100_A1WC99 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_Q2BDI9 Two-component response regulator n=1 Tax=Bacill...    48   0.001 
UniRef100_Q1Z667 Transcriptional regulator OruR, AraC family pro...    48   0.001 
UniRef100_C3QZ71 Two-component system sensor histidine kinase/re...    48   0.001 
UniRef100_C3QH62 Two-component system sensor histidine kinase/re...    48   0.001 
UniRef100_C2TZD8 Transcriptional regulator, AraC n=2 Tax=Bacillu...    48   0.001 
UniRef100_C2FYS1 Transcriptional regulator n=1 Tax=Sphingobacter...    48   0.001 
UniRef100_C2FUL2 Possible two-component system sensor histidine ...    48   0.001 
UniRef100_C1UW40 DNA-binding domain-containing protein, AraC-typ...    48   0.001 
UniRef100_C1TV33 DNA-binding domain-containing protein, AraC-typ...    48   0.001 
UniRef100_C1TUA7 Signal transduction histidine kinase, COG0642 n...    48   0.001 
UniRef100_C1PQA7 Response regulator containing CheY-like receive...    48   0.001 
UniRef100_C1PB78 Two component transcriptional regulator, AraC f...    48   0.001 
UniRef100_B7UJF8 Predicted DNA-binding transcriptional regulator...    48   0.001 
UniRef100_C1DJG3 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_C0D042 Putative uncharacterized protein n=1 Tax=Clostr...    48   0.001 
UniRef100_B7DMQ0 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_B6XCN1 Putative uncharacterized protein n=1 Tax=Provid...    48   0.001 
UniRef100_B6X0S1 Putative uncharacterized protein n=1 Tax=Provid...    48   0.001 
UniRef100_B4X5N3 Transcriptional regulator, AraC family protein ...    48   0.001 
UniRef100_B4WTP1 Transcriptional regulator, AraC family protein ...    48   0.001 
UniRef100_B4CV34 Transcriptional regulator, AraC family n=1 Tax=...    48   0.001 
UniRef100_B3KFH0 Response regulator receiver n=1 Tax=Geobacillus...    48   0.001 
UniRef100_B3KF56 Response regulator receiver n=1 Tax=Geobacillus...    48   0.001 
UniRef100_B3KA98 Response regulator receiver n=1 Tax=Geobacillus...    48   0.001 
UniRef100_B1SVR1 Two component transcriptional regulator, AraC f...    48   0.001 
UniRef100_B1D6F4 Two component transcriptional regulator, AraC f...    48   0.001 
UniRef100_A7M463 Sensor protein n=1 Tax=Bacteroides ovatus ATCC ...    48   0.001 
UniRef100_A7AA81 Putative uncharacterized protein n=1 Tax=Paraba...    48   0.001 
UniRef100_A6PQ22 Helix-turn-helix-domain containing protein, Ara...    48   0.001 
UniRef100_A6CXF5 Putative transcriptional regulator, AraC/XylS f...    48   0.001 
UniRef100_A6CW64 AraC-type DNA-binding domain-containing protein...    48   0.001 
UniRef100_A6ATA6 Transcriptional regulator, AraC family n=2 Tax=...    48   0.001 
UniRef100_A5ZFT5 Sensor protein n=1 Tax=Bacteroides caccae ATCC ...    48   0.001 
UniRef100_A5L411 Putative transcriptional regulator, AraC/XylS f...    48   0.001 
UniRef100_A4C5C3 AraC-type DNA-binding domain-containing protein...    48   0.001 
UniRef100_A4BBD9 Transcriptional regulator, AraC family protein ...    48   0.001 
UniRef100_A3XBN1 Transcriptional regulator, AraC family protein ...    48   0.001 
UniRef100_A3SPA4 Transcriptional regulator, AraC family protein ...    48   0.001 
UniRef100_B7V4X3 Probable transcriptional regulator n=4 Tax=Pseu...    48   0.001 
UniRef100_A3J5W6 Sensor protein n=1 Tax=Flavobacteria bacterium ...    48   0.001 
UniRef100_A2W5N1 AraC-type DNA-binding domain-containing protein...    48   0.001 
UniRef100_A2U0X7 Regulatory helix-turn-helix protein, AraC famil...    48   0.001 
UniRef100_A2PNR9 Transcriptional regulator, AraC family protein ...    48   0.001 
UniRef100_B9TM75 Putative uncharacterized protein (Fragment) n=1...    48   0.001 
UniRef100_UPI0001A4371F AraC family transcription regulator n=1 ...    47   0.001 
UniRef100_UPI0001906683 AraC family transcriptional regulator n=...    47   0.001 
UniRef100_UPI000185541D transcriptional regulator, AraC family p...    47   0.001 
UniRef100_UPI0001693BD0 Two-component response regulator n=1 Tax...    47   0.001 
UniRef100_UPI00005FA2D5 COG2207: AraC-type DNA-binding domain-co...    47   0.001 
UniRef100_UPI00005F75EA COG2207: AraC-type DNA-binding domain-co...    47   0.001 
UniRef100_UPI0000393640 AraC/XylS-type transcriptional regulator...    47   0.001 
UniRef100_Q92P01 Transcription regulator AraC family n=1 Tax=Sin...    47   0.001 
UniRef100_Q8Y7T2 Lmo1189 protein n=1 Tax=Listeria monocytogenes ...    47   0.001 
UniRef100_Q8G7S1 Probable AraC/XylS-type transcriptional regulat...    47   0.001 
UniRef100_Q8D5I3 AraC-type DNA-binding domain-containing protein...    47   0.001 
UniRef100_Q89YR8 Sensor protein n=1 Tax=Bacteroides thetaiotaomi...    47   0.001 
UniRef100_Q7MCG4 AraC-type DNA-binding domain-containing protein...    47   0.001 
UniRef100_Q7M9P2 BH0401 PROTEIN n=1 Tax=Wolinella succinogenes R...    47   0.001 
UniRef100_Q4QLN1 Conserved hypothetical transcriptional regulato...    47   0.001 
UniRef100_Q4KGB9 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_Q4KBM4 Transcriptional activator MltR n=1 Tax=Pseudomo...    47   0.001 
UniRef100_Q4A0B7 Putative transcriptional regulator n=1 Tax=Stap...    47   0.001 
UniRef100_Q39EM2 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_Q2RUD2 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_Q2L0P0 Enterobactin-dependent positive regulator (AraC...    47   0.001 
UniRef100_Q2K786 Probable transcriptional regulator protein, Ara...    47   0.001 
UniRef100_Q24N17 Putative uncharacterized protein n=1 Tax=Desulf...    47   0.001 
UniRef100_Q1LMY9 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_Q1IPD2 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_Q1I8G1 Putative transcriptional regulator, AraC family...    47   0.001 
UniRef100_Q0B4N6 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_C0Q1D9 Putative transcriptional regulator n=2 Tax=Salm...    47   0.001 
UniRef100_B9MLE5 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_B9K5W8 Transcriptional regulatory protein n=1 Tax=Agro...    47   0.001 
UniRef100_B9K0J1 AraC-type DNA-binding domain-containing protein...    47   0.001 
UniRef100_B5FLF5 Putative transcriptional regulator n=3 Tax=Salm...    47   0.001 
UniRef100_B4EEK3 AraC family regulatory protein n=1 Tax=Burkhold...    47   0.001 
UniRef100_B3PRK8 Probable transcriptional regulator protein, Ara...    47   0.001 
UniRef100_B3DPC2 Putative AraC-type DNA-binding protein n=1 Tax=...    47   0.001 
UniRef100_B2V3H7 DNA-bindng response regulator, AraC family n=1 ...    47   0.001 
UniRef100_B2V1P8 Putative transcriptional regulator, AraC family...    47   0.001 
UniRef100_B2JIQ6 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_B2AIB0 Putative transcription regulator, AraC family n...    47   0.001 
UniRef100_A9VTW6 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_A9R8V6 Arabinose operon regulatory protein n=1 Tax=Yer...    47   0.001 
UniRef100_A9KJM4 Two component transcriptional regulator, AraC f...    47   0.001 
UniRef100_A9GCA5 Transcriptional regulator, ArsR family n=1 Tax=...    47   0.001 
UniRef100_A8MKK7 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_A8APR4 Putative uncharacterized protein n=1 Tax=Citrob...    47   0.001 
UniRef100_A7IJH1 Helix-turn-helix-domain containing protein AraC...    47   0.001 
UniRef100_A6V8F0 Probable transcriptional regulator n=1 Tax=Pseu...    47   0.001 
UniRef100_A6V4I7 HTH-type transcriptional regulator VqsM (Virule...    47   0.001 
UniRef100_A6UAE9 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_A6KZ04 Two-component system sensor histidine kinase/re...    47   0.001 
UniRef100_A5FEH9 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_A4XHB8 Two component transcriptional regulator, AraC f...    47   0.001 
UniRef100_A4IKY7 Putative uncharacterized protein n=1 Tax=Geobac...    47   0.001 
UniRef100_A1JLW0 Putative AraC-family transcriptional regulatory...    47   0.001 
UniRef100_A0AHT2 Complete genome n=1 Tax=Listeria welshimeri ser...    47   0.001 
UniRef100_Q48G15 Transcriptional regulator ArgR n=2 Tax=Pseudomo...    47   0.001 
UniRef100_Q848L5 UqhC n=1 Tax=uncultured bacterium RepID=Q848L5_...    47   0.001 
UniRef100_Q4EV32 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_Q2B9I5 Putative uncharacterized protein n=1 Tax=Bacill...    47   0.001 
UniRef100_Q1ZVW8 Putative transcriptional regulator, AraC/XylS f...    47   0.001 
UniRef100_O69047 Putative XylS/AraC transcriptional activator (F...    47   0.001 
UniRef100_C3RA41 Two-component system sensor histidine kinase/re...    47   0.001 
UniRef100_C3QQF0 Two-component system sensor histidine kinase/re...    47   0.001 
UniRef100_C3QNL2 Two-component system sensor histidine kinase/re...    47   0.001 
UniRef100_C3QK24 Two-component system sensor histidine kinase/re...    47   0.001 
UniRef100_C3PX95 Two-component system sensor histidine kinase/re...    47   0.001 
UniRef100_C2MRF5 DNA-binding response regulator n=1 Tax=Bacillus...    47   0.001 
UniRef100_C2GWE4 AraC/XylS family transcriptional regulator n=1 ...    47   0.001 
UniRef100_C2BXH0 Response regulator n=1 Tax=Listeria grayi DSM 2...    47   0.001 
UniRef100_C1U867 DNA-binding domain-containing protein, AraC-typ...    47   0.001 
UniRef100_C1S1K5 Transcriptional regulator containing an amidase...    47   0.001 
UniRef100_C1M7E0 AraC-family transcriptional regulator n=1 Tax=C...    47   0.001 
UniRef100_C0VLH8 AraC family transcriptional regulator n=1 Tax=A...    47   0.001 
UniRef100_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubact...    47   0.001 
UniRef100_B9Z822 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_B9NRL1 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_B8L5B4 Transcriptional regulator n=1 Tax=Stenotrophomo...    47   0.001 
UniRef100_B7WVN7 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_B7CDP9 Putative uncharacterized protein n=1 Tax=Eubact...    47   0.001 
UniRef100_B7C3W2 Putative uncharacterized protein n=1 Tax=Rosebu...    47   0.001 
UniRef100_B7BW88 Putative uncharacterized protein n=1 Tax=Rosebu...    47   0.001 
UniRef100_B6B8R5 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_B5WQR3 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_B5PRM9 Putative transcriptional regulator n=1 Tax=Salm...    47   0.001 
UniRef100_B5MH89 Putative transcriptional regulator n=2 Tax=Salm...    47   0.001 
UniRef100_B4TZ74 Putative transcriptional regulator n=4 Tax=Salm...    47   0.001 
UniRef100_B4BIQ8 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_A0Q7E0 Transcriptional regulator, AraC family n=2 Tax=...    47   0.001 
UniRef100_B4A594 Putative transcriptional regulator n=1 Tax=Salm...    47   0.001 
UniRef100_B4T969 Putative transcriptional regulator n=7 Tax=Salm...    47   0.001 
UniRef100_B3KAH7 Response regulator receiver n=1 Tax=Geobacillus...    47   0.001 
UniRef100_B3K5A4 Response regulator receiver n=1 Tax=Geobacillus...    47   0.001 
UniRef100_Q0TS97 Transcriptional regulator, AraC family n=3 Tax=...    47   0.001 
UniRef100_B1R1I5 Transcriptional regulator, AraC family n=1 Tax=...    47   0.001 
UniRef100_B1R168 Putative transcriptional regulator, AraC family...    47   0.001 
UniRef100_B1D8F1 Two component transcriptional regulator, AraC f...    47   0.001 
UniRef100_B0NC11 Putative uncharacterized protein n=1 Tax=Clostr...    47   0.001 
UniRef100_B0IZF6 Transcriptional regulator, AraC family n=2 Tax=...    47   0.001 
UniRef100_A9HF71 Transcriptional regulator, AraC family, putativ...    47   0.001 
UniRef100_A8S8J9 Putative uncharacterized protein n=1 Tax=Faecal...    47   0.001 
UniRef100_A8RM75 Putative uncharacterized protein n=1 Tax=Clostr...    47   0.001 
UniRef100_A7VQN5 Putative uncharacterized protein n=1 Tax=Clostr...    47   0.001 
UniRef100_A7VHF3 Putative uncharacterized protein n=1 Tax=Clostr...    47   0.001 
UniRef100_A7M5T3 Sensor protein n=1 Tax=Bacteroides ovatus ATCC ...    47   0.001 
UniRef100_A7M2N4 Sensor protein n=1 Tax=Bacteroides ovatus ATCC ...    47   0.001 
UniRef100_A7B594 Putative uncharacterized protein n=1 Tax=Rumino...    47   0.001 
UniRef100_A6PP86 Helix-turn-helix-domain containing protein, Ara...    47   0.001 
UniRef100_A6E6Q9 Sensor protein n=1 Tax=Pedobacter sp. BAL39 Rep...    47   0.001 
UniRef100_A6DLX0 Transcriptional regulator n=1 Tax=Lentisphaera ...    47   0.001 
UniRef100_A6AK01 Transcriptional regulator, AraC family protein ...    47   0.001 
UniRef100_A6A9M1 Transcriptional regulator, AraC/XylS family n=1...    47   0.001 
UniRef100_A5ZGA4 Sensor protein n=1 Tax=Bacteroides caccae ATCC ...    47   0.001 
UniRef100_A5KU05 Transcriptional regulator, AraC/XylS family pro...    47   0.001 
UniRef100_A4CGA1 Sensor protein n=1 Tax=Robiginitalea biformata ...    47   0.001 
UniRef100_A4A781 AraC-family transcriptional regulator n=1 Tax=C...    47   0.001 
UniRef100_A3XVX8 AraC-type DNA-binding domain-containing protein...    47   0.001 
UniRef100_A2VWX1 AraC-type DNA-binding domain-containing protein...    47   0.001 
UniRef100_UPI0001A44D65 AraC family transcriptional regulator n=...    47   0.002 
UniRef100_UPI0001A42763 AraC family transcription regulator n=1 ...    47   0.002 
UniRef100_UPI000197960A AraC family transcriptional regulator n=...    47   0.002 
UniRef100_UPI0001978B9F response regulator receiver protein n=1 ...    47   0.002 
UniRef100_UPI000196CBC9 hypothetical protein BRYFOR_03116 n=1 Ta...    47   0.002 
UniRef100_UPI0001969235 hypothetical protein BACCELL_03174 n=1 T...    47   0.002 
UniRef100_UPI000190C763 AraC family transcription regulator n=3 ...    47   0.002 
UniRef100_UPI0001909406 transcriptional regulator, AraC family p...    47   0.002 
UniRef100_UPI00019032FA AraC family transcriptional regulator n=...    47   0.002 
UniRef100_UPI00016B0FEF transcriptional regulator, AraC family p...    47   0.002 
UniRef100_UPI00016A4B5E transcriptional regulator, AraC family p...    47   0.002 
UniRef100_UPI0000E0EEBC transcriptional regulator, AraC family p...    47   0.002 
UniRef100_UPI00005F9349 COG2207: AraC-type DNA-binding domain-co...    47   0.002 
UniRef100_UPI00005585A2 COG2207: AraC-type DNA-binding domain-co...    47   0.002 
UniRef100_Q92FE9 Lin0157 protein n=1 Tax=Listeria innocua RepID=...    47   0.002 
UniRef100_Q92CL9 Lin1152 protein n=1 Tax=Listeria innocua RepID=...    47   0.002 
UniRef100_Q8YTX6 Transcriptional regulator n=1 Tax=Nostoc sp. PC...    47   0.002 
UniRef100_Q8XN90 Probable transcriptional regulator n=1 Tax=Clos...    47   0.002 
UniRef100_Q8ES65 Hypothetical conserved protein n=1 Tax=Oceanoba...    47   0.002 
UniRef100_Q8A2Y3 Sensor protein n=1 Tax=Bacteroides thetaiotaomi...    47   0.002 
UniRef100_Q88C44 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q7NVM9 Probable transcriptional regulator, AraC family...    47   0.002 
UniRef100_Q633T9 DNA-binding response regulator n=1 Tax=Bacillus...    47   0.002 
UniRef100_Q5WBT1 Two-component response regulator n=1 Tax=Bacill...    47   0.002 
UniRef100_Q2SUK1 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q2SDE8 AraC-type DNA-binding domain-containing protein...    47   0.002 
UniRef100_Q1GH63 Transcriptional regulator, AraC family with ami...    47   0.002 
UniRef100_Q1DEM4 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q13RH5 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q0VT73 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q0VP86 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q0S9W3 Probable transcriptional regulator, AraC family...    47   0.002 
UniRef100_Q0I193 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q0BMP4 AraC family transcriptional regulator n=1 Tax=F...    47   0.002 
UniRef100_Q0BDJ5 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q046Y6 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B8EM17 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B8DGU9 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B8DC44 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B8CYB7 Helix-turn-helix-domain containing protein AraC...    47   0.002 
UniRef100_B8CGU6 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B5ZT32 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B5FMH1 Transcriptional regulator, AraC family protein ...    47   0.002 
UniRef100_B5BDG9 AraC-family transcriptional regulator n=2 Tax=S...    47   0.002 
UniRef100_B4SW01 AraC-family transcriptional regulator n=2 Tax=S...    47   0.002 
UniRef100_B3R864 Putative Transcriptional Regulator, AraC family...    47   0.002 
UniRef100_B2SGZ9 Transcriptional regulator AraC family protein n...    47   0.002 
UniRef100_B2S6F3 Transcriptional regulator, ARAC family n=3 Tax=...    47   0.002 
UniRef100_B1YZV6 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B1YT91 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B1VLM2 Putative AraC-family transcriptional regulator ...    47   0.002 
UniRef100_B1K606 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B0UWY3 Helix-turn-helix-domain containing protein AraC...    47   0.002 
UniRef100_A9MXV9 Putative uncharacterized protein n=1 Tax=Salmon...    47   0.002 
UniRef100_A9MLQ7 Putative uncharacterized protein n=1 Tax=Salmon...    47   0.002 
UniRef100_Q8FZZ9 Transcriptional regulator, AraC family n=3 Tax=...    47   0.002 
UniRef100_A9KKW7 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A8ZQH7 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A7ZI44 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A7MM10 Putative uncharacterized protein n=1 Tax=Cronob...    47   0.002 
UniRef100_A6X027 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A6TCV2 Putative helix-turn-helix, AraC type n=1 Tax=Kl...    47   0.002 
UniRef100_A6M1U3 Response regulator receiver protein n=1 Tax=Clo...    47   0.002 
UniRef100_A5WB56 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A3D4G0 Helix-turn-helix-domain containing protein, Ara...    47   0.002 
UniRef100_A1WMN8 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A1B2R2 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q9KWN2 Genes for transposase, polyethylene glycol dehy...    47   0.002 
UniRef100_Q6W212 Probable transcriptional regulator protein, Ara...    47   0.002 
UniRef100_Q4EUH7 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q3L989 Putative AraC family transcriptional regulator ...    47   0.002 
UniRef100_Q2C9F7 Putative transcriptional regulator, AraC/XylS f...    47   0.002 
UniRef100_Q1YPI7 Transcriptional regulator, AraC family protein ...    47   0.002 
UniRef100_Q18PC0 AraC-type regulator n=1 Tax=Sphingopyxis terrae...    47   0.002 
UniRef100_C3QLI3 Two-component system sensor histidine kinase/re...    47   0.002 
UniRef100_C3QHU0 Two-component system sensor histidine kinase/re...    47   0.002 
UniRef100_C3Q4I6 Two-component system sensor histidine kinase/re...    47   0.002 
UniRef100_C3L3C2 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_C3F7R0 DNA-binding response regulator n=1 Tax=Bacillus...    47   0.002 
UniRef100_C3BVF5 Transcriptional regulator, AraC n=1 Tax=Bacillu...    47   0.002 
UniRef100_C2TMS1 DNA-binding response regulator n=4 Tax=Bacillus...    47   0.002 
UniRef100_C2FVA1 AraC family transcriptional regulator n=1 Tax=S...    47   0.002 
UniRef100_C2B582 Putative uncharacterized protein n=1 Tax=Citrob...    47   0.002 
UniRef100_C1YVX3 DNA-binding domain-containing protein, AraC-typ...    47   0.002 
UniRef100_C1PUY1 DNA-binding domain-containing protein, AraC-typ...    47   0.002 
UniRef100_Q720P0 Transcriptional regulator, AraC family n=3 Tax=...    47   0.002 
UniRef100_Q724U6 Transcriptional regulator, AraC family n=3 Tax=...    47   0.002 
UniRef100_C1D8X9 Putative uncharacterized protein n=1 Tax=Lariba...    47   0.002 
UniRef100_C0ZM46 Putative AraC family transcriptional regulator ...    47   0.002 
UniRef100_C0XE98 AraC family response regulator n=1 Tax=Lactobac...    47   0.002 
UniRef100_C0RJS9 Putative uncharacterized protein n=1 Tax=Brucel...    47   0.002 
UniRef100_C0G750 Transcriptional regulator, ARAC family protein ...    47   0.002 
UniRef100_C0D5F5 Putative uncharacterized protein n=1 Tax=Clostr...    47   0.002 
UniRef100_C0BZ09 Putative uncharacterized protein n=1 Tax=Clostr...    47   0.002 
UniRef100_B9D7J6 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B6VXN2 Sensor protein n=1 Tax=Bacteroides dorei DSM 17...    47   0.002 
UniRef100_B6RAD1 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B5N8I5 AraC-family transcriptional regulator n=1 Tax=S...    47   0.002 
UniRef100_B4T8J9 AraC-family transcriptional regulator n=8 Tax=S...    47   0.002 
UniRef100_B5MNW3 AraC-family transcriptional regulator n=4 Tax=S...    47   0.002 
UniRef100_B4TZD3 AraC-family transcriptional regulator n=2 Tax=S...    47   0.002 
UniRef100_B4TAB3 Transcriptional regulator, AraC family protein ...    47   0.002 
UniRef100_B5C4G1 AraC-family transcriptional regulator n=1 Tax=S...    47   0.002 
UniRef100_B4X359 Transcriptional regulator, AraC family protein ...    47   0.002 
UniRef100_B4A724 AraC-family transcriptional regulator n=1 Tax=S...    47   0.002 
UniRef100_B7JR06 DNA-binding response regulator n=3 Tax=Bacillus...    47   0.002 
UniRef100_B3YB53 AraC-family transcriptional regulator n=4 Tax=S...    47   0.002 
UniRef100_B3KIA9 Helix-turn-helix-domain containing protein AraC...    47   0.002 
UniRef100_B3KA50 Response regulator receiver n=1 Tax=Geobacillus...    47   0.002 
UniRef100_B3JN51 Putative uncharacterized protein n=1 Tax=Bacter...    47   0.002 
UniRef100_B3C5Q8 Sensor protein n=1 Tax=Bacteroides intestinalis...    47   0.002 
UniRef100_B1TBR0 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B1QT82 Two component transcriptional regulator, AraC f...    47   0.002 
UniRef100_B1FGT0 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B1DHC5 Two component transcriptional regulator, AraC f...    47   0.002 
UniRef100_B1DGP1 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_C3L7V5 DNA-binding response regulator n=10 Tax=Bacillu...    47   0.002 
UniRef100_A9E4W2 Transcriptional regulator, AraC family protein ...    47   0.002 
UniRef100_A8RQG1 Putative uncharacterized protein n=1 Tax=Clostr...    47   0.002 
UniRef100_A8RFL7 Putative uncharacterized protein n=1 Tax=Eubact...    47   0.002 
UniRef100_A7JZ19 AraC-type DNA-binding domain-containing protein...    47   0.002 
UniRef100_A7JW12 Possible transcriptional regulator n=1 Tax=Mann...    47   0.002 
UniRef100_A7JMV1 Putative uncharacterized protein n=1 Tax=Franci...    47   0.002 
UniRef100_A7JIQ4 Putative uncharacterized protein n=1 Tax=Franci...    47   0.002 
UniRef100_Q14GY1 Transcriptional regulator araC family protein n...    47   0.002 
UniRef100_A6PV24 Helix-turn-helix-domain containing protein, Ara...    47   0.002 
UniRef100_A6PTQ3 Helix-turn-helix-domain containing protein, Ara...    47   0.002 
UniRef100_A6PRF6 Helix-turn-helix-domain containing protein, Ara...    47   0.002 
UniRef100_A6D1A6 Putative uncharacterized protein n=1 Tax=Vibrio...    47   0.002 
UniRef100_A6D0U2 AraC-type DNA-binding domain-containing protein...    47   0.002 
UniRef100_A6C615 Xylose operon regulatory protein n=1 Tax=Planct...    47   0.002 
UniRef100_A6C2Z3 CheY-like receiver domain n=1 Tax=Planctomyces ...    47   0.002 
UniRef100_A5ZVU5 Putative uncharacterized protein n=1 Tax=Rumino...    47   0.002 
UniRef100_A5ZM23 Putative uncharacterized protein n=1 Tax=Rumino...    47   0.002 
UniRef100_A1UXY2 Transcriptional regulator, AraC family n=5 Tax=...    47   0.002 
UniRef100_A5J9E5 Transcriptional regulator, AraC family n=3 Tax=...    47   0.002 
UniRef100_A4IXC5 Transcriptional regulator, AraC family n=3 Tax=...    47   0.002 
UniRef100_A4ERP5 Transcriptional regulator, AraC family protein ...    47   0.002 
UniRef100_A4BCS6 Putative transcriptional regulator protein n=1 ...    47   0.002 
UniRef100_A3YBQ0 Transcriptional Regulator, AraC family protein ...    47   0.002 
UniRef100_A3XRZ2 Probable transcription regulator protein n=1 Ta...    47   0.002 
UniRef100_A3VKB8 Transcriptional regulator, AraC family protein ...    47   0.002 
UniRef100_Q1LKT4 Transcriptional regulator, AraC family n=3 Tax=...    47   0.002 
UniRef100_A3I8V3 DNA-binding response regulator n=1 Tax=Bacillus...    47   0.002 
UniRef100_A3EL68 Transcriptional regulator, AraC/XylS family n=1...    47   0.002 
UniRef100_A2WJJ4 AraC-type DNA-binding domain-containing protein...    47   0.002 
UniRef100_A2WJ09 Helix-turn-helix protein n=1 Tax=Burkholderia d...    47   0.002 
UniRef100_A1ZGA2 Sensor protein n=1 Tax=Microscilla marina ATCC ...    47   0.002 
UniRef100_A0Y864 Transcriptional regulator, AraC family protein ...    47   0.002 
UniRef100_B9TJG8 Ornithine utilization regulator, putative n=1 T...    47   0.002 
UniRef100_UPI0001979C28 two-component response regulator n=1 Tax...    47   0.002 
UniRef100_UPI000196C803 hypothetical protein BRYFOR_01869 n=1 Ta...    47   0.002 
UniRef100_UPI000196C1C8 hypothetical protein BRYFOR_01448 n=1 Ta...    47   0.002 
UniRef100_UPI000196A470 hypothetical protein BACCELL_05341 n=1 T...    47   0.002 
UniRef100_UPI0001969209 hypothetical protein BACCELL_02429 n=1 T...    47   0.002 
UniRef100_UPI000190FAB9 araC family transcriptional regulator n=...    47   0.002 
UniRef100_UPI00016B1388 transcriptional regulator, AraC family p...    47   0.002 
UniRef100_UPI00016AC5F6 transcriptional regulator, AraC family p...    47   0.002 
UniRef100_UPI00016AA6AF transcriptional regulator, AraC family p...    47   0.002 
UniRef100_UPI0001692B7F PobR regulator n=1 Tax=Xanthomonas oryza...    47   0.002 
UniRef100_UPI00005F8C62 COG2207: AraC-type DNA-binding domain-co...    47   0.002 
UniRef100_Q8Z8N3 Hypothetical araC-family transcriptional regula...    47   0.002 
UniRef100_Q89ZY5 Two-component system sensor histidine kinase/re...    47   0.002 
UniRef100_Q896R3 Transcriptional regulatory protein n=1 Tax=Clos...    47   0.002 
UniRef100_Q5QL43 Two-component response regulator n=1 Tax=Geobac...    47   0.002 
UniRef100_Q48MK7 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q48HF9 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q47XU2 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q3KDE5 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q39N64 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q24NA7 Putative uncharacterized protein n=1 Tax=Desulf...    47   0.002 
UniRef100_Q21H00 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q1MF44 Putative AraC family transcriptional regulator ...    47   0.002 
UniRef100_Q1LBV4 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q1I8D9 Putative ranscriptional regulator, AraC family ...    47   0.002 
UniRef100_Q16E45 Transcriptional regulator, AraC family, putativ...    47   0.002 
UniRef100_Q0K5C6 Transcriptional regulator, AraC-family n=1 Tax=...    47   0.002 
UniRef100_Q03TB0 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B8FWU4 Two component transcriptional regulator, AraC f...    47   0.002 
UniRef100_B8CZL9 Response regulator receiver protein n=1 Tax=Hal...    47   0.002 
UniRef100_B5FD18 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B2A194 Two component transcriptional regulator, AraC f...    47   0.002 
UniRef100_B1K9Y2 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B1JBM3 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B1HSI7 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A9MQJ3 Putative uncharacterized protein n=1 Tax=Salmon...    47   0.002 
UniRef100_A9ATI1 AraC family transcriptional regulator n=1 Tax=B...    47   0.002 
UniRef100_A8L3A5 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A8KXI5 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A8ICY3 Transcriptional regulator n=1 Tax=Azorhizobium ...    47   0.002 
UniRef100_A7IJI0 Helix-turn-helix-domain containing protein AraC...    47   0.002 
UniRef100_A6WNI4 Helix-turn-helix-domain containing protein AraC...    47   0.002 
UniRef100_A6TRZ8 Response regulator receiver protein n=1 Tax=Alk...    47   0.002 
UniRef100_A6TE05 Putative ARAC-type regulatory protein n=1 Tax=K...    47   0.002 
UniRef100_A6L7Z3 Putative two-component system response regulato...    47   0.002 
UniRef100_A6KWJ5 Two-component system sensor histidine kinase/re...    47   0.002 
UniRef100_A6KWF7 Sensor protein n=1 Tax=Bacteroides vulgatus ATC...    47   0.002 
UniRef100_A5W6V4 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A4Y070 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A4XWF1 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A4XN10 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_A0KCZ2 Transcriptional regulator, AraC family with ami...    47   0.002 
UniRef100_A0AY65 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_Q3XZY4 Helix-turn-helix, AraC type:Response regulator ...    47   0.002 
UniRef100_C3K4E7 Putative regulatory protein n=1 Tax=Pseudomonas...    47   0.002 
UniRef100_C3JQ48 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_C2HAH7 Response regulator n=1 Tax=Enterococcus faecium...    47   0.002 
UniRef100_C2GRX7 Transcriptional regulator n=3 Tax=Lactobacillus...    47   0.002 
UniRef100_C2E3V0 AraC family DNA-binding protein, response regul...    47   0.002 
UniRef100_C2B0Z6 Putative uncharacterized protein n=1 Tax=Citrob...    47   0.002 
UniRef100_C1WX71 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_C1TZK7 DNA-binding domain-containing protein, AraC-typ...    47   0.002 
UniRef100_C1PBK0 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_C1PAU9 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_C1DEP7 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_C0F189 Putative uncharacterized protein n=1 Tax=Neisse...    47   0.002 
UniRef100_C0E8H9 Putative uncharacterized protein n=1 Tax=Clostr...    47   0.002 
UniRef100_C0D613 Putative uncharacterized protein n=1 Tax=Clostr...    47   0.002 
UniRef100_C0C8B0 Putative uncharacterized protein n=1 Tax=Subdol...    47   0.002 
UniRef100_C0BXS3 Putative uncharacterized protein n=1 Tax=Clostr...    47   0.002 
UniRef100_C0BWJ9 Putative uncharacterized protein n=1 Tax=Clostr...    47   0.002 
UniRef100_C0A2P6 AraC-type DNA-binding domain-containing protein...    47   0.002 
UniRef100_C0A2N9 AraC-type DNA-binding domain-containing protein...    47   0.002 
UniRef100_B9Z8M5 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B9NR79 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B9BWM4 Transcriptional regulator, AraC family n=2 Tax=...    47   0.002 
UniRef100_B9BGF1 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B9AN80 Sensor protein n=1 Tax=Prevotella copri DSM 182...    47   0.002 
UniRef100_B6VVW1 Putative uncharacterized protein n=1 Tax=Bacter...    47   0.002 
UniRef100_B6R8I9 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B6B555 Transcriptional regulator, AraC family n=1 Tax=...    47   0.002 
UniRef100_B3KK09 Response regulator receiver n=1 Tax=Geobacillus...    47   0.002 
UniRef100_B3K9I1 Helix-turn-helix-domain containing protein AraC...    47   0.002 
UniRef100_B3CHJ1 Sensor protein n=1 Tax=Bacteroides intestinalis...    47   0.002 
UniRef100_B3CAP5 Sensor protein n=1 Tax=Bacteroides intestinalis...    47   0.002 
UniRef100_B5Z1Q0 Transcriptional regulator, AraC family n=12 Tax...    47   0.002 

>UniRef100_P37639 HTH-type transcriptional regulator gadX n=6
           Tax=Escherichia coli RepID=GADX_ECOLI
          Length = 274

 Score =  544 bits (1401), Expect = e-153
 Identities = 274/274 (100%), Positives = 274/274 (100%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS
Sbjct: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL
Sbjct: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274



>UniRef100_C1NFE8 Transcriptional regulator GadX n=1 Tax=Escherichia
           sp. 1_1_43 RepID=C1NFE8_9ESCH
          Length = 274

 Score =  542 bits (1396), Expect = e-152
 Identities = 273/274 (99%), Positives = 274/274 (100%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS
Sbjct: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR+YYGMTPTEYQ
Sbjct: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRHYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL
Sbjct: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274



>UniRef100_A7ZT57 Transcriptional regulator GadX n=11
           Tax=Enterobacteriaceae RepID=A7ZT57_ECO24
          Length = 274

 Score =  536 bits (1382), Expect = e-151
 Identities = 270/274 (98%), Positives = 271/274 (98%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV VSRDTLS
Sbjct: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVLVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEALNLHAHKK+SSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALNLHAHKKISSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ L NRDSAASIVAQGNFYGTDRSAEGIRL
Sbjct: 241 ERSAQGLPNRDSAASIVAQGNFYGTDRSAEGIRL 274



>UniRef100_Q83PR0 HTH-type transcriptional regulator gadX n=1
           Tax=Shigella flexneri RepID=GADX_SHIFL
          Length = 274

 Score =  535 bits (1377), Expect = e-150
 Identities = 269/274 (98%), Positives = 271/274 (98%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV VSRDTLS
Sbjct: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVLVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEALNLHAHKK+SSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALNLHAHKKISSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ L NRDSAASIVAQGNFYGT+RSAEGIRL
Sbjct: 241 ERSAQGLPNRDSAASIVAQGNFYGTNRSAEGIRL 274



>UniRef100_Q0SY72 Putative ARAC-type regulatory protein n=1
           Tax=Shigella flexneri 5 str. 8401 RepID=Q0SY72_SHIF8
          Length = 274

 Score =  533 bits (1373), Expect = e-150
 Identities = 267/274 (97%), Positives = 271/274 (98%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV VS+DTLS
Sbjct: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVLVSKDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEALNLHAHKK+SSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALNLHAHKKISSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLEDEHFIPLLLN+LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDEHFIPLLLNILQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ L NRDSAASIVAQGNFYGT+RSAEGIRL
Sbjct: 241 ERSAQGLPNRDSAASIVAQGNFYGTNRSAEGIRL 274



>UniRef100_P58230 HTH-type transcriptional regulator gadX n=12
           Tax=Escherichia coli RepID=GADX_ECO57
          Length = 274

 Score =  533 bits (1372), Expect = e-150
 Identities = 269/274 (98%), Positives = 270/274 (98%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV VSRDTLS
Sbjct: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVLVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLED+HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDDHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ L NRDSAASIVAQGNFYGTD SAEGIRL
Sbjct: 241 ERSAQGLPNRDSAASIVAQGNFYGTDCSAEGIRL 274



>UniRef100_B3WVH6 Transcriptional regulator GadX n=1 Tax=Shigella
           dysenteriae 1012 RepID=B3WVH6_SHIDY
          Length = 274

 Score =  531 bits (1367), Expect = e-149
 Identities = 266/274 (97%), Positives = 270/274 (98%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV VSRDTLS
Sbjct: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVLVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEALNLHAHKK+SSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALNLHAHKKISSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFL+D+HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLDDDHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EEETSYSQLLTECRMQRALQLIVIHGFSIKRVA SCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAASCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ L NRDSAASIVAQGNFYGT+RSAEGIRL
Sbjct: 241 ERSAQGLPNRDSAASIVAQGNFYGTNRSAEGIRL 274



>UniRef100_Q32AZ5 Putative ARAC-type regulatory protein n=1
           Tax=Shigella dysenteriae Sd197 RepID=Q32AZ5_SHIDS
          Length = 274

 Score =  527 bits (1358), Expect = e-148
 Identities = 266/274 (97%), Positives = 268/274 (97%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV VSRDTLS
Sbjct: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVLVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEALNLHAHKKVSSLLVHHC RDIPVFQEV+QLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCGRDIPVFQEVSQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNI HEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIVHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EEETSYSQLLTECRM+RALQLIVIH FSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEETSYSQLLTECRMKRALQLIVIHVFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQRLSNRDSAASIVAQGNFYG D SAEGIRL
Sbjct: 241 ERSAQRLSNRDSAASIVAQGNFYGADCSAEGIRL 274



>UniRef100_B7NEF9 DNA-binding transcriptional dual regulator n=1
           Tax=Escherichia coli UMN026 RepID=B7NEF9_ECOLU
          Length = 274

 Score =  518 bits (1334), Expect = e-145
 Identities = 262/274 (95%), Positives = 265/274 (96%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKC E+F+ VSRDTLS
Sbjct: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCGEHFILVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEAL LHAHKKV SLLVHHC+RDIPVFQEVAQLSQNKNLRYAE LRKRALIFA
Sbjct: 61  LFLPMLKEEALKLHAHKKVPSLLVHHCTRDIPVFQEVAQLSQNKNLRYAETLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLEDE FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDEQFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EEETSYSQLLTECRMQ ALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEETSYSQLLTECRMQHALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ LSNRDSAASIVAQGNFYGTD SAEGIRL
Sbjct: 241 ERSAQGLSNRDSAASIVAQGNFYGTDCSAEGIRL 274



>UniRef100_B1LJ59 Transcriptional regulator GadX n=1 Tax=Escherichia
           coli SMS-3-5 RepID=B1LJ59_ECOSM
          Length = 274

 Score =  506 bits (1304), Expect = e-142
 Identities = 257/274 (93%), Positives = 260/274 (94%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQ LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQI+VDKCVENFV VSRDTLS
Sbjct: 1   MQPLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIQVDKCVENFVLVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEAL LHAHKKV SLLVHHC+RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALKLHAHKKVPSLLVHHCTRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLED  FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDTQFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EE TSYSQLLTECRMQRALQLIVI+G SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEGTSYSQLLTECRMQRALQLIVIYGVSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ L N   AASI AQGNFYGTDRSAEGIRL
Sbjct: 241 ERSAQELPNCGPAASIAAQGNFYGTDRSAEGIRL 274



>UniRef100_Q9EYV5 HTH-type transcriptional regulator gadX n=1
           Tax=Escherichia coli O127:H6 str. E2348/69
           RepID=GADX_ECO27
          Length = 274

 Score =  505 bits (1301), Expect = e-141
 Identities = 256/274 (93%), Positives = 260/274 (94%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQ LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQI+VDKCVENFV VSRDTLS
Sbjct: 1   MQPLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIQVDKCVENFVLVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEAL LHAHKKV SLLVHHC+RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALKLHAHKKVPSLLVHHCTRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLED  FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDTQFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EE TSYSQLLTECRMQRALQLIVI+G SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEGTSYSQLLTECRMQRALQLIVIYGVSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ L N   AAS+ AQGNFYGTDRSAEGIRL
Sbjct: 241 ERSAQELPNCGPAASMAAQGNFYGTDRSAEGIRL 274



>UniRef100_B7NNF0 DNA-binding transcriptional dual regulator n=1
           Tax=Escherichia coli IAI39 RepID=B7NNF0_ECO7I
          Length = 274

 Score =  503 bits (1296), Expect = e-141
 Identities = 256/274 (93%), Positives = 258/274 (94%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQ LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQI+VDKCVENFV VSRDTLS
Sbjct: 1   MQPLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIQVDKCVENFVLVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEAL LHAHKK  SLLVHHC RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALKLHAHKKAPSLLVHHCIRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLED  FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDTKFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EE TSYSQLLTECRMQRALQLIVI+G SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEGTSYSQLLTECRMQRALQLIVIYGVSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ L N   AASI AQGNFYGTDRSAEGIRL
Sbjct: 241 ERSAQELPNCGPAASIAAQGNFYGTDRSAEGIRL 274



>UniRef100_Q8FCI6 HTH-type transcriptional regulator gadX n=5
           Tax=Escherichia RepID=GADX_ECOL6
          Length = 274

 Score =  502 bits (1293), Expect = e-140
 Identities = 255/274 (93%), Positives = 259/274 (94%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQ LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQI+VDKCVENFV VSRDTLS
Sbjct: 1   MQPLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIQVDKCVENFVLVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEAL LH HKKV SLLVHHC+RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALKLHVHKKVPSLLVHHCTRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLED  FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDTQFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EE TSYSQLLTECRMQRALQLIVI+G SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEGTSYSQLLTECRMQRALQLIVIYGVSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ L N  SAAS+ AQG FYGTDRSAEGIRL
Sbjct: 241 ERSAQELPNCGSAASMAAQGIFYGTDRSAEGIRL 274



>UniRef100_Q0TBT8 Transcriptional regulator GadX n=2 Tax=Escherichia
           coli RepID=Q0TBT8_ECOL5
          Length = 274

 Score =  502 bits (1292), Expect = e-140
 Identities = 255/274 (93%), Positives = 259/274 (94%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQ LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQI+VDKCVENFV VSRDTLS
Sbjct: 1   MQPLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIQVDKCVENFVLVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEAL LHAHKKV SLLVHHC+RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALKLHAHKKVPSLLVHHCTRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLED  FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDTQFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EE TSYSQLLTECRMQRALQLIVI+G SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEGTSYSQLLTECRMQRALQLIVIYGVSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ L N   AAS+ AQG FYGTDRSAEGIRL
Sbjct: 241 ERSAQELPNCGPAASMAAQGIFYGTDRSAEGIRL 274



>UniRef100_B7N1G3 DNA-binding transcriptional dual regulator n=1
           Tax=Escherichia coli ED1a RepID=B7N1G3_ECO81
          Length = 274

 Score =  499 bits (1286), Expect = e-140
 Identities = 253/274 (92%), Positives = 258/274 (94%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQ LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQI+VDKCVENFV VSRDT+S
Sbjct: 1   MQPLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIQVDKCVENFVLVSRDTIS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEAL LH HKKV SLLVHHC+RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALKLHVHKKVPSLLVHHCTRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLED  FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDTQFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EE TSYSQLLTECRMQRALQLIVI+G SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEGTSYSQLLTECRMQRALQLIVIYGVSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ L N   AAS+ AQG FYGTDRSAEGIRL
Sbjct: 241 ERSAQELPNCGPAASMAAQGIFYGTDRSAEGIRL 274



>UniRef100_B7MEL8 DNA-binding transcriptional dual regulator n=1
           Tax=Escherichia coli S88 RepID=B7MEL8_ECO45
          Length = 274

 Score =  498 bits (1282), Expect = e-139
 Identities = 254/274 (92%), Positives = 258/274 (94%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQ LHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQI+VDKCVENFV VSRDTLS
Sbjct: 1   MQPLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIQVDKCVENFVLVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEAL LH HKKV SLLVHH +RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALKLHVHKKVPSLLVHHWTRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLSVFLED  FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR
Sbjct: 121 LLSVFLEDTQFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EE TSYSQLLTECRMQRALQLIVI+G SIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ
Sbjct: 181 EEGTSYSQLLTECRMQRALQLIVIYGVSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL 274
           ERSAQ L N  SAAS+ AQG FYGTDRSAEGIRL
Sbjct: 241 ERSAQELPNCGSAASMAAQGIFYGTDRSAEGIRL 274



>UniRef100_B1EID9 HTH-type transcriptional regulator GadX n=1
           Tax=Escherichia albertii TW07627 RepID=B1EID9_9ESCH
          Length = 271

 Score =  395 bits (1014), Expect = e-108
 Identities = 196/262 (74%), Positives = 227/262 (86%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQS  GNCLIAYA+HK ILT VNGE+    G DLVFADA+Q+ V + VEN VF++++TLS
Sbjct: 1   MQSPCGNCLIAYAKHKCILTTVNGEHHRLYGNDLVFADANQVSVPEYVENVVFITKETLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEALNLHAHKK  SL+VHHC+RDIP+FQE+ +LSQNK+LRY+E+LRKRALIFA
Sbjct: 61  LFLPMLKEEALNLHAHKKAPSLIVHHCTRDIPIFQEITRLSQNKHLRYSEILRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LLS+FLED+ FIPLL+N+LQP+MR RVCTVINNNIA EW+LA+IASELLMSPSLLKKKL 
Sbjct: 121 LLSLFLEDKQFIPLLMNILQPSMRVRVCTVINNNIAREWSLAQIASELLMSPSLLKKKLH 180

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           EE TSYSQLLTECRMQRALQLIV+  FSIKR A+SCGY+SVSYFIYVFRNYYG+TPTEYQ
Sbjct: 181 EEGTSYSQLLTECRMQRALQLIVMPEFSIKRTALSCGYNSVSYFIYVFRNYYGLTPTEYQ 240

Query: 241 ERSAQRLSNRDSAASIVAQGNF 262
           ER  +R+ N      I AQ +F
Sbjct: 241 ERVTKRVFNNHLITDITAQESF 262



>UniRef100_Q5G2X8 Putative Arac-type regulatory protein (Fragment)
           n=1 Tax=Citrobacter sp. MY-5 RepID=Q5G2X8_9ENTR
          Length = 170

 Score =  331 bits (848), Expect = 5e-89
 Identities = 167/170 (98%), Positives = 167/170 (98%)

Query: 1   MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLS 60
           MQSLHGNCLIAYAR  YILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFV VSRDTLS
Sbjct: 1   MQSLHGNCLIAYARRGYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVPVSRDTLS 60

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120
           LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA
Sbjct: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFA 120

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170
           LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM
Sbjct: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170



>UniRef100_B7LQH5 HTH-type transcriptional regulator gadX for
           glutamic acid decarboylase and transporter (GadA, gad
           BC) (AraC/XylS family) (Modular protein) n=1
           Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQH5_ESCF3
          Length = 289

 Score =  218 bits (556), Expect = 4e-55
 Identities = 111/227 (48%), Positives = 163/227 (71%), Gaps = 3/227 (1%)

Query: 18  ILTMVNGEYRYFNGGDLVFADASQIRVDKC--VENFVFVSRDTLSLFLPMLKEEALNLHA 75
           ILT  +G       G+L+F D  Q+ +     +EN   +++ T+SL +  L  ++L +H+
Sbjct: 33  ILTFNDGNKITIAPGNLIFVDPRQLTITHYGELENVALITQKTISLLVSALNSDSL-IHS 91

Query: 76  HKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLL 135
           +K  +S  +     DI +F+  A LS   +L  AE LRKR+L+ AL+S+FL+D++FIPLL
Sbjct: 92  YKAHNSPFIIRKCPDIAIFKYAANLSHKSDLSCAEKLRKRSLMLALMSLFLDDQNFIPLL 151

Query: 136 LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRM 195
           + +L P++ TRVC VIN+NIA++W+L  IASELLMSPSLLKKKL+ E+T+YSQLLTECRM
Sbjct: 152 MRILHPDITTRVCAVINSNIANDWSLTLIASELLMSPSLLKKKLQAEQTTYSQLLTECRM 211

Query: 196 QRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
           Q+AL+L+    +++K+ A+ CGY SVSYFI VFR ++G+TPTEYQ++
Sbjct: 212 QQALKLLRCDDYAVKKTAILCGYKSVSYFIAVFRKHFGITPTEYQDK 258



>UniRef100_P10805 Porin thermoregulatory protein envY n=2
           Tax=Escherichia coli K-12 RepID=ENVY_ECOLI
          Length = 253

 Score =  147 bits (372), Expect = 8e-34
 Identities = 77/194 (39%), Positives = 123/194 (63%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           ++R+ ++ +L  L +    +    ++++ ++   SR   VF+  A  S+ +  R  E   
Sbjct: 58  INRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSRPCEAEL 117

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
            RAL+F +LS FLE   FI LL+ +L+ ++R  VC +I ++I H W L  +AS L +SPS
Sbjct: 118 TRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPS 177

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLKKKL+ E TSYSQ++TECRM+ A+Q++++   +I +VA  CGY S SYFI VF+ +YG
Sbjct: 178 LLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYG 237

Query: 234 MTPTEYQERSAQRL 247
           +TP  Y  +  Q++
Sbjct: 238 LTPLNYLAKQRQKV 251



>UniRef100_B1LKF6 Transcriptional regulator, AraC family n=2
           Tax=Escherichia coli RepID=B1LKF6_ECOSM
          Length = 253

 Score =  147 bits (370), Expect = 1e-33
 Identities = 76/194 (39%), Positives = 123/194 (63%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           ++R+ ++ +L  L +    +    ++++ ++   SR   VF+  A  S+ +  +  E   
Sbjct: 58  INRNIINDYLLFLNKNLTCIKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSKPCEAEL 117

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
            RAL+F +LS FLE   FI LL+ +L+ ++R  VC +I ++I H W L  +AS L +SPS
Sbjct: 118 TRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPS 177

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLKKKL+ E TSYSQ++TECRM+ A+Q++++   +I +VA  CGY S SYFI VF+ +YG
Sbjct: 178 LLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYG 237

Query: 234 MTPTEYQERSAQRL 247
           +TP  Y  +  Q++
Sbjct: 238 LTPLNYLAKQRQKV 251



>UniRef100_B3IK21 Transcriptional regulator, AraC family n=1
           Tax=Escherichia coli E110019 RepID=B3IK21_ECOLX
          Length = 253

 Score =  146 bits (369), Expect = 2e-33
 Identities = 76/194 (39%), Positives = 123/194 (63%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           ++R+ ++ +L  L +    +    ++++ ++   SR   VF+  A  S+ +  +  E   
Sbjct: 58  INRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSKPCEAEL 117

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
            RAL+F +LS FLE   FI LL+ +L+ ++R  VC +I ++I H W L  +AS L +SPS
Sbjct: 118 TRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPS 177

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLKKKL+ E TSYSQ++TECRM+ A+Q++++   +I +VA  CGY S SYFI VF+ +YG
Sbjct: 178 LLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYG 237

Query: 234 MTPTEYQERSAQRL 247
           +TP  Y  +  Q++
Sbjct: 238 LTPLNYLAKQRQKV 251



>UniRef100_C3TKG7 Envelope protein EnvY n=15 Tax=Enterobacteriaceae
           RepID=C3TKG7_ECOLX
          Length = 253

 Score =  146 bits (369), Expect = 2e-33
 Identities = 76/194 (39%), Positives = 123/194 (63%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           ++R+ ++ +L  L +    +    ++++ ++   SR   VF+  A  S+ +  +  E   
Sbjct: 58  INRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSKPCEAEL 117

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
            RAL+F +LS FLE   FI LL+ +L+ ++R  VC +I ++I H W L  +AS L +SPS
Sbjct: 118 TRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPS 177

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLKKKL+ E TSYSQ++TECRM+ A+Q++++   +I +VA  CGY S SYFI VF+ +YG
Sbjct: 178 LLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYG 237

Query: 234 MTPTEYQERSAQRL 247
           +TP  Y  +  Q++
Sbjct: 238 LTPLNYLAKQRQKV 251



>UniRef100_B7M4P0 DNA-binding transcriptional activator of porin
           biosynthesis n=1 Tax=Escherichia coli IAI1
           RepID=B7M4P0_ECO8A
          Length = 253

 Score =  146 bits (368), Expect = 2e-33
 Identities = 75/194 (38%), Positives = 123/194 (63%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           ++R+ ++ +L  L +    +    ++++ ++   SR   VF+  A  S+ +  +  E   
Sbjct: 58  INRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSKPCEAEL 117

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
            RAL+F +LS FLE   FI LL+ +L+ ++R  +C +I ++I H W L  +AS L +SPS
Sbjct: 118 TRALLFTVLSNFLEQSRFIALLMYILRSSVRDSICRIIQSDIQHYWNLRIVASSLCLSPS 177

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLKKKL+ E TSYSQ++TECRM+ A+Q++++   +I +VA  CGY S SYFI VF+ +YG
Sbjct: 178 LLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYG 237

Query: 234 MTPTEYQERSAQRL 247
           +TP  Y  +  Q++
Sbjct: 238 LTPLNYLAKQRQKV 251



>UniRef100_Q93GS4 SdiA-regulated gene;putative bacterial regulatory
           helix-turn-helix proteins, araC family n=1
           Tax=Salmonella enterica subsp. enterica serovar
           Typhimurium RepID=Q93GS4_SALTY
          Length = 252

 Score =  145 bits (367), Expect = 3e-33
 Identities = 79/187 (42%), Positives = 111/187 (59%), Gaps = 1/187 (0%)

Query: 52  VFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM 111
           V ++R+TL  F   L  + L  +  K +   LV  C  D      + +L    +  Y E 
Sbjct: 51  VVITRETLCRFARQLDVDVLKFYIPKDIPRYLVQPCPEDSVFRPLMVRLCAGTDNSYGET 110

Query: 112 LRKRA-LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170
             +   L FAL+S F E + F P L   L+ +M  +V TVIN N++  WT+ R+A EL +
Sbjct: 111 GPENPFLTFALVSAFCEQDIFFPFLKTCLKQSMADQVATVINRNVSENWTIHRVAGELYV 170

Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230
           S SLLKKKL+EE TSY+++L ECRM++A +LIV+   ++K+VA  CGY SV YFI  FR 
Sbjct: 171 SVSLLKKKLKEENTSYTRILLECRMKKASELIVMQEGAVKKVAYQCGYSSVPYFISQFRK 230

Query: 231 YYGMTPT 237
           YYG TP+
Sbjct: 231 YYGYTPS 237



>UniRef100_B6I1G5 Putative phage envelope protein n=1
           Tax=Escherichia coli SE11 RepID=B6I1G5_ECOSE
          Length = 253

 Score =  145 bits (365), Expect = 5e-33
 Identities = 75/194 (38%), Positives = 122/194 (62%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           ++R+ ++ +L  L +    +    ++++ ++   SR   VF+  A  S+ +  +  E   
Sbjct: 58  INRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSKPCEAEL 117

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
            R L+F +LS FLE   FI LL+ +L+ ++R  VC +I ++I H W L  +AS L +SPS
Sbjct: 118 TRVLLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPS 177

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLKKKL+ E TSYSQ++TECRM+ A+Q++++   +I +VA  CGY S SYFI VF+ +YG
Sbjct: 178 LLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYG 237

Query: 234 MTPTEYQERSAQRL 247
           +TP  Y  +  Q++
Sbjct: 238 LTPLNYLAKQRQKV 251



>UniRef100_Q9EUG8 SrgC n=1 Tax=Salmonella enterica subsp. enterica
           serovar Enteritidis RepID=Q9EUG8_SALEN
          Length = 248

 Score =  145 bits (365), Expect = 5e-33
 Identities = 79/187 (42%), Positives = 112/187 (59%), Gaps = 1/187 (0%)

Query: 52  VFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM 111
           V ++R+TL  F   L  + L  +  K +   LV  C  D      + +L    +  + E 
Sbjct: 51  VVITRETLCRFARQLDVDVLKFYIPKDIPRYLVQPCPEDSVFRPLMVRLCAGTDNGHGET 110

Query: 112 LRKRA-LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170
             +   L FAL+S F E + F P L   L+ +M  +V TVIN N++  WT+ R+ASEL +
Sbjct: 111 GPENPFLTFALVSAFCEQDIFFPFLKTCLKQSMADQVATVINRNVSENWTIHRVASELYV 170

Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230
           S SLLKKKL+EE TSY+++L ECRM++A +LIV+   ++K+VA  CGY SV YFI  FR 
Sbjct: 171 SVSLLKKKLKEENTSYTRILLECRMKKASELIVMQEGAVKKVAYQCGYSSVPYFISQFRK 230

Query: 231 YYGMTPT 237
           YYG TP+
Sbjct: 231 YYGYTPS 237



>UniRef100_A7ZIU5 Transcriptional regulator, AraC family n=6
           Tax=Escherichia coli RepID=A7ZIU5_ECO24
          Length = 253

 Score =  145 bits (365), Expect = 5e-33
 Identities = 75/194 (38%), Positives = 122/194 (62%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           ++R+ ++ +L  L +    +    ++++ ++   SR   VF+  A  S+ +  +  E   
Sbjct: 58  INRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSKPCEAEL 117

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
            R L+F +LS FLE   FI LL+ +L+ ++R  VC +I ++I H W L  +AS L +SPS
Sbjct: 118 TRVLLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPS 177

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLKKKL+ E TSYSQ++TECRM+ A+Q++++   +I +VA  CGY S SYFI VF+ +YG
Sbjct: 178 LLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYG 237

Query: 234 MTPTEYQERSAQRL 247
           +TP  Y  +  Q++
Sbjct: 238 LTPLNYLAKQRQKV 251



>UniRef100_Q3Z4N0 Envelope protein n=1 Tax=Shigella sonnei Ss046
           RepID=Q3Z4N0_SHISS
          Length = 253

 Score =  144 bits (363), Expect = 8e-33
 Identities = 75/194 (38%), Positives = 122/194 (62%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           ++R+ ++ +L  L +    +    ++++ ++   SR   VF+  A  S+ +  +  E   
Sbjct: 58  INRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSKPCEAEL 117

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
            RAL+F +LS FLE   FI LL+ +L+ ++R  VC +I ++I H W L  +AS L +SPS
Sbjct: 118 TRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPS 177

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLKKKL+ E  SYSQ++TECRM+ A+Q++++   +I +VA  CGY S SYFI VF+ +YG
Sbjct: 178 LLKKKLKNENISYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYG 237

Query: 234 MTPTEYQERSAQRL 247
           +TP  Y  +  Q++
Sbjct: 238 LTPLNYLAKQRQKV 251



>UniRef100_Q0T765 Envelope protein n=2 Tax=Shigella flexneri
           RepID=Q0T765_SHIF8
          Length = 253

 Score =  144 bits (363), Expect = 8e-33
 Identities = 74/194 (38%), Positives = 123/194 (63%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           ++R+ ++ +L  L ++   +    ++++ ++   SR   VF+     S+ ++ +  E   
Sbjct: 58  INRNIINDYLLFLNKKLTCVKPWSRLATPVIACHSRTPEVFRLATNHSKQQSSKPCEAEL 117

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
            RAL+F +LS FLE   FI LL+ +L+ ++R  VC +I ++I H W L  +AS L +SPS
Sbjct: 118 TRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPS 177

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLKKKL+ E TSYSQ++TECRM+ A+Q++++   +I +VA  CGY S SYFI VF+ +Y 
Sbjct: 178 LLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYS 237

Query: 234 MTPTEYQERSAQRL 247
           +TP  Y  +  Q++
Sbjct: 238 LTPLNYLAKQRQKV 251



>UniRef100_B1EKG2 Porin thermoregulatory protein EnvY n=1
           Tax=Escherichia albertii TW07627 RepID=B1EKG2_9ESCH
          Length = 253

 Score =  142 bits (358), Expect = 3e-32
 Identities = 74/186 (39%), Positives = 119/186 (63%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           ++R  +  +L  L +  ++++   ++++ ++   SR   VF+  A  SQ ++ +  E   
Sbjct: 58  INRKVIHDYLLFLNKNLISVNPWPRLAAPVIACHSRTPEVFRLAASHSQQQDCKPCETEL 117

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
            RAL+F +LS FL+   FI LL+ +L+ ++R  V  +I ++I H W+L  +AS L +SPS
Sbjct: 118 TRALLFTVLSNFLDQSRFIALLMYILRSSIRDSVYLIIQSDIQHYWSLRIVASSLCLSPS 177

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLKKKL+ E T+YSQ++T CRM+ A QL+++   +I +VA  CGY S SYFI VF+ +YG
Sbjct: 178 LLKKKLKSENTTYSQIVTHCRMRYAAQLLLMDNRNIAQVAQLCGYSSTSYFISVFKAFYG 237

Query: 234 MTPTEY 239
           MTP  Y
Sbjct: 238 MTPLNY 243



>UniRef100_B7LPV9 Envelope protein; thermoregulation of porin
           biosynthesis n=1 Tax=Escherichia fergusonii ATCC 35469
           RepID=B7LPV9_ESCF3
          Length = 275

 Score =  142 bits (357), Expect = 4e-32
 Identities = 79/210 (37%), Positives = 126/210 (60%), Gaps = 7/210 (3%)

Query: 30  NGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSR 89
           N  ++ F+  S   V       V +S + ++ +L  L +    +    +    L+   SR
Sbjct: 63  NNNNIEFSSMSNTMV-------VHISMEVINDYLLFLNKNLTCVKPWPRQKLPLISCHSR 115

Query: 90  DIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCT 149
              VF  V+ L+Q +     E+   R+L+F +LS FLE   FI LL+ +L+ ++R  VC 
Sbjct: 116 TPEVFGLVSYLNQEEKTTPCEIALNRSLLFTVLSNFLEHSGFIALLMYMLRSSVRDSVCR 175

Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSI 209
           +I ++I H W+L +IAS L +SPSLLKKKL+ E TSYSQ++TECRM+ A + +++   +I
Sbjct: 176 IIQSDIKHYWSLRQIASILCLSPSLLKKKLKNESTSYSQIITECRMRYASKQLLMDDKNI 235

Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            +++  CGY+S SYFI VF+++YG+TP  Y
Sbjct: 236 AQISQMCGYNSTSYFISVFKSFYGVTPMHY 265



>UniRef100_Q6J178 Putative AraC family regulatory protein n=1
           Tax=Edwardsiella ictaluri RepID=Q6J178_EDWIC
          Length = 254

 Score =  141 bits (356), Expect = 6e-32
 Identities = 85/238 (35%), Positives = 135/238 (56%), Gaps = 16/238 (6%)

Query: 18  ILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN------------FVFVSRDTLSLFLPM 65
           +LT  + + R+  G  + F + + + V   VEN             ++VS D +  +L  
Sbjct: 12  VLTEKDTDVRFCEGDIVKFTENNLMLVS--VENDSIDFSTLDSSLILYVSCDLIKDYLHF 69

Query: 66  LKEEALNLH-AHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSV 124
           LK++  +     +     ++  C R   VF+E A  S  +     E  RKR+L FA LS+
Sbjct: 70  LKKDLTHYTPVSRGFPPYMIEPC-RTPYVFREAASHSVMRETNEIEFERKRSLTFAALSI 128

Query: 125 FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEET 184
           FL +  FIP L+ +++ N+ + V  +I N+I   W+L  +AS L +SPS LKKKL+ E+T
Sbjct: 129 FLNNRSFIPFLMRMVRSNISSNVYNMIQNDIHKPWSLTAVASCLCLSPSSLKKKLKNEQT 188

Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
           SYS+++T+CRM+ A++ ++I   +I +V+  CGY S SYFI VF+ YYG+TP  Y  R
Sbjct: 189 SYSKIVTDCRMRYAVEQLLIFNKNISQVSTLCGYSSTSYFISVFKEYYGVTPLNYVHR 246



>UniRef100_C2BBW6 Putative uncharacterized protein n=1
           Tax=Citrobacter youngae ATCC 29220 RepID=C2BBW6_9ENTR
          Length = 253

 Score =  137 bits (345), Expect = 1e-30
 Identities = 77/221 (34%), Positives = 128/221 (57%), Gaps = 11/221 (4%)

Query: 30  NGGDLVFADASQIRVDKCVENF-----------VFVSRDTLSLFLPMLKEEALNLHAHKK 78
           NG + +   A+ + +  C  N            V +SRD +  +L  L ++   +   ++
Sbjct: 23  NGKEAISLKANHMALVACDNNIIDFSSLNNALVVHISRDIIKDYLRFLNKDLSQIPLWQR 82

Query: 79  VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138
            ++ ++        VF+  AQ S  + +   E  R R+L+F +LS FL+ + FI LL+++
Sbjct: 83  SANPVMTAVCLTPDVFRVAAQHSAMETVDEGERERTRSLLFTVLSRFLDSKKFISLLMHM 142

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A
Sbjct: 143 LRSRISDSVYHIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYA 202

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
           +  +++ G +I +V+  CGY+S SYFI VF+ +YGMTP  Y
Sbjct: 203 VNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHY 243



>UniRef100_C1MFP5 HTH-type transcriptional regulator adiY n=1
           Tax=Citrobacter sp. 30_2 RepID=C1MFP5_9ENTR
          Length = 253

 Score =  137 bits (345), Expect = 1e-30
 Identities = 79/221 (35%), Positives = 127/221 (57%), Gaps = 11/221 (4%)

Query: 30  NGGDLVFADASQIRVDKCVENF-----------VFVSRDTLSLFLPMLKEEALNLHAHKK 78
           NG + +   A+ + +  C  N            V +SRD +  +L  L ++   +   ++
Sbjct: 23  NGKEAISLKANHMALVACDNNIIDFSSLNNALVVHISRDIIKDYLRFLNKDLSQIPLWQR 82

Query: 79  VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138
            +S ++        VF+  AQ S    +  AE  R R+L+F +LS FL+ + FI LL+ +
Sbjct: 83  SASPVMTAACLTPDVFRVAAQHSVMDTVNEAERERTRSLLFTVLSRFLDSKKFISLLMYM 142

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A
Sbjct: 143 LRNCISDSVYHIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYA 202

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
           +  +++ G +I +V+  CGY+S SYFI VF+ +YGMTP  Y
Sbjct: 203 VNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHY 243



>UniRef100_B7LL54 DNA-binding transcriptional activator n=1
           Tax=Escherichia fergusonii ATCC 35469 RepID=B7LL54_ESCF3
          Length = 296

 Score =  136 bits (342), Expect = 2e-30
 Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 11/221 (4%)

Query: 30  NGGDLVFADASQIRVDKCVENFV-----------FVSRDTLSLFLPMLKEEALNLHAHKK 78
           NG + V   A+ + +  C  N V            +S D +  +L  L ++       ++
Sbjct: 68  NGKEPVNLKANNMALIACDNNIVDISSLNNELVAHISLDIIKDYLRFLNKDLSQFPLWQR 127

Query: 79  VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138
            ++ L+   S    VF+  AQ S        E  R R+L+F +LS FLE + FIPLL+ +
Sbjct: 128 SATPLLTATSLTPDVFRVAAQHSAKDPENEVEKERTRSLLFTVLSRFLESKKFIPLLMYM 187

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A
Sbjct: 188 LRSCVSDSVYHIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYA 247

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
           +  +++   +I +V+ SCGY+S SYFI VF+ +YGMTP  Y
Sbjct: 248 VNQLLMDDKNISQVSQSCGYNSTSYFIAVFKEFYGMTPLHY 288



>UniRef100_B3IGV8 Transcriptional regulator AdiY n=1 Tax=Escherichia
           coli E110019 RepID=B3IGV8_ECOLX
          Length = 253

 Score =  135 bits (339), Expect = 5e-30
 Identities = 77/228 (33%), Positives = 131/228 (57%), Gaps = 11/228 (4%)

Query: 30  NGGDLVFADASQIRVDKCVENFV-----------FVSRDTLSLFLPMLKEEALNLHAHKK 78
           NG + +   A+ + +  C  N +            +S D +  +L  L ++   + A ++
Sbjct: 23  NGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPAWQR 82

Query: 79  VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138
            ++ ++        VF+  AQ S       +E  R RAL+F +LS FL+ + F+ L++ +
Sbjct: 83  SATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRALLFTVLSRFLDSKKFLSLMMYM 142

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A
Sbjct: 143 LRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYA 202

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246
           +  +++ G +I +V+ SCGY+S SYFI VF+++YGMTP  Y  +  +R
Sbjct: 203 VNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQHRER 250



>UniRef100_B3WYW3 Transcriptional regulator AdiY n=1 Tax=Shigella
           dysenteriae 1012 RepID=B3WYW3_SHIDY
          Length = 232

 Score =  134 bits (336), Expect = 1e-29
 Identities = 76/228 (33%), Positives = 130/228 (57%), Gaps = 11/228 (4%)

Query: 30  NGGDLVFADASQIRVDKCVENFV-----------FVSRDTLSLFLPMLKEEALNLHAHKK 78
           NG + +   A+ + +  C  N +            +S D +  +L  L ++   +   ++
Sbjct: 2   NGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQR 61

Query: 79  VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138
            ++ ++        VF+  AQ S       +E  R RAL+F +LS FL+ + F+ L++ +
Sbjct: 62  SATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRALLFTVLSRFLDSKKFLSLMMYM 121

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A
Sbjct: 122 LRNCVSDNVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYA 181

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246
           +  +++ G +I +V+ SCGY+S SYFI VF+++YGMTP  Y  +  +R
Sbjct: 182 VNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQHRER 229



>UniRef100_P33234 HTH-type transcriptional regulator adiY n=4
           Tax=Escherichia RepID=ADIY_ECOLI
          Length = 253

 Score =  134 bits (336), Expect = 1e-29
 Identities = 76/228 (33%), Positives = 130/228 (57%), Gaps = 11/228 (4%)

Query: 30  NGGDLVFADASQIRVDKCVENFV-----------FVSRDTLSLFLPMLKEEALNLHAHKK 78
           NG + +   A+ + +  C  N +            +S D +  +L  L ++   +   ++
Sbjct: 23  NGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQR 82

Query: 79  VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138
            ++ ++        VF+  AQ S       +E  R RAL+F +LS FL+ + F+ L++ +
Sbjct: 83  SATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRALLFTVLSRFLDSKKFVSLMMYM 142

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A
Sbjct: 143 LRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYA 202

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246
           +  +++ G +I +V+ SCGY+S SYFI VF+++YGMTP  Y  +  +R
Sbjct: 203 VNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQHRER 250



>UniRef100_B7NSS8 DNA-binding transcriptional activator n=1
           Tax=Escherichia coli IAI39 RepID=B7NSS8_ECO7I
          Length = 253

 Score =  133 bits (335), Expect = 2e-29
 Identities = 76/228 (33%), Positives = 130/228 (57%), Gaps = 11/228 (4%)

Query: 30  NGGDLVFADASQIRVDKCVENFV-----------FVSRDTLSLFLPMLKEEALNLHAHKK 78
           NG + +   A+ + +  C  N +            +S D +  +L  L ++   +   ++
Sbjct: 23  NGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQR 82

Query: 79  VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138
            ++ ++        VF+  AQ S       +E  R RAL+F +LS FL+ + F+ L++ +
Sbjct: 83  SATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRALLFTVLSRFLDSKKFLSLMMYM 142

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A
Sbjct: 143 LRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYA 202

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246
           +  +++ G +I +V+ SCGY+S SYFI VF+++YGMTP  Y  +  +R
Sbjct: 203 VNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQHRER 250



>UniRef100_B5BK16 Putative AraC family regulatory protein n=3
           Tax=Salmonella enterica subsp. enterica
           RepID=B5BK16_SALPK
          Length = 253

 Score =  133 bits (335), Expect = 2e-29
 Identities = 80/230 (34%), Positives = 131/230 (56%), Gaps = 15/230 (6%)

Query: 30  NGGDLVFADASQIRVDKCVENFVF-----------VSRDTLSLFLPMLKEEALNLHAHKK 78
           NG + +   A+ + +  C  N +            VSR+ +  +L  L ++  +L   ++
Sbjct: 23  NGKEPISLKANHMAILACENNVIDISSLNSVLVIQVSRNNIKDYLQFLNKDLSHLPVWQR 82

Query: 79  VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138
            +  L+        +F+  A+ S  +        R RAL+F +LS FL+ + FI LL+++
Sbjct: 83  NADPLLTATCLTPDIFRVAARYSAMETPDEIVSERTRALLFTVLSRFLDHKKFISLLMHM 142

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A
Sbjct: 143 LRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSPSLLKKKLKNENTSYSQIITTCRMRYA 202

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY----QERSA 244
           +  +++ G +I +V+  CGY+S SYFI VF+ +YGMTP  Y    +ERSA
Sbjct: 203 VNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRERSA 252



>UniRef100_B4T2J6 Porin thermoregulatory protein EnvY n=3
           Tax=Salmonella enterica RepID=B4T2J6_SALNS
          Length = 253

 Score =  133 bits (335), Expect = 2e-29
 Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 17/231 (7%)

Query: 30  NGGDLVFADASQIRVDKCVENFVF-----------VSRDTLSLFLPMLKEEALNLHA-HK 77
           NG + +   A+ + +  C  N +            VSR+ +  +L  L ++  +L    +
Sbjct: 23  NGKEPISLKANHMAILACENNVIDISSLNSVLVIQVSRNNIKDYLQFLNKDLSHLPVWQR 82

Query: 78  KVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLN 137
               LL  +C     +F+  A+ S  +        R RAL+F +LS FL+ + FI LL++
Sbjct: 83  NADPLLTANCLTP-DIFRVAARYSAMETPDEIVSERTRALLFTVLSRFLDHKKFISLLMH 141

Query: 138 VLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQR 197
           +L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ 
Sbjct: 142 MLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSPSLLKKKLKNENTSYSQIITTCRMRY 201

Query: 198 ALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY----QERSA 244
           A+  +++ G +I +V+  CGY+S SYFI VF+ +YGMTP  Y    +ERSA
Sbjct: 202 AVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRERSA 252



>UniRef100_B4TS80 Porin thermoregulatory protein EnvY n=4
           Tax=Salmonella enterica subsp. enterica
           RepID=B4TS80_SALSV
          Length = 243

 Score =  133 bits (335), Expect = 2e-29
 Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 17/231 (7%)

Query: 30  NGGDLVFADASQIRVDKCVENFVF-----------VSRDTLSLFLPMLKEEALNLHA-HK 77
           NG + +   A+ + +  C  N +            VSR+ +  +L  L ++  +L    +
Sbjct: 13  NGKEPISLKANHMAILACENNVIDISSLNSVLVIQVSRNNIKDYLQFLNKDLSHLPVWQR 72

Query: 78  KVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLN 137
               LL  +C     +F+  A+ S  +        R RAL+F +LS FL+ + FI LL++
Sbjct: 73  NADPLLTANCLTP-DIFRVAARYSAMETPDEIVSERTRALLFTVLSRFLDHKKFISLLMH 131

Query: 138 VLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQR 197
           +L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ 
Sbjct: 132 MLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSPSLLKKKLKNENTSYSQIITTCRMRY 191

Query: 198 ALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY----QERSA 244
           A+  +++ G +I +V+  CGY+S SYFI VF+ +YGMTP  Y    +ERSA
Sbjct: 192 AVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRERSA 242



>UniRef100_A7ZUY6 Transcriptional regulator AdiY n=38
           Tax=Enterobacteriaceae RepID=A7ZUY6_ECO24
          Length = 253

 Score =  133 bits (335), Expect = 2e-29
 Identities = 76/228 (33%), Positives = 130/228 (57%), Gaps = 11/228 (4%)

Query: 30  NGGDLVFADASQIRVDKCVENFV-----------FVSRDTLSLFLPMLKEEALNLHAHKK 78
           NG + +   A+ + +  C  N +            +S D +  +L  L ++   +   ++
Sbjct: 23  NGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQR 82

Query: 79  VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138
            ++ ++        VF+  AQ S       +E  R RAL+F +LS FL+ + F+ L++ +
Sbjct: 83  SATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRALLFTVLSRFLDSKKFLSLMMYM 142

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A
Sbjct: 143 LRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYA 202

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246
           +  +++ G +I +V+ SCGY+S SYFI VF+++YGMTP  Y  +  +R
Sbjct: 203 VNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQHRER 250



>UniRef100_B5NPC4 Porin thermoregulatory protein EnvY n=1
           Tax=Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191 RepID=B5NPC4_SALET
          Length = 243

 Score =  133 bits (334), Expect = 2e-29
 Identities = 77/196 (39%), Positives = 120/196 (61%), Gaps = 6/196 (3%)

Query: 54  VSRDTLSLFLPMLKEEALNLHA-HKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEML 112
           VSR+ +  +L  L ++  +L    +    LL  +C     +F+  A+ S  +        
Sbjct: 48  VSRNNIKDYLQFLNKDLSHLPVWQRNADPLLTANCLTP-DIFRVAARYSAMETPDEIVSE 106

Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172
           R RAL+F +LS FL+ + FI LL+++L+  +   V  +I ++I  +W L+ +AS L +SP
Sbjct: 107 RTRALLFTVLSRFLDHKKFISLLMHMLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSP 166

Query: 173 SLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232
           SLLKKKL+ E TSYSQ++T CRM+ A+  +++ G +I +V+  CGY+S SYFI VF+ +Y
Sbjct: 167 SLLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFY 226

Query: 233 GMTPTEY----QERSA 244
           GMTP  Y    +ERSA
Sbjct: 227 GMTPLHYVSQHRERSA 242



>UniRef100_B5MPV8 Porin thermoregulatory protein EnvY n=1
           Tax=Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29 RepID=B5MPV8_SALET
          Length = 243

 Score =  133 bits (334), Expect = 2e-29
 Identities = 77/196 (39%), Positives = 120/196 (61%), Gaps = 6/196 (3%)

Query: 54  VSRDTLSLFLPMLKEEALNLHA-HKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEML 112
           VSR+ +  +L  L ++  +L    +    LL  +C     +F+  A+ S  +        
Sbjct: 48  VSRNNIKDYLQFLNKDLSHLPVWQRNADPLLTANCLTP-DIFRVAARYSAMETPDEIVSE 106

Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172
           R RAL+F +LS FL+ + FI LL+++L+  +   V  +I ++I  +W L+ +AS L +SP
Sbjct: 107 RTRALLFTVLSRFLDHKKFISLLMHMLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSP 166

Query: 173 SLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232
           SLLKKKL+ E TSYSQ++T CRM+ A+  +++ G +I +V+  CGY+S SYFI VF+ +Y
Sbjct: 167 SLLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFY 226

Query: 233 GMTPTEY----QERSA 244
           GMTP  Y    +ERSA
Sbjct: 227 GMTPLHYVSQHRERSA 242



>UniRef100_B4AA01 Porin thermoregulatory protein EnvY n=1
           Tax=Salmonella enterica subsp. enterica serovar Newport
           str. SL317 RepID=B4AA01_SALNE
          Length = 253

 Score =  133 bits (334), Expect = 2e-29
 Identities = 77/196 (39%), Positives = 120/196 (61%), Gaps = 6/196 (3%)

Query: 54  VSRDTLSLFLPMLKEEALNLHA-HKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEML 112
           VSR+ +  +L  L ++  +L    +    LL  +C     +F+  A+ S  +        
Sbjct: 58  VSRNNIKDYLQFLNKDLSHLPVWQRNADPLLTANCLTP-DIFRVAARYSAMETPDEIVSE 116

Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172
           R RAL+F +LS FL+ + FI LL+++L+  +   V  +I ++I  +W L+ +AS L +SP
Sbjct: 117 RTRALLFTVLSRFLDHKKFISLLMHMLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSP 176

Query: 173 SLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232
           SLLKKKL+ E TSYSQ++T CRM+ A+  +++ G +I +V+  CGY+S SYFI VF+ +Y
Sbjct: 177 SLLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFY 236

Query: 233 GMTPTEY----QERSA 244
           GMTP  Y    +ERSA
Sbjct: 237 GMTPLHYVSQHRERSA 252



>UniRef100_B1EQG2 Transcriptional regulator AdiY n=1 Tax=Escherichia
           albertii TW07627 RepID=B1EQG2_9ESCH
          Length = 253

 Score =  133 bits (334), Expect = 2e-29
 Identities = 76/228 (33%), Positives = 130/228 (57%), Gaps = 11/228 (4%)

Query: 30  NGGDLVFADASQIRVDKCVENFV-----------FVSRDTLSLFLPMLKEEALNLHAHKK 78
           NG + +   A+ + +  C  N +            +S D +  +L  L ++   +   ++
Sbjct: 23  NGKEPISLKANHMALLSCENNIIDISSLNNTLVAHISHDIIKDYLRFLSKDLSQIPVWQR 82

Query: 79  VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138
            +  ++        VF+  A+ S +     +E  R RAL+F +LS FL+ + F+ LL+ +
Sbjct: 83  SAPPILTLPCLMPDVFRVAARYSMSPADTESEKERTRALLFTVLSRFLDSKKFLSLLMYM 142

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A
Sbjct: 143 LRSCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYA 202

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246
           +  +++ G +I +V+ SCGY+S SYFI VF+++YGMTP  Y  +  +R
Sbjct: 203 VNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQHRER 250



>UniRef100_B5R960 Putative AraC family regulatory protein n=1
           Tax=Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91 RepID=B5R960_SALG2
          Length = 253

 Score =  132 bits (333), Expect = 3e-29
 Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 17/231 (7%)

Query: 30  NGGDLVFADASQIRVDKCVENFVF-----------VSRDTLSLFLPMLKEEALNLHA-HK 77
           NG + +   A+ + +  C  N +            VSR+ +  +L  L ++  +L    +
Sbjct: 23  NGKEPISLKANHMAILACENNVIEISSLNSVLVIQVSRNNIKDYLQFLNKDLSHLPVWQR 82

Query: 78  KVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLN 137
               LL  +C     +F+  A+ S  +        R RAL+F +LS FL+ + FI LL++
Sbjct: 83  NADPLLTANCLTP-DIFRVAARYSAMEAPDEIVSERTRALLFTVLSRFLDHKKFISLLMH 141

Query: 138 VLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQR 197
           +L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ 
Sbjct: 142 MLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSPSLLKKKLKNENTSYSQIITTCRMRY 201

Query: 198 ALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY----QERSA 244
           A+  +++ G +I +V+  CGY+S SYFI VF+ +YGMTP  Y    +ERSA
Sbjct: 202 AVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRERSA 252



>UniRef100_B5P6C5 Porin thermoregulatory protein EnvY n=4
           Tax=Salmonella enterica subsp. enterica
           RepID=B5P6C5_SALET
          Length = 253

 Score =  132 bits (333), Expect = 3e-29
 Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 17/231 (7%)

Query: 30  NGGDLVFADASQIRVDKCVENFVF-----------VSRDTLSLFLPMLKEEALNLHA-HK 77
           NG + +   A+ + +  C  N +            VSR+ +  +L  L ++  +L    +
Sbjct: 23  NGKEPISLKANHMAILACENNVIDISSLNSVLVIQVSRNNIKDYLQFLNKDLSHLPVWQR 82

Query: 78  KVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLN 137
               LL  +C     +F+  A+ S  +        R RAL+F +LS FL+ + FI LL++
Sbjct: 83  NADPLLTANCLTP-DIFRVAARYSAMEAPDEIVSERTRALLFTVLSRFLDHKKFISLLMH 141

Query: 138 VLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQR 197
           +L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ 
Sbjct: 142 MLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSPSLLKKKLKNENTSYSQIITTCRMRY 201

Query: 198 ALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY----QERSA 244
           A+  +++ G +I +V+  CGY+S SYFI VF+ +YGMTP  Y    +ERSA
Sbjct: 202 AVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRERSA 252



>UniRef100_B4TED4 Porin thermoregulatory protein EnvY n=5
           Tax=Salmonella enterica subsp. enterica
           RepID=B4TED4_SALHS
          Length = 243

 Score =  132 bits (333), Expect = 3e-29
 Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 17/231 (7%)

Query: 30  NGGDLVFADASQIRVDKCVENFVF-----------VSRDTLSLFLPMLKEEALNLHA-HK 77
           NG + +   A+ + +  C  N +            VSR+ +  +L  L ++  +L    +
Sbjct: 13  NGKEPISLKANHMAILACENNVIDISSLNSVLVIQVSRNNIKDYLQFLNKDLSHLPVWQR 72

Query: 78  KVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLN 137
               LL  +C     +F+  A+ S  +        R RAL+F +LS FL+ + FI LL++
Sbjct: 73  NADPLLTANCLTP-DIFRVAARYSAMEAPDEIVSERTRALLFTVLSRFLDHKKFISLLMH 131

Query: 138 VLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQR 197
           +L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ 
Sbjct: 132 MLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSPSLLKKKLKNENTSYSQIITTCRMRY 191

Query: 198 ALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY----QERSA 244
           A+  +++ G +I +V+  CGY+S SYFI VF+ +YGMTP  Y    +ERSA
Sbjct: 192 AVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRERSA 242



>UniRef100_B3H9N5 Transcriptional regulator AdiY n=1 Tax=Escherichia
           coli B7A RepID=B3H9N5_ECOLX
          Length = 253

 Score =  132 bits (333), Expect = 3e-29
 Identities = 76/228 (33%), Positives = 130/228 (57%), Gaps = 11/228 (4%)

Query: 30  NGGDLVFADASQIRVDKCVENFV-----------FVSRDTLSLFLPMLKEEALNLHAHKK 78
           NG + +   A+ + +  C  N +            +S D +  +L  L ++   +   ++
Sbjct: 23  NGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQR 82

Query: 79  VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138
            ++ ++        VF+  AQ S       +E  R RAL+F +LS FL+ + F+ L++ +
Sbjct: 83  SATPILTLPCLMPDVFRVAAQHSMMPAETESEKERTRALLFTVLSRFLDSKKFLSLMMYM 142

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+  +   V  +I ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A
Sbjct: 143 LRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYA 202

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246
           +  +++ G +I +V+ SCGY+S SYFI VF+++YGMTP  Y  +  +R
Sbjct: 203 VNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQHRER 250



>UniRef100_B5FRG9 Porin thermoregulatory protein EnvY n=1
           Tax=Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853 RepID=B5FRG9_SALDC
          Length = 243

 Score =  132 bits (332), Expect = 3e-29
 Identities = 77/196 (39%), Positives = 120/196 (61%), Gaps = 6/196 (3%)

Query: 54  VSRDTLSLFLPMLKEEALNLHA-HKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEML 112
           VSR+ +  +L  L ++  +L    +    LL  +C     +F+  A+ S  +        
Sbjct: 48  VSRNNIKDYLQFLNKDLSHLPVWQRNADPLLTANCLTP-DIFRVAARYSAMEAPDEIVSE 106

Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172
           R RAL+F +LS FL+ + FI LL+++L+  +   V  +I ++I  +W L+ +AS L +SP
Sbjct: 107 RTRALLFTVLSRFLDHKKFISLLMHMLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSP 166

Query: 173 SLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232
           SLLKKKL+ E TSYSQ++T CRM+ A+  +++ G +I +V+  CGY+S SYFI VF+ +Y
Sbjct: 167 SLLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFY 226

Query: 233 GMTPTEY----QERSA 244
           GMTP  Y    +ERSA
Sbjct: 227 GMTPLHYVSQHRERSA 242



>UniRef100_B3YHW4 Porin thermoregulatory protein EnvY n=1
           Tax=Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188 RepID=B3YHW4_SALET
          Length = 243

 Score =  132 bits (331), Expect = 4e-29
 Identities = 76/196 (38%), Positives = 120/196 (61%), Gaps = 6/196 (3%)

Query: 54  VSRDTLSLFLPMLKEEALNLHA-HKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEML 112
           VSR+ +  +L  L ++  +L    +    LL  +C     +F+  A+ S  +        
Sbjct: 48  VSRNNIKDYLQFLNKDLSHLPVWQRNADPLLTANCLTP-DIFRVAARYSAMETPDEIVSE 106

Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172
           R RAL+F +LS FL+ + FI LL+++L+  +   V  +I ++I  +W L+ +AS L ++P
Sbjct: 107 RTRALLFTVLSRFLDHKKFISLLMHMLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLNP 166

Query: 173 SLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232
           SLLKKKL+ E TSYSQ++T CRM+ A+  +++ G +I +V+  CGY+S SYFI VF+ +Y
Sbjct: 167 SLLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFY 226

Query: 233 GMTPTEY----QERSA 244
           GMTP  Y    +ERSA
Sbjct: 227 GMTPLHYVSQHRERSA 242



>UniRef100_A9MGH0 Putative uncharacterized protein n=1
           Tax=Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- RepID=A9MGH0_SALAR
          Length = 253

 Score =  131 bits (329), Expect = 7e-29
 Identities = 70/186 (37%), Positives = 116/186 (62%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           VSR+ +  +L  L ++  +L   ++  + L+        +F+  A+ S  +      + R
Sbjct: 58  VSRNNIKDYLQFLNKDLSHLPVWQRNDAPLLTAPCLTPDIFRVAARYSAMETKDEITIER 117

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
            R+L+F +LS FL+ + FI LL+++L+  +   V  +I ++I  +W L+ +AS L +SPS
Sbjct: 118 TRSLLFTVLSRFLDHKKFISLLMHMLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSPS 177

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLKKKL+ E TSYSQ++T CRM+ A+  +++ G +I +V+  CGY+S SYFI VF+ +YG
Sbjct: 178 LLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYG 237

Query: 234 MTPTEY 239
           MTP  Y
Sbjct: 238 MTPLHY 243



>UniRef100_Q04819 ORF11 n=1 Tax=Salmonella enterica subsp. enterica
           serovar Typhimurium RepID=Q04819_SALTY
          Length = 259

 Score =  126 bits (316), Expect = 2e-27
 Identities = 70/174 (40%), Positives = 101/174 (58%), Gaps = 1/174 (0%)

Query: 52  VFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEM 111
           V ++R+TL  F   L  + L  +  K +   LV  C  D      + +L    +  Y E 
Sbjct: 51  VVITRETLCRFARQLDVDVLKFYIPKDIPRYLVQPCPEDSVFRPLMVRLCAGTDNSYGET 110

Query: 112 LRKRA-LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170
             +   L FAL+S F E + F P L   L+ +M  +V TVIN N++  WT+ R+A EL +
Sbjct: 111 GPENPFLTFALVSAFCEQDIFFPFLKTCLKQSMADQVATVINRNVSENWTIHRVAGELYV 170

Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           S SLLKKKL+EE TSY+++L ECRM++A +LIV+   ++K+VA  CGY SV  F
Sbjct: 171 SVSLLKKKLKEENTSYTRILLECRMKKASELIVMQEGAVKKVAYQCGYSSVPVF 224



>UniRef100_Q0T4Q2 Putative ARAC-type regulatory protein n=1
           Tax=Shigella flexneri 5 str. 8401 RepID=Q0T4Q2_SHIF8
          Length = 253

 Score =  105 bits (261), Expect = 6e-21
 Identities = 75/262 (28%), Positives = 137/262 (52%), Gaps = 26/262 (9%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +I  +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRIHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTVPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP---- 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P    
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVS 231

Query: 237 TEY--QERSAQRLSNRDSAASI 256
            EY  Q  +     N  SA +I
Sbjct: 232 KEYRCQRHTGMNTGNTMSALAI 253



>UniRef100_B7URN2 Predicted DNA-binding transcriptional activator
           n=1 Tax=Escherichia coli O127:H6 str. E2348/69
           RepID=B7URN2_ECO27
          Length = 253

 Score =  105 bits (261), Expect = 6e-21
 Identities = 74/261 (28%), Positives = 139/261 (53%), Gaps = 23/261 (8%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTVPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY- 239
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P    
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVS 231

Query: 240 QERSAQRLS--NRDSAASIVA 258
           +E   QRL+  N D+  + +A
Sbjct: 232 KEYRCQRLTGMNTDNTMNALA 252



>UniRef100_B7MUS4 Putative DNA-binding transcriptional acfivator,
           AraC-type n=1 Tax=Escherichia coli ED1a
           RepID=B7MUS4_ECO81
          Length = 253

 Score =  104 bits (260), Expect = 7e-21
 Identities = 74/262 (28%), Positives = 137/262 (52%), Gaps = 26/262 (9%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTMPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP---- 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P    
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVS 231

Query: 237 TEY--QERSAQRLSNRDSAASI 256
            EY  Q  +     N+ SA +I
Sbjct: 232 KEYRCQRHTGMNTDNKMSALAI 253



>UniRef100_B7M6J8 Putative AraC-type regulatory protein encoded in
           prophage CP-933H ( transcription regulator) n=1
           Tax=Escherichia coli IAI1 RepID=B7M6J8_ECO8A
          Length = 250

 Score =  103 bits (258), Expect = 1e-20
 Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 20/161 (12%)

Query: 85  HHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMR 144
           +HC+  I +F E                   ++ F  LS F  ++ F   L   L+ +  
Sbjct: 101 NHCAEYIEIFDE-------------------SIAFTCLSAFSSEKQFGVFLFECLK-STE 140

Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVI 204
            +V T+I+ +++  W L  I+S L +S SLLK+KL+EE  S+S+++ + RMQ A  L+  
Sbjct: 141 AKVKTIIHTDLSAPWRLKDISSRLYLSESLLKRKLKEEGVSFSKIILDERMQMAEYLLST 200

Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
             + I +VA  CGY SVSYF YVFR Y+G++P++Y +RS++
Sbjct: 201 RCYPISKVAKVCGYASVSYFTYVFRRYFGVSPSQYSQRSSE 241



>UniRef100_C2DR48 Transcriptional regulator YdeO n=1 Tax=Escherichia
           coli 83972 RepID=C2DR48_ECOLX
          Length = 253

 Score =  103 bits (258), Expect = 1e-20
 Identities = 74/262 (28%), Positives = 137/262 (52%), Gaps = 26/262 (9%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTVPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP---- 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P    
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVS 231

Query: 237 TEY--QERSAQRLSNRDSAASI 256
            EY  Q R+     N  +A +I
Sbjct: 232 KEYRCQRRTGMNTDNTMNALAI 253



>UniRef100_B1LFB7 Transcriptional regulator, AraC family n=2
           Tax=Escherichia coli RepID=B1LFB7_ECOSM
          Length = 253

 Score =  103 bits (257), Expect = 2e-20
 Identities = 74/261 (28%), Positives = 138/261 (52%), Gaps = 23/261 (8%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTVPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY- 239
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P    
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVS 231

Query: 240 QERSAQRLS--NRDSAASIVA 258
           +E   QR +  N D+  S +A
Sbjct: 232 KEYRCQRHTGMNTDNTMSALA 252



>UniRef100_B3XF72 Putative AraC-type regulatory protein encoded in
           prophage CP-933H n=1 Tax=Escherichia coli 101-1
           RepID=B3XF72_ECOLX
          Length = 247

 Score =  103 bits (257), Expect = 2e-20
 Identities = 58/161 (36%), Positives = 92/161 (57%), Gaps = 20/161 (12%)

Query: 85  HHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMR 144
           +HC+  I +F E                   ++ F  LS F  ++ F   L   L+ +  
Sbjct: 98  NHCAEYIEIFDE-------------------SIAFTCLSAFSSEKQFGVFLFGCLK-STG 137

Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVI 204
            +V T+I+ +++  W L  I+S L +S SLLK+KL+EE  S+S++L + RMQ A  L+  
Sbjct: 138 AKVKTIIHTDLSAPWHLKDISSRLYLSESLLKRKLKEEGVSFSKILLDERMQMAEYLLST 197

Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
             + I +VA  CGY SVSYF YVFR Y+G++P++Y +RS++
Sbjct: 198 RCYPISKVAKVCGYASVSYFTYVFRRYFGVSPSQYSQRSSE 238



>UniRef100_B3WXL3 Transcriptional regulator, AraC family n=1
           Tax=Shigella dysenteriae 1012 RepID=B3WXL3_SHIDY
          Length = 253

 Score =  103 bits (257), Expect = 2e-20
 Identities = 74/262 (28%), Positives = 136/262 (51%), Gaps = 26/262 (9%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTMPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP---- 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P    
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVS 231

Query: 237 TEY--QERSAQRLSNRDSAASI 256
            EY  Q  +     N  SA +I
Sbjct: 232 KEYRCQRHTGMNTGNTMSALAI 253



>UniRef100_Q1RBS3 Putative ARAC-type regulatory protein n=1
           Tax=Escherichia coli UTI89 RepID=Q1RBS3_ECOUT
          Length = 253

 Score =  103 bits (256), Expect = 2e-20
 Identities = 68/236 (28%), Positives = 127/236 (53%), Gaps = 20/236 (8%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C I +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSIIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTMPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSP 227



>UniRef100_A7ZLU7 Transcriptional regulator, AraC family n=2
           Tax=Escherichia coli RepID=A7ZLU7_ECO24
          Length = 253

 Score =  103 bits (256), Expect = 2e-20
 Identities = 74/262 (28%), Positives = 136/262 (51%), Gaps = 26/262 (9%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTVPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP---- 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P    
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVS 231

Query: 237 TEY--QERSAQRLSNRDSAASI 256
            EY  Q  +     N  SA +I
Sbjct: 232 KEYRCQSHTGMNTGNTMSALAI 253



>UniRef100_B3IEU7 Transcriptional regulator, AraC family n=1
           Tax=Escherichia coli E110019 RepID=B3IEU7_ECOLX
          Length = 253

 Score =  103 bits (256), Expect = 2e-20
 Identities = 74/262 (28%), Positives = 136/262 (51%), Gaps = 26/262 (9%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYKRHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTVPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP---- 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P    
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVS 231

Query: 237 TEY--QERSAQRLSNRDSAASI 256
            EY  Q  +     N  SA +I
Sbjct: 232 KEYRCQSHTGMNTGNTMSALAI 253



>UniRef100_B5Z1K1 Putative transcription regulator n=11
           Tax=Escherichia coli O157:H7 RepID=B5Z1K1_ECO5E
          Length = 247

 Score =  103 bits (256), Expect = 2e-20
 Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 20/161 (12%)

Query: 85  HHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMR 144
           +HC+  I +F E                   ++ F  LS F  ++ F   L   L+ +  
Sbjct: 98  NHCAEYIEIFDE-------------------SIAFTCLSAFSSEKQFGVFLFGCLK-STG 137

Query: 145 TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVI 204
            +V T+I+ +++  W L  I+S L +S SLLK+KL+EE  S+S+++ + RMQ A  L+  
Sbjct: 138 AKVKTIIHTDLSAPWRLKDISSRLYLSESLLKRKLKEEGVSFSKIILDERMQMAEYLLST 197

Query: 205 HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
             + I +VA  CGY SVSYF YVFR Y+G++P++Y +RS++
Sbjct: 198 RCYPISKVAKVCGYASVSYFTYVFRRYFGVSPSQYSQRSSE 238



>UniRef100_A8A056 Transcriptional regulator, AraC family n=9
           Tax=Enterobacteriaceae RepID=A8A056_ECOHS
          Length = 253

 Score =  103 bits (256), Expect = 2e-20
 Identities = 74/262 (28%), Positives = 136/262 (51%), Gaps = 26/262 (9%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFTENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTVPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP---- 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P    
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVS 231

Query: 237 TEY--QERSAQRLSNRDSAASI 256
            EY  Q  +     N  SA +I
Sbjct: 232 KEYRCQSHTGMNTGNTMSALAI 253



>UniRef100_Q83RF4 HTH-type transcriptional regulator ydeO n=1
           Tax=Shigella flexneri RepID=YDEO_SHIFL
          Length = 253

 Score =  103 bits (256), Expect = 2e-20
 Identities = 74/262 (28%), Positives = 136/262 (51%), Gaps = 26/262 (9%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTVPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP---- 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P    
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVS 231

Query: 237 TEY--QERSAQRLSNRDSAASI 256
            EY  Q  +     N  SA +I
Sbjct: 232 KEYRCQRHTGMNTGNTMSALAI 253



>UniRef100_Q8FHG0 HTH-type transcriptional regulator ydeO n=1
           Tax=Escherichia coli O6 RepID=YDEO_ECOL6
          Length = 253

 Score =  103 bits (256), Expect = 2e-20
 Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 8/146 (5%)

Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176
           L+F+ LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLK
Sbjct: 110 LLFSCLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLK 168

Query: 177 KKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           KKL++E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P
Sbjct: 169 KKLKQEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSP 227

Query: 237 ----TEY--QERSAQRLSNRDSAASI 256
                EY  Q R+     N  +A +I
Sbjct: 228 KRVSKEYRCQRRTGMNTDNTMNALAI 253



>UniRef100_Q32FX4 Putative ARAC-type regulatory protein n=1
           Tax=Shigella dysenteriae Sd197 RepID=Q32FX4_SHIDS
          Length = 259

 Score =  102 bits (255), Expect = 3e-20
 Identities = 67/236 (28%), Positives = 127/236 (53%), Gaps = 20/236 (8%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTMPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSP 227



>UniRef100_C1HKP4 Transcriptional regulator YdeO n=3 Tax=Escherichia
           RepID=C1HKP4_9ESCH
          Length = 253

 Score =  102 bits (255), Expect = 3e-20
 Identities = 67/236 (28%), Positives = 127/236 (53%), Gaps = 20/236 (8%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTMPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSP 227



>UniRef100_B3I6S9 Transcriptional regulator, AraC family n=2
           Tax=Escherichia coli RepID=B3I6S9_ECOLX
          Length = 253

 Score =  102 bits (255), Expect = 3e-20
 Identities = 67/236 (28%), Positives = 127/236 (53%), Gaps = 20/236 (8%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTMPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSP 227



>UniRef100_Q8X4Z9 HTH-type transcriptional regulator ydeO n=12
           Tax=Escherichia coli RepID=YDEO_ECO57
          Length = 253

 Score =  102 bits (255), Expect = 3e-20
 Identities = 67/236 (28%), Positives = 127/236 (53%), Gaps = 20/236 (8%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTMPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFATCKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSP 227



>UniRef100_Q3Z1P3 Putative ARAC-type regulatory protein n=1
           Tax=Shigella sonnei Ss046 RepID=Q3Z1P3_SHISS
          Length = 253

 Score =  102 bits (254), Expect = 4e-20
 Identities = 67/236 (28%), Positives = 127/236 (53%), Gaps = 20/236 (8%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFTENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTVPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSP 227



>UniRef100_B7N4R1 Putative DNA-binding transcriptional acfivator,
           AraC-type n=1 Tax=Escherichia coli UMN026
           RepID=B7N4R1_ECOLU
          Length = 253

 Score =  102 bits (254), Expect = 4e-20
 Identities = 67/236 (28%), Positives = 127/236 (53%), Gaps = 20/236 (8%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTVPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFATCKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSP 227



>UniRef100_B3HU92 Transcriptional regulator, AraC family n=2
           Tax=Escherichia coli RepID=B3HU92_ECOLX
          Length = 253

 Score =  102 bits (254), Expect = 4e-20
 Identities = 67/236 (28%), Positives = 127/236 (53%), Gaps = 20/236 (8%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTVPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N  +AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSP 227



>UniRef100_UPI0001913473 porin thermoregulatory protein EnvY n=2
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           RepID=UPI0001913473
          Length = 97

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/96 (51%), Positives = 70/96 (72%), Gaps = 4/96 (4%)

Query: 153 NNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRV 212
           ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A+  +++ G +I +V
Sbjct: 1   SDIHKDWNLSAVASCLCLSPSLLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQV 60

Query: 213 AVSCGYHSVSYFIYVFRNYYGMTPTEY----QERSA 244
           +  CGY+S SYFI VF+ +YGMTP  Y    +ERSA
Sbjct: 61  SQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRERSA 96



>UniRef100_B7LQH4 GadW HTH-type(AraC-type) transcriptional positive
           regulator of gadA and gadBC, in absence of gadX;
           repressor of gadX n=1 Tax=Escherichia fergusonii ATCC
           35469 RepID=B7LQH4_ESCF3
          Length = 245

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/128 (40%), Positives = 78/128 (60%), Gaps = 1/128 (0%)

Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176
           L F+ LS+F   +  +PLL N +   +  +V  +I+ + +  W L  +A +L  S SL+K
Sbjct: 112 LYFSCLSLFSMHDELVPLLFNSIN-TLSGKVERIISVDTSRRWYLRDVAEKLYTSESLIK 170

Query: 177 KKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           KKL++E TS+S++L   RM RA  L+ ++   +  +A  CGY S SYFI  FR YYG+TP
Sbjct: 171 KKLQDENTSFSKILLASRMARAKTLLELNQMPLTVIAEKCGYSSTSYFINTFRQYYGVTP 230

Query: 237 TEYQERSA 244
            +Y  RSA
Sbjct: 231 HQYSHRSA 238



>UniRef100_P76135 HTH-type transcriptional regulator ydeO n=2
           Tax=Escherichia coli K-12 RepID=YDEO_ECOLI
          Length = 253

 Score =  100 bits (249), Expect = 1e-19
 Identities = 67/236 (28%), Positives = 126/236 (53%), Gaps = 20/236 (8%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENF--VFVSRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFTENTIKKYLQC 64

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIP---VFQEVAQLS--QNKNLRYAEMLRKRALIFA 120
              + + +    K         + ++P   + + +A L+  +  +  ++E+L     +F+
Sbjct: 65  TNIQTVTVPVPAKFLR------ASNVPTGLLNEMIAYLNSEERNHHNFSELL-----LFS 113

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
            LS+F   + FI LL N +  ++  +V  ++N   AH W L  I   L +S SLLKKKL+
Sbjct: 114 CLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKPAHPWKLKDICDCLYISESLLKKKLK 172

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           +E+T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P
Sbjct: 173 QEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSP 227



>UniRef100_B1EID8 HTH-type transcriptional regulator gadW n=1
           Tax=Escherichia albertii TW07627 RepID=B1EID8_9ESCH
          Length = 242

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/132 (39%), Positives = 80/132 (60%), Gaps = 1/132 (0%)

Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176
           L F+ LS+F  ++  IP LLN +   +  +V  +I+ +IA  W L  IA ++  S SL+K
Sbjct: 112 LYFSCLSMFSRNKELIPFLLNSIS-TVSGKVERIISFDIARRWYLRDIAEKMYTSESLIK 170

Query: 177 KKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           KKL++E T +S++L   RM  A +L+ +    +  +A  CGY S SYFI  FR YYG+TP
Sbjct: 171 KKLKDENTCFSKILLTSRMSMARRLLELRQIPLPMIAEKCGYSSTSYFINTFRQYYGITP 230

Query: 237 TEYQERSAQRLS 248
            ++ ++S   LS
Sbjct: 231 HQFAQQSTGMLS 242



>UniRef100_B7N1G2 DNA-binding transcriptional activator n=1
           Tax=Escherichia coli ED1a RepID=B7N1G2_ECO81
          Length = 242

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 49  ENFVFVSRDTLSL---------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ 99
           ++F F S DT  L         +L  +++   NL  H K   L+    ++  P+    A 
Sbjct: 39  DDFAFCSLDTRQLDIEELTVCHYLQNIRQLPRNLGLHSKDRLLI----NQSPPIQLVTAI 94

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
                + R    +  + L  + LS+F   +  IPLL N +   +  +V  +I+ +IA  W
Sbjct: 95  FDSFNDPRVNSPILSKMLYLSCLSMFSHKKELIPLLFNSIS-TVSGKVERLISFDIAKRW 153

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
            L  IA  +  S SL+KKKL++E T +S++L   RM  A +L+ +    +  +A  CGY 
Sbjct: 154 YLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYS 213

Query: 220 SVSYFIYVFRNYYGMTPTEYQERS 243
           S SYFI  FR YYG+TP ++ + S
Sbjct: 214 STSYFINTFRQYYGVTPHQFSQHS 237



>UniRef100_B7UL68 DNA-binding transcriptional activator n=1
           Tax=Escherichia coli O127:H6 str. E2348/69
           RepID=B7UL68_ECO27
          Length = 242

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 49  ENFVFVSRDTLSL---------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ 99
           ++F F S DT  L         +L  +++   NL  H K   L+    ++  P+    A 
Sbjct: 39  DDFAFCSLDTRRLDIEELTVCHYLQNIRQLPRNLGLHSKDRLLI----NQSPPIQLVTAI 94

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
                + R    +  + L  + LS+F   +  IPLL N +   +  +V  +I+ +IA  W
Sbjct: 95  FDSFNDPRVNSPILSKMLYLSCLSMFSHKKELIPLLFNSIS-TVSGKVERLISFDIAKRW 153

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
            L  IA  +  S SL+KKKL++E T +S++L   RM  A +L+ +    +  +A  CGY 
Sbjct: 154 YLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYS 213

Query: 220 SVSYFIYVFRNYYGMTPTEYQERS 243
           S SYFI  FR YYG+TP ++ + S
Sbjct: 214 STSYFINTFRQYYGVTPHQFSQHS 237



>UniRef100_Q8FCI7 HTH-type transcriptional regulator gadW n=8
           Tax=Escherichia RepID=GADW_ECOL6
          Length = 242

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 49  ENFVFVSRDTLSL---------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ 99
           ++F F S DT  L         +L  +++   NL  H K   L+    ++  P+    A 
Sbjct: 39  DDFAFCSLDTRRLDIEELTVCHYLQNIRQLPRNLGLHSKDRLLI----NQSPPIQLVTAI 94

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
                + R    +  + L  + LS+F   +  IPLL N +   +  +V  +I+ +IA  W
Sbjct: 95  FDSFNDPRVNSPILSKMLYLSCLSMFSHKKELIPLLFNSIS-TVSGKVERLISFDIAKRW 153

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
            L  IA  +  S SL+KKKL++E T +S++L   RM  A +L+ +    +  +A  CGY 
Sbjct: 154 YLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYS 213

Query: 220 SVSYFIYVFRNYYGMTPTEYQERS 243
           S SYFI  FR YYG+TP ++ + S
Sbjct: 214 STSYFINTFRQYYGVTPHQFSQHS 237



>UniRef100_B1LJ58 Transcriptional regulator GadW n=1 Tax=Escherichia
           coli SMS-3-5 RepID=B1LJ58_ECOSM
          Length = 242

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 49  ENFVFVSRDTLSL---------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ 99
           ++F F S DT  L         +L  +++   NL  H K   L+    ++  P+    A 
Sbjct: 39  DDFAFCSPDTRRLDIDELTVCHYLQNIRQIPRNLGLHSKDRLLI----NQSPPMPLVTAI 94

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
                + R    +  + L  + LS+F   +  IPLL N +   +  +V  +I+ +IA  W
Sbjct: 95  FDSFNDPRVNSPILSKMLYLSCLSMFSHKKELIPLLFNSIS-TVSGKVERLISFDIAKRW 153

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
            L  IA  +  S SL+KKKL++E T +S++L   RM  A +L+ +    +  +A  CGY 
Sbjct: 154 YLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYS 213

Query: 220 SVSYFIYVFRNYYGMTPTEYQERS 243
           S SYFI  FR YYG+TP ++ + S
Sbjct: 214 STSYFINTFRQYYGVTPHQFAQHS 237



>UniRef100_UPI000190BB07 araC family regulatory protein n=1
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           str. E02-1180 RepID=UPI000190BB07
          Length = 291

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 74/245 (30%), Positives = 126/245 (51%), Gaps = 21/245 (8%)

Query: 9   LIAYARHKYILTMVNGEYRYFNGGDLVFADASQ---IRVDKCVE--NFVFVSRDTLSLFL 63
           LI     K  +T  +GEY   +G  L+F    Q   I +++  E  N+  +  D+ S+  
Sbjct: 41  LIKLTTGKISITTSSGEYITASGPMLIFLAKDQTIHITMEETHEQLNYNLIELDSASI-- 98

Query: 64  PMLKEEALN--LHAHKKVSSLLVHHCSRDI--PVFQEVAQL-----SQNKNLRYAEMLRK 114
               + A N  L+ H   S+ L    ++ +  P+   VA++     S NK+ + ++  +K
Sbjct: 99  ----KNAYNFFLYEHADFSAPLTKPTTKHLLAPIETGVARVFNLLHSSNKSQKLSQD-KK 153

Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174
             LI  LLS F+ +     L   + Q  +   +  +I ++I+ +W L  I+  L MS S 
Sbjct: 154 EYLIRFLLSEFIYEPEAFALFRELSQNTLAENIYNIIISDISRKWALKDISGSLYMSCST 213

Query: 175 LKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234
           LK+KL++E TS+S++    RM +A +L+    ++I RVA  CGY S SYF  VF+ ++  
Sbjct: 214 LKRKLKQEHTSFSEVYLNARMNKATKLLRNSEYNITRVAYMCGYDSASYFTCVFKKHFKT 273

Query: 235 TPTEY 239
           TP+E+
Sbjct: 274 TPSEF 278



>UniRef100_B5Q4B7 AraC family regulatory protein n=1 Tax=Salmonella
           enterica subsp. enterica serovar Virchow str. SL491
           RepID=B5Q4B7_SALVI
          Length = 291

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 74/245 (30%), Positives = 126/245 (51%), Gaps = 21/245 (8%)

Query: 9   LIAYARHKYILTMVNGEYRYFNGGDLVFADASQ---IRVDKCVE--NFVFVSRDTLSLFL 63
           LI     K  +T  +GEY   +G  L+F    Q   I +++  E  N+  +  D+ S+  
Sbjct: 41  LIKLTTGKISITTSSGEYITASGPMLIFLAKDQTIHITMEETHEQLNYNLIELDSASI-- 98

Query: 64  PMLKEEALN--LHAHKKVSSLLVHHCSRDI--PVFQEVAQL-----SQNKNLRYAEMLRK 114
               + A N  L+ H   S+ L    ++ +  P+   VA++     S NK+ + ++  +K
Sbjct: 99  ----KNAYNFFLYEHADFSAPLTKPTTKHLLAPIETGVARVFNLLHSSNKSQKLSQD-KK 153

Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174
             LI  LLS F+ +     L   + Q  +   +  +I ++I+ +W L  I+  L MS S 
Sbjct: 154 EYLIRFLLSEFIYEPEAFALFRELSQNTLAENIYNIIISDISRKWALKDISDSLYMSCST 213

Query: 175 LKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234
           LK+KL++E TS+S++    RM +A +L+    ++I RVA  CGY S SYF  VF+ ++  
Sbjct: 214 LKRKLKQENTSFSEVYLNARMNKATKLLRNSEYNITRVAYMCGYDSASYFTCVFKKHFKT 273

Query: 235 TPTEY 239
           TP+E+
Sbjct: 274 TPSEF 278



>UniRef100_B4T2L5 AraC family regulatory protein n=13 Tax=Salmonella
           enterica subsp. enterica RepID=B4T2L5_SALNS
          Length = 291

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 74/245 (30%), Positives = 126/245 (51%), Gaps = 21/245 (8%)

Query: 9   LIAYARHKYILTMVNGEYRYFNGGDLVFADASQ---IRVDKCVE--NFVFVSRDTLSLFL 63
           LI     K  +T  +GEY   +G  L+F    Q   I +++  E  N+  +  D+ S+  
Sbjct: 41  LIKLTTGKISITTSSGEYITASGPMLIFLAKDQTIHITMEETHEQLNYNLIELDSASI-- 98

Query: 64  PMLKEEALN--LHAHKKVSSLLVHHCSRDI--PVFQEVAQL-----SQNKNLRYAEMLRK 114
               + A N  L+ H   S+ L    ++ +  P+   VA++     S NK+ + ++  +K
Sbjct: 99  ----KNAYNFFLYEHADFSAPLTKPTTKHLLAPIETGVARVFNLLHSSNKSQKLSQD-KK 153

Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174
             LI  LLS F+ +     L   + Q  +   +  +I ++I+ +W L  I+  L MS S 
Sbjct: 154 EYLIRFLLSEFIYEPEAFALFRELSQNTLAENIYNIIISDISRKWALKDISDSLYMSCST 213

Query: 175 LKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234
           LK+KL++E TS+S++    RM +A +L+    ++I RVA  CGY S SYF  VF+ ++  
Sbjct: 214 LKRKLKQENTSFSEVYLNARMNKATKLLRNSEYNITRVAYMCGYDSASYFTCVFKKHFKT 273

Query: 235 TPTEY 239
           TP+E+
Sbjct: 274 TPSEF 278



>UniRef100_B5BK33 AraC family regulatory protein n=8 Tax=Salmonella
           enterica subsp. enterica RepID=B5BK33_SALPK
          Length = 291

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 74/245 (30%), Positives = 126/245 (51%), Gaps = 21/245 (8%)

Query: 9   LIAYARHKYILTMVNGEYRYFNGGDLVFADASQ---IRVDKCVE--NFVFVSRDTLSLFL 63
           LI     K  +T  +GEY   +G  L+F    Q   I +++  E  N+  +  D+ S+  
Sbjct: 41  LIKLTTGKISITTSSGEYITASGPMLIFLAKDQTIHITMEETHEQLNYNLIELDSASI-- 98

Query: 64  PMLKEEALN--LHAHKKVSSLLVHHCSRDI--PVFQEVAQL-----SQNKNLRYAEMLRK 114
               + A N  L+ H   S+ L    ++ +  P+   VA++     S NK+ + ++  +K
Sbjct: 99  ----KNAYNFFLYEHADFSAPLTKPTTKHLLAPIETGVARVFNLLHSSNKSQKLSQD-KK 153

Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174
             LI  LLS F+ +     L   + Q  +   +  +I ++I+ +W L  I+  L MS S 
Sbjct: 154 EYLIRFLLSEFIYEPEAFALFRELSQNTLAENIYNIIISDISRKWALKDISDSLYMSCST 213

Query: 175 LKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234
           LK+KL++E TS+S++    RM +A +L+    ++I RVA  CGY S SYF  VF+ ++  
Sbjct: 214 LKRKLKQEHTSFSEVYLNARMNKATKLLRNSEYNITRVAYMCGYDSASYFTCVFKKHFKT 273

Query: 235 TPTEY 239
           TP+E+
Sbjct: 274 TPSEF 278



>UniRef100_P05052 HTH-type transcriptional regulator appY n=3
           Tax=Escherichia coli RepID=APPY_ECOLI
          Length = 249

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 26/221 (11%)

Query: 43  RVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQ 102
           RV    +N +F+  D +   LP+   +   +   KK         + ++P      + + 
Sbjct: 21  RVISFKKNSLFIVSDKIRRELPVCPSKLRIVDIDKKTCLSFFIDVNNELP-----GKFTL 75

Query: 103 NKNLRYAEMLRKRALIFALL---------SVFLEDEHFIPLLL---------NVLQPNMR 144
           +KN   AE     +L+F+L          S++L++   I LL          + +  N+ 
Sbjct: 76  DKNGYIAEEEPPLSLVFSLFEGIKIADSHSLWLKERLCISLLAMFKKRESVNSFILTNIN 135

Query: 145 TRVCTV---INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201
           T  C +   I+ NI  +W L  IA  +  S SL+KK+LR+E TS++++L + RM+ A +L
Sbjct: 136 TFTCKITGIISFNIERQWHLKDIAELIYTSESLIKKRLRDEGTSFTEILRDTRMRYAKKL 195

Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
           I  + +SI  VA  CGY+S SYFI  F++YYG+TP+ Y E+
Sbjct: 196 ITSNSYSINVVAQKCGYNSTSYFICAFKDYYGVTPSHYFEK 236



>UniRef100_UPI000190B1A4 putative AraC family regulatory protein n=1
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           str. 404ty RepID=UPI000190B1A4
          Length = 107

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/84 (52%), Positives = 64/84 (76%)

Query: 153 NNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRV 212
           ++I  +W L+ +AS L +SPSLLKKKL+ E TSYSQ++T CRM+ A+  +++ G +I +V
Sbjct: 1   SDIHKDWNLSAVASCLCLSPSLLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQV 60

Query: 213 AVSCGYHSVSYFIYVFRNYYGMTP 236
           +  CGY+S SYFI VF+ +YGMTP
Sbjct: 61  SQLCGYNSTSYFISVFKEFYGMTP 84



>UniRef100_B7NEF8 DNA-binding transcriptional activator n=2
           Tax=Escherichia coli RepID=B7NEF8_ECOLU
          Length = 242

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 14/204 (6%)

Query: 49  ENFVFVSRDTLSL---------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ 99
           ++F F S DT  L         +L  +++   NL  H K   LL++  S  +P+   +  
Sbjct: 39  DDFAFCSPDTRRLDIDELTVCHYLQNIRQIPRNLGLHSK-DRLLINQ-SPPMPLVTAIFD 96

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
              +  +     +  + L  + LS+F   +  IPLL N +   +  +V  +I+ +IA  W
Sbjct: 97  SFNDSGVN--SPILSKMLYLSCLSMFSHKKELIPLLFNSIS-TVSGKVERLISFDIAKRW 153

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
            L  IA  +  S SL+KKKL++E T +S++L   RM  A +L+ +    +  +A  CGY 
Sbjct: 154 YLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYS 213

Query: 220 SVSYFIYVFRNYYGMTPTEYQERS 243
           S SYFI  FR YYG+TP ++ + S
Sbjct: 214 STSYFINTFRQYYGVTPHQFAQHS 237



>UniRef100_B5FRI8 AraC family regulatory protein n=1 Tax=Salmonella
           enterica subsp. enterica serovar Dublin str. CT_02021853
           RepID=B5FRI8_SALDC
          Length = 291

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 21/245 (8%)

Query: 9   LIAYARHKYILTMVNGEYRYFNGGDLVFADASQ---IRVDKCVE--NFVFVSRDTLSLFL 63
           LI     K  +T  +GEY   +G  L+F    Q   I +++  E  N+  +  D+ S+  
Sbjct: 41  LIKLTTGKISITTSSGEYITASGPMLIFLAKDQTIHITMEETHEQLNYNLIELDSASI-- 98

Query: 64  PMLKEEALN--LHAHKKVSSLLVHHCSRDI--PVFQEVAQL-----SQNKNLRYAEMLRK 114
               + A N  L+ H   S  L    ++ +  P+   VA++     S NK+ + ++  +K
Sbjct: 99  ----KNAYNFFLYEHADFSDPLTKPTTKHLLAPIETGVARVFNLLHSSNKSQKLSQD-KK 153

Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174
             LI  LLS F+ +     L   + Q  +   +  +I ++I+ +W L  I+  L MS S 
Sbjct: 154 EYLIRFLLSEFIYEPEAFALFRELSQNTLAENIYNIIISDISRKWALKDISDSLYMSCST 213

Query: 175 LKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234
           LK+KL++E TS+S++    RM +A +L+    ++I RVA  CGY S SYF  VF+ ++  
Sbjct: 214 LKRKLKQEHTSFSEVYLNARMNKATKLLRNSEYNITRVAYMCGYDSASYFTCVFKKHFKT 273

Query: 235 TPTEY 239
           TP+E+
Sbjct: 274 TPSEF 278



>UniRef100_Q31VB0 Putative ARAC-type regulatory protein n=1
           Tax=Shigella boydii Sb227 RepID=Q31VB0_SHIBS
          Length = 242

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 49  ENFVFVSRDTLSL---------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ 99
           ++F F S DT  L         +L  +++   NL  H K   LL++  S  +P+   +  
Sbjct: 39  DDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSK-DRLLINQ-SPPMPLVTAIFD 96

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
                 +     +    L  + LS+F   +  IPLL N +   +  +V  +I+ +IA  W
Sbjct: 97  SFNESGVN--SPILSNMLYLSCLSMFSHKKELIPLLFNSIS-TVSGKVERLISFDIAKRW 153

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
            L  IA  +  S SL+KKKL++E T +S++L   RM  A +L+ +    +  +A  CGY 
Sbjct: 154 YLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYS 213

Query: 220 SVSYFIYVFRNYYGMTPTEYQERS 243
           S SYFI  FR YYG+TP ++ + S
Sbjct: 214 STSYFINTFRQYYGVTPHQFAQHS 237



>UniRef100_B7N3S5 Putative araC-type regulatory protein from
           bacteriophage origin n=1 Tax=Escherichia coli UMN026
           RepID=B7N3S5_ECOLU
          Length = 246

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 50/129 (38%), Positives = 81/129 (62%), Gaps = 1/129 (0%)

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
           K +++FA L++   ++ F   L   L  ++ ++V  +I+++I+  W L  I+S L +S S
Sbjct: 111 KNSILFACLAILSSEKMFQSFLFGCLN-SLGSKVKAIIHSDISAAWRLCDISSRLCLSES 169

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLK+KL+ E  S+S+L+ E RM  A +L+  + + + +VA  CGY S SYFI VFR Y+G
Sbjct: 170 LLKRKLKHEGLSFSKLILEERMVMAERLLSYNFYPVGKVAKICGYESASYFISVFRRYFG 229

Query: 234 MTPTEYQER 242
           + P EY  R
Sbjct: 230 VPPHEYSSR 238



>UniRef100_B3WPD9 Transcriptional regulator GadW n=1 Tax=Escherichia
           coli B171 RepID=B3WPD9_ECOLX
          Length = 242

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 49  ENFVFVSRDTLSL---------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ 99
           ++F F S DT  L         +L  +++   NL  H K   LL++  S  +P+   +  
Sbjct: 39  DDFAFCSPDTQRLDIDELTVCHYLQNIRQLPRNLGLHSK-DRLLINQ-SPPMPLVTAIFD 96

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
                 +     +    L  + LS+F   +  IPLL N +   +  +V  +I+ +IA  W
Sbjct: 97  SFNESGVN--SPILSNMLYLSCLSMFSHKKELIPLLFNSIS-TVSGKVERLISFDIAKRW 153

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
            L  IA  +  S SL+KKKL++E T +S++L   RM  A +L+ +    +  +A  CGY 
Sbjct: 154 YLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYS 213

Query: 220 SVSYFIYVFRNYYGMTPTEYQERS 243
           S SYFI  FR YYG+TP ++ + S
Sbjct: 214 STSYFINTFRQYYGVTPHQFAQHS 237



>UniRef100_B2U4I0 Transcriptional regulator GadW n=8
           Tax=Enterobacteriaceae RepID=B2U4I0_SHIB3
          Length = 242

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 49  ENFVFVSRDTLSL---------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ 99
           ++F F S DT  L         +L  +++   NL  H K   LL++  S  +P+   +  
Sbjct: 39  DDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSK-DRLLINQ-SPPMPLVTAIFD 96

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
                 +     +    L  + LS+F   +  IPLL N +   +  +V  +I+ +IA  W
Sbjct: 97  SFNESGVN--SPILSNMLYLSCLSMFSHKKELIPLLFNSIS-TVSGKVERLISFDIAKRW 153

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
            L  IA  +  S SL+KKKL++E T +S++L   RM  A +L+ +    +  +A  CGY 
Sbjct: 154 YLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYS 213

Query: 220 SVSYFIYVFRNYYGMTPTEYQERS 243
           S SYFI  FR YYG+TP ++ + S
Sbjct: 214 STSYFINTFRQYYGVTPHQFAQHS 237



>UniRef100_P63202 HTH-type transcriptional regulator gadW n=21
           Tax=Enterobacteriaceae RepID=GADW_ECO57
          Length = 242

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 49  ENFVFVSRDTLSL---------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ 99
           ++F F S DT  L         +L  +++   NL  H K   LL++  S  +P+   +  
Sbjct: 39  DDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSK-DRLLINQ-SPPMPLVTAIFD 96

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
                 +     +    L  + LS+F   +  IPLL N +   +  +V  +I+ +IA  W
Sbjct: 97  SFNESGVN--SPILSNMLYLSCLSMFSHKKELIPLLFNSIS-TVSGKVERLISFDIAKRW 153

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
            L  IA  +  S SL+KKKL++E T +S++L   RM  A +L+ +    +  +A  CGY 
Sbjct: 154 YLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYS 213

Query: 220 SVSYFIYVFRNYYGMTPTEYQERS 243
           S SYFI  FR YYG+TP ++ + S
Sbjct: 214 STSYFINTFRQYYGVTPHQFAQHS 237



>UniRef100_Q8ZKC9 Putative AraC-type DNA-binding domain-containing
           protein n=1 Tax=Salmonella enterica subsp. enterica
           serovar Typhimurium RepID=Q8ZKC9_SALTY
          Length = 291

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 21/245 (8%)

Query: 9   LIAYARHKYILTMVNGEYRYFNGGDLVFADASQ---IRVDKCVE--NFVFVSRDTLSLFL 63
           LI     K  +T  +GEY   +G  L+F    Q   I +++  E  N+  +  D+ S+  
Sbjct: 41  LIKLTTGKISITTSSGEYITASGPMLIFLAKDQTIHITMEETHEQLNYNLIELDSASI-- 98

Query: 64  PMLKEEALN--LHAHKKVSSLLVHHCSRDI--PVFQEVAQL-----SQNKNLRYAEMLRK 114
               + A N  L+ H   S+ L    ++ +  P+   VA++     S NK+ + ++  +K
Sbjct: 99  ----KNAYNFFLYEHADFSAPLTKPTTKHLLAPIETGVARVFNLLHSSNKSQKLSQD-KK 153

Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174
             LI  LLS F+ +     L   + Q  +   +  +I ++I+ +W L  I+  L MS S 
Sbjct: 154 EYLIRFLLSEFIYEPEAFALFRELSQNTLAENIYNIIISDISRKWALKDISDSLYMSCST 213

Query: 175 LKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234
           LK+KL++E TS+S++    RM +A +L     ++I RVA  CGY S SYF  VF+ ++  
Sbjct: 214 LKRKLKQEHTSFSEVYLNARMNKATKLPRNSEYNITRVAYMCGYDSASYFTCVFKKHFKT 273

Query: 235 TPTEY 239
           TP+E+
Sbjct: 274 TPSEF 278



>UniRef100_C0Q589 AraC family regulatory protein n=2 Tax=Salmonella
           enterica RepID=C0Q589_SALPC
          Length = 291

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 21/245 (8%)

Query: 9   LIAYARHKYILTMVNGEYRYFNGGDLVFADASQ---IRVDKCVE--NFVFVSRDTLSLFL 63
           LI     K  +T  +GEY   +G  L+F    Q   I +++  E  N+  +  D+ S+  
Sbjct: 41  LIKLTTGKISITTSSGEYITASGPMLIFLAKDQTIHITMEETHEQLNYNLIELDSASI-- 98

Query: 64  PMLKEEALN--LHAHKKVSSLLVHHCSRDI--PVFQEVAQL-----SQNKNLRYAEMLRK 114
               + A N  L+ H   S+ L    ++ +  P+   VA++     S NK+ + ++  +K
Sbjct: 99  ----KNAYNFFLYEHADFSAPLTKPTTKHLLAPIETGVARVFNLLHSSNKSQKLSQD-KK 153

Query: 115 RALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSL 174
             LI  LLS F+ +     L   + Q  +   +  +I ++I+ +W L  I+  L MS S 
Sbjct: 154 EYLIRFLLSEFIYEPEAFALFRELSQNTLAENIYNIIISDISRKWALKDISDSLYMSCST 213

Query: 175 LKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234
           LK+KL+ E TS+S++    RM +A +L+    ++I RVA  CGY S SYF  VF+ ++  
Sbjct: 214 LKRKLKLENTSFSEVYLNARMNKATKLLRNSEYNITRVAYMCGYDSASYFTCVFKKHFKT 273

Query: 235 TPTEY 239
           TP+E+
Sbjct: 274 TPSEF 278



>UniRef100_Q93SE2 Putative uncharacterized protein n=1
           Tax=Escherichia coli RepID=Q93SE2_ECOLX
          Length = 245

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 36/233 (15%)

Query: 20  TMVNGEYRYFNGGDLVFAD-------------ASQIRVDKCVENFVFVSRDTLSLFLPML 66
           T + G+  +F   D++  D              +++R+D+C+      S D +       
Sbjct: 15  TEIAGKKLFFQKNDVLLTDNISQSFFLRHPGNVTELRIDECIVRKYMESADRIQ------ 68

Query: 67  KEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ-LSQNKNL--RYAEMLRKRALIFALLS 123
                  H+   VS   +      I +   V Q LS  K L  +++E +      FA LS
Sbjct: 69  -------HSDSAVSVPFIKTTFSHIALLHNVMQNLSLQKTLPQQFSEQM-----FFACLS 116

Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE 183
           +F     F+ LL   +  ++  +V  +I ++ +  W +  I++ L MS SLLK+KL+EE+
Sbjct: 117 IFSTHRGFMFLLFRCIN-SVALKVRYIICSSPSRAWRVKDISNSLYMSESLLKRKLQEEK 175

Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
            S+SQ+L + RM  A QLI     S+ ++A+ CGY S  YFI VFR Y+G+TP
Sbjct: 176 VSFSQILLDIRMHNARQLI-SSKLSVNQIAIRCGYASTPYFISVFREYFGITP 227



>UniRef100_A7ZT55 Transcriptional regulator GadW n=1 Tax=Escherichia
           coli E24377A RepID=A7ZT55_ECO24
          Length = 242

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 16/205 (7%)

Query: 49  ENFVFVSRDTLSL---------FLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ 99
           ++F F S DT  L         +L  +++   NL  H K   L+       +P    V  
Sbjct: 39  DDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLI-----NQLPPMPLVTA 93

Query: 100 LSQNKNLRYAEM-LRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHE 158
           +  + N       +    L  + LS+F   +  IPLL N +   +  +V  +I+ +IA  
Sbjct: 94  IFDSFNESGVNSPILSNMLYLSCLSMFSHKKELIPLLFNSIS-TVSGKVERLISFDIAKR 152

Query: 159 WTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218
           W L  IA  +  S SL+KKKL++E T +S++L   RM  A +L+ +    +  +A  CGY
Sbjct: 153 WYLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGY 212

Query: 219 HSVSYFIYVFRNYYGMTPTEYQERS 243
            S SYFI  FR YYG+TP ++ + S
Sbjct: 213 SSTSYFINTFRQYYGVTPHQFAQHS 237



>UniRef100_B3WVH7 Transcriptional regulator GadW n=1 Tax=Shigella
           dysenteriae 1012 RepID=B3WVH7_SHIDY
          Length = 242

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 49  ENFVFVSRD---------TLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQ 99
           ++F F S D         T+  +L  +++   NL  H K   LL++  S  +P+   +  
Sbjct: 39  DDFAFCSPDMRRLDIDELTVCHYLQNIRQLPRNLGLHSK-DRLLINQ-SPPMPLVTAIFD 96

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
                 +     +    L  + LS+F   +  IPLL N +   +  +V  +I+ +IA  W
Sbjct: 97  SFNESGVN--SPILSNMLYLSCLSMFSHKKELIPLLFNSIS-TVSGKVERLISFDIAKRW 153

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
            L  IA  +  S SL+KKKL++E T +S++L   RM  A +L+ +    +  +A  CGY 
Sbjct: 154 YLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYS 213

Query: 220 SVSYFIYVFRNYYGMTPTEYQERS 243
           S SYFI  FR YYG+TP ++ + S
Sbjct: 214 STSYFINTFRQYYGVTPHQFAQHS 237



>UniRef100_A9MFU3 Putative uncharacterized protein n=1
           Tax=Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- RepID=A9MFU3_SALAR
          Length = 291

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 1/139 (0%)

Query: 101 SQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWT 160
           + NKN +  +  +K+ LI  LLS F+ +     L   + Q ++   +  +I ++I+ +WT
Sbjct: 141 TSNKNQKLPQD-KKQYLIRFLLSEFISEPEAFSLFRELSQNSVAENIYNIIISDISRKWT 199

Query: 161 LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHS 220
           L  I+  L MS S LK+KL++E TS+S++    RM +A +L+    +++ RVA  CGY S
Sbjct: 200 LKDISDSLYMSCSTLKRKLKQENTSFSEVYLNARMNKAAKLLRNSEYNVTRVAYMCGYDS 259

Query: 221 VSYFIYVFRNYYGMTPTEY 239
            SYF  VF+ ++  TP+E+
Sbjct: 260 ASYFTCVFKKHFKTTPSEF 278



>UniRef100_B8Y8G0 Invasion protein HilD n=1 Tax=Salmonella enterica
           subsp. salamae serovar Sofia RepID=B8Y8G0_SALCH
          Length = 309

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 53/153 (34%), Positives = 82/153 (53%), Gaps = 4/153 (2%)

Query: 87  CSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTR 146
           C+RD     +      N+N    E L    L+F LL+ FL       ++L+  Q  +R R
Sbjct: 155 CTRDT---SKGCSKCNNQNCIENEELIPYFLLF-LLTAFLRLPESYEIILSSAQITLRER 210

Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHG 206
           V  +I ++   +W L  +A+ + MS S LK+KL EE TS+S +    RM +A +L+ I  
Sbjct: 211 VYNIIYSSPGRQWKLTDVAAHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGN 270

Query: 207 FSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            ++  VA+ CGY S SYFI  F+ Y+  TP+ +
Sbjct: 271 HNVNAVALKCGYDSTSYFIQCFKKYFKTTPSTF 303



>UniRef100_B5NNQ3 Transcriptional regulator HilD n=1 Tax=Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191
           RepID=B5NNQ3_SALET
          Length = 309

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 1/137 (0%)

Query: 103 NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162
           NK+    E L    L+F LL+ FL       ++L+  Q  ++ RV  +I+++ + +W L 
Sbjct: 168 NKSCIENEELIPYFLLF-LLTAFLRLPESYEIILSSAQITLKERVYNIISSSPSRQWKLT 226

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
            +A  + MS S LK+KL EE TS+S +    RM +A +L+ I   ++  VA++CGY S S
Sbjct: 227 DVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALTCGYDSTS 286

Query: 223 YFIYVFRNYYGMTPTEY 239
           YFI  F+ Y+  TP+ +
Sbjct: 287 YFIQCFKKYFKTTPSTF 303



>UniRef100_UPI0001913103 AraC-family transcriptional regulator n=1
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           str. M223 RepID=UPI0001913103
          Length = 309

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 1/137 (0%)

Query: 103 NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162
           NK+    E L    L+F LL+ FL       ++L+  Q  ++ RV  +I+++ + +W L 
Sbjct: 168 NKSCIENEELIPYFLLF-LLTAFLRLPESYEIILSSAQITLKERVYNIISSSPSRQWKLT 226

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
            +A  + MS S LK+KL EE TS+S +    RM +A +L+ I   ++  VA+ CGY S S
Sbjct: 227 DVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTS 286

Query: 223 YFIYVFRNYYGMTPTEY 239
           YFI  F+ Y+  TP+ +
Sbjct: 287 YFIQCFKKYFKTTPSTF 303



>UniRef100_Q8Z498 AraC-family transcriptional regulator n=1
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           RepID=Q8Z498_SALTI
          Length = 309

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 1/137 (0%)

Query: 103 NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162
           NK+    E L    L+F LL+ FL       ++L+  Q  ++ RV  +I+++ + +W L 
Sbjct: 168 NKSCIENEELIPYFLLF-LLTAFLRLPESYEIILSSAQITLKKRVYNIISSSPSRQWKLT 226

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
            +A  + MS S LK+KL EE TS+S +    RM +A +L+ I   ++  VA+ CGY S S
Sbjct: 227 DVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTS 286

Query: 223 YFIYVFRNYYGMTPTEY 239
           YFI  F+ Y+  TP+ +
Sbjct: 287 YFIQCFKKYFKTTPSTF 303



>UniRef100_B4TFR7 Transcriptional regulator HilD n=3 Tax=Salmonella
           enterica subsp. enterica RepID=B4TFR7_SALHS
          Length = 309

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 1/137 (0%)

Query: 103 NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162
           NK+    E L    L+F LL+ FL       ++L+  Q  ++ RV  +I+++ + +W L 
Sbjct: 168 NKSCIENEELIPYFLLF-LLTAFLRLPESYEIILSSAQITLKERVYNIISSSPSRQWKLT 226

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
            +A  + MS S LK+KL EE TS+S +    RM +A +L+ I   ++  VA+ CGY S S
Sbjct: 227 DVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTS 286

Query: 223 YFIYVFRNYYGMTPTEY 239
           YFI  F+ Y+  TP+ +
Sbjct: 287 YFIQCFKKYFKTTPSTF 303



>UniRef100_B5NBK6 Transcriptional regulator HilD n=1 Tax=Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433 RepID=B5NBK6_SALET
          Length = 309

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 1/137 (0%)

Query: 103 NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162
           NK+    E L    L+F LL+ FL       ++L+  Q  ++ RV  +I+++ + +W L 
Sbjct: 168 NKSCIENEELIPYFLLF-LLTAFLRLPESYEIILSSAQITLKERVYNIISSSPSRQWKLT 226

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
            +A  + MS S LK+KL EE TS+S +    RM +A +L+ I   ++  VA+ CGY S S
Sbjct: 227 DVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTS 286

Query: 223 YFIYVFRNYYGMTPTEY 239
           YFI  F+ Y+  TP+ +
Sbjct: 287 YFIQCFKKYFKTTPSTF 303



>UniRef100_B5N503 Transcriptional regulator HilD n=1 Tax=Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701 RepID=B5N503_SALET
          Length = 309

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 1/137 (0%)

Query: 103 NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162
           NK+    E L    L+F LL+ FL       ++L+  Q  ++ RV  +I+++ + +W L 
Sbjct: 168 NKSCIENEELIPYFLLF-LLTAFLRLPESYEIILSSAQITLKERVYNIISSSPSRQWKLT 226

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
            +A  + MS S LK+KL EE TS+S +    RM +A +L+ I   ++  VA+ CGY S S
Sbjct: 227 DVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTS 286

Query: 223 YFIYVFRNYYGMTPTEY 239
           YFI  F+ Y+  TP+ +
Sbjct: 287 YFIQCFKKYFKTTPSTF 303



>UniRef100_B4T404 Transcriptional regulator HilD n=4 Tax=Salmonella
           enterica RepID=B4T404_SALNS
          Length = 309

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 1/137 (0%)

Query: 103 NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162
           NK+    E L    L+F LL+ FL       ++L+  Q  ++ RV  +I+++ + +W L 
Sbjct: 168 NKSCIENEELIPYFLLF-LLTAFLRLPESYEIILSSAQITLKERVYNIISSSPSRQWKLT 226

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
            +A  + MS S LK+KL EE TS+S +    RM +A +L+ I   ++  VA+ CGY S S
Sbjct: 227 DVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTS 286

Query: 223 YFIYVFRNYYGMTPTEY 239
           YFI  F+ Y+  TP+ +
Sbjct: 287 YFIQCFKKYFKTTPSTF 303



>UniRef100_P41782 Transcriptional regulator hilD n=13 Tax=Salmonella
           enterica subsp. enterica RepID=HILD_SALTY
          Length = 309

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 1/137 (0%)

Query: 103 NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162
           NK+    E L    L+F LL+ FL       ++L+  Q  ++ RV  +I+++ + +W L 
Sbjct: 168 NKSCIENEELIPYFLLF-LLTAFLRLPESYEIILSSAQITLKERVYNIISSSPSRQWKLT 226

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
            +A  + MS S LK+KL EE TS+S +    RM +A +L+ I   ++  VA+ CGY S S
Sbjct: 227 DVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTS 286

Query: 223 YFIYVFRNYYGMTPTEY 239
           YFI  F+ Y+  TP+ +
Sbjct: 287 YFIQCFKKYFKTTPSTF 303



>UniRef100_B5MK53 Transcriptional regulator HilD n=1 Tax=Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29
           RepID=B5MK53_SALET
          Length = 309

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 1/137 (0%)

Query: 103 NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162
           NK+    E L    L+F LL+ FL       ++L+  Q  ++ RV  +++++ + +W L 
Sbjct: 168 NKSCIENEELIPYFLLF-LLTAFLRLPESYEIILSSAQITLKERVYNILSSSPSRQWKLT 226

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
            +A  + MS S LK+KL EE TS+S +    RM +A +L+ I   ++  VA+ CGY S S
Sbjct: 227 DVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTS 286

Query: 223 YFIYVFRNYYGMTPTEY 239
           YFI  F+ Y+  TP+ +
Sbjct: 287 YFIQCFKKYFKTTPSTF 303



>UniRef100_B5FT26 Transcriptional regulator HilD n=1 Tax=Salmonella
           enterica subsp. enterica serovar Dublin str. CT_02021853
           RepID=B5FT26_SALDC
          Length = 309

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 1/137 (0%)

Query: 103 NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162
           NK+    E L    L+F LL+ FL       ++L+  Q  ++ RV  +I+++ + +W L 
Sbjct: 168 NKSCIENEELIPYFLLF-LLTAFLRLPESYEIILSSAQITLKERVYNIISSSPSRQWKLT 226

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
            +A  + MS S LK+KL EE T++S +    RM +A +L+ I   ++  VA+ CGY S S
Sbjct: 227 DVADHIFMSTSTLKRKLAEEGTNFSDIYLSARMNQAAKLLRIGNHNVNSVALKCGYDSTS 286

Query: 223 YFIYVFRNYYGMTPTEY 239
           YFI  F+ Y+  TP+ +
Sbjct: 287 YFIQCFKKYFKTTPSTF 303



>UniRef100_A9MF99 Putative uncharacterized protein n=1
           Tax=Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- RepID=A9MF99_SALAR
          Length = 309

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 44/119 (36%), Positives = 69/119 (57%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LL+ FL       ++L+  Q  ++ RV  +I+++   +W L  IA  + MS S LK+KL 
Sbjct: 185 LLTAFLRLPESYEIILSSAQITLKERVYNIISSSPGRQWKLPDIADNIFMSTSTLKRKLA 244

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
           EE TS+S +    RM +A +L+ I   ++  VA+ CGY S SYFI  F+ Y+  TP+ +
Sbjct: 245 EEGTSFSDIYLSARMNQAAKLLRIGNHNVNSVALKCGYDSTSYFIQCFKKYFKTTPSTF 303



>UniRef100_B7LNC5 Putative araC-type regulatory protein from
           bacteriophage origin n=1 Tax=Escherichia fergusonii ATCC
           35469 RepID=B7LNC5_ESCF3
          Length = 246

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 63/220 (28%), Positives = 110/220 (50%), Gaps = 16/220 (7%)

Query: 33  DLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIP 92
           D++F   S + +D  +++F   + D + +    +  E   ++   K ++L      R  P
Sbjct: 25  DILFKKGSAVLIDYNLKDFFSSNIDHVMI----VDVEEKTVNDFFKSNTLSPFSVRRFYP 80

Query: 93  VFQ--EVAQLSQNKNL--------RYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPN 142
            +   E    S  KNL        R  + +R +  +  L    L  E  +   L     +
Sbjct: 81  AYLMVECEDFSLLKNLIACLNCDGRTVDFVRNQISLACL--AILSSEKIVQSFLFGCLNS 138

Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLI 202
           + ++V  +I+ +I+  W L  I+S L +S SLLK+KL+ E  S+S+L+ E RM  A +L+
Sbjct: 139 LGSKVKAIIHTDISAAWRLCDISSRLYLSESLLKRKLKHEGLSFSKLILEERMVMAERLL 198

Query: 203 VIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
             + +S+ +VA  CGY + SYF+ VFR Y+G+ P +Y  R
Sbjct: 199 SYNLYSVGKVAEICGYENTSYFVSVFRRYFGVPPHQYSSR 238



>UniRef100_A8A0B4 Putative transcriptional regulator, AraC family
           n=2 Tax=Escherichia coli RepID=A8A0B4_ECOHS
          Length = 237

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 47/129 (36%), Positives = 77/129 (59%), Gaps = 1/129 (0%)

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
           +  +  A L+V L  E  +   L     ++  +V  +I+++I+  W L  I+S L MS S
Sbjct: 108 RNQISLACLAV-LSSEKIVQSFLFGSLNSLGCKVKAIIHSDISASWRLCDISSRLYMSES 166

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           LLK+KL++E  S+S+L+ E RM  A +L++    ++ +VA  CGY + SYF+ VFR Y+G
Sbjct: 167 LLKRKLKDEGLSFSKLILEERMMMAQRLLIYSNHTVGKVAGICGYDNASYFVSVFRGYFG 226

Query: 234 MTPTEYQER 242
           + P +Y  R
Sbjct: 227 VPPHQYLSR 235



>UniRef100_B5YTX9 Putative envelope protein encoded within prophage
           CP-933N n=12 Tax=Escherichia coli RepID=B5YTX9_ECO5E
          Length = 195

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 54/127 (42%), Positives = 72/127 (56%), Gaps = 3/127 (2%)

Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176
           L+ A LS+F  DE  +  L   L  ++  +V  +I  +I+  WTL  IA  L MS SLLK
Sbjct: 66  LMMACLSLFESDERILLFLSGCLS-SISAKVRAIIQTDISASWTLGAIALRLHMSESLLK 124

Query: 177 KKLREEETSYSQLLTECRMQRALQLIVI-HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235
            KL+ E   +S+LL E RM+ A+ ++   HG+  + VA  CGY S SYFI VF  YYG  
Sbjct: 125 IKLKNEGHMFSRLLLEERMRVAVNMLCSRHGYG-QAVAEKCGYSSWSYFISVFHRYYGFP 183

Query: 236 PTEYQER 242
           P  Y  R
Sbjct: 184 PDRYVSR 190



>UniRef100_B3ICY2 Putative transcriptional regulator n=1
           Tax=Escherichia coli E22 RepID=B3ICY2_ECOLX
          Length = 195

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 3/127 (2%)

Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176
           L+ A LS+F  DE  + L L+    ++  +V  +I  +I+  WTL  IA +L MS SLLK
Sbjct: 66  LMMACLSLFETDER-MSLFLSGCLSSISAKVRAIIQTDISASWTLGAIALQLHMSESLLK 124

Query: 177 KKLREEETSYSQLLTECRMQRALQLIVI-HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235
            KL+ E   +S+LL E RM+ A+ ++   HG+  + +A  CGY S SYFI VF  YYG  
Sbjct: 125 TKLKNEGGMFSRLLLEERMRVAVNMLCSRHGYG-QAIAEKCGYSSRSYFISVFHRYYGFP 183

Query: 236 PTEYQER 242
           P  Y  R
Sbjct: 184 PDRYVSR 190



>UniRef100_UPI00000D0509 putative transcriptional regulator n=1
           Tax=Escherichia coli O157:H7 str. EC4024
           RepID=UPI00000D0509
          Length = 237

 Score = 84.7 bits (208), Expect = 8e-15
 Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 1/126 (0%)

Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176
           L+ A LS+F  DE  + L L+    ++  +V  +I  +I+  WTL  IA +L MS SLLK
Sbjct: 108 LMMACLSLFETDER-MSLFLSGCLSSISAKVRAIIQTDISASWTLGAIALQLHMSESLLK 166

Query: 177 KKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
            KL+ E   +S+LL E RM+ A+ ++       + VA  CGY S SYFI VF  YYG  P
Sbjct: 167 TKLKNEGGMFSRLLLEERMRVAVNMLCSRYGYGQAVAEKCGYSSRSYFISVFHRYYGFPP 226

Query: 237 TEYQER 242
             Y  R
Sbjct: 227 DRYVSR 232



>UniRef100_Q8XC44 Putative ARAC-type regulatory protein of CP-933O
           n=1 Tax=Escherichia coli O157:H7 RepID=Q8XC44_ECO57
          Length = 237

 Score = 84.7 bits (208), Expect = 8e-15
 Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 1/126 (0%)

Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176
           L+ A LS+F  DE  + L L+    ++  +V  +I  +I+  WTL  IA +L MS SLLK
Sbjct: 108 LMMACLSLFETDER-MSLFLSGCLSSISAKVRAIIQTDISASWTLGAIALQLHMSESLLK 166

Query: 177 KKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
            KL+ E   +S+LL E RM+ A+ ++       + VA  CGY S SYFI VF  YYG  P
Sbjct: 167 TKLKNEGGMFSRLLLEERMRVAVNMLCSRYGYGQAVAEKCGYSSRSYFISVFHRYYGFPP 226

Query: 237 TEYQER 242
             Y  R
Sbjct: 227 DRYVSR 232



>UniRef100_A7ZH67 HTH-type transcriptional regulator YdeO n=2
           Tax=Escherichia coli RepID=A7ZH67_ECO24
          Length = 240

 Score = 84.7 bits (208), Expect = 8e-15
 Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 2/126 (1%)

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
           K A+ F+LLSVF +  +    L + + P    +V ++  ++++  W L  +A  L MS S
Sbjct: 114 KDAIFFSLLSVFSDVANLRAFLTSGM-PTFSGKVRSIFLSDVSKHWKLRDLADYLYMSES 172

Query: 174 LLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYG 233
           L+KKKL  E TS+S++L + RM  A++L+      IK V+  CG+ S SYF+ +FR YY 
Sbjct: 173 LIKKKLLLENTSFSKILLDTRMSLAIKLLK-QNHPIKYVSEMCGFSSTSYFVCLFRQYYE 231

Query: 234 MTPTEY 239
            TP +Y
Sbjct: 232 CTPRKY 237



>UniRef100_B5Z2Y4 Putative transcriptional regulator n=10
           Tax=Escherichia coli O157:H7 RepID=B5Z2Y4_ECO5E
          Length = 195

 Score = 84.7 bits (208), Expect = 8e-15
 Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 1/126 (0%)

Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176
           L+ A LS+F  DE  + L L+    ++  +V  +I  +I+  WTL  IA +L MS SLLK
Sbjct: 66  LMMACLSLFETDER-MSLFLSGCLSSISAKVRAIIQTDISASWTLGAIALQLHMSESLLK 124

Query: 177 KKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
            KL+ E   +S+LL E RM+ A+ ++       + VA  CGY S SYFI VF  YYG  P
Sbjct: 125 TKLKNEGGMFSRLLLEERMRVAVNMLCSRYGYGQAVAEKCGYSSRSYFISVFHRYYGFPP 184

Query: 237 TEYQER 242
             Y  R
Sbjct: 185 DRYVSR 190



>UniRef100_B7MET2 Putative ARAC-type regulatory protein from phage
           origin n=1 Tax=Escherichia coli S88 RepID=B7MET2_ECO45
          Length = 235

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 53/127 (41%), Positives = 73/127 (57%), Gaps = 5/127 (3%)

Query: 117 LIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLK 176
           L+ A LS+F  DE  + L L+    ++  +V  +I  +I+  WTL  IA +L MS SLLK
Sbjct: 108 LMMACLSLFETDER-MSLFLSGCLSSISAKVRAIIQTDISASWTLGAIALQLHMSESLLK 166

Query: 177 KKLREEETSYSQLLTECRMQRALQLIVI-HGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235
            KL+ E   +S+LL E RM+ A+ ++   HG   + +A  CGY S SYFI VF  YYG  
Sbjct: 167 TKLKNEGGMFSRLLLEERMRVAVNMLCSRHG---QAIAEKCGYSSRSYFISVFHRYYGFP 223

Query: 236 PTEYQER 242
           P  Y  R
Sbjct: 224 PDRYVSR 230



>UniRef100_B8Y8F2 Invasion regulatory protein HilC n=1
           Tax=Salmonella enterica subsp. salamae serovar Sofia
           RepID=B8Y8F2_SALCH
          Length = 295

 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 39/119 (32%), Positives = 71/119 (59%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           L+S F+        L   ++   + +V  +I ++I  +W+ A +A +L MS S LK+KL 
Sbjct: 171 LISAFVRKPGGFDFLERAIKITTKEKVYNIIISDITRKWSQAEVAGKLFMSVSSLKRKLA 230

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            EE S+S++  + RM +A++L+ +   +I +VA  CGY + SYFI +F+ ++ +TP  +
Sbjct: 231 AEEVSFSKIYLDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSF 289



>UniRef100_UPI00019140E7 AraC family transcription regulator n=5
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           RepID=UPI00019140E7
          Length = 253

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/119 (31%), Positives = 71/119 (59%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           L+S F+        L   ++   + +V  +I +++  +W+ A +A +L MS S LK+KL 
Sbjct: 129 LISAFVRKPGGFDFLERAIKITTKEKVYNIIISDLTRKWSQAEVAGKLFMSVSSLKRKLA 188

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            EE S+S++  + RM +A++L+ +   +I +VA  CGY + SYFI +F+ ++ +TP  +
Sbjct: 189 AEEVSFSKIYLDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSF 247



>UniRef100_B4T3E0 Transcriptional regulator, AraC family n=20
           Tax=Salmonella enterica RepID=B4T3E0_SALNS
          Length = 295

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/119 (31%), Positives = 71/119 (59%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           L+S F+        L   ++   + +V  +I +++  +W+ A +A +L MS S LK+KL 
Sbjct: 171 LISAFVRKPGGFDFLERAIKITTKEKVYNIIISDLTRKWSQAEVAGKLFMSVSSLKRKLA 230

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            EE S+S++  + RM +A++L+ +   +I +VA  CGY + SYFI +F+ ++ +TP  +
Sbjct: 231 AEEVSFSKIYLDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSF 289



>UniRef100_Q9R3W3 Transcriptional regulator sirC n=4 Tax=Salmonella
           enterica subsp. enterica RepID=SIRC_SALTY
          Length = 295

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/119 (31%), Positives = 71/119 (59%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           L+S F+        L   ++   + +V  +I +++  +W+ A +A +L MS S LK+KL 
Sbjct: 171 LISAFVRKPGGFDFLERAIKITTKEKVYNIIISDLTRKWSQAEVAGKLFMSVSSLKRKLA 230

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            EE S+S++  + RM +A++L+ +   +I +VA  CGY + SYFI +F+ ++ +TP  +
Sbjct: 231 AEEVSFSKIYLDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSF 289



>UniRef100_Q8Z4A6 Transcriptional regulator sirC n=2 Tax=Salmonella
           enterica subsp. enterica serovar Typhi RepID=SIRC_SALTI
          Length = 295

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/119 (31%), Positives = 71/119 (59%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           L+S F+        L   ++   + +V  +I +++  +W+ A +A +L MS S LK+KL 
Sbjct: 171 LISAFVRKPGGFDFLERAIKITTKEKVYNIIISDLTRKWSQAEVAGKLFMSVSSLKRKLA 230

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            EE S+S++  + RM +A++L+ +   +I +VA  CGY + SYFI +F+ ++ +TP  +
Sbjct: 231 AEEVSFSKIYLDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSF 289



>UniRef100_A9MFA7 Putative uncharacterized protein n=1
           Tax=Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- RepID=A9MFA7_SALAR
          Length = 290

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 38/119 (31%), Positives = 71/119 (59%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           L+S F+        L   ++   + +V  +I ++I  +W+ A +A +L MS S LK+KL 
Sbjct: 166 LISAFVRKPGGFDFLERAIKITTKEKVYNIIISDITRKWSQAEVAGKLFMSVSSLKRKLA 225

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            E+ S+S++  + RM +A++L+ +   +I +VA  CGY + SYFI +F+ ++ +TP  +
Sbjct: 226 AEDVSFSKIYLDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSF 284



>UniRef100_Q93I75 CofS n=1 Tax=Escherichia coli RepID=Q93I75_ECOLX
          Length = 283

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 7/159 (4%)

Query: 90  DIPVFQEVAQLSQNKNLRYAEMLRKRALI-------FALLSVFLEDEHFIPLLLNVLQPN 142
           D P  +EV +L +N        ++    I         LLS F+ +  F  ++   ++ N
Sbjct: 121 DFPAGEEVFELLKNMLSENRMSIKNEGEINIATFSLLLLLSGFIHEPAFPGIIRRSVKLN 180

Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLI 202
           ++ +V  ++      +W L  ++S + MS S LK+KL  E T++S+L    RM  A +L+
Sbjct: 181 VKYKVYNLLYTEPDRQWKLNDVSSAIFMSASTLKRKLASEGTTFSELYITARMNLASKLL 240

Query: 203 VIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241
               +S+  VAV CGY SVSYFI  F+  + +TP  + +
Sbjct: 241 RTGKYSVSNVAVLCGYDSVSYFIACFKRQFSITPFAFMK 279



>UniRef100_Q0TB98 Putative CS12 fimbrial-like upstream regulatory
           protein n=1 Tax=Escherichia coli 536 RepID=Q0TB98_ECOL5
          Length = 276

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/107 (34%), Positives = 64/107 (59%)

Query: 132 IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLT 191
           +PL+          RV  +I +NIA +WTL  ++ E  +S   ++KKL  E   + +L+ 
Sbjct: 163 LPLIYFSAATTFCNRVIELIESNIAKKWTLRLLSEEFSISEIAIRKKLEAEGVIFRELIL 222

Query: 192 ECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
           E RM++A+ L++    S+ ++A   GY+++SYFI  FR ++GMTP +
Sbjct: 223 EIRMKKAMTLLIAGELSVSKIADKVGYNNISYFISHFRQFFGMTPKQ 269



>UniRef100_Q8GA53 Putative CS12 fimbrial-like upstream regulatory
           protein n=1 Tax=Escherichia coli RepID=Q8GA53_ECOLX
          Length = 290

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/107 (34%), Positives = 64/107 (59%)

Query: 132 IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLT 191
           +PL+          RV  +I +NIA +WTL  ++ E  +S   ++KKL  E   + +L+ 
Sbjct: 177 LPLIYFSAATTFCNRVIELIESNIAKKWTLRLLSEEFSISEIAIRKKLEAEGVIFRELIL 236

Query: 192 ECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
           E RM++A+ L++    S+ ++A   GY+++SYFI  FR ++GMTP +
Sbjct: 237 EIRMKKAMTLLIAGELSVSKIADKVGYNNISYFISHFRQFFGMTPKQ 283



>UniRef100_A7XY51 LngS n=1 Tax=Escherichia coli RepID=A7XY51_ECOLX
          Length = 298

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/124 (33%), Positives = 70/124 (56%)

Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177
           +  LLS F+ D  F  ++    + +++ +V  ++      +W L  ++S + MS S LK+
Sbjct: 171 LLLLLSGFIHDTAFAGIISRSAKLSVKYKVYNLLYTEPDKQWKLDDVSSAIFMSASTLKR 230

Query: 178 KLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237
           KL  E T++S+L    RM  A +L+    +S+  VAV CGY SVSYFI  F+  + +TP+
Sbjct: 231 KLATEGTTFSELYITARMNLASKLLRTGKYSVTNVAVLCGYDSVSYFIACFKRQFNITPS 290

Query: 238 EYQE 241
            + +
Sbjct: 291 AFMK 294



>UniRef100_Q9F871 PerA n=1 Tax=Escherichia coli RepID=Q9F871_ECOLX
          Length = 274

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 39/135 (28%), Positives = 76/135 (56%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y++  +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSDNNKKTFKILYLLSFFDDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_Q9F872 PerA n=1 Tax=Escherichia coli RepID=Q9F872_ECOLX
          Length = 274

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/135 (29%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    +M  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDMVNVILSASSKSMVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_Q9F873 PerA n=1 Tax=Escherichia coli RepID=Q9F873_ECOLX
          Length = 274

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/135 (28%), Positives = 76/135 (56%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKTFKILYLLSFFDDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S ++MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMVMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_Q9ALL2 CS12 fimbria upstream putative regulatory protein
           n=1 Tax=Escherichia coli RepID=Q9ALL2_ECOLX
          Length = 258

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 16/204 (7%)

Query: 35  VFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVF 94
           VF D  QI   K + + V+   D L LF   L+ E+   H  KK+ ++ ++   ++   F
Sbjct: 64  VFLDYYQIIALKKILSLVYNFND-LDLF--KLESES---HRIKKIITITINDKIKN--AF 115

Query: 95  QEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNN 154
            E++    N +       +  + +F   +  + D  F PL+L         +V  +I +N
Sbjct: 116 YELSSADNNHD-------KILSFVFFCKTSGISDTIF-PLILLSAATTFCNKVIDLIESN 167

Query: 155 IAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAV 214
           I+ +WTL  ++ +   S   ++KKL  E   +  L+ E RM+RA+ L+V    SI +++ 
Sbjct: 168 ISQKWTLRLLSEKFNASEIAIRKKLESEGVVFRDLILEIRMKRAITLLVEGNLSISQISA 227

Query: 215 SCGYHSVSYFIYVFRNYYGMTPTE 238
             GY ++SYFI  F+ ++G+TP +
Sbjct: 228 GIGYGNISYFISHFKRFFGVTPKQ 251



>UniRef100_Q9F884 PerA n=1 Tax=Escherichia coli RepID=Q9F884_ECOLX
          Length = 274

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 40/135 (29%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    I ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDIINVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_Q47074 BfpT n=2 Tax=Escherichia coli RepID=Q47074_ECOLX
          Length = 274

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKTFKILYLLSFFDDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_A2T8T1 PerA n=1 Tax=Escherichia coli RepID=A2T8T1_ECOLX
          Length = 274

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 41/147 (27%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 93  VFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVIN 152
           V+  +A + Q+ N +      K   I  LLS F      + ++L+    ++  RV  V+ 
Sbjct: 122 VYNMIADIKQSCNSK------KHLKILYLLSFFNNHNDIVNVILSASSTSIVDRVIKVVE 175

Query: 153 NNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRV 212
            +I+  W L  ++S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  +
Sbjct: 176 LDISKNWKLGDVSSSMFMSDSCLRKQLSKENLTFKKIMLDIKMKHASLFLRTTDKNIDEI 235

Query: 213 AVSCGYHSVSYFIYVFRNYYGMTPTEY 239
           +   G++S SYFI VF++YY  TP +Y
Sbjct: 236 SCLVGFNSTSYFIKVFKDYYNTTPKKY 262



>UniRef100_Q9F882 PerA n=1 Tax=Escherichia coli RepID=Q9F882_ECOLX
          Length = 274

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 40/135 (29%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    I ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDIINVILSASSKSIVHRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_Q9F878 PerA n=1 Tax=Escherichia coli RepID=Q9F878_ECOLX
          Length = 274

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_Q9EZ03 PerA n=1 Tax=Escherichia coli RepID=Q9EZ03_ECOLX
          Length = 274

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_Q9APE6 PerA n=1 Tax=Escherichia coli RepID=Q9APE6_ECOLX
          Length = 274

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++++   +K   I  LLS F +    + ++L+    ++  RV  VI  +IA  W L  +
Sbjct: 128 DIKHSGNNKKIFKILYLLSFFNDHNDIVNVILSASSKSIVDRVIKVIELDIAKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_A2T8R3 PerA n=1 Tax=Escherichia coli RepID=A2T8R3_ECOLX
          Length = 274

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++++   +K   I  LLS F +    + ++L+    ++  RV  VI  +IA  W L  +
Sbjct: 128 DIKHSGNNKKIFKILYLLSFFNDHNDIVNVILSASSKSIVDRVIKVIELDIAKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_A2T8Q9 PerA n=1 Tax=Escherichia coli RepID=A2T8Q9_ECOLX
          Length = 274

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDMVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_A2T8Q5 PerA n=1 Tax=Escherichia coli RepID=A2T8Q5_ECOLX
          Length = 274

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_A2T8Q1 PerA n=1 Tax=Escherichia coli RepID=A2T8Q1_ECOLX
          Length = 274

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_A2T8P5 PerA n=1 Tax=Escherichia coli RepID=A2T8P5_ECOLX
          Length = 274

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_A2T8N0 PerA n=1 Tax=Escherichia coli RepID=A2T8N0_ECOLX
          Length = 274

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_P43459 Transcriptional activator perA n=2 Tax=Escherichia
           coli RepID=PERA_ECO27
          Length = 274

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_A2T8N6 PerA n=1 Tax=Escherichia coli RepID=A2T8N6_ECOLX
          Length = 274

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFDDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_B5FSI7 SefR n=1 Tax=Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853 RepID=B5FSI7_SALDC
          Length = 271

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/103 (33%), Positives = 65/103 (63%)

Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIK 210
           I+N+I+ +W L  ++ +L +S   ++KKL  E T++ ++L + RMQ+A +L++     I 
Sbjct: 164 IDNDISTKWRLKTLSEKLNLSEVTIRKKLENENTNFYRILLDARMQKAARLVLDSDTHIN 223

Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSA 253
           +V+ + G  SVSYFI +F +YYG+TP ++  +   R +   +A
Sbjct: 224 KVSYAVGMSSVSYFIKLFSDYYGLTPKQFHLKYKHRNTGEKAA 266



>UniRef100_B5BKV0 Fimbrial regulator n=2 Tax=Salmonella enterica
           subsp. enterica serovar Paratyphi A RepID=B5BKV0_SALPK
          Length = 214

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/103 (33%), Positives = 65/103 (63%)

Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIK 210
           I+N+I+ +W L  ++ +L +S   ++KKL  E T++ ++L + RMQ+A +L++     I 
Sbjct: 107 IDNDISTKWRLKTLSEKLNLSEVTIRKKLENENTNFYRILLDARMQKAARLVLDSDTHIN 166

Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSA 253
           +V+ + G  SVSYFI +F +YYG+TP ++  +   R +   +A
Sbjct: 167 KVSYAVGMSSVSYFIKLFSDYYGLTPKQFHLKYKHRNTGEKAA 209



>UniRef100_B5R1L9 Fimbrial operon positive regulatory protein n=2
           Tax=Salmonella enterica subsp. enterica serovar
           Enteritidis RepID=B5R1L9_SALEP
          Length = 271

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/103 (33%), Positives = 65/103 (63%)

Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIK 210
           I+N+I+ +W L  ++ +L +S   ++KKL  E T++ ++L + RMQ+A +L++     I 
Sbjct: 164 IDNDISTKWRLKTLSEKLNLSEVTIRKKLENENTNFYRILLDARMQKAARLVLDSDTHIN 223

Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSA 253
           +V+ + G  SVSYFI +F +YYG+TP ++  +   R +   +A
Sbjct: 224 KVSYAVGMSSVSYFIKLFSDYYGLTPKQFHLKYKHRNTGEKAA 266



>UniRef100_Q9F877 PerA n=1 Tax=Escherichia coli RepID=Q9F877_ECOLX
          Length = 274

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++Y+   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKYSGNNKKIFKILYLLSFFNDYNDIVNVILSASSKSIVHRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLSKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_Q02458 Urease operon transcriptional activator n=1
           Tax=Proteus mirabilis HI4320 RepID=URER_PROMH
          Length = 293

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 2/151 (1%)

Query: 111 MLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170
           +  +++L F LL+V+ E    + +            +  +I  +   +W L  +A  L  
Sbjct: 137 LFMQQSLFFILLAVYHEGVDILNIFRFNYDEPKNQAITHLITQDPQRKWHLEDVAKTLYT 196

Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230
           +PS L++ L +E  S+ QLL + RM  AL  +    +S+ +++  CG+ S +YF   F+ 
Sbjct: 197 TPSTLRRHLSKEGVSFCQLLLDVRMPIALNYLTFSNYSVFQISHRCGFGSNAYFCDAFKR 256

Query: 231 YYGMTPTEYQERSAQRLSNRDSAASIVAQGN 261
            YGMTP++++ +S Q  +N  +A + +A  N
Sbjct: 257 KYGMTPSQFRTQSRQ--ANDPNAIATMASQN 285



>UniRef100_UPI000190EB5C transcriptional regulator HilD n=1
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           str. E01-6750 RepID=UPI000190EB5C
          Length = 88

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 34/82 (41%), Positives = 50/82 (60%)

Query: 158 EWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCG 217
           +W L  +A  + MS S LK+KL EE TS+S +    RM +A +L+ I   ++  VA+ CG
Sbjct: 1   QWKLTDVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCG 60

Query: 218 YHSVSYFIYVFRNYYGMTPTEY 239
           Y S SYFI  F+ Y+  TP+ +
Sbjct: 61  YDSTSYFIQCFKKYFKTTPSTF 82



>UniRef100_C2LNP6 Urease operon transcriptional activator n=1
           Tax=Proteus mirabilis ATCC 29906 RepID=C2LNP6_PROMI
          Length = 293

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 2/151 (1%)

Query: 111 MLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLM 170
           +  +++L F LL+V+ E    + +            +  +I  +   +W L  +A  L  
Sbjct: 137 LFMQQSLFFILLAVYHEGVDILNIFRFNYDEPKNQAITHLITQDPQRKWHLEDVAKTLYT 196

Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230
           +PS L++ L +E  S+ QLL + RM  AL  +    +S+ +++  CG+ S +YF   F+ 
Sbjct: 197 TPSTLRRHLSKEGVSFCQLLLDVRMGIALNYLTFSNYSVFQISHRCGFGSNAYFCDAFKR 256

Query: 231 YYGMTPTEYQERSAQRLSNRDSAASIVAQGN 261
            YGMTP++++ +S Q  +N  +A + +A  N
Sbjct: 257 KYGMTPSQFRTQSRQ--ANDPNAIATMASQN 285



>UniRef100_A2T8S3 PerA n=1 Tax=Escherichia coli RepID=A2T8S3_ECOLX
          Length = 274

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 39/127 (30%), Positives = 69/127 (54%)

Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172
           +K   I  LLS F      I ++L+    ++  RV  VI  +I+  W L  ++S + MS 
Sbjct: 136 KKTFKILYLLSFFNNHNDIINVILSASSKSIVDRVIKVIELDISKNWKLGDVSSSMFMSD 195

Query: 173 SLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232
           S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYFI VF+ YY
Sbjct: 196 SCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYFIKVFKEYY 255

Query: 233 GMTPTEY 239
             TP +Y
Sbjct: 256 NTTPKKY 262



>UniRef100_A2T8P9 PerA n=1 Tax=Escherichia coli RepID=A2T8P9_ECOLX
          Length = 274

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 38/135 (28%), Positives = 75/135 (55%)

Query: 105 NLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARI 164
           +++++   +K   I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  +
Sbjct: 128 DIKHSGNNKKTFKILYLLSFFNDYNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDV 187

Query: 165 ASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
           +S + MS S L+K+L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYF
Sbjct: 188 SSSMFMSDSCLRKQLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYF 247

Query: 225 IYVFRNYYGMTPTEY 239
           I VF+ YY  TP +Y
Sbjct: 248 IKVFKEYYNTTPKKY 262



>UniRef100_P32326 Urease operon transcriptional activator n=1
           Tax=Escherichia coli RepID=URER_ECOLX
          Length = 296

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 2/186 (1%)

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRD-IPVFQEVAQLSQNKNLRYAEMLRKRALIF 119
           L L  L +    L +H+ +  +      RD   + ++   L +    + A +L K++L F
Sbjct: 87  LLLKTLMKSGAPLTSHQPIYHISPPETVRDNFSLLKQCLPLKKQSASQEA-LLMKQSLYF 145

Query: 120 ALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179
            L++++ E    + L            +  +I      +W L  +A  L  +PS L++ L
Sbjct: 146 ILMAIYQEGIDILNLFRFNYDEPKNQAITHLITQEPQKKWHLDDVAKALFTTPSTLRRHL 205

Query: 180 REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
             E  S+ QLL + RM  AL  +    +S+ +++  CG+ S +YF  VF+  Y MTP+++
Sbjct: 206 NREGVSFRQLLLDVRMGMALNYLTFSNYSVFQISHRCGFGSNAYFCDVFKRKYNMTPSQF 265

Query: 240 QERSAQ 245
           + +S Q
Sbjct: 266 RLQSRQ 271



>UniRef100_UPI000190F266 fimbrial operon positive regulatory protein
           n=2 Tax=Salmonella enterica subsp. enterica serovar
           Typhi RepID=UPI000190F266
          Length = 219

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/96 (35%), Positives = 62/96 (64%)

Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIK 210
           I+N+I+ +W L  ++ +L +S   ++KKL  E T++ ++L + RMQ+A +L++     I 
Sbjct: 112 IDNDISTKWRLKTLSEKLNLSEVTIRKKLENENTNFYRILLDARMQKAARLVLDSDTHIN 171

Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246
           +V+ + G  SVSYFI +F +YYG+TP ++  +   R
Sbjct: 172 KVSYAVGMSSVSYFIKLFSDYYGLTPKQFHLKYKHR 207



>UniRef100_A2T8S1 PerA n=1 Tax=Escherichia coli RepID=A2T8S1_ECOLX
          Length = 274

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/122 (30%), Positives = 68/122 (55%)

Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177
           I  LLS F +    + ++L+    ++  RV  VI  +I+  W L  ++S + MS S L+K
Sbjct: 141 ILYLLSFFNDHNDIVNVILSASSKSIVDRVIKVIELDISKNWKLGDVSSSMFMSDSCLRK 200

Query: 178 KLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237
           +L +E  ++ +++ + +M+ A   +     +I  ++   G++S SYFI VF+ YY  TP 
Sbjct: 201 QLNKENLTFKKIMLDIKMKHASLFLRTTDKNIDEISCLVGFNSTSYFIKVFKEYYNTTPK 260

Query: 238 EY 239
           +Y
Sbjct: 261 KY 262



>UniRef100_Q65QI0 AraC protein n=1 Tax=Mannheimia succiniciproducens
           MBEL55E RepID=Q65QI0_MANSM
          Length = 284

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 50/158 (31%), Positives = 87/158 (55%), Gaps = 10/158 (6%)

Query: 94  FQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEH--FIPLLLNVLQPNMRTRVCTVI 151
           F  V Q  +N     A  L  +  +F LL+ +L+ EH  F+P   +    N+  ++  +I
Sbjct: 123 FDVVRQALENDE---APELVLKLKLFELLA-WLKAEHLSFVPHEKH----NLLRQIRKMI 174

Query: 152 NNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKR 211
            +N A EWT   IA +L +S + L++ L++ +T++ ++LT+ RM RAL L+ I  + + R
Sbjct: 175 ASNTAFEWTAETIARQLHLSETSLRRALQKSDTTFREVLTDVRMSRALTLLQITKWQVAR 234

Query: 212 VAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSN 249
           +A   GY S S F   F+  +G  P++ +E  +Q + N
Sbjct: 235 IANEVGYDSPSRFTVRFKQRFGFLPSDIRENLSQPVQN 272



>UniRef100_B5R9N2 Fimbrial operon positive regulatory protein n=1
           Tax=Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91 RepID=B5R9N2_SALG2
          Length = 271

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/103 (33%), Positives = 65/103 (63%)

Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIK 210
           I+N+I+ +W L  ++ +L +S   ++KKL  E T++ ++L + RMQ+A +L++     I 
Sbjct: 164 IDNDISTKWRLKTLSEKLNLSEVTIRKKLENENTNFYRILLDARMQKAARLVLDSDTHIN 223

Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSA 253
           +V+ +    SVSYFI +F +YYG+TP ++ ++   R +   +A
Sbjct: 224 KVSYAVRMSSVSYFIKLFSDYYGLTPKQFHQKYKHRNTGEKAA 266



>UniRef100_Q9L6K7 Putative activator protein SefR n=1 Tax=Salmonella
           enterica subsp. enterica serovar Enteritidis
           RepID=Q9L6K7_SALEN
          Length = 271

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/103 (33%), Positives = 64/103 (62%)

Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIK 210
           I+N+I+ +W L  ++ +L +S   ++KKL  E T++ ++  + RMQ+A +L++     I 
Sbjct: 164 IDNDISTKWRLKTLSEKLNLSEVTIRKKLENENTNFYRIFLDARMQKAARLVLDSDTHIN 223

Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSA 253
           +V+ + G  SVSYFI +F +YYG+TP ++  +   R +   +A
Sbjct: 224 KVSYAVGMSSVSYFIKLFSDYYGLTPKQFHLKYKHRNTGEKAA 266



>UniRef100_A4XTP8 Transcriptional regulator, AraC family n=1
           Tax=Pseudomonas mendocina ymp RepID=A4XTP8_PSEMY
          Length = 268

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/102 (33%), Positives = 58/102 (56%)

Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRAL 199
           +PN   R+  ++N +I H+WT+ R+A  L +S S L ++L+ E T    +++  R+ + L
Sbjct: 161 RPNFSQRLHAIVNEDICHDWTMGRLAERLAISESTLHRRLKAEGTGIKSIVSRARLSQGL 220

Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241
            L+      I R+A  CGY S S F   F+  +G+TP E ++
Sbjct: 221 FLVQTTMDPIGRIAERCGYQSQSRFTDRFKQQFGITPRELRK 262



>UniRef100_C2LMQ1 Virulence regulon transcriptional activator VirF
           n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LMQ1_PROMI
          Length = 263

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 1/106 (0%)

Query: 132 IPLLLNVLQPNMRT-RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLL 190
           IP L+   +P + + +V  +I +++ H W+L  I+S+L +S S L+KKL  E+T++  LL
Sbjct: 145 IPNLILKSKPELTSVKVKDIIISDLQHSWSLKEISSKLFISESSLRKKLEAEKTNFMTLL 204

Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           T  RM  A+ L+     +I +++   GY + SYFI  F+ YY  +P
Sbjct: 205 TTVRMAHAMNLLATTNLTIGQISSLSGYKNTSYFIKKFKKYYKSSP 250



>UniRef100_P23774 987P fimbrial operon positive regulatory protein
           fapR n=1 Tax=Escherichia coli RepID=FAPR_ECOLX
          Length = 260

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/95 (34%), Positives = 61/95 (64%)

Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205
           R+ T++ +++  +W L+ IA E+ +S   ++K+L +E  +++QL+ + RM +A + I+  
Sbjct: 155 RIVTLLFSDLTRKWKLSDIAEEMHISEISVRKRLEQECLNFNQLILDVRMNQAAKFIIRS 214

Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
              I  +A   GY SVSYFI  F+ YYG+TP +++
Sbjct: 215 DHQIGMIASLVGYTSVSYFIKTFKEYYGVTPKKFE 249



>UniRef100_UPI0001902239 transcriptional regulator n=1
           Tax=Mycobacterium tuberculosis T17 RepID=UPI0001902239
          Length = 316

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 29/252 (11%)

Query: 9   LIAYARHKYILTMVNGEYRYFNGGD--LVFADASQIRVDKCVENFVFVSRD-------TL 59
           L+  A   + LT ++ +   F   D  LV  DAS +  D  V  F F+ RD       T 
Sbjct: 75  LLTIAMRYFALTTMHVDITLFETADDCLVELDASHLPAD--VRGF-FIERDIAGIIATTT 131

Query: 60  SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF 119
           S  LP+  + A  + A   V + L+      +PV  +VA    +  + +   +    L  
Sbjct: 132 SFALPLAAKYADQVSAELAVDAELLRPLLELVPV-HDVAFGRAHNRVHFPRAMFDEPLPQ 190

Query: 120 ALLSVFLEDEHFIPLLLN----VLQPNMRTR-VCTVINNNIAHEW----TLARIASELLM 170
           A       D H + + +     ++Q N R R +  ++ + +  +     T   +A EL M
Sbjct: 191 A-------DRHTLEMCIAQCDVLMQRNERRRGITALVRSKLFRDSGLFPTFTDVAGELDM 243

Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230
            P  L+++L EE TS+  LL E R   A+ L+   G ++++V+   GY  VS F + F+ 
Sbjct: 244 HPRTLRRRLAEEGTSFRALLGEARSTVAVDLLRNVGLTVQQVSTRLGYTEVSTFSHAFKR 303

Query: 231 YYGMTPTEYQER 242
           +YG+ P+EY  R
Sbjct: 304 WYGVAPSEYSRR 315



>UniRef100_UPI00019012B6 transcriptional regulator n=1
           Tax=Mycobacterium tuberculosis T92 RepID=UPI00019012B6
          Length = 335

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 29/252 (11%)

Query: 9   LIAYARHKYILTMVNGEYRYFNGGD--LVFADASQIRVDKCVENFVFVSRD-------TL 59
           L+  A   + LT ++ +   F   D  LV  DAS +  D  V  F F+ RD       T 
Sbjct: 94  LLTIAMRYFALTTMHVDITLFETADDCLVELDASHLPAD--VRGF-FIERDIAGIIATTT 150

Query: 60  SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF 119
           S  LP+  + A  + A   V + L+      +PV  +VA    +  + +   +    L  
Sbjct: 151 SFALPLAAKYADQVSAELAVDAELLRPLLELVPV-HDVAFGRAHNRVHFPRAMFDEPLPQ 209

Query: 120 ALLSVFLEDEHFIPLLLN----VLQPNMRTR-VCTVINNNIAHEW----TLARIASELLM 170
           A       D H + + +     ++Q N R R +  ++ + +  +     T   +A EL M
Sbjct: 210 A-------DRHTLEMCIAQCDVLMQRNERRRGITALVRSKLFRDSGLFPTFTDVAGELDM 262

Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230
            P  L+++L EE TS+  LL E R   A+ L+   G ++++V+   GY  VS F + F+ 
Sbjct: 263 HPRTLRRRLAEEGTSFRALLGEARSTVAVDLLRNVGLTVQQVSTRLGYTEVSTFSHAFKR 322

Query: 231 YYGMTPTEYQER 242
           +YG+ P+EY  R
Sbjct: 323 WYGVAPSEYSRR 334



>UniRef100_UPI00005EE536 transcriptional regulator n=1
           Tax=Mycobacterium tuberculosis 94_M4241A
           RepID=UPI00005EE536
          Length = 331

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 29/252 (11%)

Query: 9   LIAYARHKYILTMVNGEYRYFNGGD--LVFADASQIRVDKCVENFVFVSRD-------TL 59
           L+  A   + LT ++ +   F   D  LV  DAS +  D  V  F F+ RD       T 
Sbjct: 90  LLTIAMRYFALTTMHVDITLFETADDCLVELDASHLPAD--VRGF-FIERDIAGIIATTT 146

Query: 60  SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF 119
           S  LP+  + A  + A   V + L+      +PV  +VA    +  + +   +    L  
Sbjct: 147 SFALPLAAKYADQVSAELAVDAELLRPLLELVPV-HDVAFGRAHNRVHFPRAMFDEPLPQ 205

Query: 120 ALLSVFLEDEHFIPLLLN----VLQPNMRTR-VCTVINNNIAHEW----TLARIASELLM 170
           A       D H + + +     ++Q N R R +  ++ + +  +     T   +A EL M
Sbjct: 206 A-------DRHTLEMCIAQCDVLMQRNERRRGITALVRSKLFRDSGLFPTFTDVAGELDM 258

Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230
            P  L+++L EE TS+  LL E R   A+ L+   G ++++V+   GY  VS F + F+ 
Sbjct: 259 HPRTLRRRLAEEGTSFRALLGEARSTVAVDLLRNVGLTVQQVSTRLGYTEVSTFSHAFKR 318

Query: 231 YYGMTPTEYQER 242
           +YG+ P+EY  R
Sbjct: 319 WYGVAPSEYSRR 330



>UniRef100_Q8GA34 AraC-like transcriptional regulator n=2
           Tax=Escherichia coli RepID=Q8GA34_ECOLX
          Length = 271

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/88 (37%), Positives = 57/88 (64%)

Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIK 210
           I NN +  W L  IA E  +S   ++K+L  E TS+S L  + RM++++QL++ +   I 
Sbjct: 177 IENNPSKRWCLNMIADEFNISEISVRKRLESEGTSFSNLFLKVRMEKSMQLLLQNELQIC 236

Query: 211 RVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
           +++ S G+ S SYFI +F++Y+G+TP +
Sbjct: 237 QISKSVGFRSTSYFIKIFKDYFGITPKQ 264



>UniRef100_P68913 Uncharacterized HTH-type transcriptional regulator
           Rv1395/MT1440 n=8 Tax=Mycobacterium tuberculosis complex
           RepID=Y1395_MYCTU
          Length = 344

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 29/252 (11%)

Query: 9   LIAYARHKYILTMVNGEYRYFNGGD--LVFADASQIRVDKCVENFVFVSRD-------TL 59
           L+  A   + LT ++ +   F   D  LV  DAS +  D  V  F F+ RD       T 
Sbjct: 103 LLTIAMRYFALTTMHVDITLFETADDCLVELDASHLPAD--VRGF-FIERDIAGIIATTT 159

Query: 60  SLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF 119
           S  LP+  + A  + A   V + L+      +PV  +VA    +  + +   +    L  
Sbjct: 160 SFALPLAAKYADQVSAELAVDAELLRPLLELVPV-HDVAFGRAHNRVHFPRAMFDEPLPQ 218

Query: 120 ALLSVFLEDEHFIPLLLN----VLQPNMRTR-VCTVINNNIAHEW----TLARIASELLM 170
           A       D H + + +     ++Q N R R +  ++ + +  +     T   +A EL M
Sbjct: 219 A-------DRHTLEMCIAQCDVLMQRNERRRGITALVRSKLFRDSGLFPTFTDVAGELDM 271

Query: 171 SPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230
            P  L+++L EE TS+  LL E R   A+ L+   G ++++V+   GY  VS F + F+ 
Sbjct: 272 HPRTLRRRLAEEGTSFRALLGEARSTVAVDLLRNVGLTVQQVSTRLGYTEVSTFSHAFKR 331

Query: 231 YYGMTPTEYQER 242
           +YG+ P+EY  R
Sbjct: 332 WYGVAPSEYSRR 343



>UniRef100_Q9ALK0 Probable CS12 fimbria transcriptional activator
           protein n=1 Tax=Escherichia coli RepID=Q9ALK0_ECOLX
          Length = 265

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/94 (35%), Positives = 60/94 (63%)

Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205
           +V  VI  N++ +WTLA IA    +S   ++K+L  E  +++Q+L + RM +A  L++ +
Sbjct: 165 KVRDVIEKNLSRKWTLAIIADIFNVSEITIRKRLESECANFNQILMQSRMSKAALLLLEN 224

Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            + + +++   G  SVSYFI VF N++G+TP ++
Sbjct: 225 SYQVSQISNMIGISSVSYFIRVFNNHFGVTPKQF 258



>UniRef100_P25393 CFA/I fimbrial subunit D n=1 Tax=Escherichia coli
           RepID=CFAD_ECOLX
          Length = 265

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 32/94 (34%), Positives = 58/94 (61%)

Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205
           +V  VI  +++ +WTL  IA    +S   ++K+L  E T+++Q+L + RM +A  L++ +
Sbjct: 165 KVRNVIEKDLSRKWTLGIIADAFNVSEITIRKRLESENTNFNQILMQLRMSKAALLLLEN 224

Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            + I +++   G  S SYFI VF  +YG+TP ++
Sbjct: 225 SYQISQISNMIGISSASYFIRVFNKHYGVTPKQF 258



>UniRef100_A7ZGX7 Transcriptional regulator, AraC family n=1
           Tax=Escherichia coli E24377A RepID=A7ZGX7_ECO24
          Length = 209

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/124 (29%), Positives = 72/124 (58%), Gaps = 1/124 (0%)

Query: 116 ALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175
           ALI+ +  +   D+    L ++ +      +V  VI  +++ +WTLA IA    +S   +
Sbjct: 80  ALIYLISKIKCNDKIIESLYMSSIT-FFTDKVRGVIEKDLSRKWTLAIIADVFNVSEITI 138

Query: 176 KKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235
           +K+L  E+T+++Q+L + RM +A  L++ + + I +++   G  S SYFI +F  ++G+T
Sbjct: 139 RKRLESEDTNFNQILMQSRMSKAALLLLENSYQISQISNMIGISSASYFIRIFNKHFGVT 198

Query: 236 PTEY 239
           P ++
Sbjct: 199 PKQF 202



>UniRef100_A6WTM9 Helix-turn-helix-domain containing protein AraC
           type n=1 Tax=Shewanella baltica OS185 RepID=A6WTM9_SHEB8
          Length = 252

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 2/141 (1%)

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
           L Q+ +L  A+ ++   L   LLS  L D+  +  L    Q ++      +++ + A  W
Sbjct: 111 LLQSLSLSLADSVQLHYLAALLLS--LPDKRSVSWLYGHTQRSVTQAALALMSVSPAAPW 168

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
               IA +L MS + L++KL  E+TS+ QLL E R+   L ++   G  + +VA++CGY 
Sbjct: 169 QQEEIADKLHMSTASLRRKLALEDTSFRQLLVEVRLSHGLAMLQNSGEPLLQVALACGYQ 228

Query: 220 SVSYFIYVFRNYYGMTPTEYQ 240
           S   F   F+  +G+TP  Y+
Sbjct: 229 SAEKFSLRFKQQFGLTPAAYR 249



>UniRef100_P16114 Regulatory protein rns n=2 Tax=Escherichia coli
           RepID=RNS_ECOLX
          Length = 265

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/175 (24%), Positives = 85/175 (48%), Gaps = 1/175 (0%)

Query: 66  LKEEALNLHAHKKVSSLLVHHCSRDIPVFQ-EVAQLSQNKNLRYAEMLRKRALIFALLSV 124
           LK+  + ++   K+ +      SR I   +     L + KN+   +     + +  L+S 
Sbjct: 84  LKDALMIIYGMSKIDTNACRSMSRKIMTTEVNKTLLDELKNINSHDNSAFISSLIYLISK 143

Query: 125 FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEET 184
              +E  I  +          +V  +I  +++ +WTL  IA     S   ++K+L  E T
Sbjct: 144 LENNEKIIESIYISSVSFFSDKVRNLIEKDLSRKWTLGIIADAFNASEITIRKRLESENT 203

Query: 185 SYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
           +++Q+L + RM +A  L++ + + I +++   G  S SYFI +F  +YG+TP ++
Sbjct: 204 NFNQILMQLRMSKAALLLLENSYQISQISNMIGISSASYFIRIFNKHYGVTPKQF 258



>UniRef100_Q87NV3 Putative uncharacterized protein VP1765 n=1
           Tax=Vibrio parahaemolyticus RepID=Q87NV3_VIBPA
          Length = 275

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/105 (31%), Positives = 61/105 (58%)

Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201
           ++ +R+  +I+ ++   WTL  IA  + MS S +K+KL +E T+++ +L   R+  A ++
Sbjct: 169 SLSSRIRALISKDLTKPWTLKEIAKLVYMSESTVKRKLNKEGTTFTDVLQAARLDTAQKM 228

Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246
           +     S+  +A  CG+   SYF   FR  YG+TP  Y++++  R
Sbjct: 229 VCNSDASVSAIAELCGFKHASYFGACFRKEYGVTPLAYRKQAQLR 273



>UniRef100_B6XD52 Putative uncharacterized protein n=1
           Tax=Providencia alcalifaciens DSM 30120
           RepID=B6XD52_9ENTR
          Length = 282

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 28/236 (11%)

Query: 19  LTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKK 78
           L + NGE+   +  ++ F    ++     +E       + ++L +  +  E LN + +K+
Sbjct: 42  LRIENGEWCNLSTNNICFLPKGKV-----IEFIKKAVSEKIALDIMPVSAEMLN-YFYKQ 95

Query: 79  VSSLLVHH---------CSRDIP-----------VFQEVAQLSQNKNLRYAEMLRKRAL- 117
            S+L +           C+ DI              QE+  L  N + +   +  K A+ 
Sbjct: 96  NSALFIEKKKTHYHSQVCTTDISNTPILGEVFYSAIQEIRHLEMNTDTKIKNVDNKMAIH 155

Query: 118 IFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHE-WTLARIASELLMSPSLLK 176
           +  +LS FL +  F P L   +    + +V   I +N   +  TL  IA +L MS S LK
Sbjct: 156 LNFVLSFFLLENTFYPTLQTSMNVLTKDKVYDYIYHNSGKQNCTLELIAKQLHMSTSTLK 215

Query: 177 KKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232
           ++L  E+T++S +    RM +A+ L  +    + R+A   GY  + +FI  F+N+Y
Sbjct: 216 RRLASEDTNFSTISLTSRMNKAMMLSKVDNMPMPRIAQEVGYDDIPHFIQAFKNFY 271



>UniRef100_UPI0001A4439F AraC family transcriptional regulator n=1
           Tax=Pectobacterium carotovorum subsp. carotovorum WPP14
           RepID=UPI0001A4439F
          Length = 288

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 34/99 (34%), Positives = 57/99 (57%)

Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRAL 199
           QP +  ++ T+I+      WT       L MS + L+++L  E+T +  LL E RMQ A+
Sbjct: 188 QPGVTAQLRTLISEEPERHWTAQSAGRRLAMSEATLRRRLSAEQTRFEVLLLETRMQHAM 247

Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
            L+    +S++R+A +CGY S + F   F+N +G +PT+
Sbjct: 248 MLVQTTSWSMQRLAEACGYKSSARFSERFKNRFGCSPTK 286



>UniRef100_UPI000190C2F3 AraC family transcription regulator n=1
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           str. 404ty RepID=UPI000190C2F3
          Length = 141

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 1/116 (0%)

Query: 103 NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA 162
           NK+    E L    L+F LL+ FL       ++L+  Q  ++ RV  +I+++ + +W L 
Sbjct: 26  NKSCIENEELIPYFLLF-LLTAFLRLPESYEIILSSAQITLKKRVYNIISSSPSRQWKLT 84

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218
            +A  + MS S LK+KL EE TS+S +    RM +A +L+ I   ++  VA+ CGY
Sbjct: 85  DVADHIFMSTSTLKRKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGY 140



>UniRef100_Q8EJY9 Transcriptional regulator, AraC/XylS family n=1
           Tax=Shewanella oneidensis RepID=Q8EJY9_SHEON
          Length = 252

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 10/229 (4%)

Query: 18  ILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRD------TLSLFLPMLKEEAL 71
           I+ ++ GE       D +  +A Q+ +     +  FV+R        + L LP      +
Sbjct: 25  IIRVIQGEKSLLWQDDALSVNADQLLLLPAGTHISFVNRPMGGRYRAVQLLLPYELPSGV 84

Query: 72  NLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHF 131
            L    +  S      SR +        L  +  L     ++   L   LLS  L  +  
Sbjct: 85  ILAPTDRTMSKPTQAISRSVDFAWNA--LLHSLTLALPTSVQMHYLAALLLS--LPQQSS 140

Query: 132 IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLT 191
           +  L    Q ++   V  +++ + + +W   ++A +L MS + L++KL +E+TS+ QLL 
Sbjct: 141 VNWLYGHKQSSVTQAVLAILSQHPSAQWQQEQLAEKLHMSSASLRRKLVQEDTSFRQLLA 200

Query: 192 ECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           E R+ + L L+     S+ +VA+SCGY S   F   F+  +G+TP  Y+
Sbjct: 201 EVRLCQGLALLQNSSDSVLQVALSCGYLSAEKFSARFKQAFGLTPAAYR 249



>UniRef100_A6AXU3 Transcriptional regulator, AraC family protein n=1
           Tax=Vibrio parahaemolyticus AQ3810 RepID=A6AXU3_VIBPA
          Length = 238

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 33/105 (31%), Positives = 60/105 (57%)

Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201
           ++ +R+  +I+ ++   WTL  IA  + MS S +K+KL +E T+++ +L   R+  A ++
Sbjct: 132 SLSSRIRALISKDLTKPWTLKEIAKLVYMSESTVKRKLNKEGTTFTDVLQAARLDTAQKM 191

Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246
           +     S+  +A  CG+   SYF   FR  YG TP  Y++++  R
Sbjct: 192 VCNSDASVSAIAELCGFKHASYFGACFRKEYGATPLAYRKQAQLR 236



>UniRef100_Q5DYJ4 Transcriptional regulator, AraC family n=1
           Tax=Vibrio fischeri ES114 RepID=Q5DYJ4_VIBF1
          Length = 269

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/102 (31%), Positives = 61/102 (59%)

Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201
           ++++ +  ++  +  H WTL  ++ EL  +PS L++ L++E  S+S+LL + R+   L  
Sbjct: 160 SVKSLISELVKKSPEHSWTLITVSKELNTTPSTLRRHLKKENISFSKLLLKIRLGLGLNY 219

Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243
           +     SI +V+   G++S +YF  VF+  Y MTP+E++  S
Sbjct: 220 LTFSNHSILKVSYLSGFNSSAYFCDVFKKEYHMTPSEFRINS 261



>UniRef100_B1KQG3 Transcriptional regulator, AraC family n=1
           Tax=Shewanella woodyi ATCC 51908 RepID=B1KQG3_SHEWM
          Length = 259

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 2/143 (1%)

Query: 99  QLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHE 158
           QL   + L + E  ++  L  A   + LE    + LL      +MR RVC  ++N  A  
Sbjct: 117 QLLAMQELDFTEQTQQHYLD-AFYQILLE-AGLLQLLFPGADLSMRERVCRFLSNEPAKA 174

Query: 159 WTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218
            ++  + + L  S S L ++L +E TSY +LL+E RM  AL L+    +    +A++CGY
Sbjct: 175 HSIDELCTHLGQSRSTLTRRLADESTSYRELLSETRMLHALSLMQTRPYKQLELALACGY 234

Query: 219 HSVSYFIYVFRNYYGMTPTEYQE 241
            S + F   F   +G+TP +Y +
Sbjct: 235 QSETRFGQRFLKQFGLTPKQYMK 257



>UniRef100_A9L662 Transcriptional regulator, AraC family n=2
           Tax=Shewanella baltica RepID=A9L662_SHEB9
          Length = 252

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 2/141 (1%)

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
           L Q+ +L  A+ ++   L   LLS  L D+  +  L    Q ++      +++ + +  W
Sbjct: 111 LLQSLSLSLADSVQLHYLAALLLS--LPDKRSVNWLYGHTQRSVTQAALALMSVSPSAPW 168

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
               IA +L MS + L++KL  E+TS+ QLL E R+   L ++   G  + +VA++CGY 
Sbjct: 169 QQEEIADKLHMSTASLRRKLALEDTSFRQLLVEVRLSHGLAMLQNSGEPLLQVALACGYQ 228

Query: 220 SVSYFIYVFRNYYGMTPTEYQ 240
           S   F   F+  +G+TP  Y+
Sbjct: 229 SAEKFSLRFKQQFGLTPAAYR 249



>UniRef100_Q08JQ9 HdaR, HUS-associated diffuse adherence homologous
           to AggR of enteroaggregative Escherichia coli n=1
           Tax=Escherichia coli RepID=Q08JQ9_ECOLX
          Length = 265

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 1/178 (0%)

Query: 63  LPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQ-EVAQLSQNKNLRYAEMLRKRALIFAL 121
           L  LK+  + ++   KV +    + S+ I V   + + L   K++ + +  R  + +  L
Sbjct: 81  LRRLKDALMIIYGISKVDACSCPNWSKGIIVADADDSVLDTFKSIEHNDDSRIASDLIYL 140

Query: 122 LSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLRE 181
           +S    +   I  +          +V   I  +++  WTLA IA E  +S   ++K+L  
Sbjct: 141 ISKIENNRKIIESIYISAVSFFSDKVRNTIEKDLSKRWTLAIIADEFNVSEITIRKRLES 200

Query: 182 EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
           E  +++Q+L + RM +A  L++ + + I +++   G+ S SYFI +F  ++G+TP ++
Sbjct: 201 ERITFNQILMQSRMSKAALLLLDNSYQISQISNMIGFSSTSYFIRLFVKHFGVTPKQF 258



>UniRef100_B3IA36 Virulence regulon transcriptional activator VirF
           n=1 Tax=Escherichia coli E22 RepID=B3IA36_ECOLX
          Length = 276

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 49/188 (26%), Positives = 94/188 (50%), Gaps = 9/188 (4%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLL--VHHCSRDIPVFQEVAQLSQNKNLRYAEM 111
           +  + LS    +++   LN H   KV S+   + +C+ D     E+ ++    N+ +  +
Sbjct: 88  IDNNILSCICKVMEPLLLNPH---KVGSMRSRIFNCTAD-KTDTEIFKIITEANVPHHRL 143

Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171
           +     I  LLS   + E  +  L          ++ ++I ++++  W L  +A+ L MS
Sbjct: 144 IYN---ITYLLSKVDDIESLVCSLSVSTDSTFTEKLKSIIESDLSKSWRLVDLANVLHMS 200

Query: 172 PSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231
              ++KKL +E  +++ L+ + RMQ A +LI      I  ++   GY S SYFI  F++Y
Sbjct: 201 EVSIRKKLEKENNNFNNLILDIRMQHAARLITTTEKHINSISDEVGYVSTSYFIRNFKSY 260

Query: 232 YGMTPTEY 239
           +G+TP ++
Sbjct: 261 FGITPKQF 268



>UniRef100_A2PNS5 Transcriptional regulator, AraC family protein n=1
           Tax=Vibrio cholerae MZO-3 RepID=A2PNS5_VIBCH
          Length = 267

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 159 WTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH-GFSIKRVAVSCG 217
           W+L+ +A EL MS S LK+KL+ E+ ++++L    RM  A +L++ +    I  VA  CG
Sbjct: 181 WSLSMMAKELYMSESTLKRKLKSEDQTFTELYNFARMSHAKKLLLSNRDIKIATVAEMCG 240

Query: 218 YHSVSYFIYVFRNYYGMTPTEYQE 241
           ++ VSYF+  F+ Y+G++P  Y++
Sbjct: 241 FNHVSYFVSCFKKYFGLSPLVYKK 264



>UniRef100_A3D9Y4 Transcriptional regulator, AraC family n=1
           Tax=Shewanella baltica OS155 RepID=A3D9Y4_SHEB5
          Length = 252

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 2/141 (1%)

Query: 100 LSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEW 159
           L Q+ +L  A+ ++   L   LLS  L D+  +  L    Q ++      +++ + +  W
Sbjct: 111 LLQSLSLSLADSVQLHYLAALLLS--LPDKRSVNWLYGHTQRSVTQAALALMSVSPSAPW 168

Query: 160 TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH 219
               IA +L MS + L++KL  E+TS+ QLL E R+   L ++   G  + +VA++CGY 
Sbjct: 169 QQEEIADKLHMSTASLRRKLVLEDTSFRQLLVEVRLSHGLAMLQNSGEPLLQVALACGYQ 228

Query: 220 SVSYFIYVFRNYYGMTPTEYQ 240
           S   F   F+  +G+TP  Y+
Sbjct: 229 SAEKFSLRFKQQFGLTPAAYR 249



>UniRef100_UPI000197857F two component AraC family transcriptional
           regulator n=1 Tax=Clostridiales bacterium 1_7_47_FAA
           RepID=UPI000197857F
          Length = 528

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQ 200
           N+ +RV   IN N A + +L  ++  + +SP    K  ++E   ++ + LT  R+  A++
Sbjct: 427 NVVSRVKNYINENYAQDVSLDDVSRLVDISPYYFSKLFKQEVGENFIEYLTRTRITHAMR 486

Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
           L+    +SIK V + CGY   +YF  +F+ Y GMTP+EY+ER
Sbjct: 487 LLEDSRYSIKEVCLMCGYSDPNYFSRIFKKYEGMTPSEYRER 528



>UniRef100_P43464 Transcriptional activator aggR n=3 Tax=Escherichia
           coli RepID=AGGR_ECOLX
          Length = 265

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 47/187 (25%), Positives = 94/187 (50%), Gaps = 5/187 (2%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQ-EVAQLSQNKNLRYAEML 112
           +S DTL      LK+  + ++   KV +    + S+ I V   + + L   K++ + +  
Sbjct: 76  LSSDTLR----RLKDALMIIYGISKVDACSCPNWSKGIIVADADDSVLDTFKSIDHNDDS 131

Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172
           R  + +  L+S    +   I  +          +V   I  +++  WTLA IA E  +S 
Sbjct: 132 RITSDLIYLISKIENNRKIIESIYISAVSFFSDKVRNTIEKDLSKRWTLAIIADEFNVSE 191

Query: 173 SLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232
             ++K+L  E  +++Q+L + RM +A  L++ + + I +++   G+ S SYFI +F  ++
Sbjct: 192 ITIRKRLESEYITFNQILMQSRMSKAALLLLDNSYQISQISNMIGFSSTSYFIRLFVKHF 251

Query: 233 GMTPTEY 239
           G+TP ++
Sbjct: 252 GITPKQF 258



>UniRef100_UPI000190681C probable transcriptional regulator protein,
           AraC family n=1 Tax=Rhizobium etli GR56
           RepID=UPI000190681C
          Length = 283

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/96 (36%), Positives = 56/96 (58%)

Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200
           P +  R+  +I ++ A +WTL   A    MS + L++KL  E+TS+S++L++ RM RAL 
Sbjct: 162 PRLEDRLRQMIESDTAFDWTLGHAARAFNMSEATLRRKLAAEKTSFSEILSDTRMNRALA 221

Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           LI      + +VA+  GY S S F   F+  +G+ P
Sbjct: 222 LIQTTTLPMAQVALEVGYDSPSQFSARFKERFGVNP 257



>UniRef100_UPI0001905319 probable transcriptional regulator protein,
           AraC family n=1 Tax=Rhizobium etli Kim 5
           RepID=UPI0001905319
          Length = 190

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/96 (36%), Positives = 56/96 (58%)

Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200
           P +  R+  +I ++ A +WTL   A    MS + L++KL  E+TS+S++L++ RM RAL 
Sbjct: 69  PRLEDRLRQMIESDTAFDWTLGHAARAFNMSEATLRRKLAAEKTSFSEILSDTRMNRALA 128

Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           LI      + +VA+  GY S S F   F+  +G+ P
Sbjct: 129 LIQTTTLPMAQVALEVGYDSPSQFSARFKERFGVNP 164



>UniRef100_B3C9G8 Sensor protein n=1 Tax=Bacteroides intestinalis DSM
            17393 RepID=B3C9G8_9BACE
          Length = 1288

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 4/136 (2%)

Query: 107  RYAEMLRKRALIF--ALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAH-EWTLAR 163
            R   ++R R ++   AL  +  E++    +L N L      +   VI+NN+ + ++    
Sbjct: 1152 RIKSLMRNREIVREKALKLIKPENDEQQVILANELNDQFVKKAVEVIHNNMQNLDFDKES 1211

Query: 164  IASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
             A E+ +S SLL KK++     S  + +   R+ RAL+L+  H ++I  V+  CGY S+S
Sbjct: 1212 FAMEMHVSGSLLYKKIKALTGQSPIEFIKSIRLNRALELLQSHKYTITEVSELCGYSSIS 1271

Query: 223  YFIYVFRNYYGMTPTE 238
            YF  VF+ Y+G +PTE
Sbjct: 1272 YFSTVFKKYFGKSPTE 1287



>UniRef100_A3J4H6 Two-component system sensor histidine
           kinase/response regulator, hybrid ('one component
           system') n=1 Tax=Flavobacteria bacterium BAL38
           RepID=A3J4H6_9FLAO
          Length = 254

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 47/196 (23%), Positives = 98/196 (50%), Gaps = 11/196 (5%)

Query: 61  LFLPMLKEEALNLHAH--KKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALI 118
           L +P++  E L L     +K   +     + D+    ++ QL    N    +  + + L+
Sbjct: 57  LMMPIMSGEELFLKIRNFRKFDQIPFLIITADVTFESKIKQLQNGVNDFINKPFKIQELV 116

Query: 119 FALLSVFLEDEHFIPLLLN-VLQPNMRTR-------VCTVINNNIAHEWTLARIASELLM 170
             + +     E+ I  + N V +  +++R       +  ++  NI  + T+ ++ASE+ +
Sbjct: 117 LKIQNFLQYKENIIKQVQNPVSKIQVKSRKNDFFDKIDDIVIRNIKTDVTIEKLASEIFV 176

Query: 171 SPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229
           S S + KK+R+ ++ + S  + E R+  A++LI     ++  +A+ CG++S SYF   F+
Sbjct: 177 SKSTIDKKIRKFKQVNVSTYIREIRLNYAIKLIESGEVNVDTLAIECGFNSTSYFSVCFK 236

Query: 230 NYYGMTPTEYQERSAQ 245
           NY G++P +Y  +  Q
Sbjct: 237 NYSGLSPKKYINQKIQ 252



>UniRef100_P43460 HTH-type transcriptional activator csvR n=1
           Tax=Escherichia coli RepID=CSVR_ECOLX
          Length = 301

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/124 (28%), Positives = 71/124 (57%), Gaps = 1/124 (0%)

Query: 116 ALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLL 175
           ALI+ +  +   D+    L ++ +      +V  VI  +++ +WTLA IA    +S   +
Sbjct: 138 ALIYLISKIKCNDKIIESLYMSSIT-FFTDKVRGVIEKDLSRKWTLAIIADVFNVSEITI 196

Query: 176 KKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMT 235
           +K+L  E+T+++Q+L + RM +A  L++ + + I +++   G  S SYFI +F  ++G+T
Sbjct: 197 RKRLESEDTNFNQILMQSRMSKAALLLLENSYQISQISNMIGISSASYFIRIFNKHFGVT 256

Query: 236 PTEY 239
            + +
Sbjct: 257 RSSF 260



>UniRef100_C0AZC3 Putative uncharacterized protein n=1 Tax=Proteus
           penneri ATCC 35198 RepID=C0AZC3_9ENTR
          Length = 151

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 2/102 (1%)

Query: 158 EWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCG 217
           +W L  +A  L  +PS L++ L +E  S+ QLL + RM  AL  +    +++ +++  CG
Sbjct: 38  KWHLEDVAKTLFTTPSTLRRHLSKEGVSFCQLLLDVRMGIALNYLTFSNYTVFQISHRCG 97

Query: 218 YHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAASIVAQ 259
           + S +YF   F+  YGMTP++++ +S Q  SN  SA + +++
Sbjct: 98  FGSNAYFCDAFKRKYGMTPSQFRVQSRQ--SNDPSAITKLSE 137



>UniRef100_UPI00019694C8 hypothetical protein BACCELL_02042 n=1
            Tax=Bacteroides cellulosilyticus DSM 14838
            RepID=UPI00019694C8
          Length = 1288

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 106  LRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAH-EWTLARI 164
            +R  E++R++AL   L+    +++  I  L N L  +   +   VI+NN+ + ++     
Sbjct: 1157 MRNREIVREKAL--KLIKSDSDEQQVI--LNNELNDHFVKKAVEVIHNNMQNLDFDKESF 1212

Query: 165  ASELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223
            A E+ +S SLL KK++     S    +   R+ RAL+L+  H ++I  V+  CGY S+SY
Sbjct: 1213 AMEMHVSGSLLYKKIKALTGQSPIDFIKSIRLNRALELLQSHKYTITEVSELCGYSSISY 1272

Query: 224  FIYVFRNYYGMTPTE 238
            F  VF+ Y+G +PTE
Sbjct: 1273 FSTVFKKYFGKSPTE 1287



>UniRef100_UPI000191377F putative AraC family regulatory protein n=3
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           RepID=UPI000191377F
          Length = 156

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/130 (31%), Positives = 73/130 (56%)

Query: 54  VSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           VSR+ +  +L  L ++  +L   ++ +  L+        +F+  A+ S  +        R
Sbjct: 24  VSRNNIKDYLQFLNKDLSHLPVWQRNADPLLTATCLTPDIFRVAARYSAMETPDEIVSER 83

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
            RAL+F +LS FL+ + FI LL+++L+  +   V  +I ++I  +W L+ +AS L +SPS
Sbjct: 84  TRALLFTVLSRFLDHKKFISLLMHMLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSPS 143

Query: 174 LLKKKLREEE 183
           LLKKK ++ E
Sbjct: 144 LLKKKAQKRE 153



>UniRef100_B0UQ60 Transcriptional regulator, AraC family n=1
           Tax=Methylobacterium sp. 4-46 RepID=B0UQ60_METS4
          Length = 222

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/93 (31%), Positives = 56/93 (60%)

Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205
           R+  +++ ++A +WT+ R+A+ L + P+ L++++R E+T    ++   R+   L L+   
Sbjct: 123 RIHDIVSEDVAGQWTVERLAARLAVGPTTLRRRIRAEDTGIRSVVERTRLGHGLHLVQTT 182

Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
              I R+A  CGY S S F + F+  +G+TP+E
Sbjct: 183 MEPIGRIAERCGYLSQSRFTHRFKRLFGVTPSE 215



>UniRef100_A8S4U5 Putative uncharacterized protein n=1
           Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S4U5_9CLOT
          Length = 407

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 11/177 (6%)

Query: 70  ALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKN-LRYAEMLRKRALIFALLSVFLED 128
           +LN    K   +  +H    DI +    A L +N N +R AE  + + +I A      ++
Sbjct: 237 SLNTMLRKSAETTGIHPVYLDI-ISSNFAMLIENANSIREAEECKSQ-MISAYCRFVRKN 294

Query: 129 EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL-REEETSYS 187
                  L+   P +R  V T I  ++A + TLA IA  + +SPS L +   RE   S S
Sbjct: 295 R------LDQYSPLVRKAV-TYIRIHLADQLTLAGIAKGIRVSPSYLSRLFNRETGDSVS 347

Query: 188 QLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244
             +T+ R+++A  L+   G SI+ +A   G+  ++YF   F+ Y  MTPTEY+  S+
Sbjct: 348 NFITKARVEKAAGLLSFSGMSIQNIAFYVGFGDLNYFSRCFKKYKKMTPTEYRASSS 404



>UniRef100_UPI0000F30067 putative transcriptional regulator
           AraC/XylS family protein n=1 Tax=Acinetobacter baumannii
           ATCC 17978 RepID=UPI0000F30067
          Length = 194

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/103 (34%), Positives = 57/103 (55%)

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           +  ++  RV T+I+ +++ E T   IA++L MS S L++KL+ E  S   +    R+   
Sbjct: 87  MNKSLSERVQTLISYHLSTELTAEFIAAQLFMSSSTLRRKLKSEGNSIQDIRNRVRLGHG 146

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241
           L LI     SI  +A  CGY S S F   F+N +G+TP E ++
Sbjct: 147 LHLIQTTNNSIGNIAFECGYQSQSRFTEQFKNLFGITPRELRK 189



>UniRef100_B2I0Q2 AraC-type DNA-binding domain-containing protein
           n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I0Q2_ACIBC
          Length = 270

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/103 (34%), Positives = 57/103 (55%)

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           +  ++  RV T+I+ +++ E T   IA++L MS S L++KL+ E  S   +    R+   
Sbjct: 163 MNKSLSERVQTLISYHLSTELTAEFIAAQLFMSSSTLRRKLKSEGNSIQDIRNRVRLGHG 222

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241
           L LI     SI  +A  CGY S S F   F+N +G+TP E ++
Sbjct: 223 LHLIQTTNNSIGNIAFECGYQSQSRFTEQFKNLFGITPRELRK 265



>UniRef100_A3M9Q0 Putative transcriptional regulator AraC/XylS
           family protein n=1 Tax=Acinetobacter baumannii ATCC
           17978 RepID=A3M9Q0_ACIBT
          Length = 270

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/103 (34%), Positives = 57/103 (55%)

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           +  ++  RV T+I+ +++ E T   IA++L MS S L++KL+ E  S   +    R+   
Sbjct: 163 MNKSLSERVQTLISYHLSTELTAEFIAAQLFMSSSTLRRKLKSEGNSIQDIRNRVRLGHG 222

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241
           L LI     SI  +A  CGY S S F   F+N +G+TP E ++
Sbjct: 223 LHLIQTTNNSIGNIAFECGYQSQSRFTEQFKNLFGITPRELRK 265



>UniRef100_A6B243 Transcriptional activator of virulence loci n=1
           Tax=Vibrio parahaemolyticus AQ3810 RepID=A6B243_VIBPA
          Length = 247

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 6/107 (5%)

Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205
           R+  +I+  I H WT   I+  L MS + L +++ +E+T+ S L+   RM +A  L++  
Sbjct: 137 RIHRLISKQIQHRWTAEEISKNLNMSKATLMRRISQEKTTLSDLILSARMNKAAYLLLKK 196

Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP------TEYQERSAQR 246
              IK+VA   G+ S SYF   F+  YG +P       +Y+++  QR
Sbjct: 197 KHPIKKVAHLTGFSSASYFCKKFKETYGNSPKQFVNLMDYKQKETQR 243



>UniRef100_UPI0001902531 probable transcriptional regulator protein,
           AraC family n=1 Tax=Rhizobium etli Brasil 5
           RepID=UPI0001902531
          Length = 229

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 34/103 (33%), Positives = 57/103 (55%)

Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200
           P +  R+  +I ++ A++WTL   A    MS +  ++KL  E+T +S++L++ RM RAL 
Sbjct: 120 PRLEDRLRQMIESDTAYDWTLGHAARAFNMSEATFRRKLAAEKTGFSEILSDTRMNRALG 179

Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243
           LI      + +VA+  GY S S F   F+  +G+ P   +  S
Sbjct: 180 LIQTTTLPMAQVALEVGYDSPSQFSARFKERFGVNPRHVRSGS 222



>UniRef100_B5ZYE2 Transcriptional regulator, AraC family n=1
           Tax=Rhizobium leguminosarum bv. trifolii WSM2304
           RepID=B5ZYE2_RHILW
          Length = 284

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 35/103 (33%), Positives = 58/103 (56%)

Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200
           P +  R+  +I ++ A +WTLA  A    MS + L+++L  E T +S++L++ RM RAL 
Sbjct: 162 PRLEDRLRQMIESDPAFDWTLAHAARSFNMSEATLRRRLAAENTGFSEILSDTRMNRALG 221

Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243
           LI      + +VA+  GY S S F   F+  +G++P   +  S
Sbjct: 222 LIHTTTLPMAQVALEVGYDSPSQFSARFKERFGVSPRHVRSGS 264



>UniRef100_Q2BYZ8 Transcriptional regulator, AraC family protein n=1
           Tax=Photobacterium sp. SKA34 RepID=Q2BYZ8_9GAMM
          Length = 293

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 1/109 (0%)

Query: 137 NVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQ 196
           N  +P  RT +  +I  +   +W++  +A  L  + S L++ L +E  S+SQLL + RM 
Sbjct: 163 NYDEPKERT-IARLITQDPQRKWSVDDMAKALFTTQSTLRRHLAKEGVSFSQLLLDVRMG 221

Query: 197 RALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
            AL  +    +SI +++   G+ S +YF   F+  YG+TP++++  S Q
Sbjct: 222 LALNYLTFSNYSISQISNRSGFGSAAYFCDAFKRKYGITPSQFRTTSRQ 270



>UniRef100_UPI000190274D probable transcriptional regulator protein,
           AraC family n=1 Tax=Rhizobium etli 8C-3
           RepID=UPI000190274D
          Length = 202

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 34/103 (33%), Positives = 56/103 (54%)

Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200
           P +  R+  +I ++ A +WTL   A    MS + L++KL  E T +S++L++ RM RAL 
Sbjct: 81  PRLEDRLRQMIESDTAFDWTLRHAARAFNMSEATLRRKLAAENTGFSEILSDTRMNRALA 140

Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243
           L+      + +VA+  GY S S F   F+  +G+ P   +  S
Sbjct: 141 LVQTTTLPMAQVALEVGYDSPSQFSARFKERFGVNPRHVRNGS 183



>UniRef100_C0MC33 Response regulator protein n=1 Tax=Streptococcus
           equi subsp. equi 4047 RepID=C0MC33_STRE4
          Length = 494

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 15/172 (8%)

Query: 77  KKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLL 136
           K VS LL     R  P+      LS  K +  ++ + +   I + L   LE      L  
Sbjct: 320 KHVSFLLFSDIYRQFPILDRTTYLSMVKTIHDSQSIDQ---ILSALKKVLE------LTS 370

Query: 137 NVLQPNMR-----TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLL 190
              QP  R     +   T I    + E TL  ++  L ++   L ++ + E E S+SQ L
Sbjct: 371 KSNQPQKRYSDLVSEAITCIQEEYSQELTLKAVSDRLHINGVYLGQRFKNETECSFSQYL 430

Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
            + R+Q+A QL++    SI  +A   GY++  YFI +F+   G++P E+++R
Sbjct: 431 NQVRIQKAQQLLLYTNKSINEIAYETGYNTNHYFIKMFKKLNGLSPKEFRDR 482



>UniRef100_B3PYH1 Probable transcriptional regulator protein, AraC
           family n=1 Tax=Rhizobium etli CIAT 652
           RepID=B3PYH1_RHIE6
          Length = 283

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 34/103 (33%), Positives = 56/103 (54%)

Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200
           P +  R+  +I ++ A +WTL   A    MS + L++KL  E T +S++L++ RM RAL 
Sbjct: 162 PRLEDRLRQMIESDTAFDWTLRHAARAFNMSEATLRRKLAAENTGFSEILSDTRMNRALA 221

Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243
           L+      + +VA+  GY S S F   F+  +G+ P   +  S
Sbjct: 222 LVQTTTLPMAQVALEVGYDSPSQFSARFKERFGVNPRHVRNGS 264



>UniRef100_Q1ZQR4 Transcriptional regulator, AraC family protein n=1
           Tax=Vibrio angustum S14 RepID=Q1ZQR4_9VIBR
          Length = 293

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 1/109 (0%)

Query: 137 NVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQ 196
           N  +P  RT +  +I  +   +W++  +A  L  + S L++ L +E  S+SQLL + RM 
Sbjct: 163 NYDEPKERT-IARLITQDPQRKWSVDDMAKALFTTQSTLRRHLAKEGVSFSQLLLDVRMG 221

Query: 197 RALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
            AL  +    +SI ++    G+ S +YF   F+  YG+TP++++  S Q
Sbjct: 222 LALNYLTFSNYSISQIGNRSGFGSTAYFCDAFKRKYGITPSQFRTTSRQ 270



>UniRef100_C3MCY3 Transcriptional regulator, AraC family n=1
           Tax=Rhizobium sp. NGR234 RepID=C3MCY3_RHISN
          Length = 284

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 36/98 (36%), Positives = 52/98 (53%)

Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200
           P ++ R+  +I    AH WTL   A    MS + L++KL  E TS+++ L++ RM RAL 
Sbjct: 162 PLLQNRLRQMIEAEPAHNWTLGHAARSFNMSEATLRRKLAAENTSFTETLSDTRMTRALA 221

Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
           L+      I  VA   GY S S F   F+  +G+ P E
Sbjct: 222 LLQTTTLPIAHVAQEVGYDSPSQFSARFKERFGINPRE 259



>UniRef100_C0D1T3 Putative uncharacterized protein n=1
           Tax=Clostridium asparagiforme DSM 15981
           RepID=C0D1T3_9CLOT
          Length = 361

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 1/91 (1%)

Query: 153 NNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSIKR 211
           N    E+TL  +A  L++SP+ L  + +EE  T + + L E RM+RA  L+      I  
Sbjct: 269 NYFRSEFTLQTLAETLMVSPNYLSARFKEETGTGFVRFLNEKRMERAKGLLADVSRKIYE 328

Query: 212 VAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
           VA  CG   V YF  +F+ Y GMTP EY+++
Sbjct: 329 VACQCGIEDVRYFTRLFKEYAGMTPKEYRDK 359



>UniRef100_B0J2D3 Helix-turn-helix-domain containing protein AraC
           type n=1 Tax=Rhizobium leguminosarum bv. trifolii
           WSM1325 RepID=B0J2D3_RHILT
          Length = 284

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 10/184 (5%)

Query: 58  TLSLFLP-MLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQL----SQNKNLRYAEML 112
           TL+L +P  L EEA +      V S  V   + D+P  +E A L     Q  NL      
Sbjct: 79  TLALPVPRQLFEEAYSRMGSIAVPSRPVPAVTSDLP--EEAAALFDYCCQPGNLTRLPGA 136

Query: 113 RKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSP 172
             +A +  L++ F        +L     P +  R+  +I ++ A +WTL   A    MS 
Sbjct: 137 IAKARLLELITWFALGG---AVLGQCQSPRLEDRLRQMIESDTAFDWTLGHAARSFNMSE 193

Query: 173 SLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232
           + L++KL  E T ++++L++ RM RAL LI      + ++A+  GY S S F   F+  +
Sbjct: 194 ATLRRKLAAESTGFTEILSDTRMNRALGLIQTTTLPMAQIALEVGYDSPSQFAARFKERF 253

Query: 233 GMTP 236
           G+ P
Sbjct: 254 GVNP 257



>UniRef100_UPI000190990B probable transcriptional regulator protein,
           AraC family n=1 Tax=Rhizobium etli IE4771
           RepID=UPI000190990B
          Length = 283

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 33/96 (34%), Positives = 55/96 (57%)

Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200
           P +  R+  +I ++ A +WTL   A    MS + L++KL  E+TS+S++L++ +M RAL 
Sbjct: 162 PRLEDRLRQMIESDTAFDWTLGHAARAFNMSEATLRRKLAAEKTSFSEILSDTKMNRALA 221

Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           LI      + +V +  GY S S F   F+  +G+ P
Sbjct: 222 LIQTTTLPMAQVGLEVGYDSPSQFSARFKERFGVNP 257



>UniRef100_Q6D4D4 Putative AraC-family transcriptional regulator n=1
           Tax=Pectobacterium atrosepticum RepID=Q6D4D4_ERWCT
          Length = 288

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 32/99 (32%), Positives = 56/99 (56%)

Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRAL 199
           QP + T++  +I+      WT       L MS + L+++L  E+T +  LL E RMQ A+
Sbjct: 188 QPGVSTQLRALISEEPERHWTAQSAGRLLAMSEATLRRRLSAEQTRFELLLLETRMQHAM 247

Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
            L+    ++++R+A +CGY S + F   F+  +G +PT+
Sbjct: 248 MLVQTTSWNMQRLAEACGYKSSARFSERFKTRFGCSPTK 286



>UniRef100_B3CBW2 Sensor protein n=1 Tax=Bacteroides intestinalis DSM
            17393 RepID=B3CBW2_9BACE
          Length = 1319

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 47/182 (25%), Positives = 94/182 (51%), Gaps = 23/182 (12%)

Query: 90   DIPVFQEVAQLSQNKNLRYAEMLRKRALI--FALLSVFLEDEHFIPLLLN---------- 137
            +IPV    A++S++  +   EM     +   F+L  +F   EH + L L           
Sbjct: 1138 NIPVILLTARISKSAEMTGYEMGADAYIAKPFSLALLFNRVEHLLALQLQRQKEFQQNIE 1197

Query: 138  ---------VLQPNMRTRVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLRE-EETSY 186
                      L  ++  R+   I  N+++ E+++A ++ +++MS   L +KL+     S 
Sbjct: 1198 VNPQKLTITPLDEDLLNRILACIEKNLSNSEYSIADLSKDVMMSRMNLYRKLQAITGQSP 1257

Query: 187  SQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246
            +  +   R+++A QL++ + ++I  VA + G+++ SYF  VF+  +G+TPT+Y E+S Q 
Sbjct: 1258 TDFVKTIRLKKAAQLLLENRYTIVEVAYTVGFNTPSYFTRVFKEQFGITPTQYLEKSGQN 1317

Query: 247  LS 248
            ++
Sbjct: 1318 VT 1319



>UniRef100_B1EFR0 Regulatory protein rns n=1 Tax=Escherichia
           albertii TW07627 RepID=B1EFR0_9ESCH
          Length = 262

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 29/94 (30%), Positives = 57/94 (60%)

Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205
           ++ + I  +++ +W L  +A E  +S   ++K+L  E  S++Q+L + RM RA  LI+ +
Sbjct: 163 KIRSAIEKDLSKKWKLNILADEFNVSEITIRKRLEIENISFNQILVQARMTRAATLILEN 222

Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            + I +++   G  S SYFI +F  ++G+TP ++
Sbjct: 223 SYQIAQISNMVGISSTSYFIRLFNKHFGVTPKQF 256



>UniRef100_UPI0001909F00 probable transcriptional regulator protein,
           AraC family n=1 Tax=Rhizobium etli CIAT 894
           RepID=UPI0001909F00
          Length = 236

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 32/96 (33%), Positives = 56/96 (58%)

Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200
           P +  R+  +I ++ A +WTL   A    MS + L+++L  E +S+S++L++ RM RAL 
Sbjct: 114 PRLEDRLRQMIESDTAFDWTLGHAARSFNMSEATLRRRLAGENSSFSEILSDTRMNRALA 173

Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           L+      + +VA+  GY S S F   F+  +G++P
Sbjct: 174 LVQTTTLPMAQVALEVGYDSPSQFSARFKERFGVSP 209



>UniRef100_A0L217 Transcriptional regulator, AraC family n=1
           Tax=Shewanella sp. ANA-3 RepID=A0L217_SHESA
          Length = 252

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 28/238 (11%)

Query: 18  ILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRD------TLSLFLPMLKEEAL 71
           I+ ++ GE       D +  +A Q+ +     +  FV+R        + L LP       
Sbjct: 25  IIRVIQGEKSLLWQDDALAVNAEQLLLLPAGSHISFVNRPMSGRYRAVQLLLP------- 77

Query: 72  NLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIF---------ALL 122
               ++  S +++    R IP  +    +S++ +  +  +L    L           A L
Sbjct: 78  ----YELPSGVMLAATDRQIP--KPTQTISRSVDFAWNALLHSLTLALPTSVQMHYLAAL 131

Query: 123 SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE 182
            + L  +  +  L +    N+   V  ++  + +  W    IA +L MS + L++KL +E
Sbjct: 132 LLSLPQQASVNWLYSHKPANVSQAVLGLLGQHPSAPWQQEDIADKLHMSSASLRRKLAQE 191

Query: 183 ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           +TS+ QLL E R+ + L L+     S+ ++A++CGY S   F   F+  +G+TP  Y+
Sbjct: 192 DTSFRQLLAEVRLCQGLTLLQNSTDSVLQIALACGYLSAEKFSARFKQAFGLTPAAYR 249



>UniRef100_P0A2T2 Virulence regulon transcriptional activator virF
           n=8 Tax=Enterobacteriaceae RepID=VIRF_SHIDY
          Length = 262

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 31/251 (12%)

Query: 7   NCLIAYARHKYILTMVNGEYRYFNGGDLVFADAS-----QIRVDKCVENFVFVSRDTLSL 61
           N +I YA+   +      E    + G + F + +      I+    +  F  +S D  +L
Sbjct: 18  NYIILYAKRCSMTVSSGNETLTIDEGQIAFIERNIQINVSIKKSDSINPFEIISLDR-NL 76

Query: 62  FLPMLK-------------EEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRY 108
            L +++             EE   L+  KK+  L     S D+  F+ + ++   K   Y
Sbjct: 77  LLSIIRIMEPIYSFQHSYSEEKRGLN--KKIFLLSEEEVSIDL--FKSIKEMPFGKRKIY 132

Query: 109 AEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASEL 168
           +        +  LLS   ++E     +      +   ++  ++  NI   W L+ I++ L
Sbjct: 133 S--------LACLLSAVSDEEALYTSISIASSLSFSDQIRKIVEKNIEKRWRLSDISNNL 184

Query: 169 LMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVF 228
            +S   ++K+L  E+ ++ Q+L + RM  A +L++     I  V+   G  S SYFI  F
Sbjct: 185 NLSEIAVRKRLESEKLTFQQILLDIRMHHAAKLLLNSQSYINDVSRLIGISSPSYFIRKF 244

Query: 229 RNYYGMTPTEY 239
             YYG+TP ++
Sbjct: 245 NEYYGITPKKF 255



>UniRef100_Q1Z1H2 Transcriptional regulator, AraC family protein n=1
           Tax=Photobacterium profundum 3TCK RepID=Q1Z1H2_PHOPR
          Length = 283

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 38/142 (26%), Positives = 77/142 (54%), Gaps = 2/142 (1%)

Query: 105 NLRYAEMLRKRALIFALLSVFLED-EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLAR 163
           +L+  +   K++L+F L+++   + + F     N  +P  R  +  +I  +   +W++  
Sbjct: 129 DLQLEQCFLKQSLVFILMALDEANVDVFNVFRFNYDEPKERM-IARLITLDPKRKWSVDG 187

Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223
           +A  L  + S L++ L +E  S+SQLL + RM  AL  +    +SI +++   G+ S +Y
Sbjct: 188 MAKALFTTQSTLRRHLAKEGVSFSQLLLDIRMGIALNYLTFANYSISQISHCSGFGSAAY 247

Query: 224 FIYVFRNYYGMTPTEYQERSAQ 245
           F   F+  YG+TP++++  S +
Sbjct: 248 FCDAFKRKYGITPSQFRTNSRE 269



>UniRef100_UPI0001A446EF AraC family transcriptional regulator n=1
           Tax=Pectobacterium carotovorum subsp. brasiliensis
           PBR1692 RepID=UPI0001A446EF
          Length = 288

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/99 (32%), Positives = 55/99 (55%)

Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRAL 199
           QP +  ++  +I+      WT       L MS + L+++L  E+T +  LL E RMQ A+
Sbjct: 188 QPGVTAQLRALISEEPERHWTAQSAGRLLAMSEATLRRRLSAEQTRFEVLLLETRMQHAM 247

Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
            L+    +S++R+A +CGY S + F   F+  +G +PT+
Sbjct: 248 MLVQTTSWSMQRLAEACGYKSSARFSERFKTRFGCSPTK 286



>UniRef100_Q0I019 Transcriptional regulator, AraC family n=1
           Tax=Shewanella sp. MR-7 RepID=Q0I019_SHESR
          Length = 252

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 10/229 (4%)

Query: 18  ILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRD------TLSLFLPMLKEEAL 71
           I+ ++ GE       + +  +A Q+ +     +  FV+R        + L LP      +
Sbjct: 25  IIRVIQGEKSLLWQDEALAVNAEQLLLLPAGSHISFVNRPMSGRYRAVQLLLPYDLPPGI 84

Query: 72  NLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHF 131
            L A  +V        SR +        L  +  L     ++   L   LLS  L  +  
Sbjct: 85  MLAATDRVMPKPTQTISRSVDFAWNA--LLHSLTLALPTSVQMHYLAALLLS--LPQQIS 140

Query: 132 IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLT 191
           +  L +    N+   V  ++  + +  W    IA +L MS + L++KL +E+TS+ QLL 
Sbjct: 141 VNWLYSHKPANVSQAVLGLLGQHPSAPWQQEDIADKLHMSTASLRRKLAQEDTSFRQLLA 200

Query: 192 ECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           E R+ + L L+     S+ ++A++CGY S   F   F+  +G+TP  Y+
Sbjct: 201 EVRLCQGLTLLQNSTDSVLQIALACGYLSAEKFSARFKQAFGLTPAAYR 249



>UniRef100_Q769J8 Urease operon transcriptional activator n=1
           Tax=Vibrio parahaemolyticus RepID=Q769J8_VIBPA
          Length = 282

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 15/175 (8%)

Query: 85  HHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLL--------- 135
           HH     P++Q    L   +N +  +         AL    +E   F  LL         
Sbjct: 93  HHQFNRQPMYQLPTPLCVERNFQIMKETYNAVSEHALHMQLMEQGLFFILLTLNESGVDV 152

Query: 136 -----LNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLL 190
                 N  +P   T +  +I  +   +W +  IA  L  +PS L++ LR+E   +SQLL
Sbjct: 153 HNVFHFNYEEPKKET-IARLITQDPQRKWHIDDIAKLLFTTPSTLRRHLRKEGMVFSQLL 211

Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
            + RM  AL  +    +++ +++   G+ S +YF   F+  Y MTP +++ +S +
Sbjct: 212 LDVRMGLALNFLTFTNYTVSQISYRTGFGSSAYFCDAFKRKYSMTPLQFRVQSRE 266



>UniRef100_UPI0001850904 two-component response regulator n=1
           Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850904
          Length = 510

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 11/189 (5%)

Query: 57  DTLSLFLPMLKEEALNL-HAHKKVSSLL--VHHCSRDIPVFQEVAQLSQNKNLRYAEMLR 113
           D+L   +   ++E  NL HA ++V  LL        ++ +  E    S      Y +++R
Sbjct: 322 DSLVKLIHQFEQEQTNLNHAQQRVLELLWIASRVLHELGIEAEPPLYSAEVR-SYGQLMR 380

Query: 114 KRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPS 173
           +  L+  LL    E+ +        L+ +   ++   I +N   + +L  IA+++ +SP 
Sbjct: 381 ETNLLLQLLQQVYEEYY------EQLENDSIQQIKRYIIDNSHLDISLEGIAAKVNLSPI 434

Query: 174 LLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232
            + K  +++   +Y   LTECR+++A +L+     S+K +    GY   +YF  VF+  Y
Sbjct: 435 YISKLFKDQLGINYITFLTECRIEKAKKLMTDGEKSLKEITFEVGYQDPNYFSKVFKKLY 494

Query: 233 GMTPTEYQE 241
           G+TP EY++
Sbjct: 495 GVTPKEYRK 503



>UniRef100_B1LK31 Putative fimbrial operon positive regulatory
           protein FanR n=1 Tax=Escherichia coli SMS-3-5
           RepID=B1LK31_ECOSM
          Length = 276

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 9/176 (5%)

Query: 64  PMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLS 123
           P+L    L     KK+   ++    ++I  F+ +     N NL     + K A    LLS
Sbjct: 102 PLLLGHQLVSQIRKKIFFYILEETDKEI--FKRLI----NNNLPKHRQVYKIAY---LLS 152

Query: 124 VFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE 183
              E E  +  L          ++  +I ++++  W L  +   L MS   ++KKL +E 
Sbjct: 153 RIHEIEPLVYSLSVSTDITFTEKIKKIIESDLSRNWKLMDLRDILHMSEVSIRKKLEKEN 212

Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            +++ L+ + RM  A ++I      I  +A   GY S SYFI  F++Y+G+TP ++
Sbjct: 213 NNFNALVLDIRMHHAAKMITSTEKHINSIAYDVGYTSTSYFIRNFKSYFGITPKQF 268



>UniRef100_B7TXZ2 UreR (Fragment) n=1 Tax=Vibrio parahaemolyticus
           RepID=B7TXZ2_VIBPA
          Length = 160

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/136 (28%), Positives = 71/136 (52%), Gaps = 4/136 (2%)

Query: 112 LRKRALIFALLSVFLE--DEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169
           L ++ L F LL++     D H +    N  +P   T +  +I  +   +W +  IA  L 
Sbjct: 11  LMEQGLFFILLTLNESGVDVHNV-FHFNYEEPKKET-IARLITQDPQRKWHIDDIAKLLF 68

Query: 170 MSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229
            +PS L++ LR+E   +SQLL + RM  AL  +    +++ +++   G+ S +YF   F+
Sbjct: 69  TTPSTLRRHLRKEGMVFSQLLLDVRMGLALNFLTFTNYTVSQISYRTGFGSSAYFCDAFK 128

Query: 230 NYYGMTPTEYQERSAQ 245
             Y MTP +++ +S +
Sbjct: 129 RKYSMTPLQFRVQSRE 144



>UniRef100_A6GTF5 Transcriptional regulator, AraC family protein n=1
           Tax=Limnobacter sp. MED105 RepID=A6GTF5_9BURK
          Length = 342

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 3/112 (2%)

Query: 134 LLLNVLQP-NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLL-T 191
           LLL   +P N   RV  ++ +N    WT  ++AS   +S   L + LR+E+TSY  L  +
Sbjct: 229 LLLEQRRPSNWAARVTELLRSNPGQIWTCEQVASHFHLSSRTLMRYLRDEQTSYQTLRDS 288

Query: 192 ECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243
           E   Q  L L+V +  +++ VA+S GY  VS F   F+ ++GM+P  + E+S
Sbjct: 289 ELARQAKLSLLVSNN-TVESVALSLGYQEVSNFRRAFKRWFGMSPQAFIEQS 339



>UniRef100_A6D1Y4 Transcriptional regulator, AraC family protein n=1
           Tax=Vibrio shilonii AK1 RepID=A6D1Y4_9VIBR
          Length = 276

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 13/127 (10%)

Query: 128 DEHFIPLLLNVLQP-------NMRTR-----VCTVINNNIAHEWTLARIASELLMSPSLL 175
           DEH +  LL+  Q        N+R+      +C  I  N     T + IA    +SP+ L
Sbjct: 148 DEHLLMALLSYSQSMVSEPSDNLRSGDLYQGICIYIQENFHRTITRSSIAKRFHISPNHL 207

Query: 176 KKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGM 234
            +  R++   + +  +T  RM+RA  ++  + F ++ VA  CGY  V+YF  VF++  G 
Sbjct: 208 SRLFRQQGHMTLADYITWVRMERAKFMLKKYDFKLQEVATRCGYQDVNYFFRVFKSRTGQ 267

Query: 235 TPTEYQE 241
           TP+EY++
Sbjct: 268 TPSEYRQ 274



>UniRef100_C0MHD3 Response regulator protein n=1 Tax=Streptococcus
           equi subsp. zooepidemicus (strain H70)
           RepID=C0MHD3_STRS7
          Length = 494

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 15/172 (8%)

Query: 77  KKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLL 136
           K VS LL     R  P+      LS  K +  ++ + +   I + L   LE      L  
Sbjct: 320 KHVSFLLFSDIYRQFPILDRTTYLSMVKTIHDSQSIDQ---ILSALKKVLE------LTS 370

Query: 137 NVLQPNMR-----TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLL 190
              QP  R     +   T I    + E TL  ++  L ++   L +  + E E S+SQ L
Sbjct: 371 KSNQPKKRYSDLVSEAITCIQEEYSQELTLKAVSDRLHINGVYLGQCFKNETECSFSQYL 430

Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
            + R+Q+A QL++    SI  +A   GY++  YFI +F+   G++P E+++R
Sbjct: 431 NQVRIQKAQQLLLYTNKSINEIAYETGYNTNHYFIKMFKKLNGLSPKEFRDR 482



>UniRef100_A1TWU6 Transcriptional regulator, AraC family n=1
           Tax=Marinobacter aquaeolei VT8 RepID=A1TWU6_MARAV
          Length = 347

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/100 (33%), Positives = 57/100 (57%)

Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205
           RV  VI  +      LAR+AS L +S   LK++L+EEE S+  L+ + R++RA  L+   
Sbjct: 243 RVRRVIETSHPFPPKLARVASTLYVSERTLKRRLQEEEASFQALVDQVRLERARDLLAST 302

Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
             ++ ++A S GY   + F   F+ + G++P+ ++ R  Q
Sbjct: 303 TMNLSQIADSLGYADAANFTRAFKRWTGLSPSHFRNRELQ 342



>UniRef100_B7TXZ0 UreR (Fragment) n=1 Tax=Vibrio parahaemolyticus
           RepID=B7TXZ0_VIBPA
          Length = 160

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/136 (28%), Positives = 71/136 (52%), Gaps = 4/136 (2%)

Query: 112 LRKRALIFALLSVFLE--DEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELL 169
           L ++ L F LL++     D H +    N  +P   T +  +I  +   +W +  IA  L 
Sbjct: 11  LLEQGLFFILLTLNESGVDVHNV-FHFNYEEPKKET-IARLITQDPQRKWHIDDIAKLLF 68

Query: 170 MSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFR 229
            +PS L++ LR+E   +SQLL + RM  AL  +    +++ +++   G+ S +YF   F+
Sbjct: 69  TTPSTLRRHLRKEGMVFSQLLLDVRMGLALNFLTFTNYTVSQISYRTGFGSSAYFCDAFK 128

Query: 230 NYYGMTPTEYQERSAQ 245
             Y MTP +++ +S +
Sbjct: 129 RKYSMTPLQFRVQSRE 144



>UniRef100_B3XEA9 Regulatory protein rns n=1 Tax=Escherichia coli
           101-1 RepID=B3XEA9_ECOLX
          Length = 262

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/94 (30%), Positives = 57/94 (60%)

Query: 146 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 205
           ++ + I  +++ +W L  IA +  +S   ++K+L  E  S++Q+L + RM RA  LI+ +
Sbjct: 163 KIRSAIEKDLSKKWKLNIIADQFNVSEITIRKRLEIENISFNQILLQARMTRAAILILEN 222

Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
            + I +++   G  S SYFI +F  ++G+TP ++
Sbjct: 223 SYQIAQISNMVGISSTSYFIRLFNKHFGVTPKQF 256



>UniRef100_A6FIN9 Putative transcriptional regulator, AraC/XylS
           family n=1 Tax=Moritella sp. PE36 RepID=A6FIN9_9GAMM
          Length = 268

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 5/130 (3%)

Query: 112 LRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171
           LRKR ++  L  +  ++     +L  V  P +  R+  +  +   H+ T+  I  +L MS
Sbjct: 139 LRKREIVELLCHMGYKE-----ILSMVGNPKVGHRLHDMFCDQDFHQLTIEHICDQLAMS 193

Query: 172 PSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNY 231
            S L++KL+ E TS  ++  + R+   L L+    +SI  +A  CGY S S F   F+  
Sbjct: 194 ESTLRRKLKTEGTSVQEIKDQARLGLGLHLLQTTHYSIVLIAEKCGYQSQSRFTERFKGR 253

Query: 232 YGMTPTEYQE 241
           +G+TP+E ++
Sbjct: 254 FGLTPSELRK 263



>UniRef100_A6B6J4 Putative CFA/I fimbrial subunit D n=2 Tax=Vibrio
           parahaemolyticus RepID=A6B6J4_VIBPA
          Length = 241

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 22/232 (9%)

Query: 12  YARHKYILTMV-NGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEA 70
           + RH +I+++  +G   + N    V  + +     K +  F F S +  S+ + +     
Sbjct: 18  FTRHNHIVSVDGDGILSFQNNITKVKPNEAIFIPSKVMVRFSFNSNENKSIKVSLYHING 77

Query: 71  LNLHAHK-KVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDE 129
           +NL+  + KV+SL        I  + EV +L+          L  R  I  L+   LE  
Sbjct: 78  INLNCKQDKVTSL--------INAYIEVEKLN----------LTNRETIIELIGSRLEKI 119

Query: 130 HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQL 189
               +L N     +  ++  +++ ++  +W+L  +      S S L +KL++ +TS  Q+
Sbjct: 120 KNNRVLYNY--DPLEKKIYRLVSKDLKKKWSLEEVCKLTYTSKSTLNRKLKDNQTSMGQI 177

Query: 190 LTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241
           ++  R+  A  LI     S+  +++  G++S SYF   F+  +G +P +Y++
Sbjct: 178 ISNARLDYATILITNTSLSVDEISMLSGFNSTSYFCKKFKESHGFSPKQYRK 229



>UniRef100_Q9FAT4 Urease operon transcriptional activator UreR n=1
           Tax=Vibrio parahaemolyticus RepID=Q9FAT4_VIBPA
          Length = 282

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)

Query: 85  HHCSRDIPVFQEVAQLSQNKNLRYAE-------------MLRKRALIFALLSVFLE--DE 129
           HH     P++Q    L   +N +  +              L ++ L F LL++     D 
Sbjct: 93  HHQFNHQPMYQLPTPLCVERNFQIMKETSNAISEHASHMQLLEQGLFFILLTLNESGVDV 152

Query: 130 HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQL 189
           H +    N  +P   T +  +I  +   +W +  IA  L  +PS L++ LR+E   +SQL
Sbjct: 153 HNV-FHFNYEEPKKET-IARLITQDPQRKWHIDDIAKLLFTTPSTLRRHLRKEGVIFSQL 210

Query: 190 LTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
           L + RM  AL  +    +++ +++   G+ S +YF   F+  Y +TP +++ +S +
Sbjct: 211 LLDVRMGLALNFLTFTNYTVSQISYRTGFGSSAYFCDAFKRKYSVTPLQFRVQSRE 266



>UniRef100_B7TXZ8 UreR (Fragment) n=1 Tax=Vibrio parahaemolyticus
           RepID=B7TXZ8_VIBPA
          Length = 160

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 1/109 (0%)

Query: 137 NVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQ 196
           N  +P   T +  +I  +   +W +  IA  L  +PS L++ LR+E   +SQLL + RM 
Sbjct: 37  NYEEPKKET-IARLITQDPQRKWHIDDIAKLLFTTPSTLRRHLRKEGMVFSQLLLDVRMG 95

Query: 197 RALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
            AL  +    +++ +++   G+ S +YF   F+  Y MTP +++ +S +
Sbjct: 96  LALNFLTFTNYTVSQISYRTGFGSSAYFCDAFKRKYSMTPLQFRVQSRE 144



>UniRef100_A4IP91 Two-component response regulator n=2
           Tax=Geobacillus RepID=A4IP91_GEOTN
          Length = 263

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/120 (27%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 135 LLNVLQPNMRTR-----VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQ 188
           L+N    + +TR         I++++  + +L  +A  + ++PS      +E+ + ++S+
Sbjct: 142 LINAFDQSSQTREPVREAIQFIDHHLKQDLSLKDVAEHVHLNPSYFSTLFKEQMKLTFSE 201

Query: 189 LLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLS 248
            LT  RMQRA +L++    ++  +A  CGY +  YFI +F+   G TP  Y++R  + +S
Sbjct: 202 YLTRRRMQRAKELLITTRMTVSEIAEECGYKTTKYFIRLFKEMEGETPNSYRKRQNKGVS 261



>UniRef100_Q8D7K7 AraC-type DNA-binding domain-containing protein
           n=1 Tax=Vibrio vulnificus RepID=Q8D7K7_VIBVU
          Length = 241

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 7/154 (4%)

Query: 99  QLSQNKNLRYAEMLRKRA------LIFALLSVFLEDE-HFIPLLLNVLQPNMRTRVCTVI 151
           ++ Q K++   E+ RK+       L  AL+++ +E +   + +++   Q +   ++   I
Sbjct: 84  RIDQLKDMLIEEVERKQNSQAQEHLALALMALMVEKQPELLNMIIRATQFSETQKIIQFI 143

Query: 152 NNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKR 211
            +NI  E +L  +A  + MS + LK++L  EE S+SQLL   R+  A   + +   SI  
Sbjct: 144 ESNIEEEISLETLAKHMGMSTATLKRRLAAEEMSFSQLLKIKRISHAATQLRVTDKSITT 203

Query: 212 VAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
           +A   G+ S ++F   F+    MTP E++ +  Q
Sbjct: 204 IAYESGFKSAAHFSTAFKAVQQMTPKEFRAKVQQ 237



>UniRef100_Q7MEL5 AraC-type DNA-binding domain-containing protein
           n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MEL5_VIBVY
          Length = 275

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 7/154 (4%)

Query: 99  QLSQNKNLRYAEMLRKRA------LIFALLSVFLEDE-HFIPLLLNVLQPNMRTRVCTVI 151
           ++ Q K++   E+ RK+       L  AL+++ +E +   + +++   Q +   ++   I
Sbjct: 118 RIDQLKDMLIEEVERKQNSQAQEHLALALMALMVEKQPELLNMIIRATQFSETQKIIQFI 177

Query: 152 NNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKR 211
            +NI  E +L  +A  + MS + LK++L  EE S+SQLL   R+  A   + +   SI  
Sbjct: 178 ESNIEEEISLETLAKHMGMSTATLKRRLAAEEMSFSQLLKIKRISHAATQLRVTDKSITT 237

Query: 212 VAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
           +A   G+ S ++F   F+    MTP E++ +  Q
Sbjct: 238 IAYESGFKSAAHFSTAFKAVQQMTPKEFRAKVQQ 271



>UniRef100_B4U4B3 TCS response regulator YesN-like n=1
           Tax=Streptococcus equi subsp. zooepidemicus MGCS10565
           RepID=B4U4B3_STREM
          Length = 494

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 15/172 (8%)

Query: 77  KKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLL 136
           K VS LL     R  P+      LS  K +  ++ + +  ++ AL  V       + L  
Sbjct: 320 KHVSFLLFSDIYRQFPILDRTTYLSMVKTIHDSQSIDQ--ILSALKKV-------LGLTS 370

Query: 137 NVLQPNMR-----TRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLL 190
              QP  R     +   T I    + E TL  ++  L ++   L +  + E E S+SQ L
Sbjct: 371 KSNQPKKRYSDLVSEAITCIQEEYSQELTLKAVSDRLHINGVYLGQCFKNETECSFSQYL 430

Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
            + R+Q+A QL++    SI  +A   GY++  YFI +F+   G++P E+++R
Sbjct: 431 NQVRIQKAQQLLLYTNKSINEIAYETGYNTNHYFIKMFKKLNGLSPKEFRDR 482



>UniRef100_B6EB34 RegA n=1 Tax=Citrobacter rodentium
           RepID=B6EB34_CITRO
          Length = 276

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/90 (33%), Positives = 52/90 (57%)

Query: 150 VINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSI 209
           +I  +++  W L  +A+ L MS   ++KKL +E  +++ L+ + RM  A +LI      I
Sbjct: 179 IIEADLSRSWRLVDLANILHMSEVSIRKKLEKESNNFNALVLDIRMYHAAKLITTSDKHI 238

Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
             +A   GY S SYFI  F+ ++G+TP ++
Sbjct: 239 NSIANEVGYTSTSYFIRNFKEFFGITPKQF 268



>UniRef100_B4X095 Transcriptional regulator, AraC family protein n=1
           Tax=Alcanivorax sp. DG881 RepID=B4X095_9GAMM
          Length = 336

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 12/123 (9%)

Query: 133 PLLLNVLQPNMRTRVCTVINNNIAHEW------------TLARIASELLMSPSLLKKKLR 180
           P+L  +L+   + R+ TV N+ +A +             TL  +AS L +S   L++KL 
Sbjct: 214 PVLTRMLEQQCQQRMDTVENSGLAGKVRQKLLGELGLGATLNDMASALALSTRSLRRKLE 273

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           +E TSY  L+ E R Q ALQL+      I+ +A   GY     F+  FR + G +P+ Y+
Sbjct: 274 QEGTSYRDLVEEERRQLALQLLDSTTMKIEELAAHLGYTDAGGFVRAFRRWEGCSPSAYR 333

Query: 241 ERS 243
           E++
Sbjct: 334 EKA 336



>UniRef100_Q4KDB9 Transcriptional regulator, AraC family n=1
           Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KDB9_PSEF5
          Length = 363

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/106 (30%), Positives = 58/106 (54%)

Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRAL 199
           +P    +V  ++N  +        +A ++  SPS L+++LR ++TSY QLL E R  RA 
Sbjct: 248 RPTWIDQVRRILNEQLHAVPDFDSLARQVHCSPSTLRRRLRAQDTSYQQLLDELRYARAQ 307

Query: 200 QLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
           QL+  H   I R+A + G+   + F + F+ + G+ P  +++ + Q
Sbjct: 308 QLLGQHSLPIYRIAEALGFKETASFRHAFQRWSGVAPGRFRQLAGQ 353



>UniRef100_Q2KDH2 Probable transcriptional regulator protein, AraC
           family n=1 Tax=Rhizobium etli CFN 42 RepID=Q2KDH2_RHIEC
          Length = 284

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/103 (33%), Positives = 58/103 (56%)

Query: 143 MRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLI 202
           +  R+  +I  + A  WTLA+ A    MS + L+++L  E T++S++LT+ RM RAL LI
Sbjct: 164 LEDRLRQMIEADPAAAWTLAQAARLFNMSEATLRRRLSGENTAFSEILTDTRMNRALALI 223

Query: 203 VIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
                 + +VA+  GY S S F   F+  +G++P   +  + Q
Sbjct: 224 QTTTLPMAQVALEVGYDSPSQFSARFKERFGVSPRHVRSGTEQ 266



>UniRef100_B8FUQ5 Transcriptional regulator, AraC family n=2
           Tax=Desulfitobacterium hafniense RepID=B8FUQ5_DESHD
          Length = 427

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSI 209
           I +N A   T+A  A  L +SPS L +  R++ + +++  LT  R+++A++L+    FS+
Sbjct: 333 ILHNHAQPLTIADAAQHLFISPSHLSRLFRQQLDCTFNDYLTRVRVEKAVELLKKPEFSV 392

Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
           K VA++ G+ + S+F  VFR Y G+TP  Y+
Sbjct: 393 KDVALAVGFQNQSHFAKVFRKYIGVTPLVYR 423



>UniRef100_C1HX61 Putative uncharacterized protein n=1 Tax=Neisseria
           gonorrhoeae 1291 RepID=C1HX61_NEIGO
          Length = 271

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/115 (26%), Positives = 62/115 (53%)

Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201
           N+  ++  +I  ++A +W+ A +A  L  S + L+++L  ++T++  LLT+ RM RAL L
Sbjct: 153 NLMRQIRKLITADVAADWSSAMLAQRLNCSEAALRRRLARQDTNFRTLLTDVRMMRALTL 212

Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAASI 256
           + +  +S+ ++A + GY   S F   F+  +G  P+  +  +      R    S+
Sbjct: 213 LQVTQWSVAQIAGAVGYDCPSRFSARFKELFGCVPSVVRSEAEPAAYRRTGQVSV 267



>UniRef100_UPI00019116CF bacterial regulatory protein, AraC family
           n=4 Tax=Salmonella enterica subsp. enterica serovar
           Typhi RepID=UPI00019116CF
          Length = 192

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LL   L D    PLL+   +  +  +V  +I  + A  WT   IA  L M  S L+++L+
Sbjct: 74  LLLALLHDGAAGPLLIE-RRYTLTEQVRQLIMLSPAKLWTAQEIARRLAMGTSTLRRRLQ 132

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
            E  SY Q++ E RM  AL  +      I  +A+ CGY S S F   FR +YG  P++
Sbjct: 133 RESQSYRQIIEEVRMSCALSQLQSTTLPIGEIALRCGYLSGSRFTARFRQHYGCLPSQ 190



>UniRef100_UPI000011E57D putative transcriptional regulator n=1
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           str. CT18 RepID=UPI000011E57D
          Length = 257

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LL   L D    PLL+   +  +  +V  +I  + A  WT   IA  L M  S L+++L+
Sbjct: 139 LLLALLHDGAAGPLLIE-RRYTLTEQVRQLIMLSPAKLWTAQEIARRLAMGTSTLRRRLQ 197

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
            E  SY Q++ E RM  AL  +      I  +A+ CGY S S F   FR +YG  P++
Sbjct: 198 RESQSYRQIIEEVRMSCALSQLQSTTLPIGEIALRCGYLSGSRFTARFRQHYGCLPSQ 255



>UniRef100_B6EKX1 HTH-type transcriptional regulator, AraC family
           n=1 Tax=Aliivibrio salmonicida LFI1238
           RepID=B6EKX1_ALISL
          Length = 259

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 46/221 (20%), Positives = 100/221 (45%), Gaps = 13/221 (5%)

Query: 24  GEYRYF--NGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPML---KEEALNLHAHKK 78
           G Y+Y   NG  ++    S++  +    N +F S+  +    P +   K+   N    K 
Sbjct: 38  GRYKYNLKNGDAILLGANSKLNFENIPINGLFFSKQIIFFKPPKVEFFKQTVKNFEVSKY 97

Query: 79  VSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNV 138
            +  L +     + +  +   + +N N R+        +    L + L +E+++ +L   
Sbjct: 98  RNIKLDYQLKMTLDLLHQSDVILKNINTRH--------MWLDGLYLLLAEEYYLQVLFLS 149

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
            + +   +V  V+      +  +  + S L +S + L ++L++  T + +++ + RM +A
Sbjct: 150 SEGSFNEKVYEVLEKMQPSDHKIENVCSILGVSKATLIRRLKKAGTQFKKIVRQVRMNKA 209

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
           L L+      ++ ++ SCGY SV   +  F+  +G+TP EY
Sbjct: 210 LFLMQKRELLLEDISFSCGYQSVELLVVYFKEEFGITPKEY 250



>UniRef100_B5R6D5 Putative transcriptional regulator n=1
           Tax=Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91 RepID=B5R6D5_SALG2
          Length = 259

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LL   L D    PLL+   +  +  +V  +I  + A  WT   IA  L M  S L+++L+
Sbjct: 141 LLLALLHDGAAGPLLIE-RRYTLTEQVRQLIMLSPAKLWTAREIARRLAMGTSTLRRRLQ 199

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
            E  SY Q++ E RM  AL  +      I  +A+ CGY S S F   FR +YG  P++
Sbjct: 200 RESQSYRQIIEEVRMSCALSQLQSTTLPIGEIALRCGYLSGSRFTARFRQHYGCLPSQ 257



>UniRef100_B5FR11 Bacterial regulatory protein, AraC family n=2
           Tax=Salmonella enterica subsp. enterica
           RepID=B5FR11_SALDC
          Length = 262

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LL   L D    PLL+   +  +  +V  +I  + A  WT   IA  L M  S L+++L+
Sbjct: 144 LLLALLHDGAAGPLLIE-RRYTLTEQVRQLIMLSPAKLWTAQEIARRLAMGTSTLRRRLQ 202

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
            E  SY Q++ E RM  AL  +      I  +A+ CGY S S F   FR +YG  P++
Sbjct: 203 RESQSYRQIIEEVRMSCALSQLQSTTLPIGEIALRCGYLSGSRFTARFRQHYGCLPSQ 260



>UniRef100_Q9F5Q9 Toxin co-regulated pilus virulence regulatory
           protein n=1 Tax=Vibrio cholerae RepID=Q9F5Q9_VIBCH
          Length = 277

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 9/169 (5%)

Query: 72  NLHAHKKVSSLLVHHCS-RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEH 130
           NL+  KK   LL+ +C   DI V  E+  +S     +Y+E   K  + F+     +E ++
Sbjct: 107 NLYNEKK--DLLLWNCELNDISVLGEI--VSTYDQTQYSEDFLK--IFFSGFFSKVEKKY 160

Query: 131 FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLL 190
               + + L  +   ++  ++ ++I   W  A I  EL  +  +LKK+L      + +L+
Sbjct: 161 NSIFITDDL--DAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELI 218

Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
              R+  ++ L+    F IK++A   G+ SVSYF  VF++   + P+EY
Sbjct: 219 NSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 267



>UniRef100_B7YCL8 Two component transcriptional regulator, AraC
           family n=2 Tax=Geobacillus RepID=B7YCL8_9BACI
          Length = 259

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 32/113 (28%), Positives = 62/113 (54%), Gaps = 6/113 (5%)

Query: 135 LLNVLQPNMRTR-----VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQ 188
           L+N L  + +TR         I+  +  + +L  +A  + ++PS      +E+ + ++S+
Sbjct: 142 LINALDRHPQTREPIREAIQFIDQRLKDDISLKDVAEHVHLNPSYFSTLFKEQMQLTFSE 201

Query: 189 LLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241
            LT  RMQRA +L++    ++  +A  CGY +  YFI++F+   G TP+ Y++
Sbjct: 202 YLTRRRMQRAKELLMTTDMTVAEIAEECGYRTAKYFIHLFKEMEGKTPSSYRK 254



>UniRef100_B7TY06 Truncated UreR (Fragment) n=1 Tax=Vibrio
           alginolyticus RepID=B7TY06_VIBAL
          Length = 153

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 1/109 (0%)

Query: 137 NVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQ 196
           N  +P   T +  +I  +   +W +  IA  L  +PS L++ LR+E   +SQLL + RM 
Sbjct: 37  NYEEPKKET-IARLITQDPQRKWHIDDIAKLLFTTPSTLRRHLRKEGVIFSQLLLDVRMG 95

Query: 197 RALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
            AL  +    +++ +++   G+ S +YF   F+  Y +TP +++ +S +
Sbjct: 96  LALNFLTFTNYTVSQISYRTGFGSSAYFCDAFKRKYSVTPLQFRVQSRE 144



>UniRef100_B4T211 Bacterial regulatory protein, AraC family n=6
           Tax=Salmonella enterica subsp. enterica
           RepID=B4T211_SALNS
          Length = 262

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LL   L D    PLL+   +  +  +V  +I  + A  WT   IA  L M  S L+++L+
Sbjct: 144 LLLALLHDGAAGPLLIE-RRYTLTEQVRQLIMLSPAKLWTAQEIARRLAMGTSTLRRRLQ 202

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
            E  SY Q++ E RM  AL  +      I  +A+ CGY S S F   FR +YG  P++
Sbjct: 203 RESQSYRQIIEEVRMSCALSQLQSTTLPIGEIALRCGYLSGSRFTARFRQHYGCLPSQ 260



>UniRef100_A3UUH2 Transcriptional regulator n=1 Tax=Vibrio
           splendidus 12B01 RepID=A3UUH2_VIBSP
          Length = 279

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIH 205
           +C  I  N   + T   IAS   +S + L +  R++   + ++ +T  R+ RA  ++  +
Sbjct: 182 ICIYIQENFHRQITRDSIASRFSISSNHLSRMFRQQGHMTLAEYITRVRVDRAKFMLKKY 241

Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
            F +  VAV CG+  V+YF  VF+N  G TPTEY+
Sbjct: 242 NFKLNEVAVRCGFKDVNYFCRVFKNRTGRTPTEYR 276



>UniRef100_Q5F813 Putative AraC-family transcriptional regulator n=1
           Tax=Neisseria gonorrhoeae FA 1090 RepID=Q5F813_NEIG1
          Length = 287

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 31/115 (26%), Positives = 62/115 (53%)

Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201
           N+  ++  +I  ++A +W+ A +A  L  S + L+++L  ++T++  LLT+ RM RAL L
Sbjct: 169 NLMRQIRKLITADMAADWSSAMLAQRLNCSEAALRRRLARQDTNFRTLLTDVRMMRALTL 228

Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAASI 256
           + +  +S+ ++A + GY   S F   F+  +G  P+  +  +      R    S+
Sbjct: 229 LQVTQWSVAQIAGAVGYDCPSRFSARFKELFGCVPSVVRSEAEPAAYRRTGQVSV 283



>UniRef100_B4RKY9 Putative AraC-family transcriptional regulator n=1
           Tax=Neisseria gonorrhoeae NCCP11945 RepID=B4RKY9_NEIG2
          Length = 271

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 31/115 (26%), Positives = 62/115 (53%)

Query: 142 NMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQL 201
           N+  ++  +I  ++A +W+ A +A  L  S + L+++L  ++T++  LLT+ RM RAL L
Sbjct: 153 NLMRQIRKLITADMAADWSSAMLAQRLNCSEAALRRRLARQDTNFRTLLTDVRMMRALTL 212

Query: 202 IVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAASI 256
           + +  +S+ ++A + GY   S F   F+  +G  P+  +  +      R    S+
Sbjct: 213 LQVTQWSVAQIAGAVGYDCPSRFSARFKELFGCVPSVVRSEAEPAAYRRTGQVSV 267



>UniRef100_Q09LZ6 Two-component response regulator n=1
           Tax=Geobacillus stearothermophilus RepID=Q09LZ6_BACST
          Length = 259

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 27/97 (27%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 151 INNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSI 209
           I+ ++  + +L  +A  + ++PS      +E+ + ++S+ LT  RMQRA +L++    ++
Sbjct: 163 IDRHLKDDISLKEVAEHVHLNPSYFSTLFKEQMKLTFSEYLTRRRMQRAKELLMTTDMAV 222

Query: 210 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQR 246
             +A  CGY +  YFI++F+   G TP+ Y++   ++
Sbjct: 223 SEIAEECGYKTAKYFIHLFKEMEGKTPSSYRKSQKEK 259



>UniRef100_B5NIA3 Bacterial regulatory protein n=1 Tax=Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433 RepID=B5NIA3_SALET
          Length = 262

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LL   L D    PLL+   +  +  +V  +I  + A  WT   IA  L M  S L+++L+
Sbjct: 144 LLLALLHDGAAGPLLIE-RRYTLTEQVRQLIMLSPAKLWTAQEIARRLAMGTSTLRRRLQ 202

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
            E  SY Q++ E RM  AL  +      I  +A+ CGY S S F   FR +YG  P++
Sbjct: 203 RESQSYRQIVEEVRMSCALSQLQSTTLPIGEIALRCGYLSGSRFTARFRQHYGCLPSQ 260



>UniRef100_B4TE08 Bacterial regulatory protein n=14 Tax=Salmonella
           enterica RepID=B4TE08_SALHS
          Length = 262

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LL   L D    PLL+   +  +  +V  +I  + A  WT   IA  L M  S L+++L+
Sbjct: 144 LLLALLHDGAAGPLLIE-RRYTLTEQVRQLIMLSPAKLWTAQEIARRLAMGTSTLRRRLQ 202

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
            E  SY Q++ E RM  AL  +      I  +A+ CGY S S F   FR +YG  P++
Sbjct: 203 RESQSYRQIVEEVRMSCALSQLQSTTLPIGEIALRCGYLSGSRFTARFRQHYGCLPSQ 260



>UniRef100_B0P9Q1 Putative uncharacterized protein n=1
           Tax=Anaerotruncus colihominis DSM 17241
           RepID=B0P9Q1_9FIRM
          Length = 326

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 7/114 (6%)

Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQ----LLTECRM 195
           Q N+  +  T I  ++    T+ ++   L +S +LLK   R+    Y Q     + ECRM
Sbjct: 199 QLNVARQANTYILTHLDEALTIDQLTQILCVSSTLLKTSFRQ---LYGQPIRKYIQECRM 255

Query: 196 QRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSN 249
           +RA +L+     S+  +++S GY SVS F  +F+ +Y +TP++Y+ ++ ++LSN
Sbjct: 256 RRAAELLSTTRQSVLDISISVGYGSVSQFGALFKRFYQVTPSQYRRKAEEKLSN 309



>UniRef100_A0Z3Z2 Transcriptional regulator, AraC family protein n=1
           Tax=marine gamma proteobacterium HTCC2080
           RepID=A0Z3Z2_9GAMM
          Length = 343

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 29/77 (37%), Positives = 46/77 (59%)

Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223
           IA  L MSP  L+++L+ E TSY +++ + RMQ A QL+     S   V ++CG+   S 
Sbjct: 254 IAQALHMSPRTLQRRLKAENTSYGEVVQQTRMQLAQQLLASPDISATEVGLACGFSDASA 313

Query: 224 FIYVFRNYYGMTPTEYQ 240
           F   F+ + G TP++Y+
Sbjct: 314 FTRAFKRWTGTTPSDYR 330



>UniRef100_Q5X3N2 Putative uncharacterized protein n=1
           Tax=Legionella pneumophila str. Paris RepID=Q5X3N2_LEGPA
          Length = 335

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 29/104 (27%), Positives = 60/104 (57%)

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+ +M +++ +++ N   +  ++  IAS L M+   L++ L+  + +Y +LL E R Q+A
Sbjct: 228 LKEDMASKIKSILINQNLNHASMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKA 287

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
              ++ +  S+  ++   G+   S F   F+ + G+TPTEY+E+
Sbjct: 288 KTFLLNNNISMTEISFLLGFQDTSNFSKAFKRWTGVTPTEYREK 331



>UniRef100_Q5WV20 Putative uncharacterized protein n=1
           Tax=Legionella pneumophila str. Lens RepID=Q5WV20_LEGPL
          Length = 335

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 29/104 (27%), Positives = 60/104 (57%)

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+ +M +++ +++ N   +  ++  IAS L M+   L++ L+  + +Y +LL E R Q+A
Sbjct: 228 LKEDMASKIKSILINQNLNHASMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKA 287

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
              ++ +  S+  ++   G+   S F   F+ + G+TPTEY+E+
Sbjct: 288 KTFLLNNNISMTEISFLLGFQDTSNFSKAFKRWTGITPTEYREK 331



>UniRef100_B9MLQ2 Two component transcriptional regulator, AraC
           family n=1 Tax=Anaerocellum thermophilum DSM 6725
           RepID=B9MLQ2_ANATD
          Length = 519

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 16/201 (7%)

Query: 48  VENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHH----CSRDIPVFQEVAQLSQN 103
           +EN++        L++ +  E  L     K +  LL+          I V + ++Q+  +
Sbjct: 324 IENYI---TQLCKLYIELFGENNLKYKVIKLIIMLLLETGIATSDESIDVEKLISQILNS 380

Query: 104 KNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLAR 163
              +  E+ +K     A+LS+F + +     ++N    N   +    IN N + E TL++
Sbjct: 381 SYEQIVEIFKK-----AVLSLFSKAKTKHEQIINNDSIN---KAIEFINQNYSEEITLSQ 432

Query: 164 IASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
           I+S    +P    K  ++    S+   LT+ R+Q+A QL+     SIK ++ + G+   +
Sbjct: 433 ISSTFNFNPYYFSKLFKKYTGVSFKTYLTKLRIQKACQLLKNTSKSIKEISFAVGFSDPN 492

Query: 223 YFIYVFRNYYGMTPTEYQERS 243
           YFI  F+ + GMTP+ ++  S
Sbjct: 493 YFIKAFKKFTGMTPSAFRSSS 513



>UniRef100_B7VSB9 Putative AraC-type regulatory protein n=1
           Tax=Vibrio splendidus LGP32 RepID=B7VSB9_VIBSL
          Length = 268

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 1/126 (0%)

Query: 121 LLSVFLED-EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179
           LLS+ +E     + ++  + +  +  +V   I  NI +  +L  +AS + MSP+ LK++L
Sbjct: 141 LLSLMVEQYPELLAIISRISRLTVTQKVIHYIEQNIENNISLDTLASYMGMSPATLKRRL 200

Query: 180 REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
             E+ S+S LL   R+  A   +     SI ++A   G+ S ++F   F+ Y+G TP ++
Sbjct: 201 SAEDLSFSNLLKIKRIAHAATQLRTSNKSITQIAYESGFKSAAHFSTAFKTYHGKTPKDF 260

Query: 240 QERSAQ 245
           +   +Q
Sbjct: 261 RSLVSQ 266



>UniRef100_A5IDK3 Transcriptional regulator OruR, AraC family n=1
           Tax=Legionella pneumophila str. Corby RepID=A5IDK3_LEGPC
          Length = 335

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 29/104 (27%), Positives = 60/104 (57%)

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+ +M +++ +++ N   +  ++  IAS L M+   L++ L+  + +Y +LL E R Q+A
Sbjct: 228 LKEDMASKIKSILINQNLNHASMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKA 287

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
              ++ +  S+  ++   G+   S F   F+ + G+TPTEY+E+
Sbjct: 288 KTFLLNNNISMTEISFLLGFQDTSNFSKAFKRWTGVTPTEYREK 331



>UniRef100_Q9F5R4 Toxin co-regulated pilus virulence regulatory
           protein n=1 Tax=Vibrio cholerae RepID=Q9F5R4_VIBCH
          Length = 276

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 9/169 (5%)

Query: 72  NLHAHKKVSSLLVHHCSR-DIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEH 130
           NL++  K   LL+ +C   DI V  EV  ++  + + Y++   K  + F+     +E ++
Sbjct: 106 NLYSENK--DLLLWNCEHNDIAVLSEV--VNGFREINYSDEFLK--VFFSGFFSKVEKKY 159

Query: 131 FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLL 190
               + + L  +   ++  ++ ++I   W  A I  EL  +  +LKK+L      + +L+
Sbjct: 160 NSIFITDDL--DAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELI 217

Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
              R+  ++ L+    F IK++A   G+ SVSYF  VF++   + P+EY
Sbjct: 218 NSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266



>UniRef100_Q9F5R1 Toxin co-regulated pilus virulence regulatory
           protein n=1 Tax=Vibrio cholerae RepID=Q9F5R1_VIBCH
          Length = 277

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 9/169 (5%)

Query: 72  NLHAHKKVSSLLVHHCS-RDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEH 130
           NL+  KK   LL+ +C   DI V  E+  +S     +Y+E   K  + F+     +E ++
Sbjct: 107 NLYNEKK--DLLLWNCELNDISVLGEI--VSTYDQTQYSEDFLK--IFFSGFFSKVEKKY 160

Query: 131 FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLL 190
               + + L  +   ++  ++ ++I   W  A I  EL  +  +LKK+L      + +L+
Sbjct: 161 NSIFITDDL--DAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELI 218

Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
              R+  ++ L+    F IK++A   G+ SVSYF  VF++   + P+EY
Sbjct: 219 NSIRISYSISLMKTGEFKIKQIAYLSGFASVSYFSTVFKSTMNVAPSEY 267



>UniRef100_Q9F5Q7 Toxin co-regulated pilus virulence regulatory
           protein n=1 Tax=Vibrio cholerae RepID=Q9F5Q7_VIBCH
          Length = 276

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 9/169 (5%)

Query: 72  NLHAHKKVSSLLVHHCSR-DIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEH 130
           NL++  K   LL+ +C   DI V  EV  ++  + + Y++   K  + F+     +E ++
Sbjct: 106 NLYSENK--DLLLWNCEHNDIAVLSEV--VNGFREINYSDEFLK--VFFSGFFSKVEKKY 159

Query: 131 FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLL 190
               + + L  +   ++  ++ ++I   W  A I  EL  +  +LKK+L      + +L+
Sbjct: 160 NSIFITDDL--DAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELI 217

Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
              R+  ++ L+    F IK++A   G+ SVSYF  VF++   + P+EY
Sbjct: 218 NSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266



>UniRef100_B7AFY7 Sensor protein n=1 Tax=Bacteroides eggerthii DSM
            20697 RepID=B7AFY7_9BACE
          Length = 1364

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 4/118 (3%)

Query: 136  LNVLQPNMRT--RVCTVINNNIAH-EWTLARIASELLMSPSLLKKKLRE-EETSYSQLLT 191
            L +  P+ R   R+  VIN+NIA+ E ++  +A  + +S   L +KL+E    S   L+ 
Sbjct: 1244 LEIESPDERLLDRIMKVINDNIANPELSVEMVAETVGISRVHLHRKLKELTNQSTRDLIR 1303

Query: 192  ECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSN 249
              R+++A  L+     SI  VA   G+ +V+YF   F+  YGMTPT Y E++A   S+
Sbjct: 1304 NLRLKQAASLLASKRQSINEVAALTGFTNVAYFSTAFKELYGMTPTAYMEQNAASASS 1361



>UniRef100_B5JTW9 Helix-turn-helix-domain containing protein, AraC
           type n=1 Tax=gamma proteobacterium HTCC5015
           RepID=B5JTW9_9GAMM
          Length = 350

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 6/109 (5%)

Query: 142 NMRTRVCTVINNNIAHEW-----TLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQ 196
           N+R  V  ++   I  +W     TL ++A +L MSP  LK++L+   TSY Q+    R +
Sbjct: 242 NVRNDVAGMVRLQI-QDWEGRLPTLEQVAEQLHMSPRTLKRRLQTAGTSYQQIKDSSRFR 300

Query: 197 RALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 245
           RA+  +     S++ +A   GY   S F   F+++  MTP+E+++R +Q
Sbjct: 301 RAIHQLEATDSSLESIAELLGYSDASNFTKAFKSWAEMTPSEFRQRLSQ 349



>UniRef100_A3XW16 AraC-type DNA-binding domain-containing protein
           n=1 Tax=Vibrio sp. MED222 RepID=A3XW16_9VIBR
          Length = 268

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 1/126 (0%)

Query: 121 LLSVFLED-EHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKL 179
           LLS+ +E     + ++  + +  +  +V   I  NI +  +L  +AS + MSP+ LK++L
Sbjct: 141 LLSLMVEQYPELLTIISRISRLTVTQKVIHYIEQNIENNISLDTLASYMGMSPATLKRRL 200

Query: 180 REEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
             E+ S+S LL   R+  A   +     SI ++A   G+ S ++F   F+ Y+G TP ++
Sbjct: 201 SAEDLSFSNLLKIKRIAHAATQLRTSNKSITQIAYESGFKSAAHFSTAFKTYHGKTPKDF 260

Query: 240 QERSAQ 245
           +   +Q
Sbjct: 261 RSLVSQ 266



>UniRef100_A3UL31 AraC-type DNA-binding domain-containing protein
           n=1 Tax=Vibrio splendidus 12B01 RepID=A3UL31_VIBSP
          Length = 268

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 7/129 (5%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRT----RVCTVINNNIAHEWTLARIASELLMSPSLLK 176
           LLS+ +E     P LL ++    R     +V   I  NI +  +L  +AS + MSP+ LK
Sbjct: 141 LLSLMVEQH---PALLVIIARASRLTVTQKVIHYIEQNIENNISLDTLASYMGMSPATLK 197

Query: 177 KKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           ++L  E+ S+S LL   R+  A   +     SI ++A   G+ S ++F   F+ Y+G TP
Sbjct: 198 RRLSAEDLSFSNLLKIKRIAHAATQLRTSNKSITQIAYESGFKSAAHFSTAFKTYHGKTP 257

Query: 237 TEYQERSAQ 245
            +++   AQ
Sbjct: 258 KDFRSLVAQ 266



>UniRef100_A3EID6 TCP pilus virulence regulatory protein n=1
           Tax=Vibrio cholerae V51 RepID=A3EID6_VIBCH
          Length = 276

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 9/169 (5%)

Query: 72  NLHAHKKVSSLLVHHCSR-DIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEH 130
           NL++  K   LL+ +C   DI V  EV  ++  + + Y++   K  + F+     +E ++
Sbjct: 106 NLYSENK--DLLLWNCEHNDIAVLSEV--VNGFREINYSDEFLK--VFFSGFFSKVEKKY 159

Query: 131 FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLL 190
               + + L  +   ++  ++ ++I   W  A I  EL  +  +LKK+L      + +L+
Sbjct: 160 NSIFITDDL--DAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELI 217

Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
              R+  ++ L+    F IK++A   G+ SVSYF  VF++   + P+EY
Sbjct: 218 NSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266



>UniRef100_A5F384 TCP pilus virulence regulatory protein n=14
           Tax=Vibrio cholerae RepID=TCPN_VIBC3
          Length = 276

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 9/169 (5%)

Query: 72  NLHAHKKVSSLLVHHCSR-DIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEH 130
           NL++  K   LL+ +C   DI V  EV  ++  + + Y++   K  + F+     +E ++
Sbjct: 106 NLYSENK--DLLLWNCEHNDIAVLSEV--VNGFREINYSDEFLK--VFFSGFFSKVEKKY 159

Query: 131 FIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLL 190
               + + L  +   ++  ++ ++I   W  A I  EL  +  +LKK+L      + +L+
Sbjct: 160 NSIFITDDL--DAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELI 217

Query: 191 TECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 239
              R+  ++ L+    F IK++A   G+ SVSYF  VF++   + P+EY
Sbjct: 218 NSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266



>UniRef100_Q5ZTY8 Transcriptional regulator OruR, AraC family n=1
           Tax=Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1 RepID=Q5ZTY8_LEGPH
          Length = 337

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/104 (27%), Positives = 59/104 (56%)

Query: 139 LQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRA 198
           L+ +M +++ +++ N   +  ++  IAS L M+   L++ L+  + +Y +LL E R Q+A
Sbjct: 230 LKEDMASKIKSILINQNLNHVSMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKA 289

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
              ++ +  S+  +    G+   S F   F+ + G+TPTEY+E+
Sbjct: 290 KTFLLNNNISMTEICFLLGFQDTSNFSKAFKRWTGITPTEYREK 333



>UniRef100_B7VT65 AraC-type DNA-binding domain-containing protein
           n=2 Tax=Vibrio RepID=B7VT65_VIBSL
          Length = 287

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIH 205
           +C  I  N   + T   IAS   +S + L +  R++   + ++ +T  R+ RA  ++  +
Sbjct: 190 ICIYIQENFHRQITRDSIASRFSISSNHLSRMFRQQGHMTLAEYITRVRVDRAKFMLKKY 249

Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
            F +  VA+ CG+  V+YF  VF+N  G TPTEY+
Sbjct: 250 NFKLNEVALRCGFKDVNYFCRVFKNRTGRTPTEYR 284



>UniRef100_B9D658 Transcriptional regulator, AraC family n=1
           Tax=Tolumonas auensis DSM 9187 RepID=B9D658_9GAMM
          Length = 286

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 4/136 (2%)

Query: 109 AEMLRKRALIFALLSVFLEDEHF---IPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIA 165
           ++M++  A    +L +  +  H    +P     L P++  R+  +I  ++A E +L+ +A
Sbjct: 149 SKMMQSSASTMVMLHLLQKYSHLNWKLPKFKGGLAPHVLNRIKELIRASLADELSLSILA 208

Query: 166 SELLMSPSLLKKKLRE-EETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYF 224
            E  +S     +  ++    S  Q +  CR++ A +L+     S+  +AVSCG++S S+F
Sbjct: 209 HEAKLSEYHFARMFKDCVGLSPHQYVMICRLEHAAKLLKDTPLSVIEIAVSCGFNSASHF 268

Query: 225 IYVFRNYYGMTPTEYQ 240
              F+  YG+TPT Y+
Sbjct: 269 AQQFKTKYGVTPTRYR 284



>UniRef100_A5KVM3 Transcriptional regulator n=1 Tax=Vibrionales
           bacterium SWAT-3 RepID=A5KVM3_9GAMM
          Length = 279

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 147 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIH 205
           +C  I  N   + T   IAS   +S + L +  R++   + ++ +T  R+ RA  ++  +
Sbjct: 182 ICIYIQENFHRQITRDSIASRFSISSNHLSRMFRQQGHMTLAEYITRVRVDRAKFMLKKY 241

Query: 206 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ 240
            F +  V+V CG+  V+YF  VF+N  G TPTEY+
Sbjct: 242 NFKLNEVSVRCGFKDVNYFCRVFKNRTGRTPTEYR 276



>UniRef100_B7V8F6 Probable transcriptional regulator n=4
           Tax=Pseudomonas aeruginosa RepID=B7V8F6_PSEA8
          Length = 337

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/84 (38%), Positives = 47/84 (55%)

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
           R+A  L +S   L+++L+EE TSY QLL + R   A Q +   G ++  VA   G+   S
Sbjct: 252 RVAQALHLSQRTLQRRLQEEGTSYQQLLDDTRRDMAEQYLQQPGLTLLEVAYLLGFADPS 311

Query: 223 YFIYVFRNYYGMTPTEYQERSAQR 246
            F   FR ++G TP EY+ R  +R
Sbjct: 312 NFFRAFRRWFGCTPNEYRARRQER 335



>UniRef100_A6T768 Bacterial regulatory protein, AraC family n=1
           Tax=Klebsiella pneumoniae subsp. pneumoniae MGH 78578
           RepID=A6T768_KLEP7
          Length = 262

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 1/116 (0%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LL    E  +  PLL+   Q ++  +V  +I  + A  W+++R+A  L +  S L+++L+
Sbjct: 144 LLLALYEAGYAGPLLVE-RQQDLSAQVRQLIMLSPAQAWSVSRVAKMLFLGESTLRRRLQ 202

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           +E  S+ Q++ E RM  AL  +      I  +A + GY S S F   FR +YG+ P
Sbjct: 203 QESQSFRQIVEEVRMAHALGQLQTTSRPIGEIAQNSGYQSGSRFTARFRQHYGLLP 258



>UniRef100_A4TFK9 Transcriptional regulator, AraC family n=1
           Tax=Mycobacterium gilvum PYR-GCK RepID=A4TFK9_MYCGI
          Length = 346

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
           R+A EL +S S LK++L EE T++ +L   C  + A+ L++    S  ++A   GY  ++
Sbjct: 265 RVADELSVSTSTLKRRLAEEGTTFRELRQSCLRESAMMLLITRSMSASQIATELGYGDLA 324

Query: 223 YFIYVFRNYYGMTPTEYQERSAQR 246
            F + F+ + G +P+EY  R +QR
Sbjct: 325 NFSHAFKRWTGRSPSEY--RRSQR 346



>UniRef100_B4AB72 Bacterial regulatory protein n=1 Tax=Salmonella
           enterica subsp. enterica serovar Newport str. SL317
           RepID=B4AB72_SALNE
          Length = 262

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 121 LLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLR 180
           LL   L D    PLL+   +  +  +V  +I  + A  WT   IA  L M  S L+++L+
Sbjct: 144 LLLALLHDGAAGPLLIE-RRYTLTEQVRQLIMLSPAKLWTAQEIARRLAMGTSTLRRRLQ 202

Query: 181 EEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTE 238
            E  SY Q++ E RM  AL  +      I  +A+ CGY S S F   FR +YG  P++
Sbjct: 203 RESQSYRQIVEEVRMFCALSQLQSTTLPIGEIALRCGYLSGSRFTARFRQHYGCLPSQ 260



>UniRef100_Q21JI5 Transcriptional regulator, AraC family n=1
           Tax=Saccharophagus degradans 2-40 RepID=Q21JI5_SACD2
          Length = 344

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/79 (37%), Positives = 45/79 (56%)

Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223
           +AS+L MS + L++KL+ + TSY +L  ECRM+ A  L+     S   +A   G+   S 
Sbjct: 266 VASQLHMSTTTLRRKLQNDNTSYQRLKDECRMEAAFHLLNCADLSNNEIAQKLGFDEPSA 325

Query: 224 FIYVFRNYYGMTPTEYQER 242
           F   F+ + G TP EY+ R
Sbjct: 326 FFRSFKKWTGQTPGEYRAR 344



>UniRef100_Q0TS33 Transcriptional regulator, AraC family n=1
           Tax=Clostridium perfringens ATCC 13124
           RepID=Q0TS33_CLOP1
          Length = 506

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/106 (27%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS-YSQLLTECRMQRA 198
           + ++  +V  +I N  + E +L  IA ++  +P+ L    ++E  S   + +T+ RM +A
Sbjct: 401 EKSIANKVIKIIKNEYSSELSLDYIADKVNFTPTYLSYVFKKETGSNIVKYITDFRMNKA 460

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244
            + +      I +V  +CGY + SYF  +F+NY+G+TP +++ +++
Sbjct: 461 KEFLEEGNMKIVQVGKACGYENQSYFNRIFKNYFGVTPNQFKRKNS 506



>UniRef100_B1RMC8 Transcriptional regulator, AraC family n=1
           Tax=Clostridium perfringens NCTC 8239 RepID=B1RMC8_CLOPE
          Length = 506

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/106 (27%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS-YSQLLTECRMQRA 198
           + ++  +V  +I N  + E +L  IA ++  +P+ L    ++E  S   + +T+ RM +A
Sbjct: 401 EKSIANKVIKIIKNEYSSELSLDYIADKVNFTPTYLSYVFKKETGSNIVKYITDFRMNKA 460

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244
            + +      I +V  +CGY + SYF  +F+NY+G+TP +++ +++
Sbjct: 461 KEFLEEGNMKIVQVGKACGYENQSYFNRIFKNYFGVTPNQFKRKNS 506



>UniRef100_B1BJF7 Transcriptional regulator, AraC family n=1
           Tax=Clostridium perfringens C str. JGS1495
           RepID=B1BJF7_CLOPE
          Length = 506

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/106 (27%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS-YSQLLTECRMQRA 198
           + ++  +V  +I N  + E +L  IA ++  +P+ L    ++E  S   + +T+ RM +A
Sbjct: 401 EKSIANKVIKIIKNEYSSELSLDYIADKVNFTPTYLSYVFKKETGSNIVKYITDFRMNKA 460

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244
            + +      I +V  +CGY + SYF  +F+NY+G+TP +++ +++
Sbjct: 461 KEFLEEGNMKIVQVGKACGYENQSYFNRIFKNYFGVTPNQFKRKNS 506



>UniRef100_A7VPJ4 Putative uncharacterized protein n=1
           Tax=Clostridium leptum DSM 753 RepID=A7VPJ4_9CLOT
          Length = 264

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 159 WTLARIASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCG 217
           WT+ ++AS + +SPS ++   ++    S    L + RM RA+Q++V+  + + ++A+ CG
Sbjct: 177 WTVKKMASFVNLSPSYVQSLYKKFFHISCVADLIKSRMDRAIQMLVVTDYPVNKIALLCG 236

Query: 218 YHSVSYFIYVFRNYYGMTPTEYQER 242
           Y S  YF   F+   GMTPTEY+++
Sbjct: 237 YESNIYFSRHFKAKIGMTPTEYRQK 261



>UniRef100_UPI000197BC5C hypothetical protein PROVRETT_02813 n=1
           Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BC5C
          Length = 272

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 11/218 (5%)

Query: 24  GEYRYFNGGDLVFAD-ASQIRVDKCVENFVFVSRDTLSLFLPMLK---EEALNLHAHKKV 79
           G ++     D+ F    S I +   ++N   ++ D L +   MLK   ++   L  +KK 
Sbjct: 47  GPWQILTAADICFLPKGSSIEIIN-LDNHNLLAVDVLPMTTDMLKSFYQQHAALFINKKK 105

Query: 80  SSLLVHHCSRDI---PVFQEVAQLS-QNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLL 135
           +  +   C   +   P+ ++V   + +  N   +  +    L F +LS FL    F   L
Sbjct: 106 THSISQICCTSLQENPIIEDVFHSAIKEANSPTSHNVIHIHLNF-ILSFFLLVNEFTSTL 164

Query: 136 LNVLQPNMRTRVCTVINNNIAHEW-TLARIASELLMSPSLLKKKLREEETSYSQLLTECR 194
              +  +++ +V  +I ++   +  TL  IA +L MSPS LK++L  E TS+S++    R
Sbjct: 165 YASMNISIKDKVYDLIFHSAGKQCHTLDTIAKKLHMSPSTLKRRLASEYTSFSKISLMSR 224

Query: 195 MQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYY 232
           M +A+ L       + R+A   GY  V YF+  F++++
Sbjct: 225 MNKAMILSRTENMPMTRIAQEVGYDDVPYFLLAFKSFH 262



>UniRef100_UPI0001913DAC bacterial regulatory protein, AraC family
           n=2 Tax=Salmonella enterica subsp. enterica serovar
           Typhi RepID=UPI0001913DAC
          Length = 113

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 31/80 (38%), Positives = 43/80 (53%)

Query: 159 WTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY 218
           WT   IA  L M  S L+++L+ E  SY Q++ E RM  AL  +      I  +A+ CGY
Sbjct: 32  WTAQEIARRLAMGTSTLRRRLQRESQSYRQIIEEVRMSCALSQLQSTTLPIGEIALRCGY 91

Query: 219 HSVSYFIYVFRNYYGMTPTE 238
            S S F   FR +YG  P++
Sbjct: 92  LSGSRFTARFRQHYGCLPSQ 111



>UniRef100_UPI00006DCC69 hypothetical protein CdifQ_04003106 n=1
           Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCC69
          Length = 289

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 59/253 (23%), Positives = 111/253 (43%), Gaps = 29/253 (11%)

Query: 12  YARHKY--ILTMVNGEYRYFNGG--------DLVFADASQIRVDKCVENFVFVSRDTLSL 61
           Y  H +  I+  +NG   YF  G        D++F   ++I     +++ VF  R  + +
Sbjct: 27  YHNHDFNKIIIFINGNVTYFVDGIPYKLKPWDILFISNNEIH-KPVIDSNVFYERIAIWI 85

Query: 62  FLPMLK---------EEALNLHAHKKVSSLLVH-HCSRDIPVFQEVAQLSQNKNLRYAEM 111
               +K         E+   +    K + L ++ H    I  F E   +S++ N  +   
Sbjct: 86  SPEFMKKNSDATSDLEKCFKIATENKCNRLRLNIHDIESIKSFIEQINISES-NTEFGNE 144

Query: 112 LRKRALIFALL----SVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASE 167
           + + AL   L+     +FL++E+ +    +V       +V   IN+NI  + ++  I+SE
Sbjct: 145 ILRNALFIQLMIFLNRIFLKNEN-MESTEDVFYDETIKKVLNYINSNIDDKLSIDSISSE 203

Query: 168 LLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226
             +S   L +K +    TS    + + R+  A  LI  +G+ +  V   CG++  S F+ 
Sbjct: 204 FFISKYYLMRKFKSHTGTSIHNYIVQKRLILAKSLIT-NGYLMSEVCNKCGFNDYSSFVR 262

Query: 227 VFRNYYGMTPTEY 239
            F+  YG++P  Y
Sbjct: 263 AFKKNYGVSPKNY 275



>UniRef100_Q87IW1 Putative transcriptional regulator, AraC/XylS
           family n=1 Tax=Vibrio parahaemolyticus
           RepID=Q87IW1_VIBPA
          Length = 266

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 29/79 (36%), Positives = 46/79 (58%)

Query: 161 LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHS 220
           L R+A    MS + L +KL++E T Y ++L E R+  AL L+    +++  +A  CGY S
Sbjct: 182 LERVAERFAMSRATLIRKLKQEGTQYREVLAEVRLNHALYLMQNGSYNVALLAQLCGYQS 241

Query: 221 VSYFIYVFRNYYGMTPTEY 239
              F   F+  +G+TP+EY
Sbjct: 242 EGRFSQRFKGKFGLTPSEY 260



>UniRef100_Q2SCQ2 AraC-type DNA-binding domain-containing protein
           n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCQ2_HAHCH
          Length = 276

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 33/104 (31%), Positives = 52/104 (50%)

Query: 144 RTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIV 203
           R +V  V+    A +W+L  I+  L +S S L+++L+ E   +  LL   R+   L L  
Sbjct: 167 RRKVSEVLMQEPAKDWSLLEISRLLAVSESTLRRRLQSENAGFRDLLESVRLGIGLHLAQ 226

Query: 204 IHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRL 247
                I  +A  CGY S S F   F+  +GMTP+E ++   + L
Sbjct: 227 TTLLPIAHIADQCGYQSQSRFTERFKQRFGMTPSELRQTRLEEL 270



>UniRef100_Q21KL2 Transcriptional regulator, AraC family n=1
           Tax=Saccharophagus degradans 2-40 RepID=Q21KL2_SACD2
          Length = 270

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 30/97 (30%), Positives = 51/97 (52%)

Query: 141 PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200
           P++  +V  +I+ ++ ++WT+  I  +L MS S +++KL  E TS   +    R+   L 
Sbjct: 165 PSLSAKVHAIISTDLTYDWTMDVITQKLAMSESTIRRKLTAEGTSLQAVKDSARLSFGLH 224

Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPT 237
            +      I  +A  CGY S S F   F+  +G+TPT
Sbjct: 225 QVQSTFQPINHIAEQCGYLSQSRFTNKFKQLFGVTPT 261



>UniRef100_A8EX63 Transcriptional regulator, AraC family n=1
           Tax=Arcobacter butzleri RM4018 RepID=A8EX63_ARCB4
          Length = 283

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 36/134 (26%), Positives = 70/134 (52%), Gaps = 1/134 (0%)

Query: 108 YAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASE 167
           +++ L K  +    L V  +DE  +    N +    + R+  ++ +N+    +   I S 
Sbjct: 147 FSKELLKLKIEELFLLVLQKDEKSLIQFFNKIINTTKDRIKYILESNLDFVNSFEDICSL 206

Query: 168 LLMSPSLLKKKLREEETSYSQL-LTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIY 226
              +PS ++K  ++E  +  +L + E R+++A  L+     +I ++A SCGY SVS+FI 
Sbjct: 207 TRQNPSKIRKYFKDEFNTTPKLWINEKRLEKATLLLKTTDETISQIATSCGYSSVSWFIL 266

Query: 227 VFRNYYGMTPTEYQ 240
            F+  Y +TP +Y+
Sbjct: 267 EFKKRYNLTPKDYR 280



>UniRef100_A6VXK4 Helix-turn-helix-domain containing protein AraC
           type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VXK4_MARMS
          Length = 353

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 1/118 (0%)

Query: 125 FLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLA-RIASELLMSPSLLKKKLREEE 183
           FL+   +  L++     +++++V  ++  + + E   A  +AS L MS S L+++L +E+
Sbjct: 222 FLKTAPYQLLVMVENDNSLKSQVMAMLGKDFSREMPSADEVASALNMSVSTLRRRLNDEK 281

Query: 184 TSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQE 241
           TSY  +  +CR + A+  +     SI  +A   G+   S F   F+ + GMTP EY++
Sbjct: 282 TSYQSIKDDCRKEAAITYMNAPQLSINDIAALMGFDEPSAFFRSFKKWTGMTPGEYRK 339



>UniRef100_A6V2K7 Probable transcriptional regulator n=1
           Tax=Pseudomonas aeruginosa PA7 RepID=A6V2K7_PSEA7
          Length = 337

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 31/80 (38%), Positives = 47/80 (58%)

Query: 163 RIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVS 222
           R+A  L +S   L+++L+EE TSY QLL + R + A Q +   G ++  VA   G+   S
Sbjct: 252 RVAQALHLSQRTLQRRLQEEGTSYQQLLDDTRREMAGQYLQQPGLTLLEVAYLLGFADPS 311

Query: 223 YFIYVFRNYYGMTPTEYQER 242
            F   FR ++G TP+EY+ R
Sbjct: 312 NFFRAFRRWFGCTPSEYRAR 331



>UniRef100_A6TUU3 Response regulator receiver protein n=1
           Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUU3_ALKMQ
          Length = 246

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 10/195 (5%)

Query: 61  LFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKR---AL 117
           + + ++  E   L A +++ + L   C   I  + + +   +   L   E L K    A 
Sbjct: 52  IIMDLMLAELDGLSAIEEIRNFLPESCIAIISAYSDFSYAQRAIRLNVHEYLLKPIKPAK 111

Query: 118 IFALLSVFLEDEHFI------PLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMS 171
           I ++L+  LE           P + N    +        IN +   + TL  +AS++ M+
Sbjct: 112 IKSILNKMLETPRDCDSFDKPPAVNNDEYKHFIKDSIAYINEHFKEKLTLEMVASKIYMN 171

Query: 172 PSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRN 230
           P    +  ++E   S+++ + + RM+ A +L+    + + R+A  CG+   SYF  VF +
Sbjct: 172 PKYFSQTFKKEVRISFTEYVVKLRMEFACKLLATTNYPVYRIATECGFSDPSYFNRVFCS 231

Query: 231 YYGMTPTEYQERSAQ 245
           +  MTP  Y+++  Q
Sbjct: 232 HMDMTPKAYRKKMNQ 246



>UniRef100_Q2BQP9 Probable transcriptional regulator n=1
           Tax=Neptuniibacter caesariensis RepID=Q2BQP9_9GAMM
          Length = 352

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 3/111 (2%)

Query: 142 NMRTRVCTVINNNIAHEWTLAR-IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ 200
           +++++V  +I  + + E   A  +A  L MS S L+++L EE+TSY ++  ECR   AL 
Sbjct: 241 SLKSQVVALIGKDFSQELPSAEEVAYRLHMSVSTLRRRLLEEDTSYQKIKDECRKMAALN 300

Query: 201 LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQ--ERSAQRLSN 249
            +     SI  VA   G+   S F   F+ + GMTP EY+  +   Q+L N
Sbjct: 301 YMNSPQLSINDVAGLMGFDEPSAFFRSFKKWTGMTPGEYRRSDTYCQQLEN 351



>UniRef100_B5CUG3 Sensor protein n=1 Tax=Bacteroides plebeius DSM
            17135 RepID=B5CUG3_9BACE
          Length = 1312

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 35/109 (32%), Positives = 63/109 (57%), Gaps = 2/109 (1%)

Query: 136  LNVLQPNMRTRVCTVINNNIAHE-WTLARIASELLMSPSLLKKKLRE-EETSYSQLLTEC 193
            LN L      +V  +I  N++ E   +A IA ++ MS S L +K++   E S ++ + + 
Sbjct: 1201 LNKLDQEFLDKVTAIIEENLSMEKMDVAFIADKMCMSHSTLYRKIKGLTEMSVNEYVRKI 1260

Query: 194  RMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQER 242
            +M++ ++LI    +S+  ++   G+ SV+YF   F++ YGM PTEY +R
Sbjct: 1261 KMKKGMELINEGKYSLAEISDLTGFSSVAYFRQCFKDEYGMAPTEYLKR 1309



>UniRef100_B3K740 Helix-turn-helix-domain containing protein AraC
           type n=1 Tax=Geobacillus sp. Y412MC10 RepID=B3K740_9BACI
          Length = 343

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 31/86 (36%), Positives = 48/86 (55%)

Query: 164 IASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSY 223
           +A E+ MS   L++KL +E TSY QLLT+ R ++A++ +      IK VA   GY   + 
Sbjct: 253 VAKEMGMSDRTLQRKLTDENTSYKQLLTQARHEQAIEYLADPSIDIKEVAFLIGYADQNS 312

Query: 224 FIYVFRNYYGMTPTEYQERSAQRLSN 249
           F   FR + G TP+ ++  +  R  N
Sbjct: 313 FYRAFRMWEGDTPSNWRAANGARSKN 338



>UniRef100_B1RCM9 Transcriptional regulator, AraC family n=1
           Tax=Clostridium perfringens CPE str. F4969
           RepID=B1RCM9_CLOPE
          Length = 506

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 29/105 (27%), Positives = 60/105 (57%), Gaps = 1/105 (0%)

Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS-YSQLLTECRMQRA 198
           + ++  +V  +I N  + E +L  IA ++  +P+ L    ++E  S   + +T+ RM +A
Sbjct: 401 EKSIANKVIKIIKNEYSSELSLDYIADKVNFTPTYLSYVFKKETGSNIVKYITDFRMNKA 460

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243
            + +      I +V  +CGY + SYF  +F+NY+G+TP +++ ++
Sbjct: 461 KEFLEEGNMKIVQVGKACGYENQSYFNRIFKNYFGVTPNQFKRKN 505



>UniRef100_B1BTJ3 Transcriptional regulator, AraC family n=1
           Tax=Clostridium perfringens E str. JGS1987
           RepID=B1BTJ3_CLOPE
          Length = 506

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 29/105 (27%), Positives = 60/105 (57%), Gaps = 1/105 (0%)

Query: 140 QPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETS-YSQLLTECRMQRA 198
           + ++  +V  +I N  + E +L  IA ++  +P+ L    ++E  S   + +T+ RM +A
Sbjct: 401 EKSIANKVIKIIKNEYSSELSLDYIADKVNFTPTYLSYVFKKETGSNIVKYITDFRMNKA 460

Query: 199 LQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERS 243
            + +      I +V  +CGY + SYF  +F+NY+G+TP +++ ++
Sbjct: 461 KEFLEEGNMKIVQVGKACGYENQSYFNRIFKNYFGVTPNQFKRKN 505



>UniRef100_A6B2H7 AraC-type DNA-binding domain-containing protein
           n=1 Tax=Vibrio parahaemolyticus AQ3810
           RepID=A6B2H7_VIBPA
          Length = 259

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 29/79 (36%), Positives = 46/79 (58%)

Query: 161 LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHS 220
           L R+A    MS + L +KL++E T Y ++L E R+  AL L+    +++  +A  CGY S
Sbjct: 175 LERVAERFAMSRATLIRKLKQEGTQYREVLAEVRLNHALYLMQNGSYNVALLAQLCGYQS 234

Query: 221 VSYFIYVFRNYYGMTPTEY 239
              F   F+  +G+TP+EY
Sbjct: 235 EGRFSQRFKGKFGLTPSEY 253



>UniRef100_UPI0001978F34 hypothetical protein Cbac1_15105 n=1
           Tax=Clostridiales bacterium 1_7_47_FAA
           RepID=UPI0001978F34
          Length = 444

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 9/176 (5%)

Query: 70  ALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDE 129
           +LN    K   +  +H    DI +    A L +N N    E+   ++ + ++   F++  
Sbjct: 274 SLNTMLRKSAETAGIHPVHLDI-ISSNFAMLIENSN-SLKELEEFKSQMISVYCRFVQKN 331

Query: 130 HFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREE-ETSYSQ 188
                 L+   P +R  + T I  ++A + TL RI+  + +SPS L +   +E   S S 
Sbjct: 332 R-----LDQYSPIIRKAI-TYIRIHLADQLTLKRISEGIRVSPSYLSRLFNQEVHESISN 385

Query: 189 LLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSA 244
            +T  R+ +A +L+     S++ +A   G+  ++YF   F+ +   TPT+Y+  SA
Sbjct: 386 YITRARIDKAAELLSFSRMSVQNIAFYVGFGDLNYFSRCFKKHKKKTPTQYRASSA 441



>UniRef100_UPI000196D410 hypothetical protein BRYFOR_04474 n=1
           Tax=Bryantella formatexigens DSM 14469