BLAST Search Results

Blast performed on June-30-2009
BLASTP 2.2.13 [Nov-27-2005]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: uniref100 
           8,325,145 sequences; 2,946,459,760 total letters



Query= EG11921 rluF 
         (290 letters)

Distribution of 2000 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef100_P32684 Ribosomal large subunit pseudouridine synthase ...   576   e-163 
UniRef100_A8A7B8 Pseudouridine synthase n=1 Tax=Escherichia coli...   573   e-162 
UniRef100_Q8X4L9 Ribosomal large subunit pseudouridine synthase ...   572   e-161 
UniRef100_Q83IR6 Ribosomal large subunit pseudouridine synthase ...   572   e-161 
UniRef100_B1LPI6 Pseudouridine synthase n=2 Tax=Escherichia coli...   570   e-161 
UniRef100_A7ZUN6 Pseudouridine synthase n=6 Tax=Escherichia coli...   570   e-161 
UniRef100_Q8FB47 Ribosomal large subunit pseudouridine synthase ...   569   e-161 
UniRef100_B7NFW5 Pseudouridine synthase n=1 Tax=Escherichia coli...   568   e-160 
UniRef100_B3I352 Pseudouridine synthase n=3 Tax=Escherichia coli...   568   e-160 
UniRef100_Q328P9 Pseudouridine synthase n=1 Tax=Shigella dysente...   568   e-160 
UniRef100_B7LKW6 Pseudouridine synthase n=1 Tax=Escherichia ferg...   567   e-160 
UniRef100_C1HQ43 23S rRNA pseudouridine synthase F n=1 Tax=Esche...   567   e-160 
UniRef100_Q0TA39 Pseudouridine synthase n=1 Tax=Escherichia coli...   565   e-159 
UniRef100_B1EQI4 Pseudouridine synthase n=1 Tax=Escherichia albe...   557   e-157 
UniRef100_C2BBJ9 Putative uncharacterized protein n=1 Tax=Citrob...   541   e-152 
UniRef100_C1MFE6 23S rRNA pseudouridine synthase F n=1 Tax=Citro...   541   e-152 
UniRef100_A8ANB1 Pseudouridine synthase n=1 Tax=Citrobacter kose...   534   e-150 
UniRef100_B5XY09 Pseudouridine synthase n=1 Tax=Klebsiella pneum...   531   e-149 
UniRef100_A6TGT0 Pseudouridine synthase n=1 Tax=Klebsiella pneum...   531   e-149 
UniRef100_Q8Z1V3 Ribosomal large subunit pseudouridine synthase ...   527   e-148 
UniRef100_B5PIZ4 Pseudouridine synthase n=1 Tax=Salmonella enter...   527   e-148 
UniRef100_B5FQN4 Pseudouridine synthase n=2 Tax=Salmonella enter...   526   e-148 
UniRef100_B5F1K6 Pseudouridine synthase n=1 Tax=Salmonella enter...   526   e-148 
UniRef100_B4T1N2 Pseudouridine synthase n=5 Tax=Salmonella enter...   526   e-147 
UniRef100_UPI000190C223 23S rRNA pseudouridine synthase F n=1 Ta...   525   e-147 
UniRef100_Q57H34 Pseudouridine synthase n=1 Tax=Salmonella enter...   525   e-147 
UniRef100_B5BJT7 Pseudouridine synthase n=2 Tax=Salmonella enter...   525   e-147 
UniRef100_B5MQL0 Pseudouridine synthase n=3 Tax=Salmonella enter...   524   e-147 
UniRef100_Q8ZKL1 Ribosomal large subunit pseudouridine synthase ...   524   e-147 
UniRef100_B5R7R2 Pseudouridine synthase n=1 Tax=Salmonella enter...   523   e-147 
UniRef100_C0Q496 Putative pseudouridine synthase n=1 Tax=Salmone...   522   e-146 
UniRef100_B3YH52 Pseudouridine synthase n=2 Tax=Salmonella enter...   522   e-146 
UniRef100_A9MHB0 Pseudouridine synthase n=1 Tax=Salmonella enter...   519   e-145 
UniRef100_B6F6E0 Pseudouridine synthase n=1 Tax=Enterobacter can...   517   e-145 
UniRef100_A4W5D6 Pseudouridine synthase n=1 Tax=Enterobacter sp....   500   e-140 
UniRef100_UPI000190CF24 23S rRNA pseudouridine synthase F n=1 Ta...   491   e-137 
UniRef100_B1JGR5 Pseudouridine synthase n=3 Tax=Yersinia pseudot...   472   e-131 
UniRef100_A7FL22 Pseudouridine synthase n=1 Tax=Yersinia pseudot...   470   e-131 
UniRef100_A1JLY7 Pseudouridine synthase n=1 Tax=Yersinia enteroc...   467   e-130 
UniRef100_B2VFA8 Pseudouridine synthase n=1 Tax=Erwinia tasmanie...   462   e-128 
UniRef100_UPI000191401C 23S rRNA pseudouridine synthase F n=2 Ta...   462   e-128 
UniRef100_B2Q0W3 Pseudouridine synthase n=1 Tax=Providencia stua...   462   e-128 
UniRef100_UPI00005F7CDD COG1187: 16S rRNA uridine-516 pseudourid...   458   e-127 
UniRef100_A8GIX6 Pseudouridine synthase n=1 Tax=Serratia proteam...   457   e-127 
UniRef100_UPI00005F9C30 COG1187: 16S rRNA uridine-516 pseudourid...   456   e-127 
UniRef100_UPI00005F8B08 COG1187: 16S rRNA uridine-516 pseudourid...   454   e-126 
UniRef100_B6X4U2 Pseudouridine synthase n=1 Tax=Providencia rust...   450   e-125 
UniRef100_B6XE97 Pseudouridine synthase n=1 Tax=Providencia alca...   447   e-124 
UniRef100_UPI000197C091 hypothetical protein PROVRETT_00710 n=1 ...   445   e-123 
UniRef100_A0KIR3 Pseudouridine synthase n=1 Tax=Aeromonas hydrop...   441   e-122 
UniRef100_UPI00005F96C5 COG1187: 16S rRNA uridine-516 pseudourid...   438   e-121 
UniRef100_A4SPC7 Pseudouridine synthase n=1 Tax=Aeromonas salmon...   436   e-120 
UniRef100_C0AUH3 Putative uncharacterized protein n=1 Tax=Proteu...   424   e-117 
UniRef100_B4EZB2 Pseudouridine synthase n=2 Tax=Proteus mirabili...   414   e-114 
UniRef100_Q12NE4 Pseudouridine synthase n=1 Tax=Shewanella denit...   389   e-106 
UniRef100_Q1N598 Pseudouridine synthase n=1 Tax=Bermanella maris...   388   e-106 
UniRef100_A1U7B5 Pseudouridine synthase n=1 Tax=Marinobacter aqu...   387   e-106 
UniRef100_A6F4D4 Pseudouridine synthase n=1 Tax=Marinobacter alg...   387   e-106 
UniRef100_Q087V2 Pseudouridine synthase n=1 Tax=Shewanella frigi...   385   e-105 
UniRef100_Q4FTF0 Pseudouridine synthase n=1 Tax=Psychrobacter ar...   384   e-105 
UniRef100_A6VZH0 Pseudouridine synthase n=1 Tax=Marinomonas sp. ...   384   e-105 
UniRef100_A6EBK9 Pseudouridine synthase n=1 Tax=Pedobacter sp. B...   383   e-104 
UniRef100_Q1QCB4 Pseudouridine synthase n=1 Tax=Psychrobacter cr...   379   e-103 
UniRef100_A3Y9Q9 Pseudouridine synthase n=1 Tax=Marinomonas sp. ...   378   e-103 
UniRef100_C1Z0A2 Ribosomal large subunit pseudouridine synthase ...   373   e-101 
UniRef100_A3JFV8 Pseudouridine synthase n=1 Tax=Marinobacter sp....   370   e-101 
UniRef100_A0YGV0 Pseudouridine synthase n=1 Tax=marine gamma pro...   369   e-100 
UniRef100_A8GHU2 Pseudouridine synthase n=1 Tax=Serratia proteam...   349   1e-94 
UniRef100_Q8XI11 Pseudouridine synthase n=1 Tax=Clostridium perf...   317   1e-84 
UniRef100_B1V3B9 Pseudouridine synthase n=1 Tax=Clostridium perf...   317   1e-84 
UniRef100_B1BMR9 Pseudouridine synthase n=2 Tax=Clostridium perf...   316   1e-84 
UniRef100_B1RPB5 Pseudouridine synthase n=1 Tax=Clostridium perf...   316   2e-84 
UniRef100_B1R7S1 Pseudouridine synthase n=1 Tax=Clostridium perf...   316   2e-84 
UniRef100_Q0SQN3 Pseudouridine synthase n=1 Tax=Clostridium perf...   314   7e-84 
UniRef100_Q0TMY7 Pseudouridine synthase n=2 Tax=Clostridium perf...   313   9e-84 
UniRef100_UPI000190A5CA 23S rRNA pseudouridine synthase F n=1 Ta...   302   2e-80 
UniRef100_A2U1D4 Pseudouridine synthase n=1 Tax=Polaribacter sp....   301   4e-80 
UniRef100_A4BZD0 Pseudouridine synthase n=1 Tax=Polaribacter irg...   297   7e-79 
UniRef100_Q7MMX9 Pseudouridine synthase n=1 Tax=Vibrio vulnificu...   296   1e-78 
UniRef100_Q8DFG6 Pseudouridine synthase n=1 Tax=Vibrio vulnificu...   296   1e-78 
UniRef100_A7MY75 Pseudouridine synthase n=1 Tax=Vibrio harveyi A...   295   3e-78 
UniRef100_A6FC27 Pseudouridine synthase n=1 Tax=Moritella sp. PE...   294   7e-78 
UniRef100_A7K6G9 Pseudouridine synthase n=1 Tax=Vibrio sp. Ex25 ...   293   1e-77 
UniRef100_A8TB14 Pseudouridine synthase n=1 Tax=Vibrio campbelli...   293   1e-77 
UniRef100_C1I9M3 Ribosomal large subunit pseudouridine synthase ...   292   2e-77 
UniRef100_Q87RM8 Pseudouridine synthase n=1 Tax=Vibrio parahaemo...   291   4e-77 
UniRef100_Q1V3A2 Pseudouridine synthase n=1 Tax=Vibrio alginolyt...   291   4e-77 
UniRef100_A5L8E0 Pseudouridine synthase n=1 Tax=Vibrionales bact...   291   4e-77 
UniRef100_B8KE46 Pseudouridine synthase n=1 Tax=Vibrio parahaemo...   291   6e-77 
UniRef100_B7VKI0 Pseudouridine synthase n=1 Tax=Vibrio splendidu...   290   8e-77 
UniRef100_A3Y4C1 Pseudouridine synthase n=1 Tax=Vibrio sp. MED22...   290   8e-77 
UniRef100_A3V067 Pseudouridine synthase n=1 Tax=Vibrio splendidu...   290   1e-76 
UniRef100_C1U3F7 Ribosomal large subunit pseudouridine synthase ...   289   2e-76 
UniRef100_A6DJV5 Pseudouridine synthase n=1 Tax=Lentisphaera ara...   289   2e-76 
UniRef100_A6D990 Pseudouridine synthase n=1 Tax=Vibrio shilonii ...   287   9e-76 
UniRef100_UPI00018512F0 tRNA pseudouridine synthase A n=1 Tax=Ba...   283   1e-74 
UniRef100_A8MHI9 Pseudouridine synthase n=1 Tax=Alkaliphilus ore...   282   2e-74 
UniRef100_C0Z4U9 Pseudouridine synthase n=1 Tax=Brevibacillus br...   282   2e-74 
UniRef100_A3J4W8 Pseudouridine synthase n=1 Tax=Flavobacteria ba...   282   3e-74 
UniRef100_A3HUQ5 Pseudouridine synthase n=1 Tax=Algoriphagus sp....   282   3e-74 
UniRef100_B1YKT4 Pseudouridine synthase n=1 Tax=Exiguobacterium ...   281   5e-74 
UniRef100_A6CL09 Pseudouridine synthase n=1 Tax=Bacillus sp. SG-...   281   5e-74 
UniRef100_B5FEZ5 Pseudouridine synthase n=2 Tax=Vibrio fischeri ...   281   6e-74 
UniRef100_C1S266 Pseudouridine synthase family protein n=1 Tax=C...   280   8e-74 
UniRef100_A2P6J1 Pseudouridine synthase n=1 Tax=Vibrio cholerae ...   280   8e-74 
UniRef100_C2I735 Ribosomal large subunit pseudouridine synthase ...   280   1e-73 
UniRef100_A4C4B7 Pseudouridine synthase n=1 Tax=Pseudoalteromona...   280   1e-73 
UniRef100_C0FVJ4 Putative uncharacterized protein n=1 Tax=Rosebu...   280   1e-73 
UniRef100_A4AV85 Pseudouridine synthase n=1 Tax=Flavobacteriales...   279   2e-73 
UniRef100_C2IRG0 Ribosomal large subunit pseudouridine synthase ...   278   3e-73 
UniRef100_C2HUZ3 Ribosomal large subunit pseudouridine synthase ...   278   3e-73 
UniRef100_B2D735 Pseudouridine synthase n=1 Tax=Vibrio cholerae ...   278   3e-73 
UniRef100_C3NNC4 Ribosomal large subunit pseudouridine synthase ...   278   3e-73 
UniRef100_A6XW27 Pseudouridine synthase n=1 Tax=Vibrio cholerae ...   278   3e-73 
UniRef100_A6AEY6 Pseudouridine synthase n=1 Tax=Vibrio cholerae ...   278   3e-73 
UniRef100_A3EKC6 Pseudouridine synthase n=1 Tax=Vibrio cholerae ...   278   3e-73 
UniRef100_C3LPM7 Pseudouridine synthase family 1 protein n=10 Ta...   278   3e-73 
UniRef100_A1SWW8 Pseudouridine synthase n=1 Tax=Psychromonas ing...   278   4e-73 
UniRef100_A6EPE0 Pseudouridine synthase n=1 Tax=unidentified eub...   278   4e-73 
UniRef100_B1HNP4 Pseudouridine synthase n=1 Tax=Lysinibacillus s...   278   5e-73 
UniRef100_A0M549 Pseudouridine synthase n=1 Tax=Gramella forseti...   278   5e-73 
UniRef100_Q1Z8C7 Pseudouridine synthase n=1 Tax=Photobacterium p...   278   5e-73 
UniRef100_Q2C7B7 Pseudouridine synthase n=1 Tax=Photobacterium s...   276   2e-72 
UniRef100_Q1ZRJ1 Pseudouridine synthase n=1 Tax=Vibrio angustum ...   276   2e-72 
UniRef100_Q15VC0 Pseudouridine synthase n=1 Tax=Pseudoalteromona...   275   3e-72 
UniRef100_A5FNF2 Pseudouridine synthase n=1 Tax=Flavobacterium j...   275   3e-72 
UniRef100_Q8RIU2 Pseudouridine synthase n=1 Tax=Flavobacterium j...   275   3e-72 
UniRef100_Q6LNM8 Pseudouridine synthase n=1 Tax=Photobacterium p...   275   4e-72 
UniRef100_Q1ZF07 Pseudouridine synthase n=1 Tax=Psychromonas sp....   275   4e-72 
UniRef100_A9KPL1 Pseudouridine synthase n=1 Tax=Clostridium phyt...   274   6e-72 
UniRef100_C0YIL6 Ribosomal large subunit pseudouridine synthase ...   274   6e-72 
UniRef100_A2TNK1 Pseudouridine synthase n=1 Tax=Dokdonia donghae...   274   6e-72 
UniRef100_B6FUK1 Pseudouridine synthase n=1 Tax=Clostridium nexi...   274   8e-72 
UniRef100_B2Q7M7 Pseudouridine synthase n=1 Tax=Exiguobacterium ...   273   1e-71 
UniRef100_B1DKA5 Pseudouridine synthase n=1 Tax=Paenibacillus sp...   273   1e-71 
UniRef100_B6EH90 Pseudouridine synthase n=1 Tax=Aliivibrio salmo...   271   5e-71 
UniRef100_Q487V0 Pseudouridine synthase n=1 Tax=Colwellia psychr...   270   9e-71 
UniRef100_A8VS89 Pseudouridine synthase n=1 Tax=Bacillus selenit...   270   9e-71 
UniRef100_A0XYG2 Pseudouridine synthase n=1 Tax=Alteromonadales ...   270   9e-71 
UniRef100_Q31A32 Pseudouridine synthase n=1 Tax=Prochlorococcus ...   270   1e-70 
UniRef100_B3KK95 Pseudouridine synthase n=1 Tax=Geobacillus sp. ...   269   2e-70 
UniRef100_A6GYY2 Pseudouridine synthase n=1 Tax=Flavobacterium p...   268   4e-70 
UniRef100_A2BRY4 Pseudouridine synthase n=1 Tax=Prochlorococcus ...   268   4e-70 
UniRef100_A2BXF0 Pseudouridine synthase n=1 Tax=Prochlorococcus ...   268   6e-70 
UniRef100_B5CLI6 Pseudouridine synthase n=1 Tax=Ruminococcus lac...   268   6e-70 
UniRef100_Q7V232 Pseudouridine synthase n=1 Tax=Prochlorococcus ...   267   1e-69 
UniRef100_A9DKT0 Pseudouridine synthase n=1 Tax=Kordia algicida ...   267   1e-69 
UniRef100_A7AXZ9 Pseudouridine synthase n=1 Tax=Ruminococcus gna...   266   1e-69 
UniRef100_A3UB21 Pseudouridine synthase n=1 Tax=Croceibacter atl...   266   1e-69 
UniRef100_B7Y5E1 Pseudouridine synthase n=1 Tax=Blautia hansenii...   266   2e-69 
UniRef100_Q3IC94 Pseudouridine synthase n=1 Tax=Pseudoalteromona...   266   2e-69 
UniRef100_A2C3A6 Pseudouridine synthase n=2 Tax=Prochlorococcus ...   265   3e-69 
UniRef100_C2W7Y2 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   265   3e-69 
UniRef100_A5Z9H6 Pseudouridine synthase n=1 Tax=Eubacterium vent...   265   3e-69 
UniRef100_A8UGS6 Pseudouridine synthase n=1 Tax=Flavobacteriales...   265   4e-69 
UniRef100_C3ALK7 Pseudouridine synthase n=3 Tax=Bacillus RepID=C...   265   5e-69 
UniRef100_Q738H8 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   263   1e-68 
UniRef100_C3H0W1 Pseudouridine synthase n=1 Tax=Bacillus thuring...   263   1e-68 
UniRef100_C3C284 Pseudouridine synthase n=2 Tax=Bacillus cereus ...   263   1e-68 
UniRef100_C2YAH3 Pseudouridine synthase n=4 Tax=Bacillus cereus ...   263   1e-68 
UniRef100_C2R7Z9 Pseudouridine synthase n=3 Tax=Bacillus cereus ...   263   1e-68 
UniRef100_A0RDY7 Pseudouridine synthase n=11 Tax=Bacillus cereus...   263   1e-68 
UniRef100_B9J0Q9 Pseudouridine synthase n=3 Tax=Bacillus cereus ...   263   1e-68 
UniRef100_C0CJ54 Putative uncharacterized protein n=1 Tax=Blauti...   263   1e-68 
UniRef100_Q3ELE6 Pseudouridine synthase n=1 Tax=Bacillus thuring...   263   2e-68 
UniRef100_C2WMA9 Pseudouridine synthase n=4 Tax=Bacillus cereus ...   263   2e-68 
UniRef100_Q813L9 Pseudouridine synthase n=2 Tax=Bacillus cereus ...   263   2e-68 
UniRef100_C2N0P1 Pseudouridine synthase n=3 Tax=Bacillus cereus ...   263   2e-68 
UniRef100_B7HR63 Pseudouridine synthase n=2 Tax=Bacillus cereus ...   263   2e-68 
UniRef100_C1EUD5 RNA pseudouridine synthase family protein n=13 ...   263   2e-68 
UniRef100_B7IW77 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   262   2e-68 
UniRef100_B5UTX3 Pseudouridine synthase n=2 Tax=Bacillus cereus ...   262   2e-68 
UniRef100_A3PDR6 Pseudouridine synthase n=1 Tax=Prochlorococcus ...   261   4e-68 
UniRef100_C2QSX9 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   261   4e-68 
UniRef100_C2PEY2 Pseudouridine synthase n=3 Tax=Bacillus cereus ...   261   4e-68 
UniRef100_C2VBN6 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   261   5e-68 
UniRef100_B7H5C9 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   261   7e-68 
UniRef100_C2YRK2 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   261   7e-68 
UniRef100_C2QBV8 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   261   7e-68 
UniRef100_C3DJQ9 Pseudouridine synthase n=1 Tax=Bacillus thuring...   259   2e-67 
UniRef100_C2Z7W9 Pseudouridine synthase n=2 Tax=Bacillus cereus ...   259   2e-67 
UniRef100_C2PVS8 Pseudouridine synthase n=2 Tax=Bacillus cereus ...   259   2e-67 
UniRef100_C0BI67 Pseudouridine synthase n=1 Tax=Flavobacteria ba...   259   2e-67 
UniRef100_C3A5R0 Pseudouridine synthase n=1 Tax=Bacillus mycoide...   259   2e-67 
UniRef100_B7RU12 Pseudouridine synthase n=1 Tax=marine gamma pro...   259   2e-67 
UniRef100_A9VF36 Pseudouridine synthase n=1 Tax=Bacillus weihens...   259   3e-67 
UniRef100_C0EY35 Putative uncharacterized protein n=1 Tax=Eubact...   259   3e-67 
UniRef100_B0QEF3 Pseudouridine synthase n=1 Tax=Bacillus anthrac...   258   6e-67 
UniRef100_C2XTW5 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   257   8e-67 
UniRef100_Q21MN5 Pseudouridine synthase n=1 Tax=Saccharophagus d...   256   1e-66 
UniRef100_B4RXU3 Pseudouridine synthase n=1 Tax=Alteromonas macl...   256   1e-66 
UniRef100_Q1PKX3 Pseudouridine synthase n=1 Tax=uncultured Proch...   256   1e-66 
UniRef100_A8G5N8 Pseudouridine synthase n=1 Tax=Prochlorococcus ...   255   3e-66 
UniRef100_B9P2N9 Pseudouridine synthase n=1 Tax=Prochlorococcus ...   254   5e-66 
UniRef100_B9EAA4 Pseudouridine synthase n=1 Tax=Macrococcus case...   254   5e-66 
UniRef100_A6TX48 Pseudouridine synthase n=1 Tax=Alkaliphilus met...   253   2e-65 
UniRef100_Q899L7 Pseudouridine synthase n=1 Tax=Clostridium teta...   252   2e-65 
UniRef100_Q26FB4 Pseudouridine synthase n=1 Tax=Flavobacteria ba...   251   4e-65 
UniRef100_B0P079 Pseudouridine synthase n=1 Tax=Clostridium sp. ...   251   4e-65 
UniRef100_B7BZ57 Pseudouridine synthase (Fragment) n=1 Tax=Roseb...   251   6e-65 
UniRef100_C0FD09 Putative uncharacterized protein n=1 Tax=Clostr...   249   2e-64 
UniRef100_A3XJS4 Pseudouridine synthase n=1 Tax=Leeuwenhoekiella...   248   4e-64 
UniRef100_A8RIE7 Pseudouridine synthase n=1 Tax=Clostridium bolt...   247   1e-63 
UniRef100_A7VIL1 Pseudouridine synthase n=1 Tax=Clostridium sp. ...   246   1e-63 
UniRef100_B7AQD5 Pseudouridine synthase n=1 Tax=Bacteroides pect...   243   1e-62 
UniRef100_B0MAK4 Pseudouridine synthase n=1 Tax=Anaerostipes cac...   242   3e-62 
UniRef100_Q1VWK8 Pseudouridine synthase n=1 Tax=Psychroflexus to...   241   4e-62 
UniRef100_Q3BRB0 Pseudouridine synthase n=1 Tax=Xanthomonas camp...   241   6e-62 
UniRef100_Q8PIT4 Pseudouridine synthase n=1 Tax=Xanthomonas axon...   238   4e-61 
UniRef100_B0RQY6 Pseudouridine synthase n=1 Tax=Xanthomonas camp...   238   4e-61 
UniRef100_UPI0001692AEE pseudouridylate synthase n=1 Tax=Xanthom...   238   5e-61 
UniRef100_B9G0G0 Putative uncharacterized protein n=1 Tax=Oryza ...   238   6e-61 
UniRef100_Q2P5I2 Pseudouridine synthase n=1 Tax=Xanthomonas oryz...   237   8e-61 
UniRef100_Q4UWM8 Pseudouridine synthase n=2 Tax=Xanthomonas camp...   236   1e-60 
UniRef100_B2SSI3 Pseudouridine synthase n=2 Tax=Xanthomonas oryz...   236   2e-60 
UniRef100_A5ZYR1 Pseudouridine synthase n=1 Tax=Ruminococcus obe...   236   2e-60 
UniRef100_B4SPP6 Pseudouridine synthase n=1 Tax=Stenotrophomonas...   235   3e-60 
UniRef100_C2RE30 RNA pseudouridine synthase n=1 Tax=Bacillus cer...   235   3e-60 
UniRef100_B2FHK9 Pseudouridine synthase n=2 Tax=Stenotrophomonas...   235   3e-60 
UniRef100_UPI0001979D27 pseudouridine synthase n=1 Tax=Clostridi...   235   4e-60 
UniRef100_Q633P3 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   234   5e-60 
UniRef100_C2ZDL0 RNA pseudouridine synthase n=2 Tax=Bacillus cer...   234   7e-60 
UniRef100_A8SZ92 Pseudouridine synthase n=1 Tax=Coprococcus euta...   234   9e-60 
UniRef100_C3ERE6 RNA pseudouridine synthase n=1 Tax=Bacillus thu...   233   1e-59 
UniRef100_Q72ZJ4 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   233   2e-59 
UniRef100_B5UNA1 Pseudouridine synthase n=5 Tax=Bacillus cereus ...   233   2e-59 
UniRef100_C1ETY9 RNA pseudouridine synthase family protein n=4 T...   233   2e-59 
UniRef100_B7JR56 Pseudouridine synthase n=5 Tax=Bacillus cereus ...   233   2e-59 
UniRef100_C3DR30 RNA pseudouridine synthase n=1 Tax=Bacillus thu...   233   2e-59 
UniRef100_C2VZT0 RNA pseudouridine synthase n=1 Tax=Bacillus cer...   233   2e-59 
UniRef100_C3F7W0 RNA pseudouridine synthase n=1 Tax=Bacillus thu...   232   3e-59 
UniRef100_B3ZG68 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   232   3e-59 
UniRef100_B7IJV0 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   231   6e-59 
UniRef100_B7HF66 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   231   8e-59 
UniRef100_C3IQ51 RNA pseudouridine synthase n=1 Tax=Bacillus thu...   231   8e-59 
UniRef100_C2U387 RNA pseudouridine synthase n=2 Tax=Bacillus cer...   230   1e-58 
UniRef100_C3G9G4 RNA pseudouridine synthase n=2 Tax=Bacillus thu...   230   1e-58 
UniRef100_C3CPY2 RNA pseudouridine synthase n=3 Tax=Bacillus thu...   230   1e-58 
UniRef100_C3L807 RNA pseudouridine synthase family protein n=8 T...   230   1e-58 
UniRef100_C2WCU6 RNA pseudouridine synthase n=1 Tax=Bacillus cer...   229   2e-58 
UniRef100_C2V1J3 RNA pseudouridine synthase n=1 Tax=Bacillus cer...   229   2e-58 
UniRef100_C2MRK3 RNA pseudouridine synthase n=1 Tax=Bacillus cer...   229   2e-58 
UniRef100_C3ABM2 RNA pseudouridine synthase n=1 Tax=Bacillus myc...   229   2e-58 
UniRef100_Q812Q1 Pseudouridine synthase n=4 Tax=Bacillus cereus ...   229   2e-58 
UniRef100_C2QI22 RNA pseudouridine synthase n=1 Tax=Bacillus cer...   229   2e-58 
UniRef100_C3C8R3 RNA pseudouridine synthase n=1 Tax=Bacillus thu...   229   3e-58 
UniRef100_C2YXR7 RNA pseudouridine synthase n=1 Tax=Bacillus cer...   229   3e-58 
UniRef100_B7HRJ2 Pseudouridine synthase n=4 Tax=Bacillus cereus ...   229   3e-58 
UniRef100_A7GTJ9 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   228   4e-58 
UniRef100_C3H728 RNA pseudouridine synthase n=1 Tax=Bacillus thu...   228   4e-58 
UniRef100_C2Q1M6 RNA pseudouridine synthase n=1 Tax=Bacillus cer...   228   7e-58 
UniRef100_C3I6Y5 RNA pseudouridine synthase n=1 Tax=Bacillus thu...   227   1e-57 
UniRef100_B0QMF1 Pseudouridine synthase n=2 Tax=Bacillus anthrac...   227   1e-57 
UniRef100_Q0TRZ3 Pseudouridine synthase n=2 Tax=Clostridium perf...   226   1e-57 
UniRef100_UPI0000E116F5 RNA pseudouridine synthase family protei...   226   2e-57 
UniRef100_B1BTN2 Pseudouridine synthase n=1 Tax=Clostridium perf...   226   2e-57 
UniRef100_B1BJC1 Pseudouridine synthase n=1 Tax=Clostridium perf...   226   2e-57 
UniRef100_B0NJR1 Pseudouridine synthase n=1 Tax=Clostridium scin...   226   2e-57 
UniRef100_C2SR05 RNA pseudouridine synthase n=1 Tax=Bacillus cer...   226   2e-57 
UniRef100_A9VJL1 Pseudouridine synthase n=1 Tax=Bacillus weihens...   225   3e-57 
UniRef100_Q0SU97 Pseudouridine synthase n=1 Tax=Clostridium perf...   225   4e-57 
UniRef100_B1RCJ0 Pseudouridine synthase n=2 Tax=Clostridium perf...   224   7e-57 
UniRef100_C3E9C7 RNA pseudouridine synthase n=1 Tax=Bacillus thu...   223   1e-56 
UniRef100_C1I2L4 RNA pseudouridine synthase n=1 Tax=Clostridium ...   223   2e-56 
UniRef100_B1RM89 Pseudouridine synthase n=1 Tax=Clostridium perf...   222   4e-56 
UniRef100_UPI000196C1EB hypothetical protein BRYFOR_02082 n=1 Ta...   221   5e-56 
UniRef100_A6BKF5 Pseudouridine synthase n=1 Tax=Dorea longicaten...   221   5e-56 
UniRef100_B2V5D1 Pseudouridine synthase n=1 Tax=Clostridium botu...   220   1e-55 
UniRef100_A0PYR9 Pseudouridine synthase n=1 Tax=Clostridium novy...   219   2e-55 
UniRef100_C0BZU4 Putative uncharacterized protein n=1 Tax=Clostr...   216   2e-54 
UniRef100_B2TN93 Pseudouridine synthase n=1 Tax=Clostridium botu...   216   3e-54 
UniRef100_A9NFY3 Pseudouridine synthase n=1 Tax=Acholeplasma lai...   213   2e-53 
UniRef100_B0G240 Pseudouridine synthase n=1 Tax=Dorea formicigen...   210   1e-52 
UniRef100_A5KIP2 Pseudouridine synthase n=1 Tax=Ruminococcus tor...   209   2e-52 
UniRef100_C2Y019 RNA pseudouridine synthase n=1 Tax=Bacillus cer...   208   5e-52 
UniRef100_C3ARE6 RNA pseudouridine synthase n=2 Tax=Bacillus myc...   206   2e-51 
UniRef100_C3BQR1 RNA pseudouridine synthase n=1 Tax=Bacillus pse...   202   2e-50 
UniRef100_C0D9T3 Putative uncharacterized protein n=1 Tax=Clostr...   202   2e-50 
UniRef100_C2L1C4 RluF protein n=1 Tax=Oribacterium sinus F0268 R...   201   9e-50 
UniRef100_C2QZ40 RNA pseudouridine synthase n=1 Tax=Bacillus cer...   198   4e-49 
UniRef100_C2YGA1 RNA pseudouridine synthase n=1 Tax=Bacillus cer...   197   9e-49 
UniRef100_Q3EPP5 Pseudouridine synthase n=1 Tax=Bacillus thuring...   191   7e-47 
UniRef100_Q31H34 Pseudouridine synthase n=1 Tax=Thiomicrospira c...   190   1e-46 
UniRef100_A6LUE3 Pseudouridine synthase n=1 Tax=Clostridium beij...   177   1e-42 
UniRef100_A4CE60 Pseudouridine synthase n=1 Tax=Pseudoalteromona...   172   3e-41 
UniRef100_C0QEH6 RluB n=1 Tax=Desulfobacterium autotrophicum HRM...   172   4e-41 
UniRef100_B1QTK1 Ribosomal large subunit pseudouridine synthase ...   170   1e-40 
UniRef100_A0Y0F7 Pseudouridine synthase n=1 Tax=Alteromonadales ...   169   3e-40 
UniRef100_A8SLU4 Pseudouridine synthase n=1 Tax=Parvimonas micra...   167   1e-39 
UniRef100_B8FA23 Pseudouridine synthase n=1 Tax=Desulfatibacillu...   166   2e-39 
UniRef100_C1U144 Pseudouridine synthase family protein n=1 Tax=D...   165   4e-39 
UniRef100_B0MS09 Pseudouridine synthase n=1 Tax=Eubacterium sira...   165   4e-39 
UniRef100_Q3IDR5 Pseudouridine synthase n=1 Tax=Pseudoalteromona...   163   2e-38 
UniRef100_B4S500 Pseudouridine synthase n=1 Tax=Prosthecochloris...   162   4e-38 
UniRef100_A8ZRV1 Pseudouridine synthase n=1 Tax=Desulfococcus ol...   159   3e-37 
UniRef100_Q11U12 Pseudouridine synthase n=1 Tax=Cytophaga hutchi...   158   5e-37 
UniRef100_Q12RF1 Pseudouridine synthase n=1 Tax=Shewanella denit...   158   6e-37 
UniRef100_C1SS44 Pseudouridine synthase family protein n=1 Tax=D...   156   2e-36 
UniRef100_B0PFV4 Pseudouridine synthase n=1 Tax=Anaerotruncus co...   155   3e-36 
UniRef100_A6WRZ9 Pseudouridine synthase n=1 Tax=Shewanella balti...   155   4e-36 
UniRef100_Q11YT0 Pseudouridine synthase n=1 Tax=Cytophaga hutchi...   155   5e-36 
UniRef100_C3WSE7 Ribosomal large subunit pseudouridine synthase ...   154   1e-35 
UniRef100_C3WUG3 Ribosomal large subunit pseudouridine synthase ...   153   2e-35 
UniRef100_C1X8M1 Pseudouridine synthase family protein n=1 Tax=L...   153   2e-35 
UniRef100_Q8RFE9 Pseudouridine synthase n=1 Tax=Fusobacterium nu...   152   3e-35 
UniRef100_B3EM63 Pseudouridine synthase n=1 Tax=Chlorobium phaeo...   152   3e-35 
UniRef100_B8EC68 Pseudouridine synthase n=1 Tax=Shewanella balti...   152   5e-35 
UniRef100_C2LPU4 Ribosomal large subunit pseudouridine synthase ...   152   5e-35 
UniRef100_A7T6N3 Predicted protein n=1 Tax=Nematostella vectensi...   152   5e-35 
UniRef100_Q0HY54 Pseudouridine synthase n=1 Tax=Shewanella sp. M...   150   1e-34 
UniRef100_C0YKR1 Ribosomal large subunit pseudouridine synthase ...   150   1e-34 
UniRef100_Q7P698 Pseudouridine synthase n=1 Tax=Fusobacterium nu...   150   1e-34 
UniRef100_UPI000185CAA9 ribosomal large subunit pseudouridine sy...   150   2e-34 
UniRef100_A0KTN2 Pseudouridine synthase n=1 Tax=Shewanella sp. A...   150   2e-34 
UniRef100_C3WJ05 Ribosomal large subunit pseudouridine synthase ...   150   2e-34 
UniRef100_C1QJ76 Ribosomal large subunit pseudouridine synthase ...   150   2e-34 
UniRef100_B0MSS4 Pseudouridine synthase n=1 Tax=Alistipes putred...   150   2e-34 
UniRef100_A5TWE7 Pseudouridine synthase n=1 Tax=Fusobacterium nu...   150   2e-34 
UniRef100_A1ZI67 Pseudouridine synthase n=1 Tax=Microscilla mari...   150   2e-34 
UniRef100_A9L0W3 Pseudouridine synthase n=1 Tax=Shewanella balti...   149   2e-34 
UniRef100_A4BW35 Pseudouridine synthase n=1 Tax=Polaribacter irg...   149   2e-34 
UniRef100_C1N350 Predicted protein (Fragment) n=1 Tax=Micromonas...   149   2e-34 
UniRef100_Q03MF4 Pseudouridine synthase n=3 Tax=Streptococcus th...   149   3e-34 
UniRef100_A3D114 Pseudouridine synthase n=1 Tax=Shewanella balti...   149   3e-34 
UniRef100_Q8XLG1 Pseudouridine synthase n=1 Tax=Clostridium perf...   148   7e-34 
UniRef100_Q0STT8 Pseudouridine synthase n=1 Tax=Clostridium perf...   148   7e-34 
UniRef100_A2U3Y8 Pseudouridine synthase n=1 Tax=Polaribacter sp....   148   7e-34 
UniRef100_C3WCR4 Ribosomal large subunit pseudouridine synthase ...   147   9e-34 
UniRef100_C3JBA6 Ribosomal large subunit pseudouridine synthase ...   147   1e-33 
UniRef100_C0DS19 Putative uncharacterized protein n=1 Tax=Eikene...   147   1e-33 
UniRef100_B7R7M2 Pseudouridine synthase n=2 Tax=Thermoanaerobact...   147   1e-33 
UniRef100_B1RJS2 Pseudouridine synthase n=2 Tax=Clostridium perf...   147   1e-33 
UniRef100_Q0TRF8 Pseudouridine synthase n=3 Tax=Clostridium perf...   147   1e-33 
UniRef100_A9D0A0 Putative ribosomal RNA pseudouridylate synthase...   147   1e-33 
UniRef100_B1RT56 Pseudouridine synthase n=1 Tax=Clostridium perf...   147   1e-33 
UniRef100_A5I2T5 Pseudouridine synthase n=2 Tax=Clostridium botu...   146   2e-33 
UniRef100_Q01SF5 Pseudouridine synthase n=1 Tax=Solibacter usita...   146   2e-33 
UniRef100_B1KSB6 Pseudouridine synthase n=1 Tax=Clostridium botu...   146   2e-33 
UniRef100_B1IM81 Pseudouridine synthase n=1 Tax=Clostridium botu...   146   2e-33 
UniRef100_A7GE58 Pseudouridine synthase n=1 Tax=Clostridium botu...   146   2e-33 
UniRef100_B3ERJ4 Pseudouridine synthase n=1 Tax=Candidatus Amoeb...   145   3e-33 
UniRef100_B1SH71 Pseudouridine synthase n=1 Tax=Streptococcus in...   145   3e-33 
UniRef100_A7VPG4 Pseudouridine synthase n=1 Tax=Clostridium lept...   145   3e-33 
UniRef100_Q7UUP0 Pseudouridine synthase n=1 Tax=Pirellula sp. Re...   145   4e-33 
UniRef100_B8CTF3 Pseudouridine synthase n=1 Tax=Shewanella piezo...   145   4e-33 
UniRef100_A4VX26 Pseudouridine synthase n=2 Tax=Streptococcus su...   145   4e-33 
UniRef100_Q0YTP3 Pseudouridine synthase n=1 Tax=Chlorobium ferro...   145   4e-33 
UniRef100_C3KX48 Ribosomal large subunit pseudouridine synthase ...   145   4e-33 
UniRef100_C1FNV2 Ribosomal large subunit pseudouridine synthase ...   145   4e-33 
UniRef100_A4CJ52 Pseudouridine synthase n=1 Tax=Robiginitalea bi...   145   4e-33 
UniRef100_A1RN24 Pseudouridine synthase n=2 Tax=Shewanella RepID...   145   4e-33 
UniRef100_B1KFF6 Pseudouridine synthase n=1 Tax=Shewanella woody...   145   6e-33 
UniRef100_A8G0B7 Pseudouridine synthase n=1 Tax=Shewanella sedim...   145   6e-33 
UniRef100_C1ZS79 Pseudouridine synthase family protein n=1 Tax=R...   145   6e-33 
UniRef100_Q3CZC8 Pseudouridine synthase n=6 Tax=Streptococcus ag...   144   7e-33 
UniRef100_B6FZT7 Pseudouridine synthase n=1 Tax=Clostridium hira...   144   7e-33 
UniRef100_Q8DSR0 Pseudouridine synthase n=1 Tax=Streptococcus mu...   144   9e-33 
UniRef100_B0TSY3 Pseudouridine synthase n=1 Tax=Shewanella halif...   144   9e-33 
UniRef100_B0K170 Pseudouridine synthase n=2 Tax=Thermoanaerobact...   144   9e-33 
UniRef100_C0DPD5 Putative uncharacterized protein n=1 Tax=Neisse...   144   9e-33 
UniRef100_Q0HLS0 Pseudouridine synthase n=1 Tax=Shewanella sp. M...   144   1e-32 
UniRef100_C0W9S9 Pseudouridine synthase n=1 Tax=Acidaminococcus ...   144   1e-32 
UniRef100_B9WY76 Pseudouridine synthase n=1 Tax=Streptococcus su...   144   1e-32 
UniRef100_A8AYT6 Pseudouridine synthase n=1 Tax=Streptococcus go...   143   2e-32 
UniRef100_Q3DJW4 Pseudouridine synthase n=1 Tax=Streptococcus ag...   143   2e-32 
UniRef100_C1I6Q6 Pseudouridine synthase n=1 Tax=Clostridium sp. ...   143   2e-32 
UniRef100_B9Z571 RNA-binding S4 domain protein n=1 Tax=Lutiella ...   143   2e-32 
UniRef100_Q8E3W2 Pseudouridine synthase n=1 Tax=Streptococcus ag...   143   2e-32 
UniRef100_Q895F7 Pseudouridine synthase n=1 Tax=Clostridium teta...   143   2e-32 
UniRef100_A8H0B5 Pseudouridine synthase n=1 Tax=Shewanella peale...   143   2e-32 
UniRef100_A2RG90 Pseudouridine synthase n=1 Tax=Streptococcus py...   143   2e-32 
UniRef100_Q1J8A7 Pseudouridine synthase n=6 Tax=Streptococcus py...   142   3e-32 
UniRef100_C0QWY7 Pseudouridylate synthase n=1 Tax=Brachyspira hy...   142   3e-32 
UniRef100_B9DTS6 Pseudouridine synthase n=1 Tax=Streptococcus ub...   142   3e-32 
UniRef100_A5IXL5 Pseudouridine synthase n=1 Tax=Mycoplasma agala...   142   3e-32 
UniRef100_A4Y3W8 Pseudouridine synthase n=1 Tax=Shewanella putre...   142   3e-32 
UniRef100_A3CPQ5 Pseudouridine synthase n=1 Tax=Streptococcus sa...   142   3e-32 
UniRef100_Q490N9 Pseudouridine synthase n=2 Tax=Streptococcus py...   142   3e-32 
UniRef100_C0UTW6 Pseudouridine synthase family protein n=1 Tax=T...   142   3e-32 
UniRef100_Q8KF53 Pseudouridine synthase n=1 Tax=Chlorobaculum te...   142   4e-32 
UniRef100_B4U4Q4 Pseudouridine synthase n=1 Tax=Streptococcus eq...   142   4e-32 
UniRef100_C2M2F6 Ribosomal large subunit pseudouridine synthase ...   142   4e-32 
UniRef100_C1Z6Q1 Pseudouridine synthase family protein n=1 Tax=P...   142   4e-32 
UniRef100_UPI0001794CA6 hypothetical protein CLOSPO_03189 n=1 Ta...   142   5e-32 
UniRef100_B2V0M9 Pseudouridine synthase n=1 Tax=Clostridium botu...   142   5e-32 
UniRef100_Q9K020 Putative uncharacterized protein n=1 Tax=Neisse...   141   6e-32 
UniRef100_Q5XDP2 Pseudouridine synthase n=1 Tax=Streptococcus py...   141   6e-32 
UniRef100_Q0C148 Ribosomal large subunit pseudouridine synthase ...   141   6e-32 
UniRef100_B8G2X0 Pseudouridine synthase n=1 Tax=Chloroflexus agg...   141   6e-32 
UniRef100_B8CW11 Pseudouridine synthase n=1 Tax=Halothermothrix ...   141   6e-32 
UniRef100_B4SCY9 Pseudouridine synthase n=1 Tax=Pelodictyon phae...   141   6e-32 
UniRef100_A9M3N8 RNA-binding protein n=1 Tax=Neisseria meningiti...   141   6e-32 
UniRef100_A7NF12 Pseudouridine synthase n=1 Tax=Roseiflexus cast...   141   6e-32 
UniRef100_A5V220 Pseudouridine synthase n=1 Tax=Roseiflexus sp. ...   141   6e-32 
UniRef100_A1KT63 Putative RNA-binding protein n=2 Tax=Neisseria ...   141   6e-32 
UniRef100_B4RK89 RNA-binding protein n=3 Tax=Neisseria gonorrhoe...   141   6e-32 
UniRef100_B0N6F1 Pseudouridine synthase n=2 Tax=Bacteria RepID=B...   141   8e-32 
UniRef100_B3QY10 Pseudouridine synthase n=1 Tax=Chloroherpeton t...   140   1e-31 
UniRef100_C0M7Q3 Ribosomal large subunit pseudouridine synthase ...   140   1e-31 
UniRef100_A4J3M3 Pseudouridine synthase n=1 Tax=Desulfotomaculum...   140   1e-31 
UniRef100_Q65HX7 Pseudouridine synthase n=2 Tax=Bacteria RepID=Q...   140   2e-31 
UniRef100_Q4A8J9 Pseudouridine synthase n=2 Tax=Mycoplasma hyopn...   140   2e-31 
UniRef100_B2TKZ1 Pseudouridine synthase n=1 Tax=Clostridium botu...   140   2e-31 
UniRef100_B2DKA2 Pseudouridine synthase n=1 Tax=Streptococcus pn...   140   2e-31 
UniRef100_A6EJI4 Pseudouridine synthase n=1 Tax=Pedobacter sp. B...   140   2e-31 
UniRef100_C1C9E0 Ribosomal large subunit pseudouridine synthase ...   140   2e-31 
UniRef100_Q0AX41 Pseudouridine synthase n=1 Tax=Syntrophomonas w...   139   2e-31 
UniRef100_A9WIX6 Pseudouridine synthase n=2 Tax=Chloroflexus Rep...   139   2e-31 
UniRef100_A3QHU8 Pseudouridine synthase n=1 Tax=Shewanella loihi...   139   2e-31 
UniRef100_Q1JVP4 Pseudouridine synthase n=1 Tax=Desulfuromonas a...   139   2e-31 
UniRef100_B7WS64 RNA-binding S4 domain protein n=1 Tax=Comamonas...   139   2e-31 
UniRef100_A7V624 Pseudouridine synthase n=1 Tax=Bacteroides unif...   139   2e-31 
UniRef100_UPI0000585587 ribosomal large subunit pseudouridine sy...   139   3e-31 
UniRef100_Q4AAG8 Pseudouridine synthase n=1 Tax=Mycoplasma hyopn...   139   3e-31 
UniRef100_Q1WTK6 Pseudouridine synthase n=1 Tax=Lactobacillus sa...   139   3e-31 
UniRef100_B0S1L0 Pseudouridine synthase n=1 Tax=Finegoldia magna...   139   3e-31 
UniRef100_C2EFL2 Ribosomal large subunit pseudouridine synthase ...   139   3e-31 
UniRef100_C1QCY0 Pseudouridine synthase family protein n=1 Tax=B...   139   3e-31 
UniRef100_Q7NVD7 Probable pseudouridylate synthase n=1 Tax=Chrom...   139   4e-31 
UniRef100_Q6MLP0 Pseudouridylate synthase n=1 Tax=Bdellovibrio b...   139   4e-31 
UniRef100_B2A4P2 Pseudouridine synthase n=1 Tax=Natranaerobius t...   139   4e-31 
UniRef100_C0DE32 Putative uncharacterized protein n=1 Tax=Neisse...   139   4e-31 
UniRef100_B9E6N1 Pseudouridine synthase n=1 Tax=Macrococcus case...   139   4e-31 
UniRef100_B7Y7Y5 Pseudouridine synthase n=3 Tax=Geobacillus RepI...   139   4e-31 
UniRef100_UPI000057C09E ribosomal large subunit pseudouridine sy...   138   5e-31 
UniRef100_Q74JM1 Pseudouridine synthase n=1 Tax=Lactobacillus jo...   138   5e-31 
UniRef100_Q64P23 Pseudouridine synthase n=1 Tax=Bacteroides frag...   138   5e-31 
UniRef100_Q5L8W1 Pseudouridine synthase n=1 Tax=Bacteroides frag...   138   5e-31 
UniRef100_Q043U5 Pseudouridine synthase n=2 Tax=Lactobacillus ga...   138   5e-31 
UniRef100_A7GN10 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   138   5e-31 
UniRef100_C2E5Q6 Pseudouridylate synthase n=1 Tax=Lactobacillus ...   138   5e-31 
UniRef100_C0EFL9 Putative uncharacterized protein n=1 Tax=Clostr...   138   5e-31 
UniRef100_B6W7S5 Pseudouridine synthase n=1 Tax=Anaerococcus hyd...   138   5e-31 
UniRef100_B4D966 Pseudouridine synthase n=1 Tax=Chthoniobacter f...   138   5e-31 
UniRef100_B1R1E9 Pseudouridine synthase n=1 Tax=Clostridium buty...   138   5e-31 
UniRef100_A1HTX2 Pseudouridine synthase n=1 Tax=Thermosinus carb...   138   5e-31 
UniRef100_UPI0001A45311 hypothetical protein NEISUBOT_00978 n=1 ...   138   7e-31 
UniRef100_C0GDY1 Pseudouridine synthase n=1 Tax=Dethiobacter alk...   138   7e-31 
UniRef100_A3DD99 Pseudouridine synthase n=2 Tax=Clostridium ther...   138   7e-31 
UniRef100_B1YMA5 Pseudouridine synthase n=1 Tax=Exiguobacterium ...   137   9e-31 
UniRef100_C3AJK6 Pseudouridine synthase n=3 Tax=Bacillus RepID=C...   137   9e-31 
UniRef100_C2AWN4 Ribosomal large subunit pseudouridine synthase ...   137   9e-31 
UniRef100_C1CMI4 Ribosomal large subunit pseudouridine synthase ...   137   9e-31 
UniRef100_C0F3M0 Putative uncharacterized protein n=1 Tax=Neisse...   137   9e-31 
UniRef100_B6WD62 Pseudouridine synthase n=1 Tax=Bacteroides fine...   137   9e-31 
UniRef100_B5JLJ9 Pseudouridine synthase n=1 Tax=Verrucomicrobiae...   137   9e-31 
UniRef100_B2RK43 Pseudouridine synthase n=1 Tax=Porphyromonas gi...   137   1e-30 
UniRef100_A6L0U4 Pseudouridine synthase n=1 Tax=Bacteroides vulg...   137   1e-30 
UniRef100_C3RG11 Ribosomal large subunit pseudouridine synthase ...   137   1e-30 
UniRef100_C3Q772 Ribosomal large subunit pseudouridine synthase ...   137   1e-30 
UniRef100_C2G5N7 Pseudouridylate synthase (Ribosomal large subun...   137   1e-30 
UniRef100_B6VSK0 Pseudouridine synthase n=1 Tax=Bacteroides dore...   137   1e-30 
UniRef100_B4BL72 Pseudouridine synthase n=1 Tax=Geobacillus sp. ...   137   1e-30 
UniRef100_A4S8U3 Predicted protein (Fragment) n=1 Tax=Ostreococc...   137   1e-30 
UniRef100_Q8A0Z9 Pseudouridine synthase n=1 Tax=Bacteroides thet...   137   2e-30 
UniRef100_Q5P2N8 Propable 16S pseudouridylate synthase n=1 Tax=A...   137   2e-30 
UniRef100_B5D3Y4 Pseudouridine synthase n=1 Tax=Bacteroides pleb...   137   2e-30 
UniRef100_B1C3G7 Pseudouridine synthase n=1 Tax=Clostridium spir...   137   2e-30 
UniRef100_C3QZ67 Ribosomal large subunit pseudouridine synthase ...   136   2e-30 
UniRef100_B1SMT5 Pseudouridine synthase n=1 Tax=Geobacillus sp. ...   136   2e-30 
UniRef100_A5ZKF6 Pseudouridine synthase n=1 Tax=Bacteroides cacc...   136   2e-30 
UniRef100_Q74DB4 Pseudouridine synthase n=1 Tax=Geobacter sulfur...   136   3e-30 
UniRef100_Q2YCF0 Ribosomal large subunit pseudouridine synthase ...   136   3e-30 
UniRef100_A9BB23 Pseudouridine synthase n=1 Tax=Prochlorococcus ...   136   3e-30 
UniRef100_C2W5Z0 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   136   3e-30 
UniRef100_C2TUX1 Pseudouridine synthase n=4 Tax=Bacillus cereus ...   136   3e-30 
UniRef100_C0EN02 Putative uncharacterized protein n=1 Tax=Neisse...   136   3e-30 
UniRef100_B3JJX8 Pseudouridine synthase n=1 Tax=Bacteroides copr...   136   3e-30 
UniRef100_B7GKJ8 Pseudouridine synthase n=1 Tax=Anoxybacillus fl...   135   3e-30 
UniRef100_B0KRW9 Pseudouridine synthase n=1 Tax=Pseudomonas puti...   135   3e-30 
UniRef100_A6TRH4 Pseudouridine synthase n=1 Tax=Alkaliphilus met...   135   3e-30 
UniRef100_A6GWF5 Pseudouridylate synthase n=1 Tax=Flavobacterium...   135   3e-30 
UniRef100_A5W0B4 Pseudouridine synthase n=1 Tax=Pseudomonas puti...   135   3e-30 
UniRef100_A4IQF6 Pseudouridine synthase n=1 Tax=Geobacillus ther...   135   3e-30 
UniRef100_Q1N5M1 Pseudouridine synthase n=1 Tax=Bermanella maris...   135   3e-30 
UniRef100_C1DTU8 Ribosomal large subunit pseudouridine synthase ...   135   3e-30 
UniRef100_Q3SLL9 Pseudouridine synthase, Rsu n=1 Tax=Thiobacillu...   135   4e-30 
UniRef100_B3QLK5 Pseudouridine synthase n=1 Tax=Chlorobaculum pa...   135   4e-30 
UniRef100_A0Q0L3 Pseudouridine synthase n=1 Tax=Clostridium novy...   135   4e-30 
UniRef100_C2Q9K8 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   135   4e-30 
UniRef100_C1RQZ7 Pseudouridine synthase family protein n=1 Tax=C...   135   4e-30 
UniRef100_C0XB95 Pseudouridylate synthase n=1 Tax=Lactobacillus ...   135   4e-30 
UniRef100_B1B9P1 Pseudouridine synthase n=1 Tax=Clostridium botu...   135   4e-30 
UniRef100_A8SFK4 Pseudouridine synthase n=1 Tax=Faecalibacterium...   135   4e-30 
UniRef100_A3HY40 Pseudouridine synthase n=1 Tax=Algoriphagus sp....   135   4e-30 
UniRef100_B3EFR7 Pseudouridine synthase n=1 Tax=Chlorobium limic...   135   6e-30 
UniRef100_C1EMW9 Ribosomal large subunit pseudouridine synthase ...   135   6e-30 
UniRef100_B3U4L2 Pseudouridine synthase n=1 Tax=Candidatus Nitro...   135   6e-30 
UniRef100_C3L9I6 Ribosomal large subunit pseudouridine synthase ...   135   6e-30 
UniRef100_Q82Y80 Possible 16S pseudouridylate synthase n=1 Tax=N...   134   8e-30 
UniRef100_Q63DQ9 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   134   8e-30 
UniRef100_A1BDS4 Pseudouridine synthase n=1 Tax=Chlorobium phaeo...   134   8e-30 
UniRef100_C2MA52 Ribosomal large subunit pseudouridine synthase ...   134   8e-30 
UniRef100_C2HGK0 Pseudouridylate synthase n=1 Tax=Finegoldia mag...   134   8e-30 
UniRef100_C2CFD4 Pseudouridylate synthase n=1 Tax=Anaerococcus t...   134   8e-30 
UniRef100_C1UQV5 Pseudouridine synthase family protein n=1 Tax=H...   134   8e-30 
UniRef100_B7HKY1 Pseudouridine synthase n=9 Tax=Bacillus cereus ...   134   8e-30 
UniRef100_UPI0000166A14 COG1187: 16S rRNA uridine-516 pseudourid...   134   1e-29 
UniRef100_Q67NH5 Pseudouridine synthase n=1 Tax=Symbiobacterium ...   134   1e-29 
UniRef100_Q4L6J3 Pseudouridine synthase n=1 Tax=Staphylococcus h...   134   1e-29 
UniRef100_A6LUN0 Pseudouridine synthase n=1 Tax=Clostridium beij...   134   1e-29 
UniRef100_A5FK52 Ribosomal large subunit pseudouridine synthase ...   134   1e-29 
UniRef100_B2QF00 Pseudouridine synthase n=1 Tax=Exiguobacterium ...   134   1e-29 
UniRef100_Q7U7N2 Pseudouridine synthase n=1 Tax=Synechococcus sp...   134   1e-29 
UniRef100_Q49XU1 Pseudouridine synthase n=1 Tax=Staphylococcus s...   134   1e-29 
UniRef100_Q3B289 Pseudouridine synthase n=1 Tax=Pelodictyon lute...   134   1e-29 
UniRef100_Q3AT60 Pseudouridine synthase n=1 Tax=Chlorobium chlor...   134   1e-29 
UniRef100_B8I2V1 Pseudouridine synthase n=1 Tax=Clostridium cell...   134   1e-29 
UniRef100_B5YJH7 Pseudouridine synthase n=1 Tax=Thermodesulfovib...   134   1e-29 
UniRef100_A4JF79 RNA-binding S4 domain protein n=1 Tax=Burkholde...   134   1e-29 
UniRef100_B4WEA4 Pseudouridine synthase n=1 Tax=Brevundimonas sp...   134   1e-29 
UniRef100_A8S8D3 Pseudouridine synthase n=1 Tax=Faecalibacterium...   134   1e-29 
UniRef100_UPI00019762A4 pseudouridine synthase n=2 Tax=Bacillus ...   133   2e-29 
UniRef100_B9DNU5 Pseudouridine synthase n=1 Tax=Staphylococcus c...   133   2e-29 
UniRef100_B7IP50 Pseudouridine synthase n=7 Tax=Bacillus cereus ...   133   2e-29 
UniRef100_C3A3M7 Pseudouridine synthase n=1 Tax=Bacillus mycoide...   133   2e-29 
UniRef100_C2XRK7 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   133   2e-29 
UniRef100_A9VLP0 Pseudouridine synthase n=2 Tax=Bacillus cereus ...   133   2e-29 
UniRef100_A5IT21 Pseudouridine synthase n=16 Tax=Staphylococcus ...   133   2e-29 
UniRef100_C1W7G7 Ribosomal large subunit pseudouridine synthase ...   133   2e-29 
UniRef100_C1PK56 Pseudouridine synthase family protein n=1 Tax=A...   133   2e-29 
UniRef100_C0CAT0 Putative uncharacterized protein n=1 Tax=Subdol...   133   2e-29 
UniRef100_B7ACB9 Pseudouridine synthase n=1 Tax=Bacteroides egge...   133   2e-29 
UniRef100_B1C6T1 Pseudouridine synthase n=1 Tax=Anaerofustis ste...   133   2e-29 
UniRef100_UPI0001A4B207 Pseudouridine synthase, Rsu n=1 Tax=Burk...   133   2e-29 
UniRef100_UPI000197B12F hypothetical protein BACCOPRO_01867 n=1 ...   133   2e-29 
UniRef100_B0BAH8 Pseudouridine synthase n=1 Tax=Chlamydia tracho...   133   2e-29 
UniRef100_C2PTK7 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   133   2e-29 
UniRef100_UPI0000E87E66 pseudouridine synthase, Rsu n=1 Tax=Meth...   132   3e-29 
UniRef100_Q5WGY9 Pseudouridine synthase n=1 Tax=Bacillus clausii...   132   3e-29 
UniRef100_B9KY92 Pseudouridine synthase n=1 Tax=Thermomicrobium ...   132   3e-29 
UniRef100_A7Z665 Pseudouridine synthase n=1 Tax=Bacillus amyloli...   132   3e-29 
UniRef100_C2BZ32 Pseudouridylate synthase n=1 Tax=Listeria grayi...   132   3e-29 
UniRef100_B0AC58 Pseudouridine synthase n=1 Tax=Clostridium bart...   132   3e-29 
UniRef100_Q087Y2 Pseudouridine synthase n=1 Tax=Shewanella frigi...   132   4e-29 
UniRef100_B0B8U9 Pseudouridine synthase n=1 Tax=Chlamydia tracho...   132   4e-29 
UniRef100_C1PEV6 Pseudouridine synthase n=1 Tax=Bacillus coagula...   132   4e-29 
UniRef100_B0NWC3 Pseudouridine synthase n=1 Tax=Bacteroides ster...   132   4e-29 
UniRef100_Q00TR3 Pseudouridine synthase family 1 protein (ISS) n...   132   4e-29 
UniRef100_B1WUK1 Pseudouridine synthase n=1 Tax=Cyanothece sp. A...   132   5e-29 
UniRef100_C1PZ06 Pseudouridine synthase family protein n=1 Tax=A...   132   5e-29 
UniRef100_A6CMZ0 Pseudouridine synthase n=1 Tax=Bacillus sp. SG-...   132   5e-29 
UniRef100_Q9WYA2 Pseudouridine synthase n=1 Tax=Thermotoga marit...   131   6e-29 
UniRef100_Q5HP57 Pseudouridine synthase n=2 Tax=Staphylococcus e...   131   6e-29 
UniRef100_Q2S2G3 Pseudouridine synthase n=1 Tax=Salinibacter rub...   131   6e-29 
UniRef100_Q188B7 Pseudouridine synthase n=1 Tax=Clostridium diff...   131   6e-29 
UniRef100_O84728 Pseudouridine synthase n=2 Tax=Chlamydia tracho...   131   6e-29 
UniRef100_B8E103 Pseudouridine synthase n=1 Tax=Dictyoglomus tur...   131   8e-29 
UniRef100_B1JCJ1 Pseudouridine synthase n=1 Tax=Pseudomonas puti...   131   8e-29 
UniRef100_C2PCJ1 Pseudouridine synthase n=2 Tax=Bacillus cereus ...   131   8e-29 
UniRef100_C2M0R3 Ribosomal large subunit pseudouridine synthase ...   131   8e-29 
UniRef100_P35159 Ribosomal large subunit pseudouridine synthase ...   131   8e-29 
UniRef100_Q0IBE3 Pseudouridine synthase n=1 Tax=Synechococcus sp...   130   1e-28 
UniRef100_C3QH58 Ribosomal large subunit pseudouridine synthase ...   130   1e-28 
UniRef100_C1WQV7 Ribosomal large subunit pseudouridine synthase ...   130   1e-28 
UniRef100_C1TG27 Ribosomal large subunit pseudouridine synthase ...   130   1e-28 
UniRef100_C0BLA3 RNA-binding S4 domain protein n=1 Tax=Flavobact...   130   1e-28 
UniRef100_UPI00006DC995 hypothetical protein CdifQ_04002358 n=1 ...   130   1e-28 
UniRef100_Q0BE12 Pseudouridine synthase, Rsu n=1 Tax=Burkholderi...   130   1e-28 
UniRef100_B1YS77 RNA-binding S4 domain protein n=1 Tax=Burkholde...   130   1e-28 
UniRef100_B1L9N9 Pseudouridine synthase n=1 Tax=Thermotoga sp. R...   130   1e-28 
UniRef100_A1AQQ8 Pseudouridine synthase n=1 Tax=Pelobacter propi...   130   1e-28 
UniRef100_Q4CA40 Pseudouridine synthase n=1 Tax=Crocosphaera wat...   130   1e-28 
UniRef100_C1T5V5 Pseudouridine synthase family protein n=1 Tax=D...   130   1e-28 
UniRef100_B1TER5 RNA-binding S4 domain protein n=1 Tax=Burkholde...   130   1e-28 
UniRef100_A8VXP0 Pseudouridine synthase n=1 Tax=Bacillus selenit...   130   1e-28 
UniRef100_Q688C2 Pseudouridine synthase n=1 Tax=Mycoplasma mobil...   130   2e-28 
UniRef100_B8DJK4 Pseudouridine synthase n=1 Tax=Desulfovibrio vu...   130   2e-28 
UniRef100_A4XKB0 Pseudouridine synthase n=1 Tax=Caldicellulosiru...   130   2e-28 
UniRef100_A1SJL6 Pseudouridine synthase n=1 Tax=Nocardioides sp....   130   2e-28 
UniRef100_A1K3P0 Pseudouridylate synthase n=1 Tax=Azoarcus sp. B...   130   2e-28 
UniRef100_C1XGS3 Ribosomal large subunit pseudouridine synthase ...   130   2e-28 
UniRef100_A5IKF7 Pseudouridine synthase n=2 Tax=Thermotogaceae R...   130   2e-28 
UniRef100_Q9KCJ5 Pseudouridine synthase n=1 Tax=Bacillus halodur...   129   2e-28 
UniRef100_Q8YQF8 Pseudouridine synthase n=1 Tax=Nostoc sp. PCC 7...   129   2e-28 
UniRef100_Q6MEW5 Pseudouridine synthase n=1 Tax=Candidatus Proto...   129   2e-28 
UniRef100_Q1MQ05 Pseudouridine synthase n=1 Tax=Lawsonia intrace...   129   2e-28 
UniRef100_A7HJ83 RNA-binding S4 domain protein n=1 Tax=Fervidoba...   129   2e-28 
UniRef100_B4AKE3 Pseudouridine synthase n=1 Tax=Bacillus pumilus...   129   2e-28 
UniRef100_B3C555 Pseudouridine synthase n=1 Tax=Bacteroides inte...   129   2e-28 
UniRef100_A7ADE1 Pseudouridine synthase n=1 Tax=Parabacteroides ...   129   2e-28 
UniRef100_UPI000196BAD7 hypothetical protein CATMIT_00510 n=1 Ta...   129   3e-28 
UniRef100_Q5SLS4 Pseudouridine synthase n=1 Tax=Thermus thermoph...   129   3e-28 
UniRef100_A4SG75 Pseudouridine synthase n=1 Tax=Chlorobium phaeo...   129   3e-28 
UniRef100_A0M7H0 Ribosomal large subunit pseudouridine synthase ...   129   3e-28 
UniRef100_B9YTR8 Pseudouridine synthase n=1 Tax='Nostoc azollae'...   129   3e-28 
UniRef100_UPI00016A9AF0 pseudouridine synthase family protein n=...   129   4e-28 
UniRef100_UPI00016A2F97 pseudouridine synthase family protein n=...   129   4e-28 
UniRef100_Q3MC44 Pseudouridine synthase n=1 Tax=Anabaena variabi...   129   4e-28 
UniRef100_Q0AK23 Ribosomal large subunit pseudouridine synthase ...   129   4e-28 
UniRef100_Q03WM9 Pseudouridine synthase n=1 Tax=Leuconostoc mese...   129   4e-28 
UniRef100_B0CDY3 Pseudouridine synthase n=1 Tax=Acaryochloris ma...   129   4e-28 
UniRef100_A1S9T3 Pseudouridine synthase n=1 Tax=Shewanella amazo...   129   4e-28 
UniRef100_C2BDN8 Pseudouridylate synthase n=1 Tax=Anaerococcus l...   129   4e-28 
UniRef100_Q12FX6 Ribosomal large subunit pseudouridine synthase ...   128   5e-28 
UniRef100_B8DBX7 Pseudouridine synthase n=1 Tax=Listeria monocyt...   128   5e-28 
UniRef100_B5XJY0 Putative ribosomal large subunit pseudouridine ...   128   5e-28 
UniRef100_A9BUB0 Pseudouridine synthase n=1 Tax=Delftia acidovor...   128   5e-28 
UniRef100_A9AIL1 RNA-binding S4 domain protein n=1 Tax=Burkholde...   128   5e-28 
UniRef100_A0AK61 Pseudouridine synthase n=1 Tax=Listeria welshim...   128   5e-28 
UniRef100_Q71Y65 Pseudouridine synthase n=5 Tax=Listeria monocyt...   128   5e-28 
UniRef100_B9C7K1 RNA pseudouridine synthase family protein n=1 T...   128   5e-28 
UniRef100_B9BY29 RNA pseudouridine synthase family protein n=1 T...   128   5e-28 
UniRef100_B9BFQ2 RNA pseudouridine synthase family protein n=1 T...   128   5e-28 
UniRef100_B3D1J8 Ribosomal large subunit pseudouridine synthase ...   128   5e-28 
UniRef100_A9DKR7 Pseudouridylate synthase (Ribosomal large subun...   128   5e-28 
UniRef100_A6NUQ3 Pseudouridine synthase n=1 Tax=Bacteroides capi...   128   5e-28 
UniRef100_UPI000187385F ribosomal large subunit pseudouridine sy...   128   7e-28 
UniRef100_Q8EQ87 Pseudouridine synthase n=1 Tax=Oceanobacillus i...   128   7e-28 
UniRef100_Q4KGA5 Pseudouridine synthase n=1 Tax=Pseudomonas fluo...   128   7e-28 
UniRef100_Q1I6X5 Pseudouridine synthase n=1 Tax=Pseudomonas ento...   128   7e-28 
UniRef100_Q02YR0 Pseudouridine synthase n=1 Tax=Lactococcus lact...   128   7e-28 
UniRef100_B9E1X9 Pseudouridine synthase n=2 Tax=Clostridium kluy...   128   7e-28 
UniRef100_B1GRJ9 Pseudouridine synthase n=1 Tax=Pseudomonas syri...   128   7e-28 
UniRef100_A6LIA0 Pseudouridine synthase n=1 Tax=Parabacteroides ...   128   7e-28 
UniRef100_A2RKH7 Pseudouridine synthase n=1 Tax=Lactococcus lact...   128   7e-28 
UniRef100_C1F236 Pseudouridine synthase rsuA family protein n=1 ...   128   7e-28 
UniRef100_A3IUY9 Pseudouridine synthase n=1 Tax=Cyanothece sp. C...   128   7e-28 
UniRef100_UPI0001A486EB RNA pseudouridine synthase family protei...   127   9e-28 
UniRef100_UPI00016B0AD3 RNA pseudouridine synthase family protei...   127   9e-28 
UniRef100_UPI00016AE1AC pseudouridine synthase family protein n=...   127   9e-28 
UniRef100_UPI00016ABF2D RNA pseudouridine synthase family protei...   127   9e-28 
UniRef100_UPI0000E6A540 RNA pseudouridine synthase family protei...   127   9e-28 
UniRef100_UPI000055903C COG1187: 16S rRNA uridine-516 pseudourid...   127   9e-28 
UniRef100_UPI000018F1BF pseudouridine synthase n=1 Tax=Lactococc...   127   9e-28 
UniRef100_Q9CG35 Pseudouridine synthase n=1 Tax=Lactococcus lact...   127   9e-28 
UniRef100_Q92A59 Pseudouridine synthase n=1 Tax=Listeria innocua...   127   9e-28 
UniRef100_Q7VBH8 Pseudouridine synthase n=1 Tax=Prochlorococcus ...   127   9e-28 
UniRef100_Q3JR25 Pseudouridine synthase family protein n=2 Tax=B...   127   9e-28 
UniRef100_Q1J0B9 Pseudouridine synthase n=1 Tax=Deinococcus geot...   127   9e-28 
UniRef100_A3NWN5 RNA pseudouridine synthase family protein n=1 T...   127   9e-28 
UniRef100_A3NAV1 RNA pseudouridine synthase family protein n=1 T...   127   9e-28 
UniRef100_A3MKU7 RNA pseudouridine synthase family protein n=1 T...   127   9e-28 
UniRef100_A1V573 RNA pseudouridine synthase family protein n=1 T...   127   9e-28 
UniRef100_C2E219 Pseudouridylate synthase n=1 Tax=Lactobacillus ...   127   9e-28 
UniRef100_B7CMV2 RNA pseudouridine synthase family protein n=1 T...   127   9e-28 
UniRef100_B6BUI4 Ribosomal large subunit pseudouridine synthase ...   127   9e-28 
UniRef100_B1HKB8 RNA pseudouridine synthase family protein n=1 T...   127   9e-28 
UniRef100_A2SB68 RNA pseudouridine synthase family protein n=3 T...   127   9e-28 
UniRef100_A4LCV3 RNA pseudouridine synthase family protein n=1 T...   127   9e-28 
UniRef100_UPI00016A5934 Pseudouridine synthase, Rsu n=1 Tax=Burk...   127   1e-27 
UniRef100_Q72GT1 Pseudouridine synthase n=1 Tax=Thermus thermoph...   127   1e-27 
UniRef100_B1ZYG8 Pseudouridine synthase n=1 Tax=Opitutus terrae ...   127   1e-27 
UniRef100_B9CS43 Pseudouridine synthase n=1 Tax=Staphylococcus c...   127   1e-27 
UniRef100_B8KIV6 Pseudouridine synthase n=1 Tax=gamma proteobact...   127   1e-27 
UniRef100_B7DQW7 Pseudouridine synthase n=1 Tax=Alicyclobacillus...   127   1e-27 
UniRef100_UPI0001A42EBF 16S rRNA uridine-516 pseudouridylate syn...   127   2e-27 
UniRef100_Q3AJ67 Pseudouridine synthase n=1 Tax=Synechococcus sp...   127   2e-27 
UniRef100_Q1GY93 Pseudouridine synthase, Rsu n=1 Tax=Methylobaci...   127   2e-27 
UniRef100_C1PTZ0 Ribosomal large subunit pseudouridine synthase ...   127   2e-27 
UniRef100_B7DI93 RNA-binding S4 domain protein n=1 Tax=Desulfovi...   127   2e-27 
UniRef100_B7JUR6 Pseudouridine synthase n=2 Tax=Cyanothece RepID...   127   2e-27 
UniRef100_A8RB88 Pseudouridine synthase n=1 Tax=Eubacterium doli...   127   2e-27 
UniRef100_A4AAQ8 Pseudouridine synthase n=1 Tax=Congregibacter l...   127   2e-27 
UniRef100_A3J2H6 Pseudouridylate synthase (Ribosomal large subun...   127   2e-27 
UniRef100_UPI00016A8EC0 pseudouridine synthase family protein n=...   126   2e-27 
UniRef100_UPI00016A5C8B pseudouridine synthase family protein n=...   126   2e-27 
UniRef100_Q7V6S7 Pseudouridine synthase n=1 Tax=Prochlorococcus ...   126   2e-27 
UniRef100_Q62JC1 Pseudouridine synthase family protein n=2 Tax=p...   126   2e-27 
UniRef100_Q2SX01 Pseudouridine synthase family protein n=1 Tax=B...   126   2e-27 
UniRef100_B3E7C4 Pseudouridine synthase n=1 Tax=Geobacter lovley...   126   2e-27 
UniRef100_B2V8S3 Pseudouridine synthase n=1 Tax=Sulfurihydrogeni...   126   2e-27 
UniRef100_B1I3X6 Pseudouridine synthase n=1 Tax=Candidatus Desul...   126   2e-27 
UniRef100_A8FEQ2 Pseudouridine synthase n=1 Tax=Bacillus pumilus...   126   2e-27 
UniRef100_A4XTD9 Pseudouridine synthase n=1 Tax=Pseudomonas mend...   126   2e-27 
UniRef100_A1TV43 RNA-binding S4 domain protein n=1 Tax=Acidovora...   126   2e-27 
UniRef100_UPI0001745DB4 ribosomal large subunit pseudouridine sy...   126   3e-27 
UniRef100_Q3AAS7 Pseudouridine synthase n=1 Tax=Carboxydothermus...   126   3e-27 
UniRef100_A2C8C2 Pseudouridine synthase n=1 Tax=Prochlorococcus ...   126   3e-27 
UniRef100_B9AJQ9 Pseudouridine synthase n=1 Tax=Prevotella copri...   126   3e-27 
UniRef100_A4AU27 Ribosomal large subunit pseudouridine synthase ...   126   3e-27 
UniRef100_Q4ZQF9 Pseudouridine synthase n=1 Tax=Pseudomonas syri...   125   3e-27 
UniRef100_Q48FZ9 Pseudouridine synthase n=1 Tax=Pseudomonas syri...   125   3e-27 
UniRef100_B5E8S7 Pseudouridine synthase n=1 Tax=Geobacter bemidj...   125   3e-27 
UniRef100_B2UB03 RNA-binding S4 domain protein n=1 Tax=Ralstonia...   125   3e-27 
UniRef100_B1MYB0 Pseudouridine synthase n=1 Tax=Leuconostoc citr...   125   3e-27 
UniRef100_B7YWD2 RNA-binding S4 domain protein n=1 Tax=Variovora...   125   3e-27 
UniRef100_B5WW21 RNA-binding S4 domain protein (Fragment) n=1 Ta...   125   3e-27 
UniRef100_A7CJR2 RNA-binding S4 domain protein n=1 Tax=Ralstonia...   125   3e-27 
UniRef100_O67444 Uncharacterized RNA pseudouridine synthase aq_1...   125   3e-27 
UniRef100_UPI0001978121 Pseudouridine synthase n=1 Tax=Lactobaci...   125   5e-27 
UniRef100_UPI00016C3D27 ribosomal large subunit pseudouridine sy...   125   5e-27 
UniRef100_UPI00016AD9B5 pseudouridine synthase family protein n=...   125   5e-27 
UniRef100_UPI0001693918 pseudouridylate synthase n=1 Tax=Paeniba...   125   5e-27 
UniRef100_Q13XB2 Pseudouridine synthase, Rsu n=1 Tax=Burkholderi...   125   5e-27 
UniRef100_B3WE72 Pseudouridine synthase n=1 Tax=Lactobacillus ca...   125   5e-27 
UniRef100_Q7X2Z6 Pseudouridine synthase n=1 Tax=uncultured Acido...   125   5e-27 
UniRef100_C3JYN9 Ribosomal large subunit pseudouridine synthase ...   125   5e-27 
UniRef100_A5VJJ7 Pseudouridine synthase n=4 Tax=Lactobacillus re...   125   5e-27 
UniRef100_B9YBL7 Putative uncharacterized protein n=1 Tax=Holdem...   125   5e-27 
UniRef100_B3XRY7 Pseudouridine synthase n=1 Tax=Lactobacillus re...   125   5e-27 
UniRef100_A3Z7X1 Pseudouridine synthase n=1 Tax=Synechococcus sp...   125   5e-27 
UniRef100_Q47AD4 Pseudouridine synthase n=1 Tax=Dechloromonas ar...   125   6e-27 
UniRef100_Q116F0 Pseudouridine synthase n=1 Tax=Trichodesmium er...   125   6e-27 
UniRef100_A0KMC0 Pseudouridine synthase n=1 Tax=Aeromonas hydrop...   125   6e-27 
UniRef100_C2EX66 Pseudouridylate synthase n=2 Tax=Lactobacillus ...   125   6e-27 
UniRef100_UPI00016B15D3 pseudouridine synthase family protein n=...   124   8e-27 
UniRef100_B4ECN4 Putative RNA pseudouridylate synthase n=1 Tax=B...   124   8e-27 
UniRef100_A1VTB3 Pseudouridine synthase n=1 Tax=Polaromonas naph...   124   8e-27 
UniRef100_Q4VR69 Pseudouridine synthase n=1 Tax=Desulfovibrio gi...   124   8e-27 
UniRef100_C2ADP6 Pseudouridine synthase family protein n=1 Tax=T...   124   8e-27 
UniRef100_B7CAK4 Pseudouridine synthase n=1 Tax=Eubacterium bifo...   124   8e-27 
UniRef100_B5QPE6 Pseudouridine synthase n=2 Tax=Lactobacillus rh...   124   8e-27 
UniRef100_A8UJI0 Pseudouridylate synthase (Ribosomal large subun...   124   8e-27 
UniRef100_Q39F40 Pseudouridine synthase, Rsu n=1 Tax=Burkholderi...   124   1e-26 
UniRef100_Q30ZZ1 Pseudouridine synthase n=1 Tax=Desulfovibrio de...   124   1e-26 
UniRef100_B2T5J8 RNA-binding S4 domain protein n=1 Tax=Burkholde...   124   1e-26 
UniRef100_B1JUF3 RNA-binding S4 domain protein n=1 Tax=Burkholde...   124   1e-26 
UniRef100_A9AXM1 Pseudouridine synthase n=1 Tax=Herpetosiphon au...   124   1e-26 
UniRef100_Q039H2 Pseudouridine synthase n=2 Tax=Lactobacillus Re...   124   1e-26 
UniRef100_B7B134 Pseudouridine synthase n=1 Tax=Mitsuokella mult...   124   1e-26 
UniRef100_A3I5L6 Pseudouridine synthase n=1 Tax=Bacillus sp. B14...   124   1e-26 
UniRef100_A2TUX3 Putative ribosomal large subunit pseudouridine ...   124   1e-26 
UniRef100_A6SZQ4 Pseudouridylate synthase n=1 Tax=Janthinobacter...   124   1e-26 
UniRef100_A5GS21 Pseudouridine synthase n=1 Tax=Synechococcus sp...   124   1e-26 
UniRef100_Q6SI36 Pseudouridine synthase n=1 Tax=uncultured marin...   124   1e-26 
UniRef100_C2HP56 Ribosomal large subunit pseudouridine synthase ...   124   1e-26 
UniRef100_C1SPF0 Pseudouridine synthase family protein n=1 Tax=D...   124   1e-26 
UniRef100_C0VWF7 Pseudouridine synthase B n=1 Tax=Corynebacteriu...   124   1e-26 
UniRef100_B7BG05 Pseudouridine synthase n=1 Tax=Parabacteroides ...   124   1e-26 
UniRef100_A6PPE5 Pseudouridine synthase n=1 Tax=Victivallis vade...   124   1e-26 
UniRef100_UPI0001666896 pseudouridine synthase n=1 Tax=Thauera s...   123   2e-26 
UniRef100_Q39WC0 Pseudouridine synthase n=1 Tax=Geobacter metall...   123   2e-26 
UniRef100_Q31PH9 Ribosomal large subunit pseudouridine synthase ...   123   2e-26 
UniRef100_Q03SA8 Pseudouridine synthase n=1 Tax=Lactobacillus br...   123   2e-26 
UniRef100_B8J038 Pseudouridine synthase n=1 Tax=Desulfovibrio de...   123   2e-26 
UniRef100_A0K8E6 Pseudouridine synthase, Rsu n=2 Tax=Burkholderi...   123   2e-26 
UniRef100_Q05XV7 Pseudouridine synthase n=1 Tax=Synechococcus sp...   123   2e-26 
UniRef100_C2FID1 Pseudouridylate synthase n=2 Tax=Lactobacillus ...   123   2e-26 
UniRef100_B3K0W7 Pseudouridine synthase n=1 Tax=Geobacter sp. M2...   123   2e-26 
UniRef100_A6EWD1 Pseudouridine synthase n=1 Tax=Marinobacter alg...   123   2e-26 
UniRef100_A6DF49 Pseudouridine synthase n=1 Tax=Lentisphaera ara...   123   2e-26 
UniRef100_A4CBK5 Pseudouridine synthase n=1 Tax=Pseudoalteromona...   123   2e-26 
UniRef100_A0Z759 Pseudouridine synthase n=1 Tax=marine gamma pro...   123   2e-26 
UniRef100_Q9RVX5 Pseudouridine synthase n=1 Tax=Deinococcus radi...   123   2e-26 
UniRef100_Q3A507 Pseudouridine synthase n=1 Tax=Pelobacter carbi...   123   2e-26 
UniRef100_B9KC52 Pseudouridine synthase n=1 Tax=Thermotoga neapo...   123   2e-26 
UniRef100_B0T2K0 Pseudouridine synthase n=1 Tax=Caulobacter sp. ...   123   2e-26 
UniRef100_C0CF26 Putative uncharacterized protein n=1 Tax=Subdol...   123   2e-26 
UniRef100_A6GQ19 Propable 16S pseudouridylate synthase n=1 Tax=L...   123   2e-26 
UniRef100_A4BCE8 Pseudouridine synthase n=1 Tax=Reinekea sp. MED...   123   2e-26 
UniRef100_Q97I05 Pseudouridine synthase n=1 Tax=Clostridium acet...   122   3e-26 
UniRef100_Q7VZD5 Putative RNA pseudouridylate synthase n=1 Tax=B...   122   3e-26 
UniRef100_Q5ZVJ3 Pseudouridine synthase n=1 Tax=Legionella pneum...   122   3e-26 
UniRef100_Q3KG71 Pseudouridine synthase n=1 Tax=Pseudomonas fluo...   122   3e-26 
UniRef100_Q21SK4 RNA-binding S4 n=1 Tax=Rhodoferax ferrireducens...   122   3e-26 
UniRef100_C1D6D8 Pseudouridine synthase family protein n=1 Tax=L...   122   3e-26 
UniRef100_A6ES27 Pseudouridylate synthase (Ribosomal large subun...   122   3e-26 
UniRef100_Q5WW66 Pseudouridine synthase n=1 Tax=Legionella pneum...   122   4e-26 
UniRef100_Q0KA13 16S rRNA uridine-516 pseudouridylate synthase n...   122   4e-26 
UniRef100_Q04T62 Pseudouridine synthase n=2 Tax=Leptospira borgp...   122   4e-26 
UniRef100_A8MFF7 Pseudouridine synthase n=1 Tax=Alkaliphilus ore...   122   4e-26 
UniRef100_A5IBT9 Pseudouridine synthase n=1 Tax=Legionella pneum...   122   4e-26 
UniRef100_A1WF63 RNA-binding S4 domain protein n=1 Tax=Vermineph...   122   4e-26 
UniRef100_Q1VZG9 Putative ribosomal large subunit pseudouridine ...   122   4e-26 
UniRef100_C0ZC81 Probable ribosomal large subunit pseudouridine ...   122   4e-26 
UniRef100_B7RYF8 Pseudouridine synthase n=1 Tax=marine gamma pro...   122   4e-26 
UniRef100_B8CBS5 Pseudouridylate synthase (Fragment) n=1 Tax=Tha...   122   4e-26 
UniRef100_Q5X5B8 Pseudouridine synthase n=1 Tax=Legionella pneum...   122   5e-26 
UniRef100_Q3Z8C8 Pseudouridine synthase n=1 Tax=Dehalococcoides ...   122   5e-26 
UniRef100_B9MJY5 Pseudouridine synthase n=1 Tax=Anaerocellum the...   122   5e-26 
UniRef100_B7K6Y4 Pseudouridine synthase n=1 Tax=Cyanothece sp. P...   122   5e-26 
UniRef100_B3R2C0 Putative 16S rRNA uridine-516 pseudouridylate s...   122   5e-26 
UniRef100_B2GC28 Pseudouridine synthase n=1 Tax=Lactobacillus fe...   122   5e-26 
UniRef100_A0L6G3 Pseudouridine synthase n=1 Tax=Magnetococcus sp...   122   5e-26 
UniRef100_C3X184 Pseudouridylate synthase n=1 Tax=Oxalobacter fo...   122   5e-26 
UniRef100_C1XV14 Pseudouridine synthase family protein n=1 Tax=M...   122   5e-26 
UniRef100_C0WYU9 Pseudouridylate synthase n=1 Tax=Lactobacillus ...   122   5e-26 
UniRef100_A2W999 Pseudouridine synthase Rsu n=1 Tax=Burkholderia...   122   5e-26 
UniRef100_Q7WJG9 Putative RNA pseudouridylate synthase n=1 Tax=B...   121   7e-26 
UniRef100_Q7WAC8 Putative RNA pseudouridylate synthase n=1 Tax=B...   121   7e-26 
UniRef100_Q7NSN4 Pseudouridine synthase n=1 Tax=Chromobacterium ...   121   7e-26 
UniRef100_Q2SD40 Pseudouridine synthase n=1 Tax=Hahella chejuens...   121   7e-26 
UniRef100_Q1IJT7 Pseudouridine synthase n=1 Tax=Acidobacteria ba...   121   7e-26 
UniRef100_C3X7Q2 Ribosomal large subunit pseudouridine synthase ...   121   7e-26 
UniRef100_C2KPR0 Possible pseudouridine synthase n=1 Tax=Mobilun...   121   7e-26 
UniRef100_C2ESD0 Ribosomal large subunit pseudouridine synthase ...   121   7e-26 
UniRef100_C1DRQ0 Pseudouridine synthase n=1 Tax=Azotobacter vine...   121   7e-26 
UniRef100_UPI0001668E7E pseudouridine synthase n=1 Tax=Thauera s...   121   9e-26 
UniRef100_Q15S04 Pseudouridine synthase n=1 Tax=Pseudoalteromona...   121   9e-26 
UniRef100_A9MPZ9 Pseudouridine synthase n=1 Tax=Salmonella enter...   121   9e-26 
UniRef100_Q1Q1Q0 Pseudouridine synthase n=1 Tax=Candidatus Kuene...   121   9e-26 
UniRef100_Q256A5 Pseudouridine synthase n=1 Tax=Chlamydophila fe...   120   1e-25 
UniRef100_Q1LNG1 Pseudouridine synthase, Rsu n=1 Tax=Ralstonia m...   120   1e-25 
UniRef100_B2JA39 Pseudouridine synthase n=1 Tax=Nostoc punctifor...   120   1e-25 
UniRef100_A4SKU1 Pseudouridine synthase n=1 Tax=Aeromonas salmon...   120   1e-25 
UniRef100_Q2B4L3 Pseudouridine synthase n=1 Tax=Bacillus sp. NRR...   120   1e-25 
UniRef100_C0GNA4 RNA-binding S4 domain protein n=1 Tax=Desulfona...   120   1e-25 
UniRef100_B9Z2I5 RNA-binding S4 domain protein n=1 Tax=Lutiella ...   120   1e-25 
UniRef100_B9DCC1 Pseudouridine synthase n=1 Tax=Tolumonas auensi...   120   1e-25 
UniRef100_B3KL67 Pseudouridine synthase n=1 Tax=Geobacillus sp. ...   120   1e-25 
UniRef100_A8CTW2 Pseudouridine synthase n=1 Tax=Dehalococcoides ...   120   1e-25 
UniRef100_A6BDV2 Pseudouridine synthase n=1 Tax=Dorea longicaten...   120   1e-25 
UniRef100_A0XZJ5 Pseudouridine synthase n=1 Tax=Alteromonadales ...   120   1e-25 
UniRef100_B9DN42 RNA pseudouridine synthase n=1 Tax=Staphylococc...   120   1e-25 
UniRef100_B5YF67 Ribosomal large subunit pseudouridine synthase ...   120   1e-25 
UniRef100_C2EMW4 Pseudouridylate synthase n=2 Tax=Lactobacillus ...   120   1e-25 
UniRef100_B4AWJ2 Pseudouridine synthase n=1 Tax=Cyanothece sp. P...   120   1e-25 
UniRef100_B1FYX6 RNA-binding S4 domain protein n=1 Tax=Burkholde...   120   1e-25 
UniRef100_B1X5I1 Pseudouridine synthase, Rsu n=1 Tax=Paulinella ...   120   1e-25 
UniRef100_UPI0000E0E49C pseudouridine synthase (makes pseudourid...   120   2e-25 
UniRef100_Q5L4Y4 Pseudouridine synthase n=1 Tax=Chlamydophila ab...   120   2e-25 
UniRef100_Q2VZP5 Pseudouridine synthase n=1 Tax=Magnetospirillum...   120   2e-25 
UniRef100_Q2L1H5 Ribosomal large subunit pseudouridine synthase ...   120   2e-25 
UniRef100_B5XS25 Pseudouridine synthase n=1 Tax=Klebsiella pneum...   120   2e-25 
UniRef100_B4U639 Pseudouridine synthase n=1 Tax=Hydrogenobaculum...   120   2e-25 
UniRef100_A6QCU0 Pseudouridine synthase n=1 Tax=Sulfurovum sp. N...   120   2e-25 
UniRef100_A6LLC7 RNA-binding S4 domain protein n=1 Tax=Thermosip...   120   2e-25 
UniRef100_Q2BK76 Pseudouridine synthase n=1 Tax=Neptuniibacter c...   120   2e-25 
UniRef100_B4ANS1 Pseudouridine synthase n=1 Tax=Bacillus pumilus...   120   2e-25 
UniRef100_A8UCI7 Pseudouridine synthase n=1 Tax=Carnobacterium s...   120   2e-25 
UniRef100_Q7N4A0 Pseudouridine synthase n=1 Tax=Photorhabdus lum...   119   2e-25 
UniRef100_Q470D4 Pseudouridine synthase, Rsu n=1 Tax=Ralstonia e...   119   2e-25 
UniRef100_Q3AVD5 Pseudouridine synthase n=1 Tax=Synechococcus sp...   119   2e-25 
UniRef100_B1HRN3 Pseudouridine synthase n=1 Tax=Lysinibacillus s...   119   2e-25 
UniRef100_A6W0R8 Pseudouridine synthase n=1 Tax=Marinomonas sp. ...   119   2e-25 
UniRef100_A6T7X7 Pseudouridine synthase n=1 Tax=Klebsiella pneum...   119   2e-25 
UniRef100_A1STT7 Pseudouridine synthase n=1 Tax=Psychromonas ing...   119   2e-25 
UniRef100_C2E8N8 Ribosomal large subunit pseudouridine synthase ...   119   2e-25 
UniRef100_B5MIY1 Pseudouridine synthase n=2 Tax=Salmonella enter...   119   2e-25 
UniRef100_B4W2G6 Pseudouridine synthase n=1 Tax=Microcoleus chth...   119   2e-25 
UniRef100_Q8RFI0 Pseudouridine synthase n=1 Tax=Fusobacterium nu...   119   3e-25 
UniRef100_B3PFT5 Pseudouridine synthase n=1 Tax=Cellvibrio japon...   119   3e-25 
UniRef100_B0JNY1 Pseudouridine synthase n=1 Tax=Microcystis aeru...   119   3e-25 
UniRef100_A8FGD9 Pseudouridine synthase n=1 Tax=Bacillus pumilus...   119   3e-25 
UniRef100_A4X690 Pseudouridine synthase n=1 Tax=Salinispora trop...   119   3e-25 
UniRef100_A4T0I2 Ribosomal large subunit pseudouridine synthase ...   119   3e-25 
UniRef100_Q08MY5 Pseudouridine synthase n=1 Tax=Stigmatella aura...   119   3e-25 
UniRef100_C3X1E1 Ribosomal large subunit pseudouridine synthase ...   119   3e-25 
UniRef100_A4CVK3 Pseudouridine synthase n=1 Tax=Synechococcus sp...   119   3e-25 
UniRef100_Q8Z7D5 Ribosomal large subunit pseudouridine synthase ...   119   3e-25 
UniRef100_UPI00003846BF COG1187: 16S rRNA uridine-516 pseudourid...   119   4e-25 
UniRef100_Q8XZJ4 Putative uncharacterized protein n=1 Tax=Ralsto...   119   4e-25 
UniRef100_Q57NT9 Pseudouridine synthase n=1 Tax=Salmonella enter...   119   4e-25 
UniRef100_Q24V73 Pseudouridine synthase n=1 Tax=Desulfitobacteri...   119   4e-25 
UniRef100_Q1JDC9 Pseudouridine synthase n=1 Tax=Streptococcus py...   119   4e-25 
UniRef100_B8FPJ7 Pseudouridine synthase n=1 Tax=Desulfitobacteri...   119   4e-25 
UniRef100_A6V2P7 Pseudouridine synthase n=1 Tax=Pseudomonas aeru...   119   4e-25 
UniRef100_A5G4G5 Pseudouridine synthase n=1 Tax=Geobacter uranii...   119   4e-25 
UniRef100_A5D1T3 Pseudouridine synthase n=1 Tax=Pelotomaculum th...   119   4e-25 
UniRef100_A1W3A0 RNA-binding S4 domain protein n=1 Tax=Acidovora...   119   4e-25 
UniRef100_C0N5Q1 Putative uncharacterized protein n=1 Tax=Methyl...   119   4e-25 
UniRef100_A9D7Q6 Pseudouridine synthase n=1 Tax=Shewanella benth...   119   4e-25 
UniRef100_Q8ZP51 Ribosomal large subunit pseudouridine synthase ...   119   4e-25 
UniRef100_UPI000197BC31 hypothetical protein PROVRETT_02139 n=1 ...   118   6e-25 
UniRef100_B3E104 Pseudouridine synthase n=1 Tax=Methylacidiphilu...   118   6e-25 
UniRef100_A8YV29 Pseudouridine synthase n=1 Tax=Lactobacillus he...   118   6e-25 
UniRef100_A8AG67 Pseudouridine synthase n=1 Tax=Citrobacter kose...   118   6e-25 
UniRef100_A5GM08 Pseudouridine synthase n=1 Tax=Synechococcus sp...   118   6e-25 
UniRef100_A1VDC0 Pseudouridine synthase n=1 Tax=Desulfovibrio vu...   118   6e-25 
UniRef100_Q26G32 Ribosomal large subunit pseudouridine synthase ...   118   6e-25 
UniRef100_C3WHG3 Ribosomal small subunit pseudouridine synthase ...   118   6e-25 
UniRef100_Q38WV5 Pseudouridine synthase n=2 Tax=Lactobacillus sa...   118   6e-25 
UniRef100_B2Q3M4 Pseudouridine synthase n=1 Tax=Providencia stua...   118   6e-25 
UniRef100_A0YN86 Pseudouridine synthase n=1 Tax=Lyngbya sp. PCC ...   118   6e-25 
UniRef100_O66829 Uncharacterized RNA pseudouridine synthase aq_5...   118   6e-25 
UniRef100_Q31GA0 Pseudouridine synthase n=1 Tax=Thiomicrospira c...   118   7e-25 
UniRef100_Q2JPT0 Pseudouridine synthase n=1 Tax=Synechococcus sp...   118   7e-25 
UniRef100_B2JIC9 RNA-binding S4 domain protein n=1 Tax=Burkholde...   118   7e-25 
UniRef100_C3PGG1 Putative pseudouridylate synthase n=1 Tax=Coryn...   118   7e-25 
UniRef100_C2D4J8 Pseudouridylate synthase n=1 Tax=Lactobacillus ...   118   7e-25 
UniRef100_C0XT67 16S rRNA uridine-516 pseudouridylate synthase n...   118   7e-25 
UniRef100_C0XLQ6 Pseudouridylate synthase n=1 Tax=Lactobacillus ...   118   7e-25 
UniRef100_C0WTI3 Pseudouridylate synthase n=1 Tax=Lactobacillus ...   118   7e-25 
UniRef100_C0ACF0 RNA-binding S4 domain protein n=1 Tax=Opitutace...   118   7e-25 
UniRef100_B6X959 Pseudouridine synthase n=1 Tax=Providencia rust...   118   7e-25 
UniRef100_Q9Z742 Pseudouridine synthase n=1 Tax=Chlamydophila pn...   117   9e-25 
UniRef100_A9NGL0 rRNA pseudouridylate synthase n=1 Tax=Acholepla...   117   9e-25 
UniRef100_A7MN94 Pseudouridine synthase n=1 Tax=Cronobacter saka...   117   9e-25 
UniRef100_Q8GDU7 Pseudouridine synthase (Fragment) n=1 Tax=Helio...   117   9e-25 
UniRef100_Q6SGE5 Pseudouridine synthase n=1 Tax=uncultured marin...   117   9e-25 
UniRef100_A3Z1L5 Pseudouridine synthase n=1 Tax=Synechococcus sp...   117   9e-25 
UniRef100_UPI0001A50512 pseudouridine synthase n=1 Tax=Micromono...   117   1e-24 
UniRef100_UPI00005FA5D4 COG1187: 16S rRNA uridine-516 pseudourid...   117   1e-24 
UniRef100_Q8FTK7 Pseudouridine synthase n=1 Tax=Corynebacterium ...   117   1e-24 
UniRef100_Q82X60 Pseudouridine synthase n=1 Tax=Nitrosomonas eur...   117   1e-24 
UniRef100_Q3IL35 Pseudouridine synthase n=1 Tax=Pseudoalteromona...   117   1e-24 
UniRef100_B9DSI1 Pseudouridine synthase n=1 Tax=Streptococcus ub...   117   1e-24 
UniRef100_B8ZKU8 Pseudouridine synthase n=1 Tax=Streptococcus pn...   117   1e-24 
UniRef100_A4QE19 Pseudouridine synthase n=1 Tax=Corynebacterium ...   117   1e-24 
UniRef100_C0X5C9 Pseudouridylate synthase n=4 Tax=Enterococcus f...   117   1e-24 
UniRef100_B5INB4 Pseudouridine synthase n=1 Tax=Cyanobium sp. PC...   117   1e-24 
UniRef100_A3ESK0 Pseudouridine synthase n=1 Tax=Leptospirillum s...   117   1e-24 
UniRef100_Q8NQK8 Pseudouridine synthase n=1 Tax=Corynebacterium ...   117   2e-24 
UniRef100_Q03F83 Pseudouridine synthase n=1 Tax=Pediococcus pent...   117   2e-24 
UniRef100_A8GF73 Pseudouridine synthase n=1 Tax=Serratia proteam...   117   2e-24 
UniRef100_A5FR81 Pseudouridine synthase n=2 Tax=Dehalococcoides ...   117   2e-24 
UniRef100_A3CQH5 Pseudouridine synthase n=1 Tax=Streptococcus sa...   117   2e-24 
UniRef100_Q6M5E9 Pseudouridine synthase n=1 Tax=Corynebacterium ...   117   2e-24 
UniRef100_C1D1L5 Putative RNA pseudouridylate synthase n=1 Tax=D...   117   2e-24 
UniRef100_B6ARH6 Pseudouridine synthase, Rsu n=1 Tax=Leptospiril...   117   2e-24 
UniRef100_B0G5Q1 Pseudouridine synthase n=1 Tax=Dorea formicigen...   117   2e-24 
UniRef100_A3RXR9 Ribosomal large subunit pseudouridine synthase ...   117   2e-24 
UniRef100_A1IGB2 Pseudouridine synthase n=1 Tax=Vibrio fischeri ...   117   2e-24 
UniRef100_Q9HZ55 Ribosomal large subunit pseudouridine synthase ...   117   2e-24 
UniRef100_Q72BG7 Pseudouridine synthase n=1 Tax=Desulfovibrio vu...   116   2e-24 
UniRef100_Q6AR36 Related to pseudouridine synthase n=1 Tax=Desul...   116   2e-24 
UniRef100_Q8X4Q8 Ribosomal large subunit pseudouridine synthase ...   116   2e-24 
UniRef100_A9GX03 Pseudouridine synthase n=1 Tax=Sorangium cellul...   116   2e-24 
UniRef100_A8FTX9 Pseudouridine synthase n=1 Tax=Shewanella sedim...   116   2e-24 
UniRef100_A4G7T1 Pseudouridine synthase n=1 Tax=Herminiimonas ar...   116   2e-24 
UniRef100_A1AAN8 Pseudouridine synthase n=1 Tax=Escherichia coli...   116   2e-24 
UniRef100_B3XBZ2 Pseudouridine synthase n=1 Tax=Escherichia coli...   116   2e-24 
UniRef100_P37765 Ribosomal large subunit pseudouridine synthase ...   116   2e-24 
UniRef100_Q8FHV4 Ribosomal large subunit pseudouridine synthase ...   116   2e-24 
UniRef100_UPI00005F99AA COG1187: 16S rRNA uridine-516 pseudourid...   116   3e-24 
UniRef100_UPI00005F866B COG1187: 16S rRNA uridine-516 pseudourid...   116   3e-24 
UniRef100_UPI00005F7C7A COG1187: 16S rRNA uridine-516 pseudourid...   116   3e-24 
UniRef100_Q928U6 Pseudouridine synthase n=1 Tax=Listeria innocua...   116   3e-24 
UniRef100_Q4A690 Pseudouridine synthase n=1 Tax=Mycoplasma synov...   116   3e-24 
UniRef100_B0TFD8 Pseudouridine synthase n=1 Tax=Heliobacterium m...   116   3e-24 
UniRef100_A4G4R8 Putative ribosomal large subunit pseudouridine ...   116   3e-24 
UniRef100_Q9JRU0 Pseudouridine synthase n=1 Tax=Chlamydophila pn...   116   3e-24 
UniRef100_C3X7K3 Pseudouridylate synthase n=1 Tax=Oxalobacter fo...   116   3e-24 
UniRef100_C1RJR9 Pseudouridine synthase family protein n=1 Tax=C...   116   3e-24 
UniRef100_B9Z6M4 RNA-binding S4 domain protein n=1 Tax=Lutiella ...   116   3e-24 
UniRef100_B2DH45 Pseudouridine synthase n=1 Tax=Streptococcus pn...   116   3e-24 
UniRef100_B1S2I9 Pseudouridine synthase n=1 Tax=Streptococcus pn...   116   3e-24 
UniRef100_P59815 Ribosomal large subunit pseudouridine synthase ...   116   3e-24 
UniRef100_Q73PC4 Pseudouridine synthase n=1 Tax=Treponema dentic...   115   4e-24 
UniRef100_Q5E613 Pseudouridine synthase n=1 Tax=Vibrio fischeri ...   115   4e-24 
UniRef100_Q32GR9 Pseudouridine synthase n=1 Tax=Shigella dysente...   115   4e-24 
UniRef100_B8GT75 Pseudouridine synthase n=1 Tax=Thioalkalivibrio...   115   4e-24 
UniRef100_B5FDC6 Pseudouridine synthase n=1 Tax=Vibrio fischeri ...   115   4e-24 
UniRef100_B2UMD6 Pseudouridine synthase n=1 Tax=Akkermansia muci...   115   4e-24 
UniRef100_A9KNY1 Pseudouridine synthase n=1 Tax=Clostridium phyt...   115   4e-24 
UniRef100_B6XEI9 Pseudouridine synthase n=1 Tax=Providencia alca...   115   4e-24 
UniRef100_B5S0C5 Ribosomal small subunit pseudouridine synthase ...   115   4e-24 
UniRef100_Q0TN54 Pseudouridine synthase n=5 Tax=Clostridium perf...   115   4e-24 
UniRef100_B1BMZ7 Pseudouridine synthase n=2 Tax=Clostridium perf...   115   4e-24 
UniRef100_A8UYH6 Pseudouridine synthase n=1 Tax=Hydrogenivirga s...   115   4e-24 
UniRef100_Q0SQT2 Pseudouridine synthase n=1 Tax=Clostridium perf...   115   5e-24 
UniRef100_Q04MH0 Pseudouridine synthase n=2 Tax=Streptococcus pn...   115   5e-24 
UniRef100_B3R0E6 Pseudouridine synthase n=1 Tax=Candidatus Phyto...   115   5e-24 
UniRef100_B1I906 Pseudouridine synthase n=1 Tax=Streptococcus pn...   115   5e-24 
UniRef100_A8LYU1 Pseudouridine synthase n=1 Tax=Salinispora aren...   115   5e-24 
UniRef100_A4J9G8 Pseudouridine synthase n=1 Tax=Desulfotomaculum...   115   5e-24 
UniRef100_A1TA74 Pseudouridine synthase n=1 Tax=Mycobacterium va...   115   5e-24 
UniRef100_C2KGK6 Pseudouridylate synthase n=1 Tax=Lactobacillus ...   115   5e-24 
UniRef100_B6FCS9 Pseudouridine synthase n=1 Tax=Enterobacter can...   115   5e-24 
UniRef100_B1ELT8 Pseudouridine synthase n=1 Tax=Escherichia albe...   115   5e-24 
UniRef100_B0VG32 Pseudouridine synthase n=1 Tax=Candidatus Cloac...   115   5e-24 
UniRef100_A6C4P7 Pseudouridine synthase n=1 Tax=Planctomyces mar...   115   5e-24 
UniRef100_A6AE11 Pseudouridine synthase n=1 Tax=Vibrio cholerae ...   115   5e-24 
UniRef100_C1CB54 Ribosomal small subunit pseudouridine synthase ...   115   5e-24 
UniRef100_Q9KSS7 Ribosomal large subunit pseudouridine synthase ...   115   5e-24 
UniRef100_UPI000185CACC ribosomal large subunit pseudouridine sy...   115   6e-24 
UniRef100_Q6D4U9 Pseudouridine synthase n=1 Tax=Pectobacterium a...   115   6e-24 
UniRef100_Q21JZ7 Pseudouridine synthase n=1 Tax=Saccharophagus d...   115   6e-24 
UniRef100_B9M4U8 Pseudouridine synthase n=1 Tax=Geobacter sp. FR...   115   6e-24 
UniRef100_B2U0F9 Pseudouridine synthase n=1 Tax=Shigella boydii ...   115   6e-24 
UniRef100_B1KJZ3 Pseudouridine synthase n=1 Tax=Shewanella woody...   115   6e-24 
UniRef100_A8EQW1 Pseudouridine synthase n=1 Tax=Arcobacter butzl...   115   6e-24 
UniRef100_B0NAJ1 Pseudouridine synthase n=1 Tax=Clostridium scin...   115   6e-24 
UniRef100_O32069 Putative 16S pseudouridylate synthase n=1 Tax=B...   114   8e-24 
UniRef100_B8HSY9 Pseudouridine synthase n=1 Tax=Cyanothece sp. P...   114   8e-24 
UniRef100_B6YRL0 Pseudouridine synthase n=1 Tax=Candidatus Azoba...   114   8e-24 
UniRef100_B1MB30 Pseudouridine synthase n=1 Tax=Mycobacterium ab...   114   8e-24 
UniRef100_A9IT19 Pseudouridylate synthase n=1 Tax=Bordetella pet...   114   8e-24 
UniRef100_A6T0Z1 Pseudouridine synthase n=1 Tax=Janthinobacteriu...   114   8e-24 
UniRef100_C2BPU0 Pseudouridine synthase B n=1 Tax=Corynebacteriu...   114   8e-24 
UniRef100_C0WLF7 Pseudouridine synthase B n=1 Tax=Corynebacteriu...   114   8e-24 
UniRef100_B2E643 Pseudouridine synthase n=1 Tax=Streptococcus pn...   114   8e-24 
UniRef100_B1DJ96 Pseudouridine synthase n=1 Tax=Paenibacillus sp...   114   8e-24 
UniRef100_A6CQJ6 Pseudouridine synthase n=1 Tax=Bacillus sp. SG-...   114   8e-24 
UniRef100_C1CC69 RNA pseudouridine synthase family protein n=6 T...   114   8e-24 
UniRef100_Q5NZ84 Pseudouridine synthase n=1 Tax=Aromatoleum arom...   114   1e-23 
UniRef100_Q2RIS4 Pseudouridine synthase n=1 Tax=Moorella thermoa...   114   1e-23 
UniRef100_Q1QZA0 Pseudouridine synthase n=1 Tax=Chromohalobacter...   114   1e-23 
UniRef100_B2GK25 Pseudouridine synthase n=1 Tax=Kocuria rhizophi...   114   1e-23 
UniRef100_B1Y0S2 RNA-binding S4 domain protein n=1 Tax=Leptothri...   114   1e-23 
UniRef100_Q0F269 Pseudouridine synthase n=1 Tax=Mariprofundus fe...   114   1e-23 
UniRef100_C1M554 23S rRNA pseudouridylate synthase B n=1 Tax=Cit...   114   1e-23 
UniRef100_B7AC16 Pseudouridine synthase n=1 Tax=Thermus aquaticu...   114   1e-23 
UniRef100_Q3JC97 Pseudouridine synthase n=2 Tax=Nitrosococcus oc...   114   1e-23 
UniRef100_A6G735 Pseudouridine synthase n=1 Tax=Plesiocystis pac...   114   1e-23 
UniRef100_A5MDW3 Pseudouridine synthase n=1 Tax=Streptococcus pn...   114   1e-23 
UniRef100_A5LWU9 Pseudouridine synthase n=2 Tax=Streptococcus pn...   114   1e-23 
UniRef100_A3ZQL4 Pseudouridine synthase n=1 Tax=Blastopirellula ...   114   1e-23 
UniRef100_A3JIZ1 Pseudouridine synthase n=1 Tax=Marinobacter sp....   114   1e-23 
UniRef100_A0ZM08 Pseudouridine synthase n=1 Tax=Nodularia spumig...   114   1e-23 
UniRef100_Q8F3V8 Pseudouridine synthase n=1 Tax=Leptospira inter...   114   1e-23 
UniRef100_Q740D8 Pseudouridine synthase n=1 Tax=Mycobacterium av...   114   1e-23 
UniRef100_Q72RU1 Pseudouridine synthase n=1 Tax=Leptospira inter...   114   1e-23 
UniRef100_Q188I9 Pseudouridine synthase n=2 Tax=Clostridium diff...   114   1e-23 
UniRef100_B9MC28 RNA-binding S4 domain protein n=1 Tax=Diaphorob...   114   1e-23 
UniRef100_B8H224 Ribosomal large subunit pseudouridine synthase ...   114   1e-23 
UniRef100_B1XSL1 RNA-binding S4 domain protein n=1 Tax=Polynucle...   114   1e-23 
UniRef100_A5WGV6 Pseudouridine synthase n=1 Tax=Psychrobacter sp...   114   1e-23 
UniRef100_C2HX66 Ribosomal large subunit pseudouridine synthase ...   114   1e-23 
UniRef100_C2B5N9 Putative uncharacterized protein n=1 Tax=Citrob...   114   1e-23 
UniRef100_B1STQ8 Pseudouridine synthase n=1 Tax=Geobacillus sp. ...   114   1e-23 
UniRef100_A8YCI6 Pseudouridine synthase n=1 Tax=Microcystis aeru...   114   1e-23 
UniRef100_UPI00018510EA pseudouridylate synthase (ribosomal smal...   113   2e-23 
UniRef100_Q8Y4U0 Pseudouridine synthase n=1 Tax=Listeria monocyt...   113   2e-23 
UniRef100_Q8DL42 Pseudouridine synthase n=1 Tax=Thermosynechococ...   113   2e-23 
UniRef100_Q1AW24 Pseudouridine synthase n=1 Tax=Rubrobacter xyla...   113   2e-23 
UniRef100_B7MUA7 Pseudouridine synthase n=1 Tax=Escherichia coli...   113   2e-23 
UniRef100_A3QF64 Pseudouridine synthase n=1 Tax=Shewanella loihi...   113   2e-23 
UniRef100_A4IRX8 Pseudouridine synthase n=2 Tax=Geobacillus RepI...   113   2e-23 
UniRef100_A5MS85 Pseudouridine synthase n=1 Tax=Streptococcus pn...   113   2e-23 
UniRef100_A5M4S7 Ribosomal small subunit pseudouridine synthase ...   113   2e-23 
UniRef100_UPI0001A44F3B 23S rRNA pseudouridylate synthase B n=1 ...   113   2e-23 
UniRef100_Q6A7X9 Pseudouridine synthase n=1 Tax=Propionibacteriu...   113   2e-23 
UniRef100_B6EJI1 Pseudouridine synthase n=1 Tax=Aliivibrio salmo...   113   2e-23 
UniRef100_B2T378 Pseudouridine synthase n=1 Tax=Burkholderia phy...   113   2e-23 
UniRef100_A0QYQ1 Pseudouridine synthase n=1 Tax=Mycobacterium sm...   113   2e-23 
UniRef100_Q3DVB6 Pseudouridine synthase n=3 Tax=Streptococcus ag...   113   2e-23 
UniRef100_C1XCH1 Ribosomal small subunit pseudouridine synthase ...   113   2e-23 
UniRef100_C0BWD9 Putative uncharacterized protein n=1 Tax=Clostr...   113   2e-23 
UniRef100_UPI0001A43BA0 23S rRNA pseudouridylate synthase B n=1 ...   112   3e-23 
UniRef100_Q3SJF3 Pseudouridine synthase n=1 Tax=Thiobacillus den...   112   3e-23 
UniRef100_B4S1I5 Pseudouridine synthase n=1 Tax=Alteromonas macl...   112   3e-23 
UniRef100_B4RAZ5 Pseudouridine synthase n=1 Tax=Phenylobacterium...   112   3e-23 
UniRef100_A5EVQ2 Pseudouridine synthase n=1 Tax=Dichelobacter no...   112   3e-23 
UniRef100_Q05ZP4 Pseudouridine synthase n=1 Tax=Synechococcus sp...   112   3e-23 
UniRef100_B4EW31 Pseudouridine synthase n=2 Tax=Proteus mirabili...   112   3e-23 
UniRef100_B1REY5 Pseudouridine synthase n=1 Tax=Clostridium perf...   112   3e-23 
UniRef100_A7Z7U5 Pseudouridine synthase n=1 Tax=Bacillus amyloli...   112   4e-23 
UniRef100_A5F1Z7 Pseudouridine synthase n=1 Tax=Vibrio cholerae ...   112   4e-23 
UniRef100_A1AW08 Pseudouridine synthase n=1 Tax=Candidatus Ruthi...   112   4e-23 
UniRef100_A0QH61 Pseudouridine synthase n=1 Tax=Mycobacterium av...   112   4e-23 
UniRef100_C2M0E1 Ribosomal small subunit pseudouridine synthase ...   112   4e-23 
UniRef100_C2CMC7 Pseudouridine synthase B n=1 Tax=Corynebacteriu...   112   4e-23 
UniRef100_B1GAM8 Pseudouridine synthase n=1 Tax=Burkholderia gra...   112   4e-23 
UniRef100_A4RSB2 Predicted protein (Fragment) n=1 Tax=Ostreococc...   112   4e-23 
UniRef100_Q6MIA3 Putative pseudouridylate synthase n=1 Tax=Bdell...   112   5e-23 
UniRef100_C0QQ65 Ribosomal large subunit pseudouridine synthase ...   112   5e-23 
UniRef100_B2VKU2 Pseudouridine synthase n=1 Tax=Erwinia tasmanie...   112   5e-23 
UniRef100_B2JKT7 Pseudouridine synthase n=1 Tax=Burkholderia phy...   112   5e-23 
UniRef100_C2BWA1 Pseudouridylate synthase n=1 Tax=Mobiluncus cur...   112   5e-23 
UniRef100_B5VZE6 Pseudouridine synthase n=1 Tax=Arthrospira maxi...   112   5e-23 
UniRef100_Q01DI0 Propable 16S pseudouridylate synthase (ISS) n=1...   112   5e-23 
UniRef100_Q98QM4 RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE ...   111   7e-23 
UniRef100_Q4L797 Pseudouridine synthase n=1 Tax=Staphylococcus h...   111   7e-23 
UniRef100_Q140U9 Pseudouridine synthase n=1 Tax=Burkholderia xen...   111   7e-23 
UniRef100_Q04AZ0 Pseudouridine synthase n=2 Tax=Lactobacillus de...   111   7e-23 
UniRef100_A8AV32 Pseudouridine synthase n=1 Tax=Streptococcus go...   111   7e-23 
UniRef100_A4T9Z6 Pseudouridine synthase n=1 Tax=Mycobacterium gi...   111   7e-23 
UniRef100_A0PSX4 Pseudouridine synthase n=2 Tax=Mycobacterium Re...   111   7e-23 
UniRef100_Q1NWQ7 Pseudouridine synthase n=1 Tax=delta proteobact...   111   7e-23 
UniRef100_Q1NM73 Pseudouridine synthase n=1 Tax=delta proteobact...   111   7e-23 
UniRef100_C3WSA9 Ribosomal small subunit pseudouridine synthase ...   111   7e-23 
UniRef100_B9XS61 Pseudouridine synthase n=1 Tax=bacterium Ellin5...   111   7e-23 
UniRef100_B7YEB8 Pseudouridine synthase n=2 Tax=Geobacillus RepI...   111   7e-23 
UniRef100_B7R8F6 Pseudouridine synthase n=2 Tax=Thermoanaerobact...   111   7e-23 
UniRef100_B6G0R9 Pseudouridine synthase n=1 Tax=Clostridium hira...   111   7e-23 
UniRef100_B4VCK6 Pseudouridine synthase n=1 Tax=Streptomyces sp....   111   7e-23 
UniRef100_B7FTM7 Predicted protein n=1 Tax=Phaeodactylum tricorn...   111   7e-23 
UniRef100_Q6NHE3 Pseudouridine synthase n=1 Tax=Corynebacterium ...   111   9e-23 
UniRef100_B4UD04 Pseudouridine synthase n=1 Tax=Anaeromyxobacter...   111   9e-23 
UniRef100_A1TZT4 Pseudouridine synthase n=1 Tax=Marinobacter aqu...   111   9e-23 
UniRef100_Q4ES27 Pseudouridine synthase n=1 Tax=Listeria monocyt...   111   9e-23 
UniRef100_C2LRF1 Putative ribosomal small subunit pseudouridine ...   111   9e-23 
UniRef100_C1YTT2 Pseudouridine synthase family protein n=1 Tax=N...   111   9e-23 
UniRef100_C1SCT2 Pseudouridine synthase family protein n=1 Tax=C...   111   9e-23 
UniRef100_B7Y2D7 Pseudouridine synthase n=1 Tax=Blautia hansenii...   111   9e-23 
UniRef100_UPI000185BFEB ribosomal large subunit pseudouridine sy...   110   1e-22 
UniRef100_Q5KW18 Pseudouridine synthase n=1 Tax=Geobacillus kaus...   110   1e-22 
UniRef100_Q1D5Q2 Pseudouridine synthase n=1 Tax=Myxococcus xanth...   110   1e-22 
UniRef100_Q0RNI8 Pseudouridine synthase n=1 Tax=Frankia alni ACN...   110   1e-22 
UniRef100_B0RHF4 Pseudouridine synthase n=1 Tax=Clavibacter mich...   110   1e-22 
UniRef100_A1JPU4 Pseudouridine synthase n=1 Tax=Yersinia enteroc...   110   1e-22 
UniRef100_Q3DKJ8 Pseudouridine synthase n=2 Tax=Streptococcus ag...   110   1e-22 
UniRef100_Q71X87 Pseudouridine synthase n=3 Tax=Listeria monocyt...   110   1e-22 
UniRef100_B3KHK0 Pseudouridine synthase n=1 Tax=Geobacillus sp. ...   110   1e-22 
UniRef100_B0P8B4 Pseudouridine synthase n=1 Tax=Anaerotruncus co...   110   1e-22 
UniRef100_Q30U38 Pseudouridine synthase n=1 Tax=Sulfurimonas den...   110   2e-22 
UniRef100_Q15Q67 Pseudouridine synthase n=1 Tax=Pseudoalteromona...   110   2e-22 
UniRef100_A2SHF2 Putative arginine/proline rich protein n=1 Tax=...   110   2e-22 
UniRef100_C2KJ46 Ribosomal large subunit pseudouridine synthase ...   110   2e-22 
UniRef100_C0D0J6 Putative uncharacterized protein n=1 Tax=Clostr...   110   2e-22 
UniRef100_B1R099 Pseudouridine synthase n=1 Tax=Clostridium buty...   110   2e-22 
UniRef100_A3Y9I7 Pseudouridine synthase n=1 Tax=Marinomonas sp. ...   110   2e-22 
UniRef100_Q5M3C7 Pseudouridine synthase n=1 Tax=Streptococcus th...   110   2e-22 
UniRef100_Q5LYR3 Pseudouridine synthase n=1 Tax=Streptococcus th...   110   2e-22 
UniRef100_B8JA82 Pseudouridine synthase n=1 Tax=Anaeromyxobacter...   110   2e-22 
UniRef100_B1JKR5 Pseudouridine synthase n=3 Tax=Yersinia pseudot...   110   2e-22 
UniRef100_A8F606 RNA-binding S4 domain protein n=1 Tax=Thermotog...   110   2e-22 
UniRef100_A7HC79 Pseudouridine synthase n=1 Tax=Anaeromyxobacter...   110   2e-22 
UniRef100_C3WU97 Ribosomal small subunit pseudouridine synthase ...   110   2e-22 
UniRef100_C2H7P2 Pseudouridylate synthase n=1 Tax=Enterococcus f...   110   2e-22 
UniRef100_Q6GFU8 Pseudouridine synthase n=3 Tax=Staphylococcus a...   110   2e-22 
UniRef100_A4TJ60 Pseudouridine synthase n=10 Tax=Yersinia pestis...   110   2e-22 
UniRef100_A6F783 Pseudouridine synthase n=1 Tax=Moritella sp. PE...   110   2e-22 
UniRef100_A3U4S5 Putative ribosomal large subunit pseudouridine ...   110   2e-22 
UniRef100_Q8ZEG0 Ribosomal large subunit pseudouridine synthase ...   110   2e-22 
UniRef100_Q9CMY9 Ribosomal large subunit pseudouridine synthase ...   110   2e-22 
UniRef100_Q4JVW6 Pseudouridine synthase n=1 Tax=Corynebacterium ...   109   3e-22 
UniRef100_Q2YTI3 Pseudouridine synthase n=1 Tax=Staphylococcus a...   109   3e-22 
UniRef100_A0Q2Q6 Pseudouridine synthase n=1 Tax=Clostridium novy...   109   3e-22 
UniRef100_C0EY48 Putative uncharacterized protein n=1 Tax=Eubact...   109   3e-22 
UniRef100_UPI0000F3FCF1 hypothetical protein LmonF1_04688 n=1 Ta...   109   3e-22 
UniRef100_Q65FZ9 Pseudouridine synthase n=1 Tax=Bacillus licheni...   109   3e-22 
UniRef100_Q2IIH6 Pseudouridine synthase n=1 Tax=Anaeromyxobacter...   109   3e-22 
UniRef100_A5CSG9 Pseudouridine synthase n=1 Tax=Clavibacter mich...   109   3e-22 
UniRef100_A1W572 Pseudouridine synthase n=1 Tax=Acidovorax sp. J...   109   3e-22 
UniRef100_A5ITS5 Pseudouridine synthase n=11 Tax=Staphylococcus ...   109   3e-22 
UniRef100_Q3XXW5 Pseudouridine synthase n=1 Tax=Enterococcus fae...   109   3e-22 
UniRef100_C2KV26 Pseudouridylate synthase n=1 Tax=Oribacterium s...   109   3e-22 
UniRef100_C2HA64 Pseudouridylate synthase n=1 Tax=Enterococcus f...   109   3e-22 
UniRef100_A7B4J6 Pseudouridine synthase n=1 Tax=Ruminococcus gna...   109   3e-22 
UniRef100_A5TW76 Pseudouridine synthase n=1 Tax=Fusobacterium nu...   109   3e-22 
UniRef100_P65842 Uncharacterized RNA pseudouridine synthase Rv17...   109   3e-22 
UniRef100_UPI000169462F pseudouridine synthase n=1 Tax=Paenibaci...   108   4e-22 
UniRef100_C0QV84 Pseudouridine synthase n=1 Tax=Brachyspira hyod...   108   4e-22 
UniRef100_A4XKD5 Pseudouridine synthase n=1 Tax=Caldicellulosiru...   108   4e-22 
UniRef100_Q1ZKT0 Pseudouridine synthase n=1 Tax=Vibrio angustum ...   108   4e-22 
UniRef100_B8KQJ7 Pseudouridine synthase n=1 Tax=gamma proteobact...   108   4e-22 
UniRef100_B4X1R8 Putative uncharacterized protein n=1 Tax=Alcani...   108   4e-22 
UniRef100_Q2Y7X1 Pseudouridine synthase n=1 Tax=Nitrosospira mul...   108   6e-22 
UniRef100_B8ZRI1 Pseudouridine synthase n=1 Tax=Mycobacterium le...   108   6e-22 
UniRef100_B8DF32 Pseudouridine synthase n=1 Tax=Listeria monocyt...   108   6e-22 
UniRef100_B0TKW9 Pseudouridine synthase n=1 Tax=Shewanella halif...   108   6e-22 
UniRef100_A5CX60 Pseudouridine synthase n=1 Tax=Candidatus Vesic...   108   6e-22 
UniRef100_A0JV58 Pseudouridine synthase n=1 Tax=Arthrobacter sp....   108   6e-22 
UniRef100_Q3D410 Pseudouridine synthase n=2 Tax=Streptococcus ag...   108   6e-22 
UniRef100_Q2C3S2 Pseudouridine synthase n=1 Tax=Photobacterium s...   108   6e-22 
UniRef100_C2E2B8 Pseudouridylate synthase n=1 Tax=Lactobacillus ...   108   6e-22 
UniRef100_C0W1H9 Pseudouridylate synthase n=1 Tax=Actinomyces co...   108   6e-22 
UniRef100_A3XK37 Putative ribosomal large subunit pseudouridine ...   108   6e-22 
UniRef100_O05668 Uncharacterized RNA pseudouridine synthase ML13...   108   6e-22 
UniRef100_UPI0001A43B37 ribosomal large subunit pseudouridine sy...   108   8e-22 
UniRef100_Q0A9P6 Pseudouridine synthase n=1 Tax=Alkalilimnicola ...   108   8e-22 
UniRef100_Q01Z61 Pseudouridine synthase n=1 Tax=Solibacter usita...   108   8e-22 
UniRef100_B1K0L7 Pseudouridine synthase n=1 Tax=Burkholderia cen...   108   8e-22 
UniRef100_A9R989 Pseudouridine synthase n=1 Tax=Yersinia pestis ...   108   8e-22 
UniRef100_A0K6X2 Pseudouridine synthase n=2 Tax=Burkholderia cen...   108   8e-22 
UniRef100_C0UKD8 Ribosomal large subunit pseudouridine synthase ...   108   8e-22 
UniRef100_A3I8W8 Pseudouridine synthase n=1 Tax=Bacillus sp. B14...   108   8e-22 
UniRef100_B9MFX1 Pseudouridine synthase n=1 Tax=Diaphorobacter s...   107   1e-21 
UniRef100_A9BMV8 Pseudouridine synthase n=1 Tax=Delftia acidovor...   107   1e-21 
UniRef100_A1K7C2 Pseudouridine synthase n=1 Tax=Azoarcus sp. BH7...   107   1e-21 
UniRef100_C0ZH81 Pseudouridine synthase n=1 Tax=Brevibacillus br...   107   1e-21 
UniRef100_B0N784 Pseudouridine synthase n=1 Tax=Clostridium ramo...   107   1e-21 
UniRef100_Q5HNF7 Pseudouridine synthase n=2 Tax=Staphylococcus e...   107   1e-21 
UniRef100_Q12LG0 Pseudouridine synthase n=1 Tax=Shewanella denit...   107   1e-21 
UniRef100_B3PMD0 Pseudouridine synthase n=1 Tax=Mycoplasma arthr...   107   1e-21 
UniRef100_B1ZUH4 Pseudouridine synthase n=1 Tax=Opitutus terrae ...   107   1e-21 
UniRef100_A9WRN5 Pseudouridine synthase n=1 Tax=Renibacterium sa...   107   1e-21 
UniRef100_A8H336 Pseudouridine synthase n=1 Tax=Shewanella peale...   107   1e-21 
UniRef100_A5UIW3 Pseudouridine synthase n=1 Tax=Haemophilus infl...   107   1e-21 
UniRef100_Q3Y3H7 Pseudouridine synthase n=1 Tax=Enterococcus fae...   107   1e-21 
UniRef100_B7X1G0 Pseudouridine synthase n=1 Tax=Comamonas testos...   107   1e-21 
UniRef100_A4NA66 Pseudouridine synthase n=1 Tax=Haemophilus infl...   107   1e-21 
UniRef100_UPI0001A4B3F8 hypothetical protein bglu_1g20050 n=1 Ta...   107   2e-21 
UniRef100_UPI0001A47F8D putative pseudouridylate synthase n=1 Ta...   107   2e-21 
UniRef100_Q39H33 Pseudouridine synthase n=1 Tax=Burkholderia sp....   107   2e-21 
UniRef100_Q04F57 Pseudouridine synthase n=1 Tax=Oenococcus oeni ...   107   2e-21 
UniRef100_Q03JJ6 Pseudouridine synthase n=1 Tax=Streptococcus th...   107   2e-21 
UniRef100_B8CLN6 Pseudouridine synthase n=1 Tax=Shewanella piezo...   107   2e-21 
UniRef100_B7GK58 Pseudouridine synthase n=1 Tax=Anoxybacillus fl...   107   2e-21 
UniRef100_B4E7K8 Pseudouridine synthase n=1 Tax=Burkholderia cen...   107   2e-21 
UniRef100_B1XJP9 Pseudouridine synthase n=1 Tax=Synechococcus sp...   107   2e-21 
UniRef100_A3D621 Pseudouridine synthase n=2 Tax=Shewanella balti...   107   2e-21 
UniRef100_A1VNE9 Pseudouridine synthase n=1 Tax=Polaromonas naph...   107   2e-21 
UniRef100_C1DA59 Pseudouridine synthase n=1 Tax=Laribacter hongk...   107   2e-21 
UniRef100_B9YBA5 Putative uncharacterized protein n=1 Tax=Holdem...   107   2e-21 
UniRef100_B5JWQ4 Pseudouridine synthase n=1 Tax=gamma proteobact...   107   2e-21 
UniRef100_A5ZNF6 Pseudouridine synthase n=1 Tax=Ruminococcus obe...   107   2e-21 
UniRef100_UPI00016AECE4 RNA pseudouridylate synthase family prot...   106   2e-21 
UniRef100_Q97FQ2 Pseudouridine synthase n=1 Tax=Clostridium acet...   106   2e-21 
UniRef100_Q47YC7 Ribosomal large subunit pseudouridine synthase ...   106   2e-21 
UniRef100_Q2NT45 Pseudouridine synthase n=1 Tax=Sodalis glossini...   106   2e-21 
UniRef100_B8HGG0 Pseudouridine synthase n=1 Tax=Arthrobacter chl...   106   2e-21 
UniRef100_A6WPW2 Pseudouridine synthase n=2 Tax=Shewanella balti...   106   2e-21 
UniRef100_A4WAZ6 Pseudouridine synthase n=1 Tax=Enterobacter sp....   106   2e-21 
UniRef100_C0V6L2 Pseudouridine synthase family protein n=1 Tax=X...   106   2e-21 
UniRef100_B9WWZ3 Pseudouridine synthase n=1 Tax=Streptococcus su...   106   2e-21 
UniRef100_B7VGU0 Pseudouridine synthase n=2 Tax=Vibrio splendidu...   106   2e-21 
UniRef100_Q87NB7 Ribosomal large subunit pseudouridine synthase ...   106   2e-21 
UniRef100_UPI00016A8B9E RNA pseudouridylate synthase family prot...   106   3e-21 
UniRef100_UPI00016A4B47 RNA pseudouridylate synthase family prot...   106   3e-21 
UniRef100_Q2SVG5 Pseudouridine synthase n=1 Tax=Burkholderia tha...   106   3e-21 
UniRef100_Q21W23 Pseudouridine synthase n=1 Tax=Rhodoferax ferri...   106   3e-21 
UniRef100_Q12AB3 Pseudouridine synthase n=1 Tax=Polaromonas sp. ...   106   3e-21 
UniRef100_Q0HK72 Pseudouridine synthase n=2 Tax=Shewanella RepID...   106   3e-21 
UniRef100_Q0AIG2 Pseudouridine synthase n=1 Tax=Nitrosomonas eut...   106   3e-21 
UniRef100_A4JDW8 Pseudouridine synthase n=1 Tax=Burkholderia vie...   106   3e-21 
UniRef100_A2RP35 Pseudouridine synthase n=1 Tax=Lactococcus lact...   106   3e-21 
UniRef100_A0AL30 Pseudouridine synthase n=1 Tax=Listeria welshim...   106   3e-21 
UniRef100_C2GHD4 Pseudouridine synthase B n=1 Tax=Corynebacteriu...   106   3e-21 
UniRef100_C1QDI4 Pseudouridine synthase family protein n=1 Tax=B...   106   3e-21 
UniRef100_B7RXN3 Pseudouridine synthase n=1 Tax=marine gamma pro...   106   3e-21 
UniRef100_B5CLT6 Pseudouridine synthase n=1 Tax=Ruminococcus lac...   106   3e-21 
UniRef100_B1DFI6 Pseudouridine synthase n=1 Tax=Paenibacillus sp...   106   3e-21 
UniRef100_A6DUZ8 Pseudouridine synthase n=1 Tax=Roseovarius sp. ...   106   3e-21 
UniRef100_A4LQD7 Pseudouridine synthase n=1 Tax=Burkholderia pse...   106   3e-21 
UniRef100_UPI00016AE7FB RNA pseudouridine synthase family protei...   105   4e-21 
UniRef100_UPI00016AC18A RNA pseudouridine synthase family protei...   105   4e-21 
UniRef100_UPI00016AA9B6 RNA pseudouridine synthase family protei...   105   4e-21 
UniRef100_UPI00016AA649 RNA pseudouridine synthase family protei...   105   4e-21 
UniRef100_UPI00016A9983 RNA pseudouridine synthase family protei...   105   4e-21 
UniRef100_Q47QM5 Pseudouridine synthase n=1 Tax=Thermobifida fus...   105   4e-21 
UniRef100_Q3JSZ2 Pseudouridine synthase n=3 Tax=Burkholderia pse...   105   4e-21 
UniRef100_Q2JW88 Pseudouridine synthase n=1 Tax=Synechococcus sp...   105   4e-21 
UniRef100_B1HXA8 Pseudouridine synthase n=1 Tax=Lysinibacillus s...   105   4e-21 
UniRef100_A6LQA3 Pseudouridine synthase n=1 Tax=Clostridium beij...   105   4e-21 
UniRef100_A0KVE0 Pseudouridine synthase n=1 Tax=Shewanella sp. A...   105   4e-21 
UniRef100_B0U3U3 Pseudouridine synthase n=2 Tax=Xylella fastidio...   105   4e-21 
UniRef100_Q3R8I8 Pseudouridine synthase n=1 Tax=Xylella fastidio...   105   4e-21 
UniRef100_Q2BGK1 Pseudouridine synthase n=1 Tax=Neptuniibacter c...   105   4e-21 
UniRef100_Q1YRS8 Pseudouridine synthase n=1 Tax=gamma proteobact...   105   4e-21 
UniRef100_C0YEQ6 RNA pseudouridine synthase family protein n=1 T...   105   4e-21 
UniRef100_C0BTK3 Putative uncharacterized protein n=1 Tax=Bifido...   105   4e-21 
UniRef100_B5H2A5 Pseudouridine synthase n=1 Tax=Streptomyces cla...   105   4e-21 
UniRef100_A3N8V5 Pseudouridine synthase n=4 Tax=Burkholderia pse...   105   4e-21 
UniRef100_A3NUK7 Pseudouridine synthase n=2 Tax=Burkholderia pse...   105   4e-21 
UniRef100_B7G3Y8 Predicted protein (Fragment) n=1 Tax=Phaeodacty...   105   4e-21 
UniRef100_UPI00016A36BF pseudouridine synthase n=1 Tax=Burkholde...   105   5e-21 
UniRef100_Q7M7Z8 Pseudouridine synthase n=1 Tax=Wolinella succin...   105   5e-21 
UniRef100_Q65VL2 Pseudouridine synthase n=1 Tax=Mannheimia succi...   105   5e-21 
UniRef100_Q4QLA0 Pseudouridine synthase n=1 Tax=Haemophilus infl...   105   5e-21 
UniRef100_A4W414 Pseudouridine synthase n=1 Tax=Streptococcus su...   105   5e-21 
UniRef100_Q3D6N6 Pseudouridine synthase n=1 Tax=Streptococcus ag...   105   5e-21 
UniRef100_C2CVY3 Ribosomal large subunit pseudouridine synthase ...   105   5e-21 
UniRef100_C1X6L5 Pseudouridine synthase family protein n=1 Tax=K...   105   5e-21 
UniRef100_B9BMW5 Pseudouridine synthase n=2 Tax=Burkholderia mul...   105   5e-21 
UniRef100_B1B8Z5 Pseudouridine synthase n=1 Tax=Clostridium botu...   105   5e-21 
UniRef100_B0QTD5 Pseudouridine synthase n=1 Tax=Haemophilus para...   105   5e-21 
UniRef100_A7JTA3 Pseudouridine synthase n=1 Tax=Mannheimia haemo...   105   5e-21 
UniRef100_A4NSN1 Pseudouridine synthase n=1 Tax=Haemophilus infl...   105   5e-21 
UniRef100_A4NFW1 Pseudouridine synthase n=1 Tax=Haemophilus infl...   105   5e-21 
UniRef100_A4N536 Pseudouridine synthase n=1 Tax=Haemophilus infl...   105   5e-21 
UniRef100_A4AHP8 Pseudouridine synthase n=1 Tax=marine actinobac...   105   5e-21 
UniRef100_A0NV51 Pseudouridine synthase n=1 Tax=Labrenzia aggreg...   105   5e-21 
UniRef100_A0NJA7 Pseudouridine synthase n=1 Tax=Oenococcus oeni ...   105   5e-21 
UniRef100_Q87BI2 Ribosomal large subunit pseudouridine synthase ...   105   5e-21 
UniRef100_Q9PAP2 Ribosomal large subunit pseudouridine synthase ...   105   5e-21 
UniRef100_UPI00005587BB COG1187: 16S rRNA uridine-516 pseudourid...   105   6e-21 
UniRef100_Q62KK6 Pseudouridine synthase n=1 Tax=Burkholderia mal...   105   6e-21 
UniRef100_Q2RHP4 Pseudouridine synthase n=1 Tax=Moorella thermoa...   105   6e-21 
UniRef100_Q0BFY6 Pseudouridine synthase n=1 Tax=Burkholderia amb...   105   6e-21 
UniRef100_B3R1E7 Pseudouridine synthase n=1 Tax=Cupriavidus taiw...   105   6e-21 
UniRef100_B2SGH8 Pseudouridine synthase n=1 Tax=Francisella tula...   105   6e-21 
UniRef100_B1YP33 Pseudouridine synthase n=1 Tax=Burkholderia amb...   105   6e-21 
UniRef100_B1XXL8 Pseudouridine synthase n=1 Tax=Leptothrix cholo...   105   6e-21 
UniRef100_B1VAZ3 Pseudouridine synthase n=1 Tax=Candidatus Phyto...   105   6e-21 
UniRef100_B0K7Z1 Pseudouridine synthase n=1 Tax=Thermoanaerobact...   105   6e-21 
UniRef100_B0K2D8 Pseudouridine synthase n=1 Tax=Thermoanaerobact...   105   6e-21 
UniRef100_A8KY60 Pseudouridine synthase n=1 Tax=Frankia sp. EAN1...   105   6e-21 
UniRef100_A3DK77 Pseudouridine synthase n=1 Tax=Clostridium ther...   105   6e-21 
UniRef100_C3WE72 Ribosomal small subunit pseudouridine synthase ...   105   6e-21 
UniRef100_C0VMC9 16S rRNA uridine-516 pseudouridylate synthase n...   105   6e-21 
UniRef100_B8L9E5 Pseudouridylate synthase n=1 Tax=Stenotrophomon...   105   6e-21 
UniRef100_B1T1I0 Pseudouridine synthase n=1 Tax=Burkholderia amb...   105   6e-21 
UniRef100_B1FGF3 Pseudouridine synthase n=1 Tax=Burkholderia amb...   105   6e-21 
UniRef100_A1V3N7 Pseudouridine synthase n=6 Tax=Burkholderia mal...   105   6e-21 
UniRef100_A1RIF2 Pseudouridine synthase n=3 Tax=Shewanella RepID...   105   6e-21 
UniRef100_P45104 Ribosomal large subunit pseudouridine synthase ...   105   6e-21 
UniRef100_Q6FDU7 Pseudouridine synthase n=1 Tax=Acinetobacter sp...   104   8e-21 
UniRef100_A9ABD8 Pseudouridine synthase n=1 Tax=Burkholderia mul...   104   8e-21 
UniRef100_A6WCP5 Pseudouridine synthase n=1 Tax=Kineococcus radi...   104   8e-21 
UniRef100_A4FKA2 Pseudouridine synthase n=1 Tax=Saccharopolyspor...   104   8e-21 
UniRef100_A1UH59 Pseudouridine synthase n=3 Tax=Mycobacterium Re...   104   8e-21 
UniRef100_Q0FM70 Pseudouridine synthase n=1 Tax=Roseovarius sp. ...   104   8e-21 
UniRef100_B9ZS86 RNA-binding S4 domain protein n=1 Tax=Thioalkal...   104   8e-21 
UniRef100_B9BE35 Pseudouridine synthase n=1 Tax=Burkholderia mul...   104   8e-21 
UniRef100_A8SYF2 Pseudouridine synthase n=1 Tax=Coprococcus euta...   104   8e-21 
UniRef100_C1FHS6 Predicted protein (Fragment) n=1 Tax=Micromonas...   104   8e-21 
UniRef100_UPI0000E87F68 pseudouridylate synthase n=1 Tax=Methylo...   104   1e-20 
UniRef100_UPI000050FCB0 COG1187: 16S rRNA uridine-516 pseudourid...   104   1e-20 
UniRef100_UPI000045EA2C COG1187: 16S rRNA uridine-516 pseudourid...   104   1e-20 
UniRef100_Q6AGF9 Pseudouridine synthase n=1 Tax=Leifsonia xyli s...   104   1e-20 
UniRef100_Q3MGA4 Pseudouridine synthase n=1 Tax=Anabaena variabi...   104   1e-20 
UniRef100_Q0I2P2 Pseudouridine synthase n=1 Tax=Haemophilus somn...   104   1e-20 
UniRef100_Q084M6 Ribosomal large subunit pseudouridine synthase ...   104   1e-20 
UniRef100_Q02VP9 Pseudouridine synthase n=1 Tax=Lactococcus lact...   104   1e-20 
UniRef100_B2HUK5 Pseudouridine synthase n=1 Tax=Acinetobacter ba...   104   1e-20 
UniRef100_A5UCR1 Pseudouridine synthase n=1 Tax=Haemophilus infl...   104   1e-20 
UniRef100_A3M2V4 Pseudouridine synthase n=5 Tax=Acinetobacter ba...   104   1e-20 
UniRef100_Q2B672 Pseudouridine synthase n=1 Tax=Bacillus sp. NRR...   104   1e-20 
UniRef100_C2U3U7 Pseudouridine synthase n=3 Tax=Bacillus cereus ...   104   1e-20 
UniRef100_C1VZM9 Pseudouridine synthase family protein n=1 Tax=J...   104   1e-20 
UniRef100_B5I0J9 Pseudouridine synthase (Fragment) n=1 Tax=Strep...   104   1e-20 
UniRef100_A7JHT8 Pseudouridine synthase n=2 Tax=Francisella novi...   104   1e-20 
UniRef100_A0Q6G8 Pseudouridine synthase n=5 Tax=Francisella RepI...   104   1e-20 
UniRef100_A5L875 Pseudouridine synthase n=1 Tax=Vibrionales bact...   104   1e-20 
UniRef100_A0YDS3 Pseudouridine synthase n=1 Tax=marine gamma pro...   104   1e-20 
UniRef100_UPI00018A07DF hypothetical protein BIFGAL_01652 n=1 Ta...   103   1e-20 
UniRef100_UPI00016A713D RNA pseudouridylate synthase family prot...   103   1e-20 
UniRef100_UPI00016A4097 RNA pseudouridylate synthase family prot...   103   1e-20 
UniRef100_Q8EP20 Pseudouridine synthase n=1 Tax=Oceanobacillus i...   103   1e-20 
UniRef100_Q67P81 Pseudouridine synthase n=1 Tax=Symbiobacterium ...   103   1e-20 
UniRef100_Q1LLR3 Pseudouridine synthase n=1 Tax=Ralstonia metall...   103   1e-20 
UniRef100_Q0VPR3 S4 domain protein n=1 Tax=Alcanivorax borkumens...   103   1e-20 
UniRef100_Q0K9B6 Pseudouridine synthase n=1 Tax=Ralstonia eutrop...   103   1e-20 
UniRef100_B2FMA5 Ribosomal large subunit pseudouridine synthase ...   103   1e-20 
UniRef100_B0U085 Pseudouridine synthase n=1 Tax=Francisella phil...   103   1e-20 
UniRef100_Q1V400 Pseudouridine synthase n=1 Tax=Vibrio alginolyt...   103   1e-20 
UniRef100_C2V1U2 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   103   1e-20 
UniRef100_B8K892 Pseudouridine synthase n=1 Tax=Vibrio parahaemo...   103   1e-20 
UniRef100_B6XTE8 Pseudouridine synthase n=1 Tax=Bifidobacterium ...   103   1e-20 
UniRef100_A7K6D8 Pseudouridine synthase n=1 Tax=Vibrio sp. Ex25 ...   103   1e-20 
UniRef100_A4NLG1 Pseudouridine synthase n=1 Tax=Haemophilus infl...   103   1e-20 
UniRef100_UPI0001745D7A Pseudouridine synthase, Rsu n=1 Tax=Verr...   103   2e-20 
UniRef100_Q4UVF6 Pseudouridine synthase n=1 Tax=Xanthomonas camp...   103   2e-20 
UniRef100_Q46ZN8 Pseudouridine synthase n=1 Tax=Ralstonia eutrop...   103   2e-20 
UniRef100_Q1D9N8 Pseudouridine synthase n=1 Tax=Myxococcus xanth...   103   2e-20 
UniRef100_B0RS84 Pseudouridine synthase n=1 Tax=Xanthomonas camp...   103   2e-20 
UniRef100_B0BQA0 Pseudouridine synthase n=1 Tax=Actinobacillus p...   103   2e-20 
UniRef100_A3N1G2 Pseudouridine synthase n=1 Tax=Actinobacillus p...   103   2e-20 
UniRef100_A1TM22 Pseudouridine synthase n=1 Tax=Acidovorax citru...   103   2e-20 
UniRef100_A1R5C3 Pseudouridine synthase n=1 Tax=Arthrobacter aur...   103   2e-20 
UniRef100_A0RJU3 Pseudouridine synthase n=1 Tax=Bacillus thuring...   103   2e-20 
UniRef100_C2Y0H1 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   103   2e-20 
UniRef100_C0CQ93 Putative uncharacterized protein n=1 Tax=Blauti...   103   2e-20 
UniRef100_B4VQX3 Pseudouridine synthase n=1 Tax=Microcoleus chth...   103   2e-20 
UniRef100_A7VSS7 Pseudouridine synthase n=1 Tax=Clostridium lept...   103   2e-20 
UniRef100_Q1RJR2 Uncharacterized RNA pseudouridine synthase RBE_...   103   2e-20 
UniRef100_Q8P8M6 Ribosomal large subunit pseudouridine synthase ...   103   2e-20 
UniRef100_Q89DE4 Pseudouridine synthase n=1 Tax=Bradyrhizobium j...   103   2e-20 
UniRef100_Q7WHF9 Pseudouridine synthase n=1 Tax=Bordetella bronc...   103   2e-20 
UniRef100_Q7W9A8 Pseudouridine synthase n=1 Tax=Bordetella parap...   103   2e-20 
UniRef100_Q7VYR5 Pseudouridine synthase n=1 Tax=Bordetella pertu...   103   2e-20 
UniRef100_Q6YQY5 Pseudouridine synthase n=1 Tax=Onion yellows ph...   103   2e-20 
UniRef100_Q6G8H4 Pseudouridine synthase n=2 Tax=Staphylococcus a...   103   2e-20 
UniRef100_Q04B88 Pseudouridine synthase n=2 Tax=Lactobacillus de...   103   2e-20 
UniRef100_B8F819 Pseudouridine synthase n=1 Tax=Haemophilus para...   103   2e-20 
UniRef100_B3GY47 Pseudouridine synthase n=1 Tax=Actinobacillus p...   103   2e-20 
UniRef100_B1VH07 Pseudouridine synthase n=1 Tax=Corynebacterium ...   103   2e-20 
UniRef100_B0UTT5 Pseudouridine synthase n=1 Tax=Haemophilus somn...   103   2e-20 
UniRef100_A4IY01 Pseudouridine synthase n=1 Tax=Francisella tula...   103   2e-20 
UniRef100_A1WE21 Pseudouridine synthase n=1 Tax=Verminephrobacte...   103   2e-20 
UniRef100_C1Y7W3 Ribosomal large subunit pseudouridine synthase ...   103   2e-20 
UniRef100_C1I9U3 Pseudouridine synthase n=1 Tax=Clostridium sp. ...   103   2e-20 
UniRef100_B6BGB2 RNA pseudouridylate synthase family protein n=1...   103   2e-20 
UniRef100_B8DUD9 Pseudouridine synthase n=2 Tax=Bifidobacterium ...   103   2e-20 
UniRef100_A8T9H0 Pseudouridine synthase n=1 Tax=Vibrio campbelli...   103   2e-20 
UniRef100_A7BCE9 Pseudouridine synthase n=1 Tax=Actinomyces odon...   103   2e-20 
UniRef100_A6NZ18 Pseudouridine synthase n=1 Tax=Bacteroides capi...   103   2e-20 
UniRef100_A6DD18 Pseudouridine synthase n=1 Tax=Caminibacter med...   103   2e-20 
UniRef100_A7MRZ0 Pseudouridine synthase n=2 Tax=Vibrio harveyi R...   103   2e-20 
UniRef100_A4NXX4 Pseudouridine synthase n=1 Tax=Haemophilus infl...   103   2e-20 
UniRef100_A4MVD4 Pseudouridine synthase n=1 Tax=Haemophilus infl...   103   2e-20 
UniRef100_UPI0001909EB9 RNA-pseudouridine synthase protein, ribo...   102   3e-20 
UniRef100_B4SPX1 RNA-binding S4 domain protein n=1 Tax=Stenotrop...   102   3e-20 
UniRef100_Q1ZE33 Pseudouridine synthase n=1 Tax=Psychromonas sp....   102   3e-20 
UniRef100_C3DRI5 Pseudouridine synthase n=2 Tax=Bacillus thuring...   102   3e-20 
UniRef100_C2EED3 Ribosomal small subunit pseudouridine synthase ...   102   3e-20 
UniRef100_C2BZQ3 Pseudouridylate synthase n=1 Tax=Listeria grayi...   102   3e-20 
UniRef100_C0X280 Pseudouridylate synthase n=2 Tax=Enterococcus f...   102   3e-20 
UniRef100_C0TD08 Ribosomal large subunit pseudouridine synthase ...   102   3e-20 
UniRef100_B9CSZ0 Pseudouridine synthase n=1 Tax=Staphylococcus c...   102   3e-20 
UniRef100_B1C1W0 Pseudouridine synthase n=1 Tax=Clostridium spir...   102   3e-20 
UniRef100_A6D575 Pseudouridine synthase n=1 Tax=Vibrio shilonii ...   102   3e-20 
UniRef100_A7NC60 Pseudouridine synthase n=5 Tax=Francisella tula...   102   3e-20 
UniRef100_A3SRI5 Pseudouridine synthase n=1 Tax=Roseovarius nubi...   102   3e-20 
UniRef100_Q7RG54 1st euk. member n=1 Tax=Plasmodium yoelii yoeli...   102   3e-20 
UniRef100_UPI00019768BE pseudouridine synthase n=1 Tax=Bifidobac...   102   4e-20 
UniRef100_Q7ND39 Pseudouridine synthase n=1 Tax=Gloeobacter viol...   102   4e-20 
UniRef100_B7JS81 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   102   4e-20 
UniRef100_B1W211 Pseudouridine synthase n=1 Tax=Streptomyces gri...   102   4e-20 
UniRef100_C2YXT6 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   102   4e-20 
UniRef100_C2QII9 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   102   4e-20 
UniRef100_C2DEQ5 Pseudouridylate synthase n=1 Tax=Enterococcus f...   102   4e-20 
UniRef100_C0DWW7 Putative uncharacterized protein n=1 Tax=Eikene...   102   4e-20 
UniRef100_B7YQS1 Pseudouridine synthase n=1 Tax=Variovorax parad...   102   4e-20 
UniRef100_B1SGB2 Pseudouridine synthase n=1 Tax=Streptococcus in...   102   4e-20 
UniRef100_B1SA95 Pseudouridine synthase n=1 Tax=Bifidobacterium ...   102   4e-20 
UniRef100_Q49YI4 Pseudouridine synthase n=1 Tax=Staphylococcus s...   102   5e-20 
UniRef100_Q03GG2 Pseudouridine synthase n=1 Tax=Pediococcus pent...   102   5e-20 
UniRef100_Q03AT5 Pseudouridine synthase n=1 Tax=Lactobacillus ca...   102   5e-20 
UniRef100_B3WCD7 Pseudouridine synthase n=1 Tax=Lactobacillus ca...   102   5e-20 
UniRef100_A6Q122 Pseudouridine synthase n=1 Tax=Nitratiruptor sp...   102   5e-20 
UniRef100_A0LU98 Pseudouridine synthase n=1 Tax=Acidothermus cel...   102   5e-20 
UniRef100_B7IKX3 Pseudouridine synthase n=5 Tax=Bacillus cereus ...   102   5e-20 
UniRef100_Q632Y4 Pseudouridine synthase n=3 Tax=Bacillus cereus ...   102   5e-20 
UniRef100_C2D7I2 Pseudouridylate synthase n=1 Tax=Atopobium vagi...   102   5e-20 
UniRef100_C1PU41 Ribosomal small subunit pseudouridine synthase ...   102   5e-20 
UniRef100_B7HSP3 Pseudouridine synthase n=8 Tax=Bacillus cereus ...   102   5e-20 
UniRef100_B7H765 Pseudouridine synthase n=15 Tax=Bacillus cereus...   102   5e-20 
UniRef100_C1EVX3 RNA pseudouridine synthase family protein n=21 ...   102   5e-20 
UniRef100_A7LRD4 Pseudouridine synthase n=1 Tax=Bacteroides ovat...   102   5e-20 
UniRef100_A6DMJ6 Pseudouridine synthase n=1 Tax=Lentisphaera ara...   102   5e-20 
UniRef100_A3YBH7 Pseudouridine synthase n=1 Tax=Marinomonas sp. ...   102   5e-20 
UniRef100_A3WNA5 Pseudouridine synthase n=1 Tax=Idiomarina balti...   102   5e-20 
UniRef100_A3RXD2 Pseudouridine synthase n=2 Tax=Ralstonia solana...   102   5e-20 
UniRef100_Q65TR5 Pseudouridine synthase n=1 Tax=Mannheimia succi...   101   7e-20 
UniRef100_Q5F8V3 Pseudouridine synthase n=1 Tax=Neisseria gonorr...   101   7e-20 
UniRef100_Q2RWN9 Pseudouridine synthase n=1 Tax=Rhodospirillum r...   101   7e-20 
UniRef100_Q2K4S3 Pseudouridine synthase n=1 Tax=Rhizobium etli C...   101   7e-20 
UniRef100_B8D7H8 Pseudouridine synthase n=2 Tax=Buchnera aphidic...   101   7e-20 
UniRef100_B3QIH2 Pseudouridine synthase n=1 Tax=Rhodopseudomonas...   101   7e-20 
UniRef100_B2RZJ5 Pseudouridine synthase n=1 Tax=Borrelia hermsii...   101   7e-20 
UniRef100_A7GTX6 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   101   7e-20 
UniRef100_A1ISG2 Pseudouridine synthase n=1 Tax=Neisseria mening...   101   7e-20 
UniRef100_Q0F4X3 Pseudouridine synthase n=1 Tax=Rhodobacterales ...   101   7e-20 
UniRef100_C3ARW0 Pseudouridine synthase n=3 Tax=Bacillus RepID=C...   101   7e-20 
UniRef100_C1Q7S1 Pseudouridine synthase family protein n=1 Tax=A...   101   7e-20 
UniRef100_B4RM91 Pseudouridine synthase n=2 Tax=Neisseria gonorr...   101   7e-20 
UniRef100_B7DR79 Pseudouridine synthase n=1 Tax=Alicyclobacillus...   101   7e-20 
UniRef100_B6FRW2 Pseudouridine synthase n=1 Tax=Clostridium nexi...   101   7e-20 
UniRef100_B5S1F0 Pseudouridine synthase n=1 Tax=Ralstonia solana...   101   7e-20 
UniRef100_B2QF29 Pseudouridine synthase n=1 Tax=Exiguobacterium ...   101   7e-20 
UniRef100_B0A959 Pseudouridine synthase n=1 Tax=Clostridium bart...   101   7e-20 
UniRef100_A3SGQ9 Pseudouridine synthase n=1 Tax=Sulfitobacter sp...   101   7e-20 
UniRef100_Q7N354 Pseudouridine synthase n=1 Tax=Photorhabdus lum...   101   9e-20 
UniRef100_Q6NAL9 Pseudouridine synthase n=1 Tax=Rhodopseudomonas...   101   9e-20 
UniRef100_Q6LPB2 Pseudouridine synthase n=1 Tax=Photobacterium p...   101   9e-20 
UniRef100_B5RLK4 Pseudouridine synthase n=2 Tax=Borrelia RepID=B...   101   9e-20 
UniRef100_C3KMT9 Putative ribosomal pseudouridine synthase B n=1...   101   9e-20 
UniRef100_C2Q234 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   101   9e-20 
UniRef100_C2PLK4 Pseudouridine synthase n=1 Tax=Bacillus cereus ...   101   9e-20 
UniRef100_B3DRY9 Pseudouridine synthase n=3 Tax=Bifidobacterium ...   101   9e-20 
UniRef100_C2AQV1 Ribosomal large subunit pseudouridine synthase ...   101   9e-20 
UniRef100_C0FY58 Putative uncharacterized protein n=1 Tax=Rosebu...   101   9e-20 
UniRef100_A8RBG9 Pseudouridine synthase n=1 Tax=Eubacterium doli...   101   9e-20 
UniRef100_A3W2L8 Pseudouridine synthase n=1 Tax=Roseovarius sp. ...   101   9e-20 
UniRef100_A3T0T0 Pseudouridine synthase n=1 Tax=Sulfitobacter sp...   101   9e-20 
UniRef100_P57369 Ribosomal large subunit pseudouridine synthase ...   101   9e-20 
UniRef100_UPI0001693EA3 pseudouridylate synthase n=1 Tax=Xanthom...   100   1e-19 
UniRef100_Q9S232 Pseudouridine synthase n=1 Tax=Streptomyces coe...   100   1e-19 
UniRef100_Q8YZD2 Pseudouridine synthase n=1 Tax=Nostoc sp. PCC 7...   100   1e-19 
UniRef100_B2SLJ7 Pseudouridine synthase n=3 Tax=Xanthomonas oryz...   100   1e-19 
UniRef100_Q3BSL5 Pseudouridine synthase n=1 Tax=Xanthomonas camp...   100   1e-19 
UniRef100_Q3ABX1 Pseudouridine synthase n=1 Tax=Carboxydothermus...   100   1e-19 
UniRef100_Q1QD62 Pseudouridine synthase n=1 Tax=Psychrobacter cr...   100   1e-19 
UniRef100_B6J6Y2 Pseudouridine synthase n=1 Tax=Coxiella burneti...   100   1e-19 
UniRef100_B3PY68 Pseudouridine synthase n=1 Tax=Rhizobium etli C...   100   1e-19 
UniRef100_B2UZ21 Pseudouridine synthase n=1 Tax=Clostridium botu...   100   1e-19 
UniRef100_A9M008 Pseudouridine synthase n=1 Tax=Neisseria mening...   100   1e-19 
UniRef100_A9KG22 Pseudouridine synthase n=1 Tax=Coxiella burneti...   100   1e-19 
UniRef100_A6TUC4 Pseudouridine synthase n=1 Tax=Alkaliphilus met...   100   1e-19 
UniRef100_A1KUI3 Pseudouridine synthase n=1 Tax=Neisseria mening...   100   1e-19 
UniRef100_A0LG30 Pseudouridine synthase n=1 Tax=Syntrophobacter ...   100   1e-19 
UniRef100_A9VKL6 Pseudouridine synthase n=3 Tax=Bacillus cereus ...   100   1e-19 
UniRef100_C2H0Y4 Pseudouridylate synthase n=1 Tax=Enterococcus f...   100   1e-19 
UniRef100_C0F2V4 Putative uncharacterized protein n=1 Tax=Neisse...   100   1e-19 
UniRef100_C0EB54 Putative uncharacterized protein n=1 Tax=Clostr...   100   1e-19 
UniRef100_C0DPT2 Putative uncharacterized protein n=1 Tax=Neisse...   100   1e-19 
UniRef100_C0DH00 Putative uncharacterized protein n=1 Tax=Neisse...   100   1e-19 
UniRef100_A8U325 Pseudouridine synthase n=1 Tax=alpha proteobact...   100   1e-19 
UniRef100_A4N413 Pseudouridine synthase n=1 Tax=Haemophilus infl...   100   1e-19 
UniRef100_A0YEH5 Pseudouridine synthase n=1 Tax=marine gamma pro...   100   1e-19 
UniRef100_B9HLH3 Predicted protein n=1 Tax=Populus trichocarpa R...   100   1e-19 
UniRef100_Q8PK58 Ribosomal large subunit pseudouridine synthase ...   100   1e-19 
UniRef100_Q828Z9 Pseudouridine synthase n=1 Tax=Streptomyces ave...   100   2e-19 
UniRef100_Q7MM46 Pseudouridine synthase n=1 Tax=Vibrio vulnificu...   100   2e-19 
UniRef100_Q4A5Z2 Pseudouridine synthase n=1 Tax=Mycoplasma synov...   100   2e-19 
UniRef100_Q3IFQ2 Pseudouridine synthase n=1 Tax=Pseudoalteromona...   100   2e-19 
UniRef100_Q2NIZ3 Pseudouridine synthase n=1 Tax=Aster yellows wi...   100   2e-19 
UniRef100_B9KPF2 Pseudouridine synthase n=1 Tax=Rhodobacter spha...   100   2e-19 
UniRef100_B7GR26 Pseudouridine synthase n=1 Tax=Bifidobacterium ...   100   2e-19 
UniRef100_B5ZNG9 Pseudouridine synthase n=1 Tax=Rhizobium legumi...   100   2e-19 
UniRef100_B2TIZ5 Pseudouridine synthase n=1 Tax=Clostridium botu...   100   2e-19 
UniRef100_A7HJ21 Pseudouridine synthase n=1 Tax=Fervidobacterium...   100   2e-19 
UniRef100_A7GVW9 Pseudouridine synthase n=1 Tax=Campylobacter cu...   100   2e-19 
UniRef100_A3QBD9 Pseudouridine synthase n=1 Tax=Shewanella loihi...   100   2e-19 
UniRef100_A3PI85 Pseudouridine synthase n=1 Tax=Rhodobacter spha...   100   2e-19 
UniRef100_Q1Z402 Pseudouridine synthase n=1 Tax=Photobacterium p...   100   2e-19 
UniRef100_C2FH72 Pseudouridylate synthase n=1 Tax=Lactobacillus ...   100   2e-19 
UniRef100_C0BCM8 Putative uncharacterized protein n=1 Tax=Coproc...   100   2e-19 
UniRef100_B0ISR5 Pseudouridine synthase n=1 Tax=Rhizobium legumi...   100   2e-19 
UniRef100_A7VCC1 Pseudouridine synthase n=1 Tax=Clostridium sp. ...   100   2e-19 
UniRef100_C1FD45 Pseudouridylate synthase n=1 Tax=Micromonas sp....   100   2e-19 
UniRef100_Q55578 Uncharacterized RNA pseudouridine synthase slr0...   100   2e-19 
UniRef100_Q8D8C0 Ribosomal large subunit pseudouridine synthase ...   100   2e-19 
UniRef100_B1XV92 Pseudouridine synthase n=1 Tax=Polynucleobacter...   100   2e-19 
UniRef100_A9ITY6 Pseudouridine synthase n=1 Tax=Bordetella petri...   100   2e-19 
UniRef100_A8MMB3 Pseudouridine synthase n=1 Tax=Alkaliphilus ore...   100   2e-19 
UniRef100_C2ZE16 Pseudouridine synthase n=2 Tax=Bacillus cereus ...   100   2e-19 
UniRef100_C0W3E8 Possible pseudouridine synthase Rsu n=1 Tax=Act...   100   2e-19 
UniRef100_C0B171 Putative uncharacterized protein n=1 Tax=Proteu...   100   2e-19 
UniRef100_B9R341 Pseudouridine synthase n=1 Tax=Labrenzia alexan...   100   2e-19 
UniRef100_B7C4I5 Pseudouridine synthase n=1 Tax=Roseburia intest...   100   2e-19 
UniRef100_A4BM37 Pseudouridine synthase n=1 Tax=Nitrococcus mobi...   100   2e-19 
UniRef100_A3YG85 Pseudouridine synthase n=1 Tax=Marinomonas sp. ...   100   2e-19 
UniRef100_UPI0001852DE3 hypothetical protein HpylHP_01046 n=1 Ta...   100   3e-19 
UniRef100_UPI000057C3E7 16S rRNA uridine-516 pseudouridylate syn...   100   3e-19 
UniRef100_Q9K7T6 Pseudouridine synthase n=1 Tax=Bacillus halodur...   100   3e-19 
UniRef100_Q9JYZ4 Pseudouridine synthase n=1 Tax=Neisseria mening...   100   3e-19 
UniRef100_Q98IZ5 Pseudouridine synthase n=1 Tax=Mesorhizobium lo...   100   3e-19 
UniRef100_Q8XZV9 Pseudouridine synthase n=1 Tax=Ralstonia solana...   100   3e-19 
UniRef100_Q4AAX8 Pseudouridine synthase n=1 Tax=Coxiella burneti...   100   3e-19 
UniRef100_B8CQS6 Pseudouridine synthase n=1 Tax=Shewanella piezo...   100   3e-19 
UniRef100_A9NCN1 Pseudouridine synthase n=1 Tax=Coxiella burneti...   100   3e-19 
UniRef100_A4SY81 Pseudouridine synthase n=1 Tax=Polynucleobacter...   100   3e-19 
UniRef100_A2SHC0 Pseudouridine synthase n=1 Tax=Methylibium petr...   100   3e-19 
UniRef100_C2HNN4 16S pseudouridylate synthase n=2 Tax=Lactobacil...   100   3e-19 
UniRef100_C1ZE67 Pseudouridine synthase family protein n=1 Tax=P...   100   3e-19 
UniRef100_C0XAW1 Pseudouridylate synthase n=1 Tax=Lactobacillus ...   100   3e-19 
UniRef100_C0E3H3 Putative uncharacterized protein n=1 Tax=Coryne...   100   3e-19 
UniRef100_B7XUE3 Pseudouridine synthase n=1 Tax=Borrelia garinii...   100   3e-19 
UniRef100_B7XTL6 Pseudouridine synthase n=1 Tax=Borrelia garinii...   100   3e-19 
UniRef100_B7A9J5 Pseudouridine synthase n=1 Tax=Thermus aquaticu...   100   3e-19 
UniRef100_A9ZH66 Pseudouridine synthase n=1 Tax=Coxiella burneti...   100   3e-19 
UniRef100_A3XFD0 Pseudouridine synthase n=1 Tax=Roseobacter sp. ...   100   3e-19 
UniRef100_UPI00019783E6 putative ribosomal pseudouridine synthas...    99   3e-19 
UniRef100_Q9CDI0 Pseudouridine synthase n=1 Tax=Lactococcus lact...    99   3e-19 
UniRef100_Q7VMD1 Pseudouridine synthase n=1 Tax=Haemophilus ducr...    99   3e-19 
UniRef100_Q662N2 Pseudouridine synthase n=1 Tax=Borrelia garinii...    99   3e-19 
UniRef100_Q2JD11 Pseudouridine synthase n=1 Tax=Frankia sp. CcI3...    99   3e-19 
UniRef100_C0GX60 Pseudouridine synthase n=1 Tax=Halothiobacillus...    99   3e-19 
UniRef100_B7RIZ3 Pseudouridine synthase n=1 Tax=Roseobacter sp. ...    99   3e-19 
UniRef100_A8SIK9 Pseudouridine synthase n=1 Tax=Parvimonas micra...    99   3e-19 
UniRef100_A8RUB6 Pseudouridine synthase n=1 Tax=Clostridium bolt...    99   3e-19 
UniRef100_A3TKV7 Pseudouridine synthase n=1 Tax=Janibacter sp. H...    99   3e-19 
UniRef100_Q4FU03 Pseudouridine synthase n=1 Tax=Psychrobacter ar...    99   5e-19 
UniRef100_Q2KXY3 Pseudouridine synthase n=1 Tax=Bordetella avium...    99   5e-19 
UniRef100_Q1WUT0 Pseudouridine synthase n=1 Tax=Lactobacillus sa...    99   5e-19 
UniRef100_Q1YVV7 Pseudouridine synthase (Fragment) n=1 Tax=Photo...    99   5e-19 
UniRef100_Q1YVK2 Pseudouridine synthase n=1 Tax=gamma proteobact...    99   5e-19 
UniRef100_B4ET95 Pseudouridine synthase n=2 Tax=Proteus mirabili...    99   5e-19 
UniRef100_A5KLG0 Pseudouridine synthase n=1 Tax=Ruminococcus tor...    99   5e-19 
UniRef100_A0ZG19 Pseudouridine synthase n=1 Tax=Nodularia spumig...    99   5e-19 
UniRef100_UPI000197902A putative ribosomal pseudouridine synthas...    99   6e-19 
UniRef100_Q92XD5 Pseudouridine synthase n=1 Tax=Sinorhizobium me...    99   6e-19 
UniRef100_Q891H6 Pseudouridine synthase n=1 Tax=Clostridium teta...    99   6e-19 
UniRef100_B6J038 Pseudouridine synthase n=1 Tax=Coxiella burneti...    99   6e-19 
UniRef100_B4U207 Pseudouridine synthase n=3 Tax=root RepID=B4U20...    99   6e-19 
UniRef100_A7GIK9 Pseudouridine synthase n=2 Tax=Clostridium botu...    99   6e-19 
UniRef100_A1WUK5 Pseudouridine synthase n=1 Tax=Halorhodospira h...    99   6e-19 
UniRef100_C1TRI8 Pseudouridine synthase family protein n=1 Tax=D...    99   6e-19 
UniRef100_B6BUN1 Ribosomal large subunit pseudouridine synthase ...    99   6e-19 
UniRef100_A4ECD6 Pseudouridine synthase n=1 Tax=Collinsella aero...    99   6e-19 
UniRef100_Q3J464 Pseudouridine synthase n=1 Tax=Rhodobacter spha...    98   8e-19 
UniRef100_Q2N9M6 Pseudouridine synthase n=1 Tax=Erythrobacter li...    98   8e-19 
UniRef100_B4U3Q9 Pseudouridine synthase n=1 Tax=Streptococcus eq...    98   8e-19 
UniRef100_B2V6W2 Pseudouridine synthase n=1 Tax=Sulfurihydrogeni...    98   8e-19 
UniRef100_A7I421 Pseudouridine synthase n=1 Tax=Campylobacter ho...    98   8e-19 
UniRef100_A2RE22 Pseudouridine synthase n=5 Tax=Streptococcus py...    98   8e-19 
UniRef100_A0RRT3 Pseudouridine synthase n=1 Tax=Campylobacter fe...    98   8e-19 
UniRef100_Q1J642 Pseudouridine synthase n=5 Tax=Streptococcus py...    98   8e-19 
UniRef100_C0TZK6 Ribosomal large subunit pseudouridine synthase ...    98   8e-19 
UniRef100_C0BJ48 RNA-binding S4 domain protein n=1 Tax=Flavobact...    98   8e-19 
UniRef100_C0AQ41 Hypothetical RNA pseudouridine synthase n=1 Tax...    98   8e-19 
UniRef100_B7C8E2 Pseudouridine synthase n=1 Tax=Eubacterium bifo...    98   8e-19 
UniRef100_B6GBX5 Pseudouridine synthase n=1 Tax=Collinsella ster...    98   8e-19 
UniRef100_C3KUA4 RNA pseudouridine synthase family protein n=2 T...    98   8e-19 
UniRef100_P55986 Uncharacterized RNA pseudouridine synthase HP_1...    98   8e-19 
UniRef100_UPI00019691C0 hypothetical protein BACCELL_01078 n=1 T...    98   1e-18 
UniRef100_Q983N1 Pseudouridine synthase n=1 Tax=Mesorhizobium lo...    98   1e-18 
UniRef100_Q5QX77 Pseudouridine synthase n=1 Tax=Idiomarina loihi...    98   1e-18 
UniRef100_B7IHL3 RNA pseudouridine synthase family protein n=1 T...    98   1e-18 
UniRef100_A1S7H3 Pseudouridine synthase n=1 Tax=Shewanella amazo...    98   1e-18 
UniRef100_Q14P18 Pseudouridine synthase n=1 Tax=Spiroplasma citr...    98   1e-18 
UniRef100_C2WDA5 Pseudouridine synthase n=1 Tax=Bacillus cereus ...    98   1e-18 
UniRef100_B5QQH5 Pseudouridine synthase n=1 Tax=Lactobacillus rh...    98   1e-18 
UniRef100_B4YQR3 Pseudouridine synthase n=1 Tax=Candidatus Serra...    98   1e-18 
UniRef100_A7BKQ3 Pseudouridine synthase n=1 Tax=Beggiatoa sp. SS...    98   1e-18 
UniRef100_A3JVK9 Pseudouridine synthase n=1 Tax=Rhodobacterales ...    98   1e-18 
UniRef100_Q4Z2R8 Pseudouridine synthetase, putative n=1 Tax=Plas...    98   1e-18 
UniRef100_UPI00017945AA hypothetical protein CLOSPO_00326 n=1 Ta...    97   1e-18 
UniRef100_Q47D91 Pseudouridine synthase n=1 Tax=Dechloromonas ar...    97   1e-18 
UniRef100_Q0SI80 Pseudouridine synthase n=1 Tax=Rhodococcus jost...    97   1e-18 
UniRef100_C0MDB2 Putative ribosomal small subunit pseudouridine ...    97   1e-18 
UniRef100_C0MBS3 Putative ribosomal small subunit pseudouridine ...    97   1e-18 
UniRef100_B9L6I8 Pseudouridine synthase n=1 Tax=Nautilia profund...    97   1e-18 
UniRef100_B5Z978 Pseudouridine synthase n=1 Tax=Helicobacter pyl...    97   1e-18 
UniRef100_B4RA72 Pseudouridine synthase n=1 Tax=Phenylobacterium...    97   1e-18 
UniRef100_B1YKH0 Pseudouridine synthase n=1 Tax=Exiguobacterium ...    97   1e-18 
UniRef100_B0SGV7 Pseudouridylate synthase n=2 Tax=Leptospira bif...    97   1e-18 
UniRef100_A5I700 Pseudouridine synthase n=2 Tax=Clostridium botu...    97   1e-18 
UniRef100_A5ECL6 Pseudouridine synthase n=1 Tax=Bradyrhizobium s...    97   1e-18 
UniRef100_A1QYS9 Ribosomal large subunit pseudouridine synthase ...    97   1e-18 
UniRef100_C1ASX4 Pseudouridine synthase n=1 Tax=Rhodococcus opac...    97   1e-18 
UniRef100_C1A8K5 Pseudouridine synthase n=1 Tax=Gemmatimonas aur...    97   1e-18 
UniRef100_B9CY59 Pseudouridine synthase n=1 Tax=Campylobacter re...    97   1e-18 
UniRef100_A4NKR0 Pseudouridine synthase n=1 Tax=Haemophilus infl...    97   1e-18 
UniRef100_UPI0001A449E3 16S rRNA pseudouridylate synthase A n=1 ...    97   2e-18 
UniRef100_Q0VLG3 Pseudouridine synthase n=1 Tax=Alcanivorax bork...    97   2e-18 
UniRef100_B0S303 Pseudouridine synthase n=1 Tax=Finegoldia magna...    97   2e-18 
UniRef100_A8FYE6 Pseudouridine synthase n=1 Tax=Shewanella sedim...    97   2e-18 
UniRef100_A1W1W2 Pseudouridine synthase n=1 Tax=Campylobacter je...    97   2e-18 
UniRef100_C2JVM1 Pseudouridylate synthase n=1 Tax=Lactobacillus ...    97   2e-18 
UniRef100_B5KAQ5 Pseudouridine synthase n=1 Tax=Octadecabacter a...    97   2e-18 
UniRef100_B0ME90 Pseudouridine synthase n=1 Tax=Anaerostipes cac...    97   2e-18 
UniRef100_A4NSE3 Pseudouridine synthase n=1 Tax=Haemophilus infl...    97   2e-18 
UniRef100_P45124 Ribosomal small subunit pseudouridine synthase ...    97   2e-18 
UniRef100_UPI0001A4539A hypothetical protein NEISUBOT_00354 n=1 ...    97   2e-18 
UniRef100_UPI0000383DCE COG1187: 16S rRNA uridine-516 pseudourid...    97   2e-18 
UniRef100_Q8DV68 Putative 16S pseudouridylate synthase n=1 Tax=S...    97   2e-18 
UniRef100_Q6AQ24 Related to ribosomal large subunit pseudouridin...    97   2e-18 
UniRef100_A6VAP7 Pseudouridine synthase n=1 Tax=Pseudomonas aeru...    97   2e-18 
UniRef100_A4Z0Q7 Pseudouridine synthase n=1 Tax=Bradyrhizobium s...    97   2e-18 
UniRef100_A1B9L2 Pseudouridine synthase n=1 Tax=Paracoccus denit...    97   2e-18 
UniRef100_Q4HEB1 Pseudouridine synthase n=1 Tax=Campylobacter co...    97   2e-18 
UniRef100_C0ENF5 Putative uncharacterized protein n=1 Tax=Neisse...    97   2e-18 
UniRef100_B6B8E0 RNA pseudouridine synthase family protein n=1 T...    97   2e-18 
UniRef100_B0P3L4 Pseudouridine synthase n=1 Tax=Clostridium sp. ...    97   2e-18 
UniRef100_A7CGN0 Pseudouridine synthase n=1 Tax=Ralstonia picket...    97   2e-18 
UniRef100_A4NXJ7 Pseudouridine synthase n=1 Tax=Haemophilus infl...    97   2e-18 
UniRef100_A4MZL5 Pseudouridine synthase n=1 Tax=Haemophilus infl...    97   2e-18 
UniRef100_A4EVL3 Pseudouridine synthase n=1 Tax=Roseobacter sp. ...    97   2e-18 
UniRef100_A3VHQ4 Pseudouridine synthase n=1 Tax=Rhodobacterales ...    97   2e-18 
UniRef100_UPI0001A42F8F 16S rRNA pseudouridylate synthase A n=1 ...    96   3e-18 
UniRef100_Q8P0E1 Pseudouridine synthase n=1 Tax=Streptococcus py...    96   3e-18 
UniRef100_Q5WE78 Pseudouridine synthase n=1 Tax=Bacillus clausii...    96   3e-18 
UniRef100_Q2LSY4 Pseudouridine synthase n=1 Tax=Syntrophus acidi...    96   3e-18 
UniRef100_Q1CR99 Pseudouridine synthase n=1 Tax=Helicobacter pyl...    96   3e-18 
UniRef100_Q17ZE9 Pseudouridine synthase n=1 Tax=Helicobacter aci...    96   3e-18 
UniRef100_Q0C3M6 Pseudouridine synthase n=1 Tax=Hyphomonas neptu...    96   3e-18 
UniRef100_B6IXC3 Pseudouridine synthase n=1 Tax=Rhodospirillum c...    96   3e-18 
UniRef100_B1L1H6 Pseudouridine synthase n=1 Tax=Clostridium botu...    96   3e-18 
UniRef100_A9HEJ7 Pseudouridine synthase n=1 Tax=Gluconacetobacte...    96   3e-18 
UniRef100_A4EIU3 Pseudouridine synthase n=1 Tax=Roseobacter sp. ...    96   3e-18 
UniRef100_A3UFV9 Pseudouridine synthase n=1 Tax=Oceanicaulis ale...    96   3e-18 
UniRef100_A1HLV7 Pseudouridine synthase n=1 Tax=Thermosinus carb...    96   3e-18 
UniRef100_Q2J0X9 Pseudouridine synthase n=1 Tax=Rhodopseudomonas...    96   4e-18 
UniRef100_B8GYA0 Pseudouridine synthase n=2 Tax=Caulobacter vibr...    96   4e-18 
UniRef100_B6JNV7 Pseudouridine synthase n=1 Tax=Helicobacter pyl...    96   4e-18 
UniRef100_A8EYG2 Pseudouridine synthase n=1 Tax=Rickettsia canad...    96   4e-18 
UniRef100_C3XLX0 RNA pseudouridine synthase n=1 Tax=Helicobacter...    96   4e-18 
UniRef100_B6YN19 Pseudouridine synthase n=1 Tax=Thermotogales ba...    96   4e-18 
UniRef100_B4X058 Pseudouridine synthase n=1 Tax=Alcanivorax sp. ...    96   4e-18 
UniRef100_C1FLT1 RNA pseudouridine synthase family protein n=2 T...    96   4e-18 
UniRef100_A5UBQ7 Pseudouridine synthase n=3 Tax=Haemophilus infl...    96   4e-18 
UniRef100_C1N3G7 Pseudouridylate synthase (Fragment) n=1 Tax=Mic...    96   4e-18 
UniRef100_Q9ZJG0 Uncharacterized RNA pseudouridine synthase jhp_...    96   4e-18 
UniRef100_UPI00016B304E hypothetical RNA pseudouridine synthase ...    96   5e-18 
UniRef100_Q1JGD0 Pseudouridine synthase n=1 Tax=Streptococcus py...    96   5e-18 
UniRef100_B8HMJ1 Pseudouridine synthase n=1 Tax=Cyanothece sp. P...    96   5e-18 
UniRef100_B2UVK5 Pseudouridine synthase n=1 Tax=Helicobacter pyl...    96   5e-18 
UniRef100_B2UKZ1 Pseudouridine synthase n=1 Tax=Akkermansia muci...    96   5e-18 
UniRef100_A6VQ06 Pseudouridine synthase n=1 Tax=Actinobacillus s...    96   5e-18 
UniRef100_B9NMQ2 Pseudouridine synthase n=1 Tax=Rhodobacteraceae...    96   5e-18 
UniRef100_A6GNL7 Pseudouridine synthase n=1 Tax=Limnobacter sp. ...    96   5e-18 
UniRef100_UPI000196CC39 hypothetical protein CATMIT_02502 n=1 Ta...    95   7e-18 
UniRef100_Q5HS87 Pseudouridine synthase n=1 Tax=Campylobacter je...    95   7e-18 
UniRef100_Q1MCH2 Pseudouridine synthase n=1 Tax=Rhizobium legumi...    95   7e-18 
UniRef100_Q0SP34 Pseudouridine synthase n=1 Tax=Borrelia afzelii...    95   7e-18 
UniRef100_Q042N1 Pseudouridine synthase n=2 Tax=Lactobacillus ga...    95   7e-18 
UniRef100_Q02HN2 Pseudouridine synthase n=1 Tax=Pseudomonas aeru...    95   7e-18 
UniRef100_B8ETE9 Pseudouridine synthase n=1 Tax=Methylocella sil...    95   7e-18 
UniRef100_B6JIV3 Pseudouridine synthase n=1 Tax=Oligotropha carb...    95   7e-18 
UniRef100_B2VIJ0 Pseudouridine synthase n=1 Tax=Erwinia tasmanie...    95   7e-18 
UniRef100_A8H7F5 Pseudouridine synthase n=1 Tax=Shewanella peale...    95   7e-18 
UniRef100_A7H658 Pseudouridine synthase n=1 Tax=Campylobacter je...    95   7e-18 
UniRef100_A6UGY2 Pseudouridine synthase n=1 Tax=Sinorhizobium me...    95   7e-18 
UniRef100_A5N2Y1 Pseudouridine synthase n=2 Tax=Clostridium kluy...    95   7e-18 
UniRef100_C3JWQ3 Pseudouridine synthase, Rsu (Fragment) n=1 Tax=...    95   7e-18 
UniRef100_C1A029 Putative pseudouridine synthase n=1 Tax=Rhodoco...    95   7e-18 
UniRef100_C0TNV7 Ribosomal large subunit pseudouridine synthase ...    95   7e-18 
UniRef100_B9XV23 Putative uncharacterized protein n=1 Tax=Helico...    95   7e-18 
UniRef100_A8FP23 Pseudouridine synthase n=7 Tax=Campylobacter je...    95   7e-18 
UniRef100_A0YK22 Pseudouridine synthase n=1 Tax=Lyngbya sp. PCC ...    95   7e-18 
UniRef100_Q54RS0 Putative uncharacterized protein n=1 Tax=Dictyo...    95   7e-18 
UniRef100_UPI00016B2B89 hypothetical RNA pseudouridine synthase ...    95   9e-18 
UniRef100_UPI00016B2405 pseudouridine synthase n=1 Tax=candidate...    95   9e-18 
UniRef100_Q48SX4 Pseudouridine synthase n=1 Tax=Streptococcus py...    95   9e-18 
UniRef100_Q13BM8 Pseudouridine synthase n=1 Tax=Rhodopseudomonas...    95   9e-18 
UniRef100_Q0AS26 Pseudouridine synthase n=1 Tax=Maricaulis maris...    95   9e-18 
UniRef100_B5YB87 Pseudouridine synthase n=1 Tax=Dictyoglomus the...    95   9e-18 
UniRef100_B1ZE31 Pseudouridine synthase n=1 Tax=Methylobacterium...    95   9e-18 
UniRef100_B0SBU8 Pseudouridine synthase n=2 Tax=Leptospira bifle...    95   9e-18 
UniRef100_A1U6Q2 Pseudouridine synthase n=1 Tax=Marinobacter aqu...    95   9e-18 
UniRef100_A0KT79 Pseudouridine synthase n=1 Tax=Shewanella sp. A...    95   9e-18 
UniRef100_B9CKE0 Pseudouridine synthase n=1 Tax=Atopobium rimae ...    95   9e-18 
UniRef100_A7PI03 Chromosome chr13 scaffold_17, whole genome shot...    95   9e-18 
UniRef100_Q5XBG5 Pseudouridine synthase n=1 Tax=Streptococcus py...    94   1e-17 
UniRef100_Q11L93 Pseudouridine synthase n=1 Tax=Mesorhizobium sp...    94   1e-17 
UniRef100_B1ZYI5 Pseudouridine synthase n=1 Tax=Opitutus terrae ...    94   1e-17 
UniRef100_A6VM46 Pseudouridine synthase n=1 Tax=Actinobacillus s...    94   1e-17 
UniRef100_A5UF62 Pseudouridine synthase n=1 Tax=Haemophilus infl...    94   1e-17 
UniRef100_C3XG49 Ribosomal large subunit pseudouridine synthase ...    94   1e-17 
UniRef100_C2KBZ7 Pseudouridylate synthase n=1 Tax=Lactobacillus ...    94   1e-17 
UniRef100_A9E1N7 Pseudouridine synthase n=1 Tax=Oceanibulbus ind...    94   1e-17 
UniRef100_A9D5X1 Pseudouridine synthase n=1 Tax=Shewanella benth...    94   1e-17 
UniRef100_A8U4V7 Pseudouridine synthase n=1 Tax=Carnobacterium s...    94   1e-17 
UniRef100_B5JB76 Pseudouridine synthase n=1 Tax=Octadecabacter a...    94   1e-17 
UniRef100_B1SFE4 Pseudouridine synthase n=2 Tax=Streptococcus Re...    94   1e-17 
UniRef100_A8UCR0 Pseudouridine synthase n=1 Tax=Carnobacterium s...    94   1e-17 
UniRef100_A8CXQ7 Pseudouridine synthase n=1 Tax=Dehalococcoides ...    94   1e-17 
UniRef100_UPI00005F905A COG1187: 16S rRNA uridine-516 pseudourid...    94   2e-17 
UniRef100_Q1JG71 Pseudouridine synthase n=1 Tax=Streptococcus py...    94   2e-17 
UniRef100_Q1J5Y8 Pseudouridine synthase n=1 Tax=Streptococcus py...    94   2e-17 
UniRef100_B8DYQ2 Pseudouridine synthase n=1 Tax=Dictyoglomus tur...    94   2e-17 
UniRef100_B7UZ11 Pseudouridine synthase n=1 Tax=Pseudomonas aeru...    94   2e-17 
UniRef100_B5XM44 Pseudouridine synthase n=1 Tax=Streptococcus py...    94   2e-17 
UniRef100_B2UAA0 Pseudouridine synthase n=1 Tax=Ralstonia picket...    94   2e-17 
UniRef100_B2IT08 Pseudouridine synthase n=1 Tax=Nostoc punctifor...    94   2e-17 
UniRef100_A8LJ28 Pseudouridine synthase n=1 Tax=Dinoroseobacter ...    94   2e-17 
UniRef100_A3MZ72 Pseudouridine synthase n=1 Tax=Actinobacillus p...    94   2e-17 
UniRef100_A2RDX7 Pseudouridine synthase n=2 Tax=Streptococcus py...    94   2e-17 
UniRef100_A5KHR7 Pseudouridine synthase n=1 Tax=Campylobacter je...    94   2e-17 
UniRef100_A4TV30 Pseudouridine synthase n=1 Tax=Magnetospirillum...    94   2e-17 
UniRef100_Q016A8 Homology to unknown gene n=1 Tax=Ostreococcus t...    94   2e-17 
UniRef100_UPI0001977627 hypothetical protein HcinC1_02926 n=1 Ta...    93   3e-17 
UniRef100_B9MRL6 Pseudouridine synthase n=1 Tax=Anaerocellum the...    93   3e-17 
UniRef100_B1WWD0 Pseudouridine synthase n=1 Tax=Cyanothece sp. A...    93   3e-17 
UniRef100_B0BTA5 Pseudouridine synthase n=2 Tax=Actinobacillus p...    93   3e-17 
UniRef100_B1TYW1 Pseudouridine synthase n=1 Tax=Micrococcus lute...    93   3e-17 
UniRef100_UPI00005FA8A4 COG1187: 16S rRNA uridine-516 pseudourid...    93   3e-17 
UniRef100_Q6D3K2 Pseudouridine synthase n=1 Tax=Pectobacterium a...    93   3e-17 
UniRef100_Q5YY84 Pseudouridine synthase n=1 Tax=Nocardia farcini...    93   3e-17 
UniRef100_Q1H048 Pseudouridine synthase n=1 Tax=Methylobacillus ...    93   3e-17 
UniRef100_B6EIL9 Pseudouridine synthase n=1 Tax=Aliivibrio salmo...    93   3e-17 
UniRef100_B4SLJ7 Pseudouridine synthase n=1 Tax=Stenotrophomonas...    93   3e-17 
UniRef100_A7ZGB7 Pseudouridine synthase n=1 Tax=Campylobacter co...    93   3e-17 
UniRef100_Q878X6 Pseudouridine synthase n=1 Tax=Streptococcus py...    93   3e-17 
UniRef100_C2E5V1 Pseudouridylate synthase n=1 Tax=Lactobacillus ...    93   3e-17 
UniRef100_C0FH55 Putative uncharacterized protein n=1 Tax=Clostr...    93   3e-17 
UniRef100_B9YJ94 Pseudouridine synthase n=1 Tax='Nostoc azollae'...    93   3e-17 
UniRef100_B6G507 Pseudouridine synthase n=1 Tax=Collinsella inte...    93   3e-17 
UniRef100_B4WFY3 Pseudouridine synthase n=1 Tax=Synechococcus sp...    93   3e-17 
UniRef100_A3V3G8 Pseudouridine synthase n=1 Tax=Loktanella vestf...    93   3e-17 
UniRef100_C1MMY3 Predicted protein n=1 Tax=Micromonas pusilla CC...    93   3e-17 
UniRef100_Q74K01 Pseudouridine synthase n=1 Tax=Lactobacillus jo...    92   4e-17 
UniRef100_Q1GFA6 Pseudouridine synthase n=1 Tax=Ruegeria sp. TM1...    92   4e-17 
UniRef100_Q07T48 Pseudouridine synthase n=1 Tax=Rhodopseudomonas...    92   4e-17 
UniRef100_B7L2Z9 Pseudouridine synthase n=1 Tax=Methylobacterium...    92   4e-17 
UniRef100_B5ES30 Pseudouridine synthase n=2 Tax=Acidithiobacillu...    92   4e-17 
UniRef100_A1JLN5 Pseudouridine synthase n=1 Tax=Yersinia enteroc...    92   4e-17 
UniRef100_B6R892 Pseudouridine synthase n=1 Tax=Pseudovibrio sp....    92   4e-17 
UniRef100_Q8L960 Putative uncharacterized protein n=1 Tax=Arabid...    92   4e-17 
UniRef100_Q9I5J6 Ribosomal small subunit pseudouridine synthase ...    92   4e-17 
UniRef100_Q1JB02 Pseudouridine synthase n=3 Tax=Streptococcus py...    92   6e-17 
UniRef100_Q1GU97 Pseudouridine synthase n=1 Tax=Sphingopyxis ala...    92   6e-17 
UniRef100_Q168J7 Pseudouridine synthase n=1 Tax=Roseobacter deni...    92   6e-17 
UniRef100_Q0BUZ5 Pseudouridine synthase n=1 Tax=Granulibacter be...    92   6e-17 
UniRef100_B2FQN0 Pseudouridine synthase (Fragment) n=1 Tax=Steno...    92   6e-17 
UniRef100_A8GNV3 Pseudouridine synthase n=1 Tax=Rickettsia akari...    92   6e-17 
UniRef100_A8FZ38 Pseudouridine synthase n=1 Tax=Shewanella sedim...    92   6e-17 
UniRef100_A3D0F2 Pseudouridine synthase n=1 Tax=Shewanella balti...    92   6e-17 
UniRef100_A1S9D1 Pseudouridine synthase n=1 Tax=Shewanella amazo...    92   6e-17 
UniRef100_A5P779 Pseudouridine synthase n=1 Tax=Erythrobacter sp...    92   6e-17 
UniRef100_A3L506 Pseudouridine synthase n=2 Tax=Pseudomonas aeru...    92   6e-17 
UniRef100_Q4UL59 Uncharacterized RNA pseudouridine synthase RF_0...    92   6e-17 
UniRef100_Q4QJX0 Pseudouridine synthase n=1 Tax=Haemophilus infl...    92   7e-17 
UniRef100_Q112F3 Pseudouridine synthase n=1 Tax=Trichodesmium er...    92   7e-17 
UniRef100_B9JGX1 Pseudouridine synthase n=1 Tax=Agrobacterium ra...    92   7e-17 
UniRef100_B8I480 Pseudouridine synthase n=1 Tax=Clostridium cell...    92   7e-17 
UniRef100_A9MK29 Pseudouridine synthase n=1 Tax=Salmonella enter...    92   7e-17 
UniRef100_Q8ZGM2 Ribosomal small subunit pseudouridine synthase ...    92   7e-17 
UniRef100_Q2NSN0 Pseudouridine synthase n=1 Tax=Sodalis glossini...    91   1e-16 
UniRef100_Q28T28 Pseudouridine synthase n=1 Tax=Jannaschia sp. C...    91   1e-16 
UniRef100_Q1DBY5 Pseudouridine synthase n=1 Tax=Myxococcus xanth...    91   1e-16 
UniRef100_B8E824 Pseudouridine synthase n=1 Tax=Shewanella balti...    91   1e-16 
UniRef100_B6EKQ1 Pseudouridine synthase n=1 Tax=Aliivibrio salmo...    91   1e-16 
UniRef100_A9L2E3 Pseudouridine synthase n=1 Tax=Shewanella balti...    91   1e-16 
UniRef100_A6WSF9 Pseudouridine synthase n=1 Tax=Shewanella balti...    91   1e-16 
UniRef100_A6VLG1 Pseudouridine synthase n=1 Tax=Actinobacillus s...    91   1e-16 
UniRef100_A4WUQ7 Pseudouridine synthase n=1 Tax=Rhodobacter spha...    91   1e-16 
UniRef100_A0KI55 Pseudouridine synthase n=1 Tax=Aeromonas hydrop...    91   1e-16 
UniRef100_C2FJQ1 Pseudouridylate synthase n=2 Tax=Lactobacillus ...    91   1e-16 
UniRef100_C2EKH0 Pseudouridylate synthase n=2 Tax=Lactobacillus ...    91   1e-16 
UniRef100_B5R192 Pseudouridine synthase n=4 Tax=Salmonella enter...    91   1e-16 
UniRef100_A0CY18 Chromosome undetermined scaffold_30, whole geno...    91   1e-16 
UniRef100_Q2W4E4 Pseudouridine synthase n=1 Tax=Magnetospirillum...    91   1e-16 
UniRef100_Q2P7T1 Ribosomal small subunit pseudouridylate synthas...    91   1e-16 
UniRef100_B3PHG7 Pseudouridine synthase n=1 Tax=Cellvibrio japon...    91   1e-16 
UniRef100_B2SQD7 Ribosomal small subunit pseudouridylate synthas...    91   1e-16 
UniRef100_A4VU21 Pseudouridine synthase n=2 Tax=Streptococcus su...    91   1e-16 
UniRef100_B7AN09 Pseudouridine synthase n=1 Tax=Bacteroides pect...    91   1e-16 
UniRef100_B4B9D6 Pseudouridine synthase n=1 Tax=Clostridium ther...    91   1e-16 
UniRef100_P42395 Ribosomal large subunit pseudouridine synthase ...    91   1e-16 
UniRef100_UPI0001910F61 16S rRNA pseudouridylate synthase A n=3 ...    91   2e-16 
UniRef100_Q8PGD9 Pseudouridine synthase n=1 Tax=Xanthomonas axon...    91   2e-16 
UniRef100_B2IHU4 Pseudouridine synthase n=1 Tax=Beijerinckia ind...    91   2e-16 
UniRef100_B1KDY8 Pseudouridine synthase n=1 Tax=Shewanella woody...    91   2e-16 
UniRef100_B0TR72 Pseudouridine synthase n=1 Tax=Shewanella halif...    91   2e-16 
UniRef100_A8ETT2 Pseudouridine synthase n=1 Tax=Arcobacter butzl...    91   2e-16 
UniRef100_A7N1M7 Pseudouridine synthase n=1 Tax=Vibrio harveyi A...    91   2e-16 
UniRef100_A7FKA5 Pseudouridine synthase n=2 Tax=Yersinia pseudot...    91   2e-16 
UniRef100_B4X087 Pseudouridine synthase n=1 Tax=Alcanivorax sp. ...    91   2e-16 
UniRef100_A8VWN2 Pseudouridine synthase n=1 Tax=Bacillus selenit...    91   2e-16 
UniRef100_A3J8K0 Pseudouridine synthase n=1 Tax=Marinobacter sp....    91   2e-16 
UniRef100_A0XZ85 Pseudouridine synthase n=1 Tax=Alteromonadales ...    91   2e-16 
UniRef100_UPI000196C81A hypothetical protein BRYFOR_02171 n=1 Ta...    90   2e-16 
UniRef100_UPI0000ED8E91 hypothetical protein CdifQ_04000452 n=1 ...    90   2e-16 
UniRef100_UPI00005F74EC COG1187: 16S rRNA uridine-516 pseudourid...    90   2e-16 
UniRef100_B2K9F4 Pseudouridine synthase n=2 Tax=Yersinia pseudot...    90   2e-16 
UniRef100_B0ULR7 Pseudouridine synthase n=1 Tax=Methylobacterium...    90   2e-16 
UniRef100_A4VXR7 Pseudouridine synthase n=1 Tax=Streptococcus su...    90   2e-16 
UniRef100_A4VJ04 Pseudouridine synthase n=1 Tax=Pseudomonas stut...    90   2e-16 
UniRef100_Q0FM68 Pseudouridine synthase n=1 Tax=Roseovarius sp. ...    90   2e-16 
UniRef100_C0SZZ1 Hypothetical RNA pseudouridine synthase n=1 Tax...    90   2e-16 
UniRef100_B7J162 Pseudouridine synthase n=3 Tax=Borrelia burgdor...    90   2e-16 
UniRef100_B9X3T8 Hypothetical RNA pseudouridine synthase n=1 Tax...    90   2e-16 
UniRef100_B9WVQ5 Pseudouridine synthase n=1 Tax=Streptococcus su...    90   2e-16 
UniRef100_A9EKS8 Pseudouridine synthase n=1 Tax=Phaeobacter gall...    90   2e-16 
UniRef100_A9SG51 Predicted protein n=1 Tax=Physcomitrella patens...    90   2e-16 
UniRef100_O51155 Uncharacterized RNA pseudouridine synthase BB_0...    90   2e-16 
UniRef100_UPI00017F41D6 hypothetical RNA pseudouridine synthase ...    90   3e-16 
UniRef100_UPI00005F8212 COG1187: 16S rRNA uridine-516 pseudourid...    90   3e-16 
UniRef100_Q60CV8 Pseudouridine synthase n=1 Tax=Brucella suis Re...    90   3e-16 
UniRef100_Q3IH18 Pseudouridine synthase n=1 Tax=Pseudoalteromona...    90   3e-16 
UniRef100_Q2YJ30 Pseudouridine synthase n=3 Tax=Brucella abortus...    90   3e-16 
UniRef100_A9MDW0 Pseudouridine synthase n=1 Tax=Brucella canis A...    90   3e-16 
UniRef100_C2E7W9 Ribosomal small subunit pseudouridine synthase ...    90   3e-16 
UniRef100_C0X2N9 Pseudouridylate synthase n=1 Tax=Enterococcus f...    90   3e-16 
UniRef100_B5BE14 Pseudouridine synthase n=4 Tax=Salmonella enter...    90   3e-16 
UniRef100_B5C6G3 Pseudouridine synthase n=1 Tax=Salmonella enter...    90   3e-16 
UniRef100_A9G121 Pseudouridine synthase n=1 Tax=Phaeobacter gall...    90   3e-16 
UniRef100_A8T5X0 Pseudouridine synthase n=1 Tax=Vibrio campbelli...    90   3e-16 
UniRef100_A6FPK4 Pseudouridine synthase n=1 Tax=Roseobacter sp. ...    90   3e-16 
UniRef100_A3K8I2 Pseudouridine synthase n=1 Tax=Sagittula stella...    90   3e-16 
UniRef100_P65841 Ribosomal small subunit pseudouridine synthase ...    90   3e-16 
UniRef100_UPI000169DE38 ribosomal large subunit pseudouridine sy...    89   4e-16 
UniRef100_Q8YB61 Pseudouridine synthase n=1 Tax=Brucella meliten...    89   4e-16 
UniRef100_Q2JQ37 Pseudouridine synthase n=1 Tax=Synechococcus sp...    89   4e-16 
UniRef100_Q0HYL7 Pseudouridine synthase n=1 Tax=Shewanella sp. M...    89   4e-16 
UniRef100_B2S355 Putative uncharacterized protein n=2 Tax=Trepon...    89   4e-16 
UniRef100_A9WXR0 Putative uncharacterized protein n=1 Tax=Brucel...    89   4e-16 
UniRef100_A8YUM1 Pseudouridine synthase n=1 Tax=Lactobacillus he...    89   4e-16 
UniRef100_A5VTU8 Pseudouridine synthase n=1 Tax=Brucella ovis AT...    89   4e-16 
UniRef100_Q2BHC1 Pseudouridine synthase n=1 Tax=Neptuniibacter c...    89   4e-16 
UniRef100_C1QRQ4 Ribosomal large subunit pseudouridine synthase ...    89   4e-16 
UniRef100_C1Q0P2 Pseudouridine synthase family protein n=1 Tax=A...    89   4e-16 
UniRef100_B9XSX2 Pseudouridine synthase n=1 Tax=bacterium Ellin5...    89   4e-16 
UniRef100_B6X5D2 Pseudouridine synthase n=1 Tax=Providencia rust...    89   4e-16 
UniRef100_B4TAP6 Pseudouridine synthase n=2 Tax=Salmonella enter...    89   4e-16 
UniRef100_A3K8I4 Pseudouridine synthase n=1 Tax=Sagittula stella...    89   4e-16 
UniRef100_Q8DAS3 Ribosomal large subunit pseudouridine synthase ...    89   4e-16 
UniRef100_UPI000190965F pseudouridine synthase n=1 Tax=Rhizobium...    89   5e-16 
UniRef100_UPI0000F2F3CC putative ribosomal large subunit pseudou...    89   5e-16 
UniRef100_Q7VI91 Pseudouridine synthase n=1 Tax=Helicobacter hep...    89   5e-16 
UniRef100_Q5SLZ5 Pseudouridine synthase n=2 Tax=Thermus thermoph...    89   5e-16 
UniRef100_Q12Q98 Pseudouridine synthase n=1 Tax=Shewanella denit...    89   5e-16 
UniRef100_B0UWB9 Pseudouridine synthase n=1 Tax=Haemophilus somn...    89   5e-16 
UniRef100_C2JPN9 Pseudouridylate synthase n=1 Tax=Enterococcus f...    89   5e-16 
UniRef100_C2HFU2 Pseudouridylate synthase n=1 Tax=Finegoldia mag...    89   5e-16 
UniRef100_C2DF68 Pseudouridylate synthase n=1 Tax=Enterococcus f...    89   5e-16 
UniRef100_C2B7I8 Putative uncharacterized protein n=1 Tax=Citrob...    89   5e-16 
UniRef100_C0RKE5 Putative uncharacterized protein n=1 Tax=Brucel...    89   5e-16 
UniRef100_C0AP40 Hypothetical RNA pseudouridine synthase n=1 Tax...    89   5e-16 
UniRef100_B9CWJ6 Pseudouridine synthase n=1 Tax=Actinobacillus m...    89   5e-16 
UniRef100_B8L084 Pseudouridine synthase n=1 Tax=Stenotrophomonas...    89   5e-16 
UniRef100_A6FNM1 Pseudouridine synthase n=1 Tax=Roseobacter sp. ...    89   5e-16 
UniRef100_B3L0G1 Pseudouridine synthetase, putative n=1 Tax=Plas...    89   5e-16 
UniRef100_Q5LP66 Pseudouridine synthase n=1 Tax=Ruegeria pomeroy...    89   6e-16 
UniRef100_Q5FSS1 Pseudouridine synthase n=1 Tax=Gluconobacter ox...    89   6e-16 
UniRef100_Q3SPI8 Pseudouridine synthase n=1 Tax=Nitrobacter wino...    89   6e-16 
UniRef100_Q3BNY3 Ribosomal small subunit pseudouridylate synthas...    89   6e-16 
UniRef100_Q1QW56 Ribosomal small subunit pseudouridine synthase ...    89   6e-16 
UniRef100_Q0T2T8 Pseudouridine synthase n=2 Tax=Enterobacteriace...    89   6e-16 
UniRef100_B9KEA0 Pseudouridine synthase n=1 Tax=Campylobacter la...    89   6e-16 
UniRef100_B7LJS5 Pseudouridine synthase n=1 Tax=Escherichia ferg...    89   6e-16 
UniRef100_B7L142 Pseudouridine synthase n=1 Tax=Methylobacterium...    89   6e-16 
UniRef100_B2I8L4 Pseudouridine synthase n=2 Tax=Xylella fastidio...    89   6e-16 
UniRef100_A9VXR1 Pseudouridine synthase n=1 Tax=Methylobacterium...    89   6e-16 
UniRef100_C2H1D6 Pseudouridylate synthase n=1 Tax=Enterococcus f...    89   6e-16 
UniRef100_C1ZV13 Ribosomal large subunit pseudouridine synthase ...    89   6e-16 
UniRef100_C1M6M3 16S rRNA pseudouridylate synthase A n=1 Tax=Cit...    89   6e-16 
UniRef100_B7QXE0 Pseudouridine synthase n=1 Tax=Ruegeria sp. R11...    89   6e-16 
UniRef100_B5Q3A1 Ribosomal small subunit pseudouridine synthase ...    89   6e-16 
UniRef100_B3IHJ2 Pseudouridine synthase n=1 Tax=Escherichia coli...    89   6e-16 
UniRef100_A6B0Z9 Pseudouridine synthase n=1 Tax=Vibrio parahaemo...    89   6e-16 
UniRef100_A3IU21 Pseudouridine synthase n=1 Tax=Cyanothece sp. C...    89   6e-16 
UniRef100_A8I7E9 Pseudouridine synthase (Fragment) n=1 Tax=Chlam...    89   6e-16 
UniRef100_B3LCR9 Rna pseudouridylate synthase, putative n=1 Tax=...    89   6e-16 
UniRef100_Q9ZD06 Uncharacterized RNA pseudouridine synthase RP54...    89   6e-16 
UniRef100_P0AA45 Ribosomal small subunit pseudouridine synthase ...    89   6e-16 
UniRef100_UPI00006CCA31 conserved hypothetical protein n=1 Tax=T...    88   8e-16 
UniRef100_Q32HY3 Pseudouridine synthase n=1 Tax=Shigella dysente...    88   8e-16 
UniRef100_Q2SRP5 Ribosomal large subunit pseudouridine synthase ...    88   8e-16 
UniRef100_B8IDJ4 Pseudouridine synthase n=1 Tax=Methylobacterium...    88   8e-16 
UniRef100_B2UZW7 Pseudouridine synthase n=1 Tax=Clostridium botu...    88   8e-16 
UniRef100_B0TRS5 Pseudouridine synthase n=1 Tax=Shewanella halif...    88   8e-16 
UniRef100_B0BY52 Pseudouridine synthase n=1 Tax=Rickettsia ricke...    88   8e-16 
UniRef100_A8GSN5 Pseudouridine synthase n=1 Tax=Rickettsia ricke...    88   8e-16 
UniRef100_A8F215 Pseudouridine synthase n=1 Tax=Rickettsia massi...    88   8e-16 
UniRef100_A5V9U5 Pseudouridine synthase n=1 Tax=Sphingomonas wit...    88   8e-16 
UniRef100_Q4HNJ6 Pseudouridine synthase n=1 Tax=Campylobacter up...    88   8e-16 
UniRef100_B0U5P3 Pseudouridine synthase n=3 Tax=Xylella fastidio...    88   8e-16 
UniRef100_C3LA12 RNA pseudouridine synthase family protein n=1 T...    88   8e-16 
UniRef100_C2AWE8 Pseudouridine synthase family protein n=1 Tax=V...    88   8e-16 
UniRef100_B1EJW5 Pseudouridine synthase n=1 Tax=Escherichia albe...    88   8e-16 
UniRef100_B0QVX5 Pseudouridine synthase n=1 Tax=Haemophilus para...    88   8e-16 
UniRef100_A7JVE0 Pseudouridine synthase n=1 Tax=Mannheimia haemo...    88   8e-16 
UniRef100_A0CHK9 Chromosome undetermined scaffold_182, whole gen...    88   8e-16 
UniRef100_Q9CPN4 Ribosomal small subunit pseudouridine synthase ...    88   8e-16 
UniRef100_Q21EB0 Pseudouridine synthase n=1 Tax=Saccharophagus d...    88   1e-15 
UniRef100_Q0HFB9 Pseudouridine synthase n=1 Tax=Shewanella sp. M...    88   1e-15 
UniRef100_B8F3X1 Pseudouridine synthase n=1 Tax=Haemophilus para...    88   1e-15 
UniRef100_B7IGH1 Pseudouridine synthase n=1 Tax=Thermosipho afri...    88   1e-15 
UniRef100_B2TQQ1 Pseudouridine synthase n=1 Tax=Clostridium botu...    88   1e-15 
UniRef100_A7MLN3 Pseudouridine synthase n=1 Tax=Cronobacter saka...    88   1e-15 
UniRef100_Q7P8V7 Pseudouridine synthase n=1 Tax=Rickettsia sibir...    88   1e-15 
UniRef100_C3PNW3 Ribosomal large subunit pseudouridine synthase ...    88   1e-15 
UniRef100_A7JTV5 Pseudouridine synthase n=1 Tax=Mannheimia haemo...    88   1e-15 
UniRef100_B9FBD7 Putative uncharacterized protein n=1 Tax=Oryza ...    88   1e-15 
UniRef100_UPI00004C276A COG1187: 16S rRNA uridine-516 pseudourid...    87   1e-15 
UniRef100_Q65Q11 Pseudouridine synthase n=1 Tax=Mannheimia succi...    87   1e-15 
UniRef100_Q57MB6 Pseudouridine synthase n=1 Tax=Salmonella enter...    87   1e-15 
UniRef100_B2TV65 Pseudouridine synthase n=1 Tax=Shigella boydii ...    87   1e-15 
UniRef100_B0T1Z8 Pseudouridine synthase n=1 Tax=Caulobacter sp. ...    87   1e-15 
UniRef100_Q3R1Y3 Pseudouridine synthase n=1 Tax=Xylella fastidio...    87   1e-15 
UniRef100_C0G9E7 Putative uncharacterized protein n=1 Tax=Brucel...    87   1e-15 
UniRef100_B8F5Q6 Pseudouridine synthase n=2 Tax=Haemophilus para...    87   1e-15 
UniRef100_UPI000190C2A2 23S rRNA pseudouridylate synthase B n=2 ...    87   2e-15 
UniRef100_Q9I4M5 Putative uncharacterized protein n=1 Tax=Pseudo...    87   2e-15 
UniRef100_Q6F0R7 23S rRNA pseudouridine synthase n=1 Tax=Mesopla...    87   2e-15 
UniRef100_B0TV78 Pseudouridine synthase n=1 Tax=Shewanella halif...    87   2e-15 
UniRef100_A8H7J3 Pseudouridine synthase n=1 Tax=Shewanella peale...    87   2e-15 
UniRef100_A8AE34 Pseudouridine synthase n=1 Tax=Citrobacter kose...    87   2e-15 
UniRef100_A4WCL4 Pseudouridine synthase n=1 Tax=Enterobacter sp....    87   2e-15 
UniRef100_Q0F0K3 Pseudouridine synthase n=1 Tax=Mariprofundus fe...    87   2e-15 
UniRef100_B6R4C5 Pseudouridine synthase n=1 Tax=Pseudovibrio sp....    87   2e-15 
UniRef100_B2PZQ5 Pseudouridine synthase n=1 Tax=Providencia stua...    87   2e-15 
UniRef100_A3X1I3 Pseudouridine synthase n=1 Tax=Nitrobacter sp. ...    87   2e-15 
UniRef100_A3L9Z5 Putative uncharacterized protein n=1 Tax=Pseudo...    87   2e-15 
UniRef100_A4RZI5 Predicted protein (Fragment) n=1 Tax=Ostreococc...    87   2e-15 
UniRef100_A5K079 RNA pseudouridylate synthase, putative n=1 Tax=...    87   2e-15 
UniRef100_Q3Z024 Pseudouridine synthase n=2 Tax=Enterobacteriace...    87   2e-15 
UniRef100_Q0I542 Pseudouridine synthase n=1 Tax=Haemophilus somn...    87   2e-15 
UniRef100_Q086W9 Pseudouridine synthase n=1 Tax=Shewanella frigi...    87   2e-15 
UniRef100_B9DWG3 Pseudouridine synthase n=1 Tax=Streptococcus ub...    87   2e-15 
UniRef100_B7UX79 Putative uncharacterized protein n=1 Tax=Pseudo...    87   2e-15 
UniRef100_B3GZS7 Pseudouridine synthase n=1 Tax=Actinobacillus p...    87   2e-15 
UniRef100_B2ULL1 Pseudouridine synthase n=1 Tax=Akkermansia muci...    87   2e-15 
UniRef100_B0BRZ4 Pseudouridine synthase n=1 Tax=Actinobacillus p...    87   2e-15 
UniRef100_A6X3E0 Pseudouridine synthase n=1 Tax=Ochrobactrum ant...    87   2e-15 
UniRef100_C1A9K5 Ribosomal small subunit pseudouridine synthase ...    87   2e-15 
UniRef100_B6B0L5 Ribosomal large subunit pseudouridine synthase ...    87   2e-15 
UniRef100_B4D8N0 Pseudouridine synthase n=1 Tax=Chthoniobacter f...    87   2e-15 
UniRef100_A4EJV0 Pseudouridine synthase n=1 Tax=Roseobacter sp. ...    87   2e-15 
UniRef100_A3KR55 Putative uncharacterized protein n=1 Tax=Pseudo...    87   2e-15 
UniRef100_A0Y1G6 Pseudouridine synthase n=1 Tax=Alteromonadales ...    87   2e-15 
UniRef100_Q92HG4 Uncharacterized RNA pseudouridine synthase RC08...    87   2e-15 
UniRef100_Q87QY8 Ribosomal large subunit pseudouridine synthase ...    87   2e-15 
UniRef100_UPI000039A9A7 COG1187: 16S rRNA uridine-516 pseudourid...    86   3e-15 
UniRef100_A3MYG0 Pseudouridine synthase n=2 Tax=Actinobacillus p...    86   3e-15 
UniRef100_Q5M0V0 Pseudouridine synthase n=1 Tax=Streptococcus th...    86   3e-15 
UniRef100_B7MXJ9 Pseudouridine synthase n=1 Tax=Escherichia coli...    86   3e-15 
UniRef100_B7M533 Pseudouridine synthase n=1 Tax=Escherichia coli...    86   3e-15 
UniRef100_Q3EK14 Pseudouridine synthase n=1 Tax=Bacillus thuring...    86   3e-15 
UniRef100_B8L192 Pseudouridine synthase n=1 Tax=Stenotrophomonas...    86   3e-15 
UniRef100_A9D774 Pseudouridine synthase n=1 Tax=Shewanella benth...    86   3e-15 
UniRef100_A4U4J5 Pseudouridine synthase n=1 Tax=Magnetospirillum...    86   3e-15 
UniRef100_A4N0H5 Pseudouridine synthase n=1 Tax=Haemophilus infl...    86   3e-15 
UniRef100_Q6LII5 Pseudouridine synthase n=1 Tax=Photobacterium p...    86   4e-15 
UniRef100_Q1IR68 Pseudouridine synthase n=1 Tax=Acidobacteria ba...    86   4e-15 
UniRef100_A7IJY1 Pseudouridine synthase n=1 Tax=Xanthobacter aut...    86   4e-15 
UniRef100_A6VV71 Pseudouridine synthase n=1 Tax=Marinomonas sp. ...    86   4e-15 
UniRef100_A5EVG2 Pseudouridine synthase n=1 Tax=Dichelobacter no...    86   4e-15 
UniRef100_A7K260 Pseudouridine synthase n=1 Tax=Vibrio sp. Ex25 ...    86   4e-15 
UniRef100_B5XP27 Pseudouridine synthase n=1 Tax=Klebsiella pneum...    86   5e-15 
UniRef100_B4SIF1 Pseudouridine synthase n=1 Tax=Stenotrophomonas...    86   5e-15 
UniRef100_A6TBR3 Pseudouridine synthase n=1 Tax=Klebsiella pneum...    86   5e-15 
UniRef100_Q0FG71 Pseudouridine synthase n=1 Tax=Rhodobacterales ...    86   5e-15 
UniRef100_A6E357 Pseudouridine synthase n=1 Tax=Roseovarius sp. ...    86   5e-15 
UniRef100_Q9PE28 Pseudouridine synthase n=1 Tax=Xylella fastidio...    85   7e-15 
UniRef100_Q7VNY4 Pseudouridine synthase n=1 Tax=Haemophilus ducr...    85   7e-15 
UniRef100_Q73PD9 Pseudouridine synthase n=1 Tax=Treponema dentic...    85   7e-15 
UniRef100_Q5M5D6 Pseudouridine synthase n=1 Tax=Streptococcus th...    85   7e-15 
UniRef100_Q21K36 Pseudouridine synthase n=1 Tax=Saccharophagus d...    85   7e-15 
UniRef100_Q1QIP1 Pseudouridine synthase n=1 Tax=Nitrobacter hamb...    85   7e-15 
UniRef100_Q12R43 Pseudouridine synthase, Rsu n=1 Tax=Shewanella ...    85   7e-15 
UniRef100_B5FG74 Pseudouridine synthase n=1 Tax=Vibrio fischeri ...    85   7e-15 
UniRef100_B0RWF2 Ribosomal small subunit pseudouridylate synthas...    85   7e-15 
UniRef100_A9BF27 Pseudouridine synthase n=1 Tax=Petrotoga mobili...    85   7e-15 
UniRef100_A8I6C3 Pseudouridine synthase n=1 Tax=Azorhizobium cau...    85   7e-15 
UniRef100_A6VWI8 Pseudouridine synthase n=1 Tax=Marinomonas sp. ...    85   7e-15 
UniRef100_A5UHI1 Pseudouridine synthase n=1 Tax=Haemophilus infl...    85   7e-15 
UniRef100_C2CK81 Pseudouridylate synthase n=1 Tax=Anaerococcus t...    85   7e-15 
UniRef100_C1RU31 Ribosomal large subunit pseudouridine synthase ...    85   7e-15 
UniRef100_B9R6A1 Pseudouridine synthase n=1 Tax=Labrenzia alexan...    85   7e-15 
UniRef100_B8K5P3 Pseudouridine synthase n=1 Tax=Vibrio parahaemo...    85   7e-15 
UniRef100_B6FEK1 Pseudouridine synthase n=1 Tax=Enterobacter can...    85   7e-15 
UniRef100_A5L1E3 Pseudouridine synthase n=1 Tax=Vibrionales bact...    85   7e-15 
UniRef100_A4P045 Pseudouridine synthase n=1 Tax=Haemophilus infl...    85   7e-15 
UniRef100_A4NH49 Pseudouridine synthase n=1 Tax=Haemophilus infl...    85   7e-15 
UniRef100_A3XY50 Pseudouridine synthase n=1 Tax=Vibrio sp. MED22...    85   7e-15 
UniRef100_A3UY93 Pseudouridine synthase n=1 Tax=Vibrio splendidu...    85   7e-15 
UniRef100_Q31N25 Pseudouridine synthase n=2 Tax=Synechococcus el...    85   9e-15 
UniRef100_Q2G8T2 Pseudouridine synthase n=1 Tax=Novosphingobium ...    85   9e-15 
UniRef100_Q21AV9 Pseudouridine synthase n=1 Tax=Rhodopseudomonas...    85   9e-15 
UniRef100_Q02IS7 Putative uncharacterized protein n=1 Tax=Pseudo...    85   9e-15 
UniRef100_A9IN55 Pseudouridine synthase n=1 Tax=Bartonella tribo...    85   9e-15 
UniRef100_A5IYZ4 16S rRNA uridine-516 pseudouridylate synthasean...    85   9e-15 
UniRef100_A4VLY0 Pseudouridine synthase n=1 Tax=Pseudomonas stut...    85   9e-15 
UniRef100_A3QD81 Pseudouridine synthase n=1 Tax=Shewanella loihi...    85   9e-15 
UniRef100_Q2CAZ2 Pseudouridine synthase n=1 Tax=Oceanicola granu...    85   9e-15 
UniRef100_UPI0000E87FFF hypothetical protein MB2181_05910 n=1 Ta...    84   1e-14 
UniRef100_UPI000039A8A5 COG1187: 16S rRNA uridine-516 pseudourid...    84   1e-14 
UniRef100_Q2JRL1 Pseudouridine synthase n=1 Tax=Synechococcus sp...    84   1e-14 
UniRef100_B7VPT6 Pseudouridine synthase n=2 Tax=Vibrio RepID=B7V...    84   1e-14 
UniRef100_B7J6B5 Pseudouridine synthase n=1 Tax=Acidithiobacillu...    84   1e-14 
UniRef100_B5ELL5 Pseudouridine synthase n=1 Tax=Acidithiobacillu...    84   1e-14 
UniRef100_B4S1R9 Pseudouridine synthase n=1 Tax=Alteromonas macl...    84   1e-14 
UniRef100_B2FLQ8 Pseudouridine synthase n=1 Tax=Stenotrophomonas...    84   1e-14 
UniRef100_A7HQT4 Pseudouridine synthase n=1 Tax=Parvibaculum lav...    84   1e-14 
UniRef100_Q9RCT0 Pseudouridine synthase n=1 Tax=Synechococcus le...    84   1e-14 
UniRef100_Q1NG83 Pseudouridine synthase n=1 Tax=Sphingomonas sp....    84   1e-14 
UniRef100_A5UE31 Pseudouridine synthase n=2 Tax=Haemophilus infl...    84   1e-14 
UniRef100_A1RNF0 Pseudouridine synthase n=3 Tax=Shewanella RepID...    84   1e-14 
UniRef100_B6U7U0 Ribosomal large subunit pseudouridine synthase ...    84   1e-14 
UniRef100_Q8K6Z5 Pseudouridine synthase n=1 Tax=Streptococcus py...    84   2e-14 
UniRef100_Q6LQS3 Pseudouridine synthase n=1 Tax=Photobacterium p...    84   2e-14 
UniRef100_Q5E3X5 Pseudouridine synthase n=1 Tax=Vibrio fischeri ...    84   2e-14 
UniRef100_Q21JF0 Pseudouridine synthase n=1 Tax=Saccharophagus d...    84   2e-14 
UniRef100_A8GGW0 Pseudouridine synthase n=1 Tax=Serratia proteam...    84   2e-14 
UniRef100_B8KTF1 Pseudouridine synthase n=1 Tax=gamma proteobact...    84   2e-14 
UniRef100_A9HAG1 Pseudouridine synthase n=1 Tax=Roseobacter lito...    84   2e-14 
UniRef100_A8T1X4 Pseudouridine synthase n=1 Tax=Vibrio campbelli...    84   2e-14 
UniRef100_A8PMT0 Pseudouridine synthase n=1 Tax=Rickettsiella gr...    84   2e-14 
UniRef100_A6XYQ7 Pseudouridine synthase n=1 Tax=Vibrio cholerae ...    84   2e-14 
UniRef100_P44827 Ribosomal large subunit pseudouridine synthase ...    84   2e-14 
UniRef100_UPI0001903B6F RNA-pseudouridine synthase protein, ribo...    84   2e-14 
UniRef100_UPI0001745920 putative pseudouridylate synthase n=1 Ta...    84   2e-14 
UniRef100_B7VM28 Pseudouridine synthase n=1 Tax=Vibrio splendidu...    84   2e-14 
UniRef100_A1T0E5 Ribosomal small subunit pseudouridine synthase ...    84   2e-14 
UniRef100_C1XNC4 Ribosomal small subunit pseudouridine synthase ...    84   2e-14 
UniRef100_C1DQC4 Pseudouridine synthase, Rsu A n=2 Tax=Azotobact...    84   2e-14 
UniRef100_A6D8M4 Pseudouridine synthase n=1 Tax=Vibrio shilonii ...    84   2e-14 
UniRef100_A4NSW8 Pseudouridine synthase n=1 Tax=Haemophilus infl...    84   2e-14 
UniRef100_A3XZV4 Pseudouridine synthase n=1 Tax=Vibrio sp. MED22...    84   2e-14 
UniRef100_Q6G4S2 Pseudouridine synthase n=1 Tax=Bartonella hense...    83   3e-14 

>UniRef100_P32684 Ribosomal large subunit pseudouridine synthase F
           n=4 Tax=Escherichia RepID=RLUF_ECOLI
          Length = 290

 Score =  576 bits (1485), Expect = e-163
 Identities = 290/290 (100%), Positives = 290/290 (100%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
Sbjct: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290



>UniRef100_A8A7B8 Pseudouridine synthase n=1 Tax=Escherichia coli HS
           RepID=A8A7B8_ECOHS
          Length = 290

 Score =  573 bits (1478), Expect = e-162
 Identities = 288/290 (99%), Positives = 289/290 (99%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
Sbjct: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290



>UniRef100_Q8X4L9 Ribosomal large subunit pseudouridine synthase F
           n=13 Tax=Escherichia coli RepID=RLUF_ECO57
          Length = 290

 Score =  572 bits (1474), Expect = e-161
 Identities = 287/290 (98%), Positives = 288/290 (99%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290



>UniRef100_Q83IR6 Ribosomal large subunit pseudouridine synthase F
           n=6 Tax=Shigella RepID=RLUF_SHIFL
          Length = 290

 Score =  572 bits (1473), Expect = e-161
 Identities = 286/290 (98%), Positives = 288/290 (99%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGD+VKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDIVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290



>UniRef100_B1LPI6 Pseudouridine synthase n=2 Tax=Escherichia coli
           RepID=B1LPI6_ECOSM
          Length = 290

 Score =  570 bits (1470), Expect = e-161
 Identities = 286/290 (98%), Positives = 287/290 (98%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTVGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290



>UniRef100_A7ZUN6 Pseudouridine synthase n=6 Tax=Escherichia coli
           RepID=A7ZUN6_ECO24
          Length = 290

 Score =  570 bits (1470), Expect = e-161
 Identities = 286/290 (98%), Positives = 287/290 (98%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPK KAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
Sbjct: 241 SEAKPKVKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290



>UniRef100_Q8FB47 Ribosomal large subunit pseudouridine synthase F
           n=8 Tax=Escherichia coli RepID=RLUF_ECOL6
          Length = 290

 Score =  569 bits (1467), Expect = e-161
 Identities = 285/290 (98%), Positives = 287/290 (98%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PRE+EDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PRESEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTVGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290



>UniRef100_B7NFW5 Pseudouridine synthase n=1 Tax=Escherichia coli
           UMN026 RepID=B7NFW5_ECOLU
          Length = 290

 Score =  568 bits (1464), Expect = e-160
 Identities = 285/290 (98%), Positives = 287/290 (98%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTVGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290



>UniRef100_B3I352 Pseudouridine synthase n=3 Tax=Escherichia coli
           RepID=B3I352_ECOLX
          Length = 290

 Score =  568 bits (1464), Expect = e-160
 Identities = 284/290 (97%), Positives = 287/290 (98%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPK KAKPKTAGIKRP+VKMEKT+EKGGRPASNGKRFTSPGRKKKGR
Sbjct: 241 SEAKPKVKAKPKTAGIKRPLVKMEKTSEKGGRPASNGKRFTSPGRKKKGR 290



>UniRef100_Q328P9 Pseudouridine synthase n=1 Tax=Shigella
           dysenteriae Sd197 RepID=Q328P9_SHIDS
          Length = 290

 Score =  568 bits (1463), Expect = e-160
 Identities = 285/290 (98%), Positives = 287/290 (98%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSL+GIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLNGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKTAGIKRPVVKMEKTAEKGG PASNGKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTAGIKRPVVKMEKTAEKGGCPASNGKRFTSPGRKKKGR 290



>UniRef100_B7LKW6 Pseudouridine synthase n=1 Tax=Escherichia
           fergusonii ATCC 35469 RepID=B7LKW6_ESCF3
          Length = 290

 Score =  567 bits (1461), Expect = e-160
 Identities = 282/290 (97%), Positives = 289/290 (99%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSS+RLNKYISESGICSRREADR+IEQGNVF+NGKRATIGDQVKPGDVVKVNG+LIE
Sbjct: 1   MLPDSSIRLNKYISESGICSRREADRFIEQGNVFINGKRATIGDQVKPGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS+
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENST 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SEVKPKAKAKPKTAGIKRPVVKMEKT+EKGGRPASNGKRFTSPGRKKKGR
Sbjct: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTSEKGGRPASNGKRFTSPGRKKKGR 290



>UniRef100_C1HQ43 23S rRNA pseudouridine synthase F n=1
           Tax=Escherichia sp. 3_2_53FAA RepID=C1HQ43_9ESCH
          Length = 290

 Score =  567 bits (1461), Expect = e-160
 Identities = 284/290 (97%), Positives = 286/290 (98%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PRE+EDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKD QGLIFLTNHG
Sbjct: 61  PRESEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDFQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTVGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290



>UniRef100_Q0TA39 Pseudouridine synthase n=1 Tax=Escherichia coli
           536 RepID=Q0TA39_ECOL5
          Length = 290

 Score =  565 bits (1457), Expect = e-159
 Identities = 283/290 (97%), Positives = 285/290 (98%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PRE+EDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PRESEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILR GNDHEKEYLVTVDKPIT+EFIRGM  GVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRPGNDHEKEYLVTVDKPITDEFIRGMGPGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTVGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290



>UniRef100_B1EQI4 Pseudouridine synthase n=1 Tax=Escherichia
           albertii TW07627 RepID=B1EQI4_9ESCH
          Length = 290

 Score =  557 bits (1435), Expect = e-157
 Identities = 278/290 (95%), Positives = 284/290 (97%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQV PGDVVKVNGQLIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVNPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKP+T+EF+ GM+AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPVTDEFVTGMAAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELI+LFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIELFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           S  KPKAKAKPKT GIKRPVVKMEKTAEKG RPASNGKRFTSPGRKKKGR
Sbjct: 241 SGTKPKAKAKPKTTGIKRPVVKMEKTAEKGSRPASNGKRFTSPGRKKKGR 290



>UniRef100_C2BBJ9 Putative uncharacterized protein n=1
           Tax=Citrobacter youngae ATCC 29220 RepID=C2BBJ9_9ENTR
          Length = 318

 Score =  541 bits (1395), Expect = e-152
 Identities = 270/291 (92%), Positives = 282/291 (96%), Gaps = 1/291 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSS+RLNKYISESGICSRREADR+IEQGNVFLNGKRATIGDQVKPGDVVKVNG+LIE
Sbjct: 28  MLPDSSIRLNKYISESGICSRREADRFIEQGNVFLNGKRATIGDQVKPGDVVKVNGRLIE 87

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLV IALNKPVGIVSTTED ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 88  PREAEDLVFIALNKPVGIVSTTEDSERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 147

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT++FIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 148 DLVNKILRAGNDHEKEYLVTVDKPITDDFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 207

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           L+QGLNRQIRRMCEHFGYEV +LERTRIMNV LSG+PLGEWRDLTDDELI+LFKLIENSS
Sbjct: 208 LIQGLNRQIRRMCEHFGYEVTRLERTRIMNVGLSGLPLGEWRDLTDDELIELFKLIENSS 267

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEK-GGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKTAGIKRPVVK+EK+AEK   RPA+NGKRFTSPGRKKKGR
Sbjct: 268 SEAKPKAKAKPKTAGIKRPVVKIEKSAEKEKSRPAANGKRFTSPGRKKKGR 318



>UniRef100_C1MFE6 23S rRNA pseudouridine synthase F n=1
           Tax=Citrobacter sp. 30_2 RepID=C1MFE6_9ENTR
          Length = 291

 Score =  541 bits (1395), Expect = e-152
 Identities = 270/291 (92%), Positives = 281/291 (96%), Gaps = 1/291 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSS+RLNKYISESGICSRREADR+IEQGNVFLNGKRATIGDQV PGDVVKVNG+LIE
Sbjct: 1   MLPDSSIRLNKYISESGICSRREADRFIEQGNVFLNGKRATIGDQVMPGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLV IALNKPVGIVSTTED ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVFIALNKPVGIVSTTEDSERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKP+T++FIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPVTDDFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           L+QGLNRQIRRMCEHFGYEV KLERTRIMNV LSG+PLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LIQGLNRQIRRMCEHFGYEVTKLERTRIMNVGLSGLPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEK-GGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKTAGIKRPVVK+EK+AEK   RPA+NGKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTAGIKRPVVKIEKSAEKEKSRPAANGKRFTSPGRKKKGR 291



>UniRef100_A8ANB1 Pseudouridine synthase n=1 Tax=Citrobacter koseri
           ATCC BAA-895 RepID=A8ANB1_CITK8
          Length = 291

 Score =  534 bits (1376), Expect = e-150
 Identities = 270/292 (92%), Positives = 279/292 (95%), Gaps = 3/292 (1%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSSVRLNKYISESGICSRREADRYIEQGNVF+NGKRATIGDQV PGDVVKVNG+LIE
Sbjct: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFINGKRATIGDQVMPGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREAEDLV IALNKPVGIVSTTED ERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREAEDLVFIALNKPVGIVSTTEDSERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKP+T++FIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPVTDDFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           L+QGLNRQIRRMCEHFGYEV KLERTRIMNVSLSG+P GEWRDLTDDELI LFKLIENSS
Sbjct: 181 LIQGLNRQIRRMCEHFGYEVTKLERTRIMNVSLSGLPPGEWRDLTDDELIALFKLIENSS 240

Query: 241 SEVKP--KAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KP  KAKAKPKTAGIKRPVVK+EKT EK  RPASNGKRFTSPGRKKKGR
Sbjct: 241 SEAKPTSKAKAKPKTAGIKRPVVKIEKTNEK-ARPASNGKRFTSPGRKKKGR 291



>UniRef100_B5XY09 Pseudouridine synthase n=1 Tax=Klebsiella
           pneumoniae 342 RepID=B5XY09_KLEP3
          Length = 291

 Score =  531 bits (1368), Expect = e-149
 Identities = 267/292 (91%), Positives = 279/292 (95%), Gaps = 3/292 (1%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSS RLNKYISESGICSRREADR+IEQGNVF+NGKRATIGDQVKPGD+VKVNG+LIE
Sbjct: 1   MLPDSSTRLNKYISESGICSRREADRFIEQGNVFINGKRATIGDQVKPGDLVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKP+T+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPVTDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEV KLERTRIMNVSL+GIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVTKLERTRIMNVSLTGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKA--KAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKA  KAK  T GIKRPVVKME + +K GRPA+NGKRFT PGRKKKGR
Sbjct: 241 SEAKPKARPKAKAATPGIKRPVVKMENSNDK-GRPAANGKRFTQPGRKKKGR 291



>UniRef100_A6TGT0 Pseudouridine synthase n=1 Tax=Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578
           RepID=A6TGT0_KLEP7
          Length = 291

 Score =  531 bits (1367), Expect = e-149
 Identities = 267/292 (91%), Positives = 278/292 (95%), Gaps = 3/292 (1%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLPDSS RLNKYISESGICSRREADR+IEQGNVF+NGKRATIGDQVKPGD+VKVNG+LIE
Sbjct: 1   MLPDSSTRLNKYISESGICSRREADRFIEQGNVFINGKRATIGDQVKPGDLVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKP+T+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPVTDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEV KLERTRIMNVSL+GIPLGEWRDLTDDELIDLFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVTKLERTRIMNVSLTGIPLGEWRDLTDDELIDLFKLIENSS 240

Query: 241 SEVKPKA--KAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKA  KAK  T GIKRPVVKME + +K GRPA NGKRFT PGRKKKGR
Sbjct: 241 SEAKPKARPKAKAATPGIKRPVVKMENSNDK-GRPAGNGKRFTQPGRKKKGR 291



>UniRef100_Q8Z1V3 Ribosomal large subunit pseudouridine synthase F
           n=2 Tax=Salmonella enterica subsp. enterica serovar
           Typhi RepID=RLUF_SALTI
          Length = 289

 Score =  527 bits (1358), Expect = e-148
 Identities = 266/290 (91%), Positives = 277/290 (95%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSTRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIEGSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKTAGIKRPVV +EK+ EK  RPAS+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTAGIKRPVVAIEKSNEK-ARPASSGKRFTSPGRKKKGR 289



>UniRef100_B5PIZ4 Pseudouridine synthase n=1 Tax=Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537
           RepID=B5PIZ4_SALET
          Length = 289

 Score =  527 bits (1357), Expect = e-148
 Identities = 265/290 (91%), Positives = 277/290 (95%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S+RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSIRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIERSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVV +EK+ EK  RPAS+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTTGIKRPVVAIEKSNEK-ARPASSGKRFTSPGRKKKGR 289



>UniRef100_B5FQN4 Pseudouridine synthase n=2 Tax=Salmonella enterica
           subsp. enterica RepID=B5FQN4_SALDC
          Length = 289

 Score =  526 bits (1356), Expect = e-148
 Identities = 264/290 (91%), Positives = 277/290 (95%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S+RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSIRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIERSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPV+ +EK+ EK  RPAS+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTTGIKRPVIAIEKSNEK-ARPASSGKRFTSPGRKKKGR 289



>UniRef100_B5F1K6 Pseudouridine synthase n=1 Tax=Salmonella enterica
           subsp. enterica serovar Agona str. SL483
           RepID=B5F1K6_SALA4
          Length = 289

 Score =  526 bits (1355), Expect = e-148
 Identities = 265/290 (91%), Positives = 277/290 (95%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSTRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE+SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIEHSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVV +EK+ EK  RPAS+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTTGIKRPVVAIEKSNEK-ARPASSGKRFTSPGRKKKGR 289



>UniRef100_B4T1N2 Pseudouridine synthase n=5 Tax=Salmonella enterica
           subsp. enterica RepID=B4T1N2_SALNS
          Length = 289

 Score =  526 bits (1354), Expect = e-147
 Identities = 265/290 (91%), Positives = 276/290 (95%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSTRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIERSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVV +EK+ EK  RPAS+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTTGIKRPVVAIEKSNEK-ARPASSGKRFTSPGRKKKGR 289



>UniRef100_UPI000190C223 23S rRNA pseudouridine synthase F n=1
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           str. E00-7866 RepID=UPI000190C223
          Length = 289

 Score =  525 bits (1353), Expect = e-147
 Identities = 265/290 (91%), Positives = 276/290 (95%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSTRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEW DLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWHDLTDDELIDLFKLIEGSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKTAGIKRPVV +EK+ EK  RPAS+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTAGIKRPVVAIEKSNEK-ARPASSGKRFTSPGRKKKGR 289



>UniRef100_Q57H34 Pseudouridine synthase n=1 Tax=Salmonella enterica
           RepID=Q57H34_SALCH
          Length = 289

 Score =  525 bits (1353), Expect = e-147
 Identities = 264/290 (91%), Positives = 276/290 (95%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S+RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSIRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIERSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVV +EK+ EK  RP S+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTTGIKRPVVAIEKSNEK-ARPTSSGKRFTSPGRKKKGR 289



>UniRef100_B5BJT7 Pseudouridine synthase n=2 Tax=Salmonella enterica
           subsp. enterica serovar Paratyphi A RepID=B5BJT7_SALPK
          Length = 289

 Score =  525 bits (1353), Expect = e-147
 Identities = 264/290 (91%), Positives = 276/290 (95%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GD+VKVNG+LIE
Sbjct: 1   MLTDTSTRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDIVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIERSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVV +EK+ EK  RPAS+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTTGIKRPVVAIEKSNEK-ARPASSGKRFTSPGRKKKGR 289



>UniRef100_B5MQL0 Pseudouridine synthase n=3 Tax=Salmonella enterica
           subsp. enterica RepID=B5MQL0_SALET
          Length = 289

 Score =  524 bits (1350), Expect = e-147
 Identities = 264/290 (91%), Positives = 275/290 (94%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSTRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIERSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVV +EK+ EK  RP S+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTTGIKRPVVAIEKSNEK-ARPTSSGKRFTSPGRKKKGR 289



>UniRef100_Q8ZKL1 Ribosomal large subunit pseudouridine synthase F
           n=6 Tax=Salmonella enterica subsp. enterica
           RepID=RLUF_SALTY
          Length = 289

 Score =  524 bits (1349), Expect = e-147
 Identities = 263/290 (90%), Positives = 275/290 (94%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GD+VKVNG+LIE
Sbjct: 1   MLTDTSTRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDIVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIERSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVV +EK+ EK  RP S+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTTGIKRPVVAIEKSNEK-ARPTSSGKRFTSPGRKKKGR 289



>UniRef100_B5R7R2 Pseudouridine synthase n=1 Tax=Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91
           RepID=B5R7R2_SALG2
          Length = 289

 Score =  523 bits (1348), Expect = e-147
 Identities = 263/290 (90%), Positives = 276/290 (95%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S+RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSIRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGV ILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVSILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIERSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPV+ +EK+ EK  RPAS+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTTGIKRPVIAIEKSNEK-ARPASSGKRFTSPGRKKKGR 289



>UniRef100_C0Q496 Putative pseudouridine synthase n=1 Tax=Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594 RepID=C0Q496_SALPC
          Length = 289

 Score =  522 bits (1345), Expect = e-146
 Identities = 263/290 (90%), Positives = 275/290 (94%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S+RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSIRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            REA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  SREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIERSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVV +EK+ EK  RP S+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTTGIKRPVVAIEKSNEK-ARPTSSGKRFTSPGRKKKGR 289



>UniRef100_B3YH52 Pseudouridine synthase n=2 Tax=Salmonella enterica
           subsp. enterica serovar Kentucky RepID=B3YH52_SALET
          Length = 289

 Score =  522 bits (1345), Expect = e-146
 Identities = 263/290 (90%), Positives = 274/290 (94%), Gaps = 1/290 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSTRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLV VDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVAVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIERSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT GIKRPVV +EK+ EK  RP S+GKRFTSPGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTTGIKRPVVAIEKSNEK-ARPTSSGKRFTSPGRKKKGR 289



>UniRef100_A9MHB0 Pseudouridine synthase n=1 Tax=Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- RepID=A9MHB0_SALAR
          Length = 309

 Score =  519 bits (1337), Expect = e-145
 Identities = 262/292 (89%), Positives = 276/292 (94%), Gaps = 3/292 (1%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S+RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 19  MLTDTSIRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 78

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FP+GRLDKDSQGLIFLTNHG
Sbjct: 79  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPVGRLDKDSQGLIFLTNHG 138

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKP+T+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 139 DLVNKILRAGNDHEKEYLVTVDKPVTDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 198

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGY+V KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 199 LVQGLNRQIRRMCEHFGYDVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIERSS 258

Query: 241 SEVKPKAKA--KPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE K K KA  KPKTAGIKRPVV +EK+ EK  RPAS+GKRFTSPGRKKKGR
Sbjct: 259 SEAKTKTKATPKPKTAGIKRPVVAIEKSNEK-ARPASSGKRFTSPGRKKKGR 309



>UniRef100_B6F6E0 Pseudouridine synthase n=1 Tax=Enterobacter
           cancerogenus ATCC 35316 RepID=B6F6E0_9ENTR
          Length = 290

 Score =  517 bits (1332), Expect = e-145
 Identities = 257/290 (88%), Positives = 267/290 (92%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLP  S RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQV PGDVVKVNGQLIE
Sbjct: 1   MLPTQSTRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVVPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PR+AEDLV IALNKPVGIVSTTEDGERDNIVDFVNHS R+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PRDAEDLVFIALNKPVGIVSTTEDGERDNIVDFVNHSSRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEY+VTV+KP+T+EFIRGM AGVPILGTVTKKCKVKKEAPF FRIT
Sbjct: 121 DLVNKILRAGNDHEKEYIVTVNKPVTDEFIRGMGAGVPILGTVTKKCKVKKEAPFAFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGY+V KLERTRIMNVSLSGIPLGEWRDLTDDELI+LF+LIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGYDVTKLERTRIMNVSLSGIPLGEWRDLTDDELIELFRLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE KPKAKAKPKT  IKRPVVK     EKG    +NGKRF  PGRKKKGR
Sbjct: 241 SEAKPKAKAKPKTQAIKRPVVKAPPAEEKGRGKPANGKRFAQPGRKKKGR 290



>UniRef100_A4W5D6 Pseudouridine synthase n=1 Tax=Enterobacter sp.
           638 RepID=A4W5D6_ENT38
          Length = 289

 Score =  500 bits (1287), Expect = e-140
 Identities = 252/291 (86%), Positives = 264/291 (90%), Gaps = 3/291 (1%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           MLP+ S RLNKYISESGICSRREADRYIEQGNVF+NGKRA IGDQV PGDVVKVNGQLIE
Sbjct: 1   MLPNQSTRLNKYISESGICSRREADRYIEQGNVFINGKRAAIGDQVAPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PR  EDLV IALNKPVGIVSTTEDGERDNIVDFVNHS R+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PRNEEDLVFIALNKPVGIVSTTEDGERDNIVDFVNHSSRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEY+VTV+KPIT++FIRGM AGVPILGTVTKKCKVKKEAPF FRIT
Sbjct: 121 DLVNKILRAGNDHEKEYVVTVNKPITDDFIRGMGAGVPILGTVTKKCKVKKEAPFAFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFG+EV KLERTRIMNVSLSGIPLGEWRDL  DELI+LFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCEHFGFEVTKLERTRIMNVSLSGIPLGEWRDLNGDELIELFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEK-GGRPASNGKRFTSPGRKKKGR 290
           S+ KPK KAKPKT GIKRPVV    +AEK   +PA  GKRF  PGRKKKGR
Sbjct: 241 SDAKPKTKAKPKTQGIKRPVVNAPASAEKERNKPA--GKRFVQPGRKKKGR 289



>UniRef100_UPI000190CF24 23S rRNA pseudouridine synthase F n=1
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           str. E02-1180 RepID=UPI000190CF24
          Length = 267

 Score =  491 bits (1265), Expect = e-137
 Identities = 246/265 (92%), Positives = 255/265 (96%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSTRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIEGSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEK 265
           SE KPKAKAKPKTAGIKRPVV +EK
Sbjct: 241 SEAKPKAKAKPKTAGIKRPVVAIEK 265



>UniRef100_B1JGR5 Pseudouridine synthase n=3 Tax=Yersinia
           pseudotuberculosis RepID=B1JGR5_YERPY
          Length = 290

 Score =  472 bits (1215), Expect = e-131
 Identities = 232/290 (80%), Positives = 258/290 (88%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML +SS+RLNKYISESGICSRR+ DRYIEQGNVF+NGKRAT+GDQV  GDVVKVNGQ+IE
Sbjct: 1   MLTNSSIRLNKYISESGICSRRDGDRYIEQGNVFINGKRATVGDQVFAGDVVKVNGQIIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PR+ EDLV IALNKP GI++T E+GERDNI DFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PRDEEDLVFIALNKPAGIITTMEEGERDNISDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGN+HEKEY+VTV+KP+T+EFI+GMSAGVPILGTVTKKCKV+KEAP VFRIT
Sbjct: 121 DLVNKILRAGNNHEKEYVVTVNKPVTDEFIQGMSAGVPILGTVTKKCKVQKEAPLVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMC+HFGYEV KLERTRIMN+SL G+PLGEWRDLTDDEL+ LFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCKHFGYEVTKLERTRIMNISLKGLPLGEWRDLTDDELLTLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE K   KA PK    KRP ++ +K AEK     ++ KRFT PGRKKKGR
Sbjct: 241 SEEKTVKKAPPKPVAAKRPGIQGQKKAEKSDDNTASRKRFTQPGRKKKGR 290



>UniRef100_A7FL22 Pseudouridine synthase n=1 Tax=Yersinia
           pseudotuberculosis IP 31758 RepID=A7FL22_YERP3
          Length = 290

 Score =  470 bits (1210), Expect = e-131
 Identities = 231/290 (79%), Positives = 257/290 (88%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML +SS+RLNKYISESGICSRR+ DRYIEQGNVF+NGKRAT+GDQV  GDVVKVNGQ+IE
Sbjct: 1   MLTNSSIRLNKYISESGICSRRDGDRYIEQGNVFINGKRATVGDQVFAGDVVKVNGQIIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PR+ EDLV IALNKP GI++T E+GERDNI DFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PRDEEDLVFIALNKPAGIITTMEEGERDNISDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGN+HEKEY+VTV+KP+T+EFI+GMSAGVPILGTVTKKCKV+KEAP VFRIT
Sbjct: 121 DLVNKILRAGNNHEKEYVVTVNKPVTDEFIQGMSAGVPILGTVTKKCKVQKEAPLVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMC+HFGYEV KLERTRIMN+SL G+PLGEWRDLTDDEL+ LFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCKHFGYEVTKLERTRIMNISLKGLPLGEWRDLTDDELLTLFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SE K   KA PK    KRP ++ +K AEK     ++ K FT PGRKKKGR
Sbjct: 241 SEEKTVKKAPPKPVAAKRPGIQGQKKAEKSDDNTASRKHFTQPGRKKKGR 290



>UniRef100_A1JLY7 Pseudouridine synthase n=1 Tax=Yersinia
           enterocolitica subsp. enterocolitica 8081
           RepID=A1JLY7_YERE8
          Length = 290

 Score =  467 bits (1202), Expect = e-130
 Identities = 228/290 (78%), Positives = 257/290 (88%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M+ +SS+RLNKYISESGICSRR+ADRYIEQGNVF+NGKRAT+G+QV  GDVVKVNGQLIE
Sbjct: 1   MVTNSSIRLNKYISESGICSRRDADRYIEQGNVFINGKRATVGEQVYAGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PR+  DLVLIALNKPVGI+ TTEDGE DNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PRDQNDLVLIALNKPVGIICTTEDGEGDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEY+VTV+KP+T+EFI G+ AGVP+LGTVTKKCKV+KEAPFVF IT
Sbjct: 121 DLVNKILRAGNDHEKEYVVTVNKPLTDEFILGLGAGVPMLGTVTKKCKVRKEAPFVFSIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMC++FGYEV KLERTRIMN++L G+P+GEWRDL DDELI+LFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCKYFGYEVTKLERTRIMNINLKGLPIGEWRDLRDDELIELFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           S+ KP+ K K K    K+P +   K AEK    ++  KRFT PGRKKKGR
Sbjct: 241 SDEKPQKKPKAKPVVAKKPAISRSKPAEKSEANSAGRKRFTQPGRKKKGR 290



>UniRef100_B2VFA8 Pseudouridine synthase n=1 Tax=Erwinia
           tasmaniensis RepID=B2VFA8_ERWT9
          Length = 293

 Score =  462 bits (1190), Expect = e-128
 Identities = 236/293 (80%), Positives = 255/293 (87%), Gaps = 3/293 (1%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML + S+RLNKYI ESGICSRR+ADRYIEQGNVF+NGKRA++GD+V  GDVVKVNGQLIE
Sbjct: 1   MLTNPSIRLNKYIGESGICSRRDADRYIEQGNVFINGKRASVGDRVLAGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PR  EDLV+IALNKPVGIVSTTE+GERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PRNEEDLVVIALNKPVGIVSTTEEGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTV+KP+TEEFIRG+ AGVP+LGTVTKKCKVKKE+ FVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVNKPVTEEFIRGLGAGVPMLGTVTKKCKVKKESTFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRM EHFGYEV KLERTRIMNVSL G+P GEWRDLTDDELI+LFKLIENSS
Sbjct: 181 LVQGLNRQIRRMSEHFGYEVTKLERTRIMNVSLKGLPPGEWRDLTDDELIELFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRP-VVKMEKTAEKGGRPASNG--KRFTSPGRKKKGR 290
           SE     KAKPK +  K+P  V   K   K G  A+    KRF  PGRKKKGR
Sbjct: 241 SEDGAAKKAKPKASSAKKPAAVSGAKAGAKAGGNANAAARKRFVQPGRKKKGR 293



>UniRef100_UPI000191401C 23S rRNA pseudouridine synthase F n=2
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           RepID=UPI000191401C
          Length = 256

 Score =  462 bits (1188), Expect = e-128
 Identities = 230/255 (90%), Positives = 242/255 (94%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D+S RLNKYISESGICSRREADR+IEQGNVF+NGKRA IGDQV  GDVVKVNG+LIE
Sbjct: 1   MLTDTSTRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKR+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIEGSS 240

Query: 241 SEVKPKAKAKPKTAG 255
           SE KPK +++ +  G
Sbjct: 241 SEAKPKGQSEAEDRG 255



>UniRef100_B2Q0W3 Pseudouridine synthase n=1 Tax=Providencia
           stuartii ATCC 25827 RepID=B2Q0W3_PROST
          Length = 291

 Score =  462 bits (1188), Expect = e-128
 Identities = 235/287 (81%), Positives = 253/287 (88%), Gaps = 1/287 (0%)

Query: 5   SSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREA 64
           SS RLNKYISESGICSRR+ADRYIEQGNVF+NGKRA IGDQV  GDVVKVNGQLIEPR  
Sbjct: 5   SSTRLNKYISESGICSRRDADRYIEQGNVFINGKRAAIGDQVFSGDVVKVNGQLIEPRNE 64

Query: 65  EDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
           EDLVLIALNKPVGIVSTTE GERDNIVD+VNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN
Sbjct: 65  EDLVLIALNKPVGIVSTTESGERDNIVDYVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRAGN+HEKEYLVTV+KPIT++FIRGM AGVPILGTVTKKCKVKKEAPFVFRITLVQG
Sbjct: 125 KILRAGNEHEKEYLVTVNKPITDDFIRGMGAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVK 244
           LNRQIRRMCE+FG+EV KLER RIMNV+LSGIPLGEWRDLTDDELI LF++IE S SE K
Sbjct: 185 LNRQIRRMCEYFGFEVTKLERVRIMNVNLSGIPLGEWRDLTDDELIKLFEMIEKSESEAK 244

Query: 245 PKAKAKPKTAGIKRPVVKMEKTAE-KGGRPASNGKRFTSPGRKKKGR 290
           PK  AKPKT+   +   K    ++ KG    ++ KRFT PGRKKK R
Sbjct: 245 PKKSAKPKTSTAGKTGSKPNAGSKPKGMADTASRKRFTQPGRKKKRR 291



>UniRef100_UPI00005F7CDD COG1187: 16S rRNA uridine-516
           pseudouridylate synthase and related pseudouridylate
           synthases n=1 Tax=Yersinia bercovieri ATCC 43970
           RepID=UPI00005F7CDD
          Length = 290

 Score =  458 bits (1178), Expect = e-127
 Identities = 226/290 (77%), Positives = 253/290 (87%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML +SS+RLNKYISESGICSRR+ADRYIEQGNVF+NGKRAT+G QV  GDVVKVNGQ+IE
Sbjct: 1   MLTNSSIRLNKYISESGICSRRDADRYIEQGNVFINGKRATVGVQVSAGDVVKVNGQIIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PR  EDL+LIALNKPVG++STTEDGE++NIVDFVNHSKRVFPIGRLDKDSQGLI LTNHG
Sbjct: 61  PRNEEDLILIALNKPVGVISTTEDGEQNNIVDFVNHSKRVFPIGRLDKDSQGLILLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEY+VTV+KP+T+EFI G+ AGVP+LGTVTKKCKVK+EA FVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYVVTVNKPVTDEFILGLGAGVPMLGTVTKKCKVKREATFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMC+HFGYEV KLER RIMN+SL G+P GEWRDLT+DELI+LFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCKHFGYEVTKLERVRIMNISLKGLPQGEWRDLTEDELIELFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           S+ KP  KA  K    KR  +   K  EK    A++ KRF  PGRKKKGR
Sbjct: 241 SDEKPVKKAPVKAVEAKRVSISGPKKTEKPDGNAASRKRFAQPGRKKKGR 290



>UniRef100_A8GIX6 Pseudouridine synthase n=1 Tax=Serratia
           proteamaculans 568 RepID=A8GIX6_SERP5
          Length = 286

 Score =  457 bits (1177), Expect = e-127
 Identities = 231/292 (79%), Positives = 253/292 (86%), Gaps = 8/292 (2%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML   S RLNKYISESGICSRR+ADRYIEQGNVF+NGKR T+GDQV PGDVVKVNGQLIE
Sbjct: 1   MLTKPSTRLNKYISESGICSRRDADRYIEQGNVFINGKRVTLGDQVFPGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PR  ++L+ IALNKPVGIVSTTE+GE+DNIVDFVNHS R+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PRNEDNLIFIALNKPVGIVSTTEEGEKDNIVDFVNHSTRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTV+KP+T++FIRG+ AGVP+LGTVTKKCKVKKEAPFVFRI 
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVNKPVTDDFIRGLGAGVPMLGTVTKKCKVKKEAPFVFRIV 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEV KLERTRIMNV ++G+P GEWRDLTDDEL++LFK IE SS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVTKLERTRIMNVGMAGLPPGEWRDLTDDELVELFKSIEGSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEK--GGRPASNGKRFTSPGRKKKGR 290
           SE KP  KAKP     K+P     K+ EK  GG PA   KRF  PGRKKKGR
Sbjct: 241 SEAKPAKKAKP---AAKKP-ASAPKSVEKPAGGAPAR--KRFAQPGRKKKGR 286



>UniRef100_UPI00005F9C30 COG1187: 16S rRNA uridine-516
           pseudouridylate synthase and related pseudouridylate
           synthases n=1 Tax=Yersinia intermedia ATCC 29909
           RepID=UPI00005F9C30
          Length = 290

 Score =  456 bits (1174), Expect = e-127
 Identities = 227/290 (78%), Positives = 250/290 (86%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML +SS RLNKYI ESGICSRR+ADRYIEQG+VF+NGKRA +GDQV  GDVVKVNGQLIE
Sbjct: 1   MLTNSSTRLNKYIGESGICSRRDADRYIEQGHVFINGKRAAVGDQVYSGDVVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PR   DLVLIALNKPVGI+STTE+GE DNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PRNENDLVLIALNKPVGIISTTEEGESDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTV+KP+TEEFI G+ AGVP++GTVTKKCKV K A FVF IT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVNKPVTEEFILGLGAGVPMMGTVTKKCKVSKVATFVFNIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMC+HFGYEV KLERTRIMNV+L G+P+GEWRDLTDDELI+LFKLIENSS
Sbjct: 181 LVQGLNRQIRRMCKHFGYEVTKLERTRIMNVTLKGLPMGEWRDLTDDELIELFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           S+ KP  K + K+   K+P V   K  EK    ++  KRF  PGRKKKGR
Sbjct: 241 SDEKPVKKVQAKSVADKKPRVNGVKKPEKSDSNSAPRKRFAQPGRKKKGR 290



>UniRef100_UPI00005F8B08 COG1187: 16S rRNA uridine-516
           pseudouridylate synthase and related pseudouridylate
           synthases n=1 Tax=Yersinia mollaretii ATCC 43969
           RepID=UPI00005F8B08
          Length = 290

 Score =  454 bits (1168), Expect = e-126
 Identities = 227/290 (78%), Positives = 251/290 (86%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML +SS+RLNKYISESGICSRR+ADRYIEQGNVF+NGKRA +G QV PGDVVKVNGQ IE
Sbjct: 1   MLTNSSIRLNKYISESGICSRRDADRYIEQGNVFINGKRAAVGVQVFPGDVVKVNGQTIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PR  EDLVLIALNKPVG++STTEDGE++NIVDFVNHSKRVFPIGRLDKDSQGLI LTNHG
Sbjct: 61  PRNEEDLVLIALNKPVGVISTTEDGEQNNIVDFVNHSKRVFPIGRLDKDSQGLILLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEY+VTV+KP+T+EFI G+ AGVP+LGTVTKKCKVKKE+ FVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYVVTVNKPVTDEFILGLGAGVPMLGTVTKKCKVKKESTFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRM +HFGYEV KLER RIMN+SL G+P GEWRDLT+DELI+LFKLIENSS
Sbjct: 181 LVQGLNRQIRRMTKHFGYEVTKLERVRIMNISLKGLPQGEWRDLTEDELIELFKLIENSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           S+ KP  KA  K    KR  +   K AEK    A+  KRF  PGRKKKGR
Sbjct: 241 SDEKPAKKAPVKRVEAKRVSISGPKKAEKPDSNAAARKRFAQPGRKKKGR 290



>UniRef100_B6X4U2 Pseudouridine synthase n=1 Tax=Providencia
           rustigianii DSM 4541 RepID=B6X4U2_9ENTR
          Length = 291

 Score =  450 bits (1157), Expect = e-125
 Identities = 229/294 (77%), Positives = 253/294 (86%), Gaps = 13/294 (4%)

Query: 4   DSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPRE 63
           +SS RLNKYISESGICSRREADRYIEQGNVF+NGKRA IGDQV  GD+VKVNGQLIEPR+
Sbjct: 4   NSSTRLNKYISESGICSRREADRYIEQGNVFINGKRAGIGDQVSAGDIVKVNGQLIEPRD 63

Query: 64  AEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLV 123
            +DLVLIALNKPVGIVSTTE GE+ NIVD+VNHSKR+FPIGRLDKDSQGLIFLTNHGDLV
Sbjct: 64  EDDLVLIALNKPVGIVSTTESGEKGNIVDYVNHSKRIFPIGRLDKDSQGLIFLTNHGDLV 123

Query: 124 NKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQ 183
           NKILRAGNDHEKEY+VTV+KP+T+EFI+GM++GVPILGT+TKKCKVKKEAPFVFRITLVQ
Sbjct: 124 NKILRAGNDHEKEYVVTVNKPVTDEFIQGMASGVPILGTMTKKCKVKKEAPFVFRITLVQ 183

Query: 184 GLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEV 243
           GLNRQIRRM EHFGYEV KLER RIMNV L+GIP+GEWRDLTDDELI+LF LIE S S+V
Sbjct: 184 GLNRQIRRMTEHFGYEVTKLERVRIMNVKLTGIPVGEWRDLTDDELIELFNLIEKSESDV 243

Query: 244 KPKAKAKPKTAGIKRPVVKMEKTAEKGG---RPASNG----KRFTSPGRKKKGR 290
           KPK  AKP+            KTA K G   +P +N     K+FT PGRKKK R
Sbjct: 244 KPKKAAKPQARNTG------SKTAGKQGTSSKPKANAEPPKKKFTQPGRKKKKR 291



>UniRef100_B6XE97 Pseudouridine synthase n=1 Tax=Providencia
           alcalifaciens DSM 30120 RepID=B6XE97_9ENTR
          Length = 292

 Score =  447 bits (1149), Expect = e-124
 Identities = 227/291 (78%), Positives = 246/291 (84%), Gaps = 6/291 (2%)

Query: 4   DSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPRE 63
           +S+ RLNKYISESGICSRREADRYIEQG+VF+NGKRA IGDQV  GDVVKVNGQLIEPR 
Sbjct: 4   NSTTRLNKYISESGICSRREADRYIEQGHVFINGKRAGIGDQVSAGDVVKVNGQLIEPRN 63

Query: 64  AEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLV 123
            EDLVLIALNKPVGIVSTTE GE+DNIVD+VNHS R+FPIGRLDKDSQGLIFLTNHGDLV
Sbjct: 64  EEDLVLIALNKPVGIVSTTESGEKDNIVDYVNHSTRIFPIGRLDKDSQGLIFLTNHGDLV 123

Query: 124 NKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQ 183
           NKILRAGNDHEKEY+VTV+KP+T+EFIRGM AGVPILGT+TKKCKVKKEAPFVFRITLVQ
Sbjct: 124 NKILRAGNDHEKEYIVTVNKPVTDEFIRGMGAGVPILGTMTKKCKVKKEAPFVFRITLVQ 183

Query: 184 GLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEV 243
           GLNRQIRRM EHFGYEV KLER RIMNV L+GIP+GEWRDLTDDELI+LF LIE S S+V
Sbjct: 184 GLNRQIRRMTEHFGYEVTKLERVRIMNVRLTGIPVGEWRDLTDDELIELFNLIEKSESDV 243

Query: 244 KPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNG----KRFTSPGRKKKGR 290
           KPK  AKP+            K      +P  N     K+FT PGRKKK R
Sbjct: 244 KPKKAAKPQARASNNK--SSGKQGSGSQKPKVNAEPPKKKFTQPGRKKKKR 292



>UniRef100_UPI000197C091 hypothetical protein PROVRETT_00710 n=1
           Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C091
          Length = 289

 Score =  445 bits (1144), Expect = e-123
 Identities = 227/294 (77%), Positives = 245/294 (83%), Gaps = 17/294 (5%)

Query: 5   SSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREA 64
           SS RLNKYISESGICSRREADRYIEQGNVF+NGKRA IGDQV  GDVVKVNGQLIEPR  
Sbjct: 5   SSTRLNKYISESGICSRREADRYIEQGNVFINGKRAGIGDQVFSGDVVKVNGQLIEPRNE 64

Query: 65  EDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
           EDLVLIALNKPVGIVSTTE GE+DNIVD+VNHS R+FPIGRLDKDSQGLIFLTNHGDLVN
Sbjct: 65  EDLVLIALNKPVGIVSTTESGEKDNIVDYVNHSTRIFPIGRLDKDSQGLIFLTNHGDLVN 124

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRAGN HEKEYLVTV+KP+T+EFIRGM AGVPILGT+TKKCKVKKEAPFVFRITLVQG
Sbjct: 125 KILRAGNSHEKEYLVTVNKPVTDEFIRGMGAGVPILGTMTKKCKVKKEAPFVFRITLVQG 184

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVK 244
           LNRQIRRMCEHFG+EV KLER RIMNV L+GIP+GEWRDLTDDELI+LF ++E S S++K
Sbjct: 185 LNRQIRRMCEHFGFEVTKLERVRIMNVRLTGIPVGEWRDLTDDELIELFDMMEKSESDIK 244

Query: 245 PKA--------KAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           PK         K   K A   +P VK E             K+FT PGRKKK R
Sbjct: 245 PKKAQKSVSANKGNTKQASPSKPKVKTENPTR---------KKFTQPGRKKKKR 289



>UniRef100_A0KIR3 Pseudouridine synthase n=1 Tax=Aeromonas
           hydrophila subsp. hydrophila ATCC 7966
           RepID=A0KIR3_AERHH
          Length = 344

 Score =  441 bits (1135), Expect = e-122
 Identities = 225/290 (77%), Positives = 246/290 (84%), Gaps = 14/290 (4%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML D S+RLNKYISESGICSRREADR+IEQGNVF+NGKRA +GDQV  GD+VKVNGQ+IE
Sbjct: 1   MLADESMRLNKYISESGICSRREADRFIEQGNVFINGKRAGVGDQVFAGDLVKVNGQVIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PREA+ LV I LNKPVGIVSTTE GE+DNIVDFVNHS R+FPIGRLDKDSQGLIFLTNHG
Sbjct: 61  PREADSLVFIVLNKPVGIVSTTEAGEKDNIVDFVNHSTRIFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKP+T+EFIRGM AGVPILG VTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPVTDEFIRGMGAGVPILGAVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFG+EV KLER RIMNVSL G+P+GEWRDLTDDELI+LFKLIE+SS
Sbjct: 181 LVQGLNRQIRRMCEHFGFEVTKLERIRIMNVSLKGLPVGEWRDLTDDELIELFKLIEDSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           SEVKP AK     AG             +GG+P ++  +   P   KK R
Sbjct: 241 SEVKP-AKGGQAAAG-------------QGGKPKASAAQAGKPAPGKKPR 276



>UniRef100_UPI00005F96C5 COG1187: 16S rRNA uridine-516
           pseudouridylate synthase and related pseudouridylate
           synthases n=1 Tax=Yersinia frederiksenii ATCC 33641
           RepID=UPI00005F96C5
          Length = 289

 Score =  438 bits (1127), Expect = e-121
 Identities = 218/289 (75%), Positives = 247/289 (85%)

Query: 2   LPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP 61
           + +SS+RLNKYISESGICSRR+ADRYIEQGNVF+NGKRA IGDQV  GDVVKVNGQLI+ 
Sbjct: 1   MSNSSIRLNKYISESGICSRRDADRYIEQGNVFINGKRAVIGDQVYAGDVVKVNGQLIDA 60

Query: 62  REAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGD 121
           R+ +DLVLI LNKPVGI+STTED E +NIVDFVNHSKR+FPIGRLDKDSQGLIFLTN GD
Sbjct: 61  RDEDDLVLIVLNKPVGIISTTEDSEHNNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNQGD 120

Query: 122 LVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITL 181
           LVNK+LRAGNDHEKEY+VTV+KP+TEEFI G+ AGVP+LGTVTKKCKVKK + FVF ITL
Sbjct: 121 LVNKVLRAGNDHEKEYVVTVNKPVTEEFILGLGAGVPMLGTVTKKCKVKKVSTFVFNITL 180

Query: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS 241
           VQGLNRQIRRMC++FGYEV KLERTRIMN++L G+PLGEWRDL DDELI LFKLIENSSS
Sbjct: 181 VQGLNRQIRRMCQYFGYEVTKLERTRIMNINLKGLPLGEWRDLNDDELIGLFKLIENSSS 240

Query: 242 EVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           E K   K + K+   K+      K AEK    +++ KRF  PGRKKKGR
Sbjct: 241 EGKTAKKVQTKSVTHKKTNSNGPKKAEKPDGNSASRKRFAQPGRKKKGR 289



>UniRef100_A4SPC7 Pseudouridine synthase n=1 Tax=Aeromonas
           salmonicida subsp. salmonicida A449 RepID=A4SPC7_AERS4
          Length = 344

 Score =  436 bits (1121), Expect = e-120
 Identities = 225/288 (78%), Positives = 244/288 (84%), Gaps = 13/288 (4%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML + S+RLNKYISESGICSRREADR+IEQG VF+NGKRA IGDQV  GD+VKVNGQ+IE
Sbjct: 1   MLANESMRLNKYISESGICSRREADRFIEQGQVFINGKRAGIGDQVFAGDLVKVNGQVIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            REA+ LV I LNKPVGIVSTTE GE+DNIVDFVNHS RVFPIGRLDKDSQGLIFLTNHG
Sbjct: 61  AREADSLVFIVLNKPVGIVSTTEAGEKDNIVDFVNHSTRVFPIGRLDKDSQGLIFLTNHG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLVTVDKP+T++FI+GM AGVPILG VTKKCKVKKEAPFVFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVTVDKPVTDDFIKGMGAGVPILGAVTKKCKVKKEAPFVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFG+EV KLER RIMNVSL G+P+GEWRDLTDDELI+LFKLIE+SS
Sbjct: 181 LVQGLNRQIRRMCEHFGFEVTKLERIRIMNVSLKGLPVGEWRDLTDDELIELFKLIEDSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTA-----------EKGGRPASNG 277
           SEVKP    KPK A  K  V +  K A           E GGRP  +G
Sbjct: 241 SEVKPAKGDKPKVA--KAAVAQTGKAAQGKKPRRDDDHEIGGRPNVSG 286



>UniRef100_C0AUH3 Putative uncharacterized protein n=1 Tax=Proteus
           penneri ATCC 35198 RepID=C0AUH3_9ENTR
          Length = 303

 Score =  424 bits (1089), Expect = e-117
 Identities = 219/294 (74%), Positives = 241/294 (81%), Gaps = 15/294 (5%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           S RLNKYISESGICSRREADRYIEQG V +NGKRA+IGDQV  GD VKVNG+LIE ++  
Sbjct: 16  STRLNKYISESGICSRREADRYIEQGLVLINGKRASIGDQVFAGDEVKVNGRLIEAQDNS 75

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           +LVLIALNKPVGIVSTT+DGE+DNIVD+VNHS R+FPIGRLDKDSQGLIFLTNHGDLVNK
Sbjct: 76  ELVLIALNKPVGIVSTTDDGEKDNIVDYVNHSTRIFPIGRLDKDSQGLIFLTNHGDLVNK 135

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRAGNDHEKEYLVTV+KPIT+EFI GM AGVPI+G  TKKCKVKKEAP VFRITLVQGL
Sbjct: 136 ILRAGNDHEKEYLVTVNKPITDEFIHGMGAGVPIMGQKTKKCKVKKEAPMVFRITLVQGL 195

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKP 245
           NRQIRRMCE+FGYEV KLER RIMNVSLSG+P+GEWRDLTDDELI LF  IE S+SE  P
Sbjct: 196 NRQIRRMCEYFGYEVTKLERVRIMNVSLSGLPVGEWRDLTDDELIKLFDAIEKSTSEAPP 255

Query: 246 KAK---------AKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           KAK         +  K  GI  P  K ++T        ++ KRF  PGRKKK R
Sbjct: 256 KAKQNKPKKQISSNAKALGIHIPQTKTKETEN------NSRKRFAQPGRKKKKR 303



>UniRef100_B4EZB2 Pseudouridine synthase n=2 Tax=Proteus mirabilis
           RepID=B4EZB2_PROMH
          Length = 292

 Score =  414 bits (1065), Expect = e-114
 Identities = 217/293 (74%), Positives = 237/293 (80%), Gaps = 14/293 (4%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           S RLNKYISESGICSRREADRYIEQG V +NGKRA IGD+V  GD VKVNG+LIE ++  
Sbjct: 6   STRLNKYISESGICSRREADRYIEQGLVLINGKRAGIGDRVTAGDEVKVNGRLIEAQDNS 65

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           +LVLIALNKPVGIVSTT++GE+DNIVD+VNHS RVFPIGRLDKDSQGLIFLTNHGDLVNK
Sbjct: 66  ELVLIALNKPVGIVSTTDEGEKDNIVDYVNHSTRVFPIGRLDKDSQGLIFLTNHGDLVNK 125

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRAGN HEKEYLVTVDKPIT+EFIRGM AGVPILG  TKKCKVKKEA  VFRITLVQGL
Sbjct: 126 ILRAGNSHEKEYLVTVDKPITDEFIRGMGAGVPILGQKTKKCKVKKEAAMVFRITLVQGL 185

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKP 245
           NRQIRRMCE+FGYEV KLER RIMNVSL+G+P+GEWRDLTDDELI LF  IE SSSE   
Sbjct: 186 NRQIRRMCEYFGYEVTKLERIRIMNVSLAGLPVGEWRDLTDDELIKLFDAIEASSSEAPK 245

Query: 246 KAKAKP--------KTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           + + KP        K  GI  P  K ++T        +  KRF  PGRKKK R
Sbjct: 246 QKQNKPKKQISSNAKALGIHIPKTKAKETEN------NTRKRFAQPGRKKKKR 292



>UniRef100_Q12NE4 Pseudouridine synthase n=1 Tax=Shewanella
           denitrificans OS217 RepID=Q12NE4_SHEDO
          Length = 309

 Score =  389 bits (999), Expect = e-106
 Identities = 202/306 (66%), Positives = 237/306 (77%), Gaps = 19/306 (6%)

Query: 2   LPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP 61
           + DS++RLNKYISESGICSRR+ADRY+EQGNVF+NG+RA +GD V  GD VKVNGQ IEP
Sbjct: 1   MTDSAIRLNKYISESGICSRRDADRYVEQGNVFINGRRAQVGDLVSIGDKVKVNGQDIEP 60

Query: 62  REAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGD 121
           R+AE+LV IALNKPVGIVSTTE  ERDNIVDFVNHS R+FPIGRLDKDSQGLIFLTN+GD
Sbjct: 61  RDAENLVFIALNKPVGIVSTTEGSERDNIVDFVNHSSRIFPIGRLDKDSQGLIFLTNNGD 120

Query: 122 LVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITL 181
           LVNKILRAGN+H+KEY+VTV+KPIT++FI+GM AGVPILG VTKKC V++ +PF F+I L
Sbjct: 121 LVNKILRAGNNHDKEYVVTVNKPITDDFIKGMGAGVPILGVVTKKCVVEQVSPFAFKIVL 180

Query: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS 241
           VQGLNRQIRRMCE+FG+EV KLER +IMNVSL G+P+GEWRDL   EL  LF +I++SSS
Sbjct: 181 VQGLNRQIRRMCEYFGFEVTKLERQQIMNVSLKGLPIGEWRDLDKQELDVLFDMIKDSSS 240

Query: 242 E-----VKPKAKAKPKTAGIKRPVVKME-------KTAEKG-------GRPASNGKRFTS 282
           E      K K K KPK A ++  +   E        T  KG       G+    GK    
Sbjct: 241 EDKNAAAKKKPKPKPKVASLRDKIEGPEHFMQHNRSTKHKGQAKGQPKGQTKGQGKGKPG 300

Query: 283 PGRKKK 288
            GRK K
Sbjct: 301 GGRKPK 306



>UniRef100_Q1N598 Pseudouridine synthase n=1 Tax=Bermanella
           marisrubri RepID=Q1N598_9GAMM
          Length = 376

 Score =  388 bits (997), Expect = e-106
 Identities = 200/301 (66%), Positives = 226/301 (75%), Gaps = 15/301 (4%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           ML DS+ RLNKYISESGICSRREADRYIEQGNV++NGKRA +GD+V PGD VKVNGQ+IE
Sbjct: 1   MLNDSTTRLNKYISESGICSRREADRYIEQGNVYINGKRAEVGDRVAPGDTVKVNGQIIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           P+E ED V IALNKPVGIVSTTE  ER+NIV FV HS R+FPIGRLDKDSQGLIFLTN+G
Sbjct: 61  PQEPEDFVFIALNKPVGIVSTTESSERNNIVRFVGHSTRIFPIGRLDKDSQGLIFLTNNG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGNDHEKEYLV V+KPI + FI GM+ GVPILGT+TKKCKVKKE+P VFRIT
Sbjct: 121 DLVNKILRAGNDHEKEYLVEVNKPIRDNFIEGMANGVPILGTMTKKCKVKKESPTVFRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LV+GLNRQIRRMCE+FGY+V  LER RIMNV L G+  G+WRDLT  EL  +F  I++SS
Sbjct: 181 LVEGLNRQIRRMCEYFGYDVVALERVRIMNVDLKGLATGDWRDLTQKELNGIFDAIKDSS 240

Query: 241 SEVKPKAKAKPKTAG---------------IKRPVVKMEKTAEKGGRPASNGKRFTSPGR 285
           SE     K   K  G                K+P  K  K+  K G P    K   +P  
Sbjct: 241 SEAPAGRKTTQKRGGKPGGSGQNKPGNKTNSKKPAAKASKSGPKRGGPHKAKKTSGNPNT 300

Query: 286 K 286
           K
Sbjct: 301 K 301



>UniRef100_A1U7B5 Pseudouridine synthase n=1 Tax=Marinobacter
           aquaeolei VT8 RepID=A1U7B5_MARAV
          Length = 332

 Score =  387 bits (995), Expect = e-106
 Identities = 195/286 (68%), Positives = 229/286 (80%), Gaps = 4/286 (1%)

Query: 5   SSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREA 64
           +S RLNKYISESG+CSRR+ADR+IEQGNV +NG+RA +GDQV PGDVVKVNGQ++EPR+ 
Sbjct: 5   TSTRLNKYISESGMCSRRDADRFIEQGNVHINGRRAQVGDQVLPGDVVKVNGQVVEPRDE 64

Query: 65  EDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
           EDLV IALNKPVGIVSTT+  E+DNI  FV HS+R+FPIGRLDKDSQGLIFLT++GDLVN
Sbjct: 65  EDLVFIALNKPVGIVSTTDSAEKDNIQRFVGHSERIFPIGRLDKDSQGLIFLTSNGDLVN 124

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRAGN+HEKEYLVTVDKP+T EF+ GMS GVPILGT+TK+CKV+K + FVFRITLVQG
Sbjct: 125 KILRAGNNHEKEYLVTVDKPVTREFVEGMSNGVPILGTMTKRCKVEKVSRFVFRITLVQG 184

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVK 244
           LNRQIRRM E+FGYEV +LER RIMNVSL G+P+G WRDLT+ EL  LF  I +SSSE  
Sbjct: 185 LNRQIRRMAEYFGYEVARLERVRIMNVSLQGLPVGAWRDLTEKELAVLFDAIRDSSSEAT 244

Query: 245 PKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
             A +KP+    K+P          GG+PA  G +        KGR
Sbjct: 245 EPAGSKPR----KKPAGARGARPGPGGKPARAGAKAGGKSPAGKGR 286



>UniRef100_A6F4D4 Pseudouridine synthase n=1 Tax=Marinobacter
           algicola DG893 RepID=A6F4D4_9ALTE
          Length = 318

 Score =  387 bits (993), Expect = e-106
 Identities = 194/284 (68%), Positives = 226/284 (79%), Gaps = 3/284 (1%)

Query: 5   SSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREA 64
           +S RLNKYISESG+CSRREADRYIE GNV +NGK A +GDQV PGD V VNGQLIEPR+ 
Sbjct: 5   NSTRLNKYISESGMCSRREADRYIENGNVAINGKAAQVGDQVLPGDKVTVNGQLIEPRDE 64

Query: 65  EDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
           EDL+ IALNKPVG+VSTT+  ER NIV+ V H +R+FPIGRLDKDSQGLIFLT++GDLVN
Sbjct: 65  EDLIFIALNKPVGVVSTTDPAERRNIVNHVGHGERIFPIGRLDKDSQGLIFLTSNGDLVN 124

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRAGN+HEKEYLVTV+KP+T EF++GMSAGVPILGTVTK+CKV+K + FVFRITLVQG
Sbjct: 125 KILRAGNNHEKEYLVTVNKPVTTEFVQGMSAGVPILGTVTKRCKVEKVSRFVFRITLVQG 184

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVK 244
           LNRQIRRMCE FGYEV KLER RIMN+SL G+ +GEWRDL   EL  LF +I +SSSEV 
Sbjct: 185 LNRQIRRMCEFFGYEVTKLERVRIMNISLKGLSVGEWRDLGPKELAGLFDMIRDSSSEVS 244

Query: 245 PKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKK 288
           P  +++ K   +KRP    +K       P   G +   PGR  K
Sbjct: 245 PDNRSETKKPAVKRP---SKKPGASPSGPRGKGAKTGQPGRPGK 285



>UniRef100_Q087V2 Pseudouridine synthase n=1 Tax=Shewanella
           frigidimarina NCIMB 400 RepID=Q087V2_SHEFN
          Length = 293

 Score =  385 bits (989), Expect = e-105
 Identities = 204/293 (69%), Positives = 236/293 (80%), Gaps = 7/293 (2%)

Query: 2   LPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP 61
           + +S+ RLNKYISESGICSRREADRYIEQGNVF+NGKRA IGD V+ GD VKVNG  I P
Sbjct: 1   MSESATRLNKYISESGICSRREADRYIEQGNVFINGKRAKIGDSVEFGDKVKVNGHDIAP 60

Query: 62  REAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGD 121
           R+  DLV IALNKPVGIVSTTE+ ERDNIVDFVNHS+RVFPIGRLDKDSQGLIFLT++GD
Sbjct: 61  RDEADLVFIALNKPVGIVSTTENTERDNIVDFVNHSERVFPIGRLDKDSQGLIFLTSNGD 120

Query: 122 LVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITL 181
           LVNKILRAGN+H+KEY+VTV+KPITE F++GM AGVP+LG +TKKCKV++ + FVF+I L
Sbjct: 121 LVNKILRAGNNHDKEYVVTVNKPITEAFLQGMRAGVPMLGVITKKCKVEQVSTFVFKIIL 180

Query: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS 241
           VQGLNRQIRRMCEHF +EV KLER  IMNVSL G+P+GEWRDL + EL  L KLIE+SSS
Sbjct: 181 VQGLNRQIRRMCEHFNFEVTKLERQSIMNVSLKGLPVGEWRDLDEQELSTLMKLIEHSSS 240

Query: 242 EVK---PKAKAKPKTA---GIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKK 288
           EVK    KAK KP  +    I+ P   M+    K  +PA+N K   S  RK K
Sbjct: 241 EVKNAPKKAKKKPTQSLRDKIEGPEHFMQGRGAKPKKPAAN-KGKPSHSRKPK 292



>UniRef100_Q4FTF0 Pseudouridine synthase n=1 Tax=Psychrobacter
           arcticus 273-4 RepID=Q4FTF0_PSYA2
          Length = 332

 Score =  384 bits (986), Expect = e-105
 Identities = 204/312 (65%), Positives = 231/312 (74%), Gaps = 27/312 (8%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M   SS RLNKYISESGICSRR+ADR+IEQGNV+LNGKRA +GDQV  GD VKVNGQLIE
Sbjct: 1   MFNASSTRLNKYISESGICSRRDADRFIEQGNVYLNGKRAAVGDQVVAGDTVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           P+EA+D V I LNKPVGIVSTTE  E++NIVDFV HS R+FPIGRLDKDSQGLIFLTN+G
Sbjct: 61  PKEADDFVFIVLNKPVGIVSTTESSEKNNIVDFVRHSVRIFPIGRLDKDSQGLIFLTNNG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNK+LRAGN+HEK+Y+VTV+KPIT+ FI G++ GVP+LG +TKKC V K AP VF IT
Sbjct: 121 DLVNKVLRAGNNHEKDYVVTVNKPITDSFIEGLAGGVPMLGKMTKKCPVTKVAPNVFNIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEV KLERTRIMNVSL G P+G+WRDLT  EL  L K IE+SS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVVKLERTRIMNVSLKGTPVGDWRDLTPQELSVLLKSIEDSS 240

Query: 241 SE---------------------VKPKAKAKPKTA---GIKRPVVKMEKTAEKGG---RP 273
           SE                      KPK  +KPK A     K P     K A   G   RP
Sbjct: 241 SESSTPAKKSRNTPRKNARTDTSEKPKVSSKPKGAAKGNAKHPKDGARKPAGSKGKDWRP 300

Query: 274 ASNGKRFTSPGR 285
            S+GK+    G+
Sbjct: 301 FSDGKKSGGKGK 312



>UniRef100_A6VZH0 Pseudouridine synthase n=1 Tax=Marinomonas sp.
           MWYL1 RepID=A6VZH0_MARMS
          Length = 355

 Score =  384 bits (986), Expect = e-105
 Identities = 199/298 (66%), Positives = 231/298 (77%), Gaps = 9/298 (3%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M   SS RLNKYISESGICSRR+ADR+IEQGNVF+NGKRA++GDQV  GD V+VNGQ+IE
Sbjct: 1   MFNASSTRLNKYISESGICSRRDADRFIEQGNVFINGKRASVGDQVVAGDTVRVNGQIIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           P++A+D V I LNKPVGIVSTTE  E++NIVDFV+H  R+FPIGRLDKDSQGLIFLTN+G
Sbjct: 61  PQDADDFVFIVLNKPVGIVSTTESSEKNNIVDFVSHGVRIFPIGRLDKDSQGLIFLTNNG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNK+LRAGN+HEKEYLVTV+KPIT++FI G++ GVPILGT+TKKC V K +P VF IT
Sbjct: 121 DLVNKVLRAGNNHEKEYLVTVNKPITDDFIAGLAGGVPILGTMTKKCPVTKVSPTVFNIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCE+FGYEV KLERTRIMNVSL GIP+GEWRDLT  EL  L K IE+SS
Sbjct: 181 LVQGLNRQIRRMCEYFGYEVVKLERTRIMNVSLKGIPVGEWRDLTPKELSVLLKSIEDSS 240

Query: 241 SEVKPKAK-------AKPKTAGIKRPVV--KMEKTAEKGGRPASNGKRFTSPGRKKKG 289
           SE    AK          +T G  +P V  K +  ++  G    N K      RK  G
Sbjct: 241 SEASAPAKKSRNAPRKNTRTDGSSKPKVSSKPKAPSKPMGAAKGNTKHPKDDARKPAG 298



>UniRef100_A6EBK9 Pseudouridine synthase n=1 Tax=Pedobacter sp.
           BAL39 RepID=A6EBK9_9SPHI
          Length = 329

 Score =  383 bits (983), Expect = e-104
 Identities = 191/289 (66%), Positives = 230/289 (79%), Gaps = 6/289 (2%)

Query: 2   LPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP 61
           + D + RLNKYISESG+CSRR ADRYIEQGNV++NGK+A +GD+V  GD+V VNGQ IEP
Sbjct: 1   MSDPTTRLNKYISESGLCSRRAADRYIEQGNVYINGKKAKVGDKVFFGDLVMVNGQTIEP 60

Query: 62  REAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGD 121
           +E E  VLIA NKPVGI STTE G + NIVD VNHS+RVFPIGRLDKDSQGLIFLTN+GD
Sbjct: 61  KEVEHSVLIAYNKPVGITSTTEAGVKGNIVDHVNHSERVFPIGRLDKDSQGLIFLTNNGD 120

Query: 122 LVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITL 181
           LVNKILRAGN+HEKEYLVTV+KP+TE+FI  MS GVPILG +TKKCKV KE+PFVF+ITL
Sbjct: 121 LVNKILRAGNNHEKEYLVTVNKPLTEQFITNMSKGVPILGIMTKKCKVTKESPFVFKITL 180

Query: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS 241
           +QGLNRQIRRMCEHFG+EV KLERTRIMN+ L GIPLGEWR+LT +E  D++ ++  SSS
Sbjct: 181 IQGLNRQIRRMCEHFGFEVTKLERTRIMNIGLKGIPLGEWRELTAEEQTDIYNMVAKSSS 240

Query: 242 ----EVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRK 286
                   K+  KP+    ++PV + + +   G +P++ GK    P RK
Sbjct: 241 LEAASAPKKSAKKPEQELTEKPVARKKNSRPAGAKPSAAGK--ARPERK 287



>UniRef100_Q1QCB4 Pseudouridine synthase n=1 Tax=Psychrobacter
           cryohalolentis K5 RepID=Q1QCB4_PSYCK
          Length = 328

 Score =  379 bits (973), Expect = e-103
 Identities = 195/290 (67%), Positives = 226/290 (77%), Gaps = 4/290 (1%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M   SS RLNKYISESGICSRR+ADR+IEQGNV+LNGKRA +GDQV  GD VKVNGQLIE
Sbjct: 1   MFNASSTRLNKYISESGICSRRDADRFIEQGNVYLNGKRAAVGDQVVAGDTVKVNGQLIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           P+EA+D V I LNKPVGIVSTTE  E++NIVDFV HS R+FPIGRLDKDSQGLIFLT++G
Sbjct: 61  PKEADDFVFIVLNKPVGIVSTTESSEKNNIVDFVRHSVRIFPIGRLDKDSQGLIFLTSNG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNK+LRAGN+HEKEYLVTV+KP+T+  I G++ GVP+LG +TKKC V K AP VF IT
Sbjct: 121 DLVNKVLRAGNNHEKEYLVTVNKPLTDSVIEGLAGGVPMLGKMTKKCPVTKVAPNVFNIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMCEHFGYEV KLERTRIMNVSL G P+G+WRDLT  EL  L K +E+SS
Sbjct: 181 LVQGLNRQIRRMCEHFGYEVVKLERTRIMNVSLKGTPVGDWRDLTPKELSVLLKSVEDSS 240

Query: 241 SEVKPKAKAKPKTAGIKRPVV---KMEKTAEKGGRPASNGKRFTSPGRKK 287
           S+    AK K + A  K P        K++ K    A   K+ +  G +K
Sbjct: 241 SQDSKPAK-KSRNAPRKNPRTDDSSKAKSSSKTAGAAKGNKKHSKDGARK 289



>UniRef100_A3Y9Q9 Pseudouridine synthase n=1 Tax=Marinomonas sp.
           MED121 RepID=A3Y9Q9_9GAMM
          Length = 376

 Score =  378 bits (971), Expect = e-103
 Identities = 198/297 (66%), Positives = 232/297 (78%), Gaps = 15/297 (5%)

Query: 5   SSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREA 64
           +S RLNKYISESG+CSRREADR+IEQGNVF+N KRA +GDQV PGDVV+VNG  IEP EA
Sbjct: 5   TSTRLNKYISESGMCSRREADRFIEQGNVFINKKRAEVGDQVNPGDVVRVNGAKIEPPEA 64

Query: 65  EDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
           EDLV IALNKPVGIVSTTE  E DN+V FVNHS R+FPIGRLDKDSQGLIFLT++GDLVN
Sbjct: 65  EDLVFIALNKPVGIVSTTEMEEPDNMVSFVNHSSRIFPIGRLDKDSQGLIFLTSNGDLVN 124

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRAGN+HEKEY+VTVDKP+TE+ I  M++GVP+LGT TKKCKV +EAP VFRI LVQG
Sbjct: 125 KILRAGNNHEKEYVVTVDKPLTEDAINTMASGVPMLGTKTKKCKVVQEAPNVFRIFLVQG 184

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVK 244
           LNRQIRRMCE  GY+V +LER RIMN+SL G+P+G+WRDLT+ E+ +L K+IE+SSSE  
Sbjct: 185 LNRQIRRMCEFCGYQVTELERVRIMNISLKGLPVGDWRDLTEKEMTELSKMIEHSSSEDT 244

Query: 245 PKAK---AKPKTAG---------IKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKG 289
            K K   AK K+ G          K    +  K   +  +PAS GK   S GR + G
Sbjct: 245 SKQKPAPAKAKSKGRSNSKSFSKSKAQAAESRKEKSQSSKPASKGK---SDGRSRPG 298



>UniRef100_C1Z0A2 Ribosomal large subunit pseudouridine synthase F
           n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C1Z0A2_PEDHE
          Length = 348

 Score =  373 bits (957), Expect = e-101
 Identities = 186/287 (64%), Positives = 226/287 (78%), Gaps = 5/287 (1%)

Query: 2   LPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP 61
           + DS+ RLNKYISESG+CSRR ADRYIEQGNV++NGK+A +GD+V  GD+V VNGQ I+P
Sbjct: 1   MSDSTTRLNKYISESGLCSRRAADRYIEQGNVYINGKKAKVGDKVFFGDIVTVNGQTIDP 60

Query: 62  REAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGD 121
           +E E+ VLIA NKPVGI STTE G + NIVD VNHS+RVFPIGRLDKDSQGLIFLTN+GD
Sbjct: 61  KEVENSVLIAYNKPVGITSTTEAGVKGNIVDHVNHSERVFPIGRLDKDSQGLIFLTNNGD 120

Query: 122 LVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITL 181
           LVNKILRAGN+HEKEY+VTV+KP+T++FI GM+ GVP+LG +TKKCKV KE+P +F+ITL
Sbjct: 121 LVNKILRAGNNHEKEYVVTVNKPLTDQFITGMAKGVPVLGVMTKKCKVVKESPLIFKITL 180

Query: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS 241
           +QGLNRQIRRMCE+FGYEV KLER RIMN+ L GIPLGEWR+LT +EL  +F ++  SS+
Sbjct: 181 IQGLNRQIRRMCEYFGYEVTKLERVRIMNIPLKGIPLGEWRELTPEELTGIFNMVAKSSA 240

Query: 242 EVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKK 288
           E    A A PK    K+P    E+   +   P  +  R   P  K K
Sbjct: 241 E----ADATPKRVS-KKPKTPKEEDFLENVTPGRSSGRNAKPKSKGK 282



>UniRef100_A3JFV8 Pseudouridine synthase n=1 Tax=Marinobacter sp.
           ELB17 RepID=A3JFV8_9ALTE
          Length = 317

 Score =  370 bits (951), Expect = e-101
 Identities = 194/292 (66%), Positives = 222/292 (76%), Gaps = 8/292 (2%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M   SS RLNKYISESGICSRREADRYIEQGNV +NGKRA++GDQV P D V VNGQ+IE
Sbjct: 1   MTQSSSTRLNKYISESGICSRREADRYIEQGNVRINGKRASVGDQVLPTDTVMVNGQIIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PR  ED V IALNKPVGIVSTT+  ERDNI  FV H+ R+FPIGRLDKDSQGLIF+T++G
Sbjct: 61  PRAEEDQVFIALNKPVGIVSTTDSAERDNIQRFVGHTVRIFPIGRLDKDSQGLIFMTSNG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           DLVNKILRAGN+HEKEYLVTVDKPIT+ FI GM+ GVPILGTVTKKC+V +E+ FVFRI 
Sbjct: 121 DLVNKILRAGNNHEKEYLVTVDKPITKTFIDGMAGGVPILGTVTKKCRVSQESRFVFRIV 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRM EHFG++V +LER RIMN+SL  +P+G+WRDLT  EL  L   I +SS
Sbjct: 181 LVQGLNRQIRRMAEHFGFDVTRLERQRIMNISLGNLPVGQWRDLTSKELAVLMDSIRDSS 240

Query: 241 SEVKPKAKAKP--KTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           S+  P A  KP  KT     P  K E       +P +  K    PG K  G+
Sbjct: 241 SDA-PAAPQKPAGKTKPANAPAQKRE-----SHKPRAGNKTPPRPGAKSAGQ 286



>UniRef100_A0YGV0 Pseudouridine synthase n=1 Tax=marine gamma
           proteobacterium HTCC2143 RepID=A0YGV0_9GAMM
          Length = 307

 Score =  369 bits (946), Expect = e-100
 Identities = 178/273 (65%), Positives = 219/273 (80%)

Query: 5   SSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREA 64
           ++ RLNKYISESGICSRREADR++E+G+VF+NGKRA +GDQV  GD VKVNGQ+I+PR+ 
Sbjct: 5   TTTRLNKYISESGICSRREADRFVEKGSVFINGKRAKVGDQVSAGDTVKVNGQIIDPRDE 64

Query: 65  EDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
           E LVLIALNKPVG+V TTE  E++NIVD+VNH +R+FPIGRLDKDSQGLIFLTN+GDLVN
Sbjct: 65  ERLVLIALNKPVGVVCTTEGSEKNNIVDYVNHGERIFPIGRLDKDSQGLIFLTNNGDLVN 124

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRAGN HEKEYLVTVDKPIT+ FIR M+ GVPILG VT+KCK+ KE P +FRITLVQG
Sbjct: 125 KILRAGNRHEKEYLVTVDKPITDTFIRDMAKGVPILGEVTRKCKIVKETPTLFRITLVQG 184

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVK 244
           LNRQIRRMC+HFGY++ +LER RIMNVS+ G+ +GEWRD + +EL  + +   +S S   
Sbjct: 185 LNRQIRRMCDHFGYDIVRLERVRIMNVSMKGLGVGEWRDFSQNELAGILESTADSQSAAA 244

Query: 245 PKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNG 277
           P  K KP   G +    +  K+A    + + +G
Sbjct: 245 PSKKRKPAKTGDRPWYPEKPKSAYSSRKKSPSG 277



>UniRef100_A8GHU2 Pseudouridine synthase n=1 Tax=Serratia
           proteamaculans 568 RepID=A8GHU2_SERP5
          Length = 266

 Score =  349 bits (896), Expect = 1e-94
 Identities = 173/242 (71%), Positives = 205/242 (84%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M   SS+RLNKYIS+SGICSRR+ADRYI+ G VF+N  +A +G  V  GDVV VNGQ IE
Sbjct: 1   MPTQSSIRLNKYISDSGICSRRQADRYIKLGKVFINDNQAEVGAPVFIGDVVSVNGQRIE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           PR   DLVLIALNKPVGI+++      +NI DFVNHS+R FP+GRLDKDSQGLIFLTN G
Sbjct: 61  PRNDADLVLIALNKPVGIITSMGKHVPNNIGDFVNHSQRTFPVGRLDKDSQGLIFLTNRG 120

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           +LVNKILRAGN+H+KEYLVTVDKP+T+EFI+GM AGVPILG VT KC+V++EAP V RIT
Sbjct: 121 ELVNKILRAGNNHQKEYLVTVDKPLTDEFIQGMGAGVPILGKVTHKCQVEQEAPQVLRIT 180

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LVQGLNRQIRRMC++FGY+V KLER RIMN+SL G+ LGEWRDL++DE  +LFKL+E+SS
Sbjct: 181 LVQGLNRQIRRMCKYFGYQVTKLERVRIMNISLQGLALGEWRDLSEDERTELFKLLEHSS 240

Query: 241 SE 242
           SE
Sbjct: 241 SE 242



>UniRef100_Q8XI11 Pseudouridine synthase n=1 Tax=Clostridium
           perfringens RepID=Q8XI11_CLOPE
          Length = 301

 Score =  317 bits (811), Expect = 1e-84
 Identities = 160/234 (68%), Positives = 189/234 (80%), Gaps = 2/234 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNKYISE+G CSRREAD+ IEQG V ++G +AT G +V  G  V ++G+ ++     +
Sbjct: 63  VRLNKYISETGFCSRREADKLIEQGRVKIDGVKATTGMKVSNGQSVSIDGKSLKVEN--E 120

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           LV IALNKPVGI  TTE   + NIVDF+NH KR+FPIGRLDKDSQGLIF+TN GD+VNKI
Sbjct: 121 LVYIALNKPVGITCTTESKIKGNIVDFINHEKRIFPIGRLDKDSQGLIFMTNDGDIVNKI 180

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN+HEKEY+VTV+KPIT+EFI+GMS GVPILGTVTKKC VKKE+   FRI L QGLN
Sbjct: 181 LRAGNNHEKEYIVTVNKPITDEFIKGMSNGVPILGTVTKKCLVKKESKNSFRIILTQGLN 240

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           RQIRRMCE+FGYEVKKLER RIMNVSL  + +G WR LT  EL ++ +L ENSS
Sbjct: 241 RQIRRMCEYFGYEVKKLERIRIMNVSLGNLKMGSWRYLTKKELAEINRLTENSS 294



>UniRef100_B1V3B9 Pseudouridine synthase n=1 Tax=Clostridium
           perfringens D str. JGS1721 RepID=B1V3B9_CLOPE
          Length = 298

 Score =  317 bits (811), Expect = 1e-84
 Identities = 160/234 (68%), Positives = 189/234 (80%), Gaps = 2/234 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNKYISE+G CSRREAD+ IEQG V ++G +AT G +V  G  V ++G+ ++     +
Sbjct: 60  VRLNKYISETGFCSRREADKLIEQGRVKIDGLKATTGMKVSKGQSVSIDGKPLKVEN--E 117

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           LV IALNKPVGI  TTE   + NIVDF+NH KR+FPIGRLDKDSQGLIF+TN GD+VNKI
Sbjct: 118 LVYIALNKPVGITCTTESKIKGNIVDFINHEKRIFPIGRLDKDSQGLIFMTNDGDIVNKI 177

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN+HEKEY+VTV+KPIT+EFI+GMS GVPILGTVTKKC VKKE+   FRI L QGLN
Sbjct: 178 LRAGNNHEKEYIVTVNKPITDEFIKGMSNGVPILGTVTKKCLVKKESKNSFRIILTQGLN 237

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           RQIRRMCE+FGYEVKKLER RIMNVSL  + +G WR LT  EL ++ +L ENSS
Sbjct: 238 RQIRRMCEYFGYEVKKLERIRIMNVSLGNLKMGSWRYLTKKELAEINRLTENSS 291



>UniRef100_B1BMR9 Pseudouridine synthase n=2 Tax=Clostridium
           perfringens RepID=B1BMR9_CLOPE
          Length = 301

 Score =  316 bits (810), Expect = 1e-84
 Identities = 160/234 (68%), Positives = 189/234 (80%), Gaps = 2/234 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNKYISE+G CSRREAD+ IEQG V ++G +AT G +V  G  V ++G+ ++     +
Sbjct: 63  VRLNKYISETGFCSRREADKLIEQGRVKIDGVKATTGMKVSNGQSVSIDGKPLKVEN--E 120

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           LV IALNKPVGI  TTE   + NIVDF+NH KR+FPIGRLDKDSQGLIF+TN GD+VNKI
Sbjct: 121 LVYIALNKPVGITCTTESKIKGNIVDFINHEKRIFPIGRLDKDSQGLIFMTNDGDIVNKI 180

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN+HEKEY+VTV+KPIT+EFI+GMS GVPILGTVTKKC VKKE+   FRI L QGLN
Sbjct: 181 LRAGNNHEKEYIVTVNKPITDEFIKGMSNGVPILGTVTKKCLVKKESKNSFRIILTQGLN 240

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           RQIRRMCE+FGYEVKKLER RIMNVSL  + +G WR LT  EL ++ +L ENSS
Sbjct: 241 RQIRRMCEYFGYEVKKLERIRIMNVSLGNLKMGSWRYLTKKELAEINRLTENSS 294



>UniRef100_B1RPB5 Pseudouridine synthase n=1 Tax=Clostridium
           perfringens NCTC 8239 RepID=B1RPB5_CLOPE
          Length = 298

 Score =  316 bits (809), Expect = 2e-84
 Identities = 160/234 (68%), Positives = 188/234 (80%), Gaps = 2/234 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNKYISE+G CSRREAD+ IEQG V ++G +AT G +V  G  V ++G+ ++     +
Sbjct: 60  VRLNKYISETGFCSRREADKLIEQGRVKIDGLKATTGMKVSKGQSVSIDGKPLKVEN--E 117

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           LV IALNKPVGI  TTE   + NIVDF+NH KR+FPIGRLDKDSQGLIF+TN GD+VNKI
Sbjct: 118 LVYIALNKPVGITCTTESKIKGNIVDFINHEKRIFPIGRLDKDSQGLIFMTNDGDIVNKI 177

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN+HEKEY+VTV+KPIT EFI+GMS GVPILGTVTKKC VKKE+   FRI L QGLN
Sbjct: 178 LRAGNNHEKEYIVTVNKPITHEFIKGMSNGVPILGTVTKKCLVKKESKNSFRIILTQGLN 237

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           RQIRRMCE+FGYEVKKLER RIMNVSL  + +G WR LT  EL ++ +L ENSS
Sbjct: 238 RQIRRMCEYFGYEVKKLERIRIMNVSLGNLKIGSWRYLTKKELAEINRLTENSS 291



>UniRef100_B1R7S1 Pseudouridine synthase n=1 Tax=Clostridium
           perfringens B str. ATCC 3626 RepID=B1R7S1_CLOPE
          Length = 298

 Score =  316 bits (809), Expect = 2e-84
 Identities = 160/234 (68%), Positives = 188/234 (80%), Gaps = 2/234 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNKYISE+G CSRREAD+ IEQG V ++G +AT G +V  G  V ++G+ ++     +
Sbjct: 60  VRLNKYISETGFCSRREADKLIEQGRVKIDGLKATTGMKVSKGQSVSIDGKPLKVEN--E 117

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           LV IALNKPVGI  TTE   + NIVDF+NH KR+FPIGRLDKDSQGLIF+TN GD+VNKI
Sbjct: 118 LVYIALNKPVGITCTTESKIKGNIVDFINHEKRIFPIGRLDKDSQGLIFMTNDGDIVNKI 177

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN+HEKEY+VTV+KPIT EFI+GMS GVPILGTVTKKC VKKE+   FRI L QGLN
Sbjct: 178 LRAGNNHEKEYIVTVNKPITHEFIKGMSNGVPILGTVTKKCLVKKESKNSFRIILTQGLN 237

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           RQIRRMCE+FGYEVKKLER RIMNVSL  + +G WR LT  EL ++ +L ENSS
Sbjct: 238 RQIRRMCEYFGYEVKKLERIRIMNVSLGNLKMGSWRYLTKKELAEINRLTENSS 291



>UniRef100_Q0SQN3 Pseudouridine synthase n=1 Tax=Clostridium
           perfringens SM101 RepID=Q0SQN3_CLOPS
          Length = 298

 Score =  314 bits (804), Expect = 7e-84
 Identities = 159/234 (67%), Positives = 188/234 (80%), Gaps = 2/234 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNKYISE+G CSRREAD+ IEQG V ++G +AT G +V  G  V ++G+ ++     +
Sbjct: 60  VRLNKYISETGFCSRREADKLIEQGRVKIDGVKATTGMKVSKGQSVFIDGKPLKVEN--E 117

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           LV I LNKPVGI  TTE   + NIVDF+NH KR+FPIGRLDKDSQGLIF+TN GD+VNKI
Sbjct: 118 LVYIVLNKPVGITCTTESKIKGNIVDFINHEKRIFPIGRLDKDSQGLIFMTNDGDIVNKI 177

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN+HEKEY+VTV+KPIT+EFI+GMS GVPILGTVTKKC VKKE+   FRI L QGLN
Sbjct: 178 LRAGNNHEKEYIVTVNKPITDEFIKGMSNGVPILGTVTKKCLVKKESKNSFRIILTQGLN 237

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           RQIRRMCE+FGYEVKKLER RIMNVSL  + +G WR LT  EL ++ +L ENSS
Sbjct: 238 RQIRRMCEYFGYEVKKLERIRIMNVSLGNLKIGSWRYLTKKELAEINRLTENSS 291



>UniRef100_Q0TMY7 Pseudouridine synthase n=2 Tax=Clostridium
           perfringens RepID=Q0TMY7_CLOP1
          Length = 298

 Score =  313 bits (803), Expect = 9e-84
 Identities = 159/234 (67%), Positives = 188/234 (80%), Gaps = 2/234 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNKYISE+G CSRREAD+ IEQG V ++G +AT G +V  G  V ++G+ ++     +
Sbjct: 60  VRLNKYISETGFCSRREADKLIEQGRVKIDGLKATTGMKVSKGQSVSIDGKPLKVEN--E 117

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           LV IALNKPVGI  TTE   + NIVDF+NH KR+FPIGRLDKDSQGLIF+TN GD+VNKI
Sbjct: 118 LVYIALNKPVGITCTTESKIKGNIVDFINHEKRIFPIGRLDKDSQGLIFMTNDGDIVNKI 177

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN+HEKEY+VTV+K IT+EFI+GMS GVPILGTVTKKC VKKE+   FRI L QGLN
Sbjct: 178 LRAGNNHEKEYIVTVNKSITDEFIKGMSNGVPILGTVTKKCLVKKESKNSFRIILTQGLN 237

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           RQIRRMCE+FGYEVKKLER RIMNVSL  + +G WR LT  EL ++ +L ENSS
Sbjct: 238 RQIRRMCEYFGYEVKKLERIRIMNVSLGNLKIGSWRYLTKKELAEINRLTENSS 291



>UniRef100_UPI000190A5CA 23S rRNA pseudouridine synthase F n=1
           Tax=Salmonella enterica subsp. enterica serovar Typhi
           str. 404ty RepID=UPI000190A5CA
          Length = 165

 Score =  302 bits (774), Expect = 2e-80
 Identities = 153/166 (92%), Positives = 158/166 (95%), Gaps = 1/166 (0%)

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRAGNDHEKEYLVTVDKPIT+EFIRGM AGVPILGTVTKKCKVKKEAPFVFRITLVQG
Sbjct: 1   KILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRITLVQG 60

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVK 244
           LNRQIRRMCE+FGYEV KLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE SSSE K
Sbjct: 61  LNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIEGSSSEAK 120

Query: 245 PKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           PKAKAKPKTAGIKRPVV +EK+ EK  RPAS+GKRFTSPGRKKKGR
Sbjct: 121 PKAKAKPKTAGIKRPVVAIEKSNEK-ARPASSGKRFTSPGRKKKGR 165



>UniRef100_A2U1D4 Pseudouridine synthase n=1 Tax=Polaribacter sp.
           MED152 RepID=A2U1D4_9FLAO
          Length = 302

 Score =  301 bits (772), Expect = 4e-80
 Identities = 157/284 (55%), Positives = 211/284 (74%), Gaps = 7/284 (2%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           S  LNKYIS SGICSRREA+++I++G V LNGK   +G++V   DVVK++G++++P++  
Sbjct: 14  STNLNKYISSSGICSRREAEKFIKEGRVTLNGKATQLGNRVTKKDVVKLDGRVVKPKDVT 73

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
             + IALNKPVGIVSTT+  E +NIV  +N+ +R+FPIGRLDK S+GLIFLTN GD+VNK
Sbjct: 74  --IYIALNKPVGIVSTTDGREPNNIVKHINYPERLFPIGRLDKPSEGLIFLTNDGDIVNK 131

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRAGN+HEKEY VTV+K ITE+FI  M  G+PILGTVT+KC V+K    +F+I L QGL
Sbjct: 132 ILRAGNNHEKEYFVTVNKSITEDFIEKMGNGIPILGTVTQKCLVEKVNDKIFKIILTQGL 191

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS-SEVK 244
           NRQIRRMCE+  YEV KL+RTRIMNV L  +  G+WR+LT++E+ ++ K+I  SS +E  
Sbjct: 192 NRQIRRMCEYLDYEVTKLKRTRIMNVELGYLQTGDWRELTEEEMNEINKMISTSSKTEEA 251

Query: 245 PKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKK 288
            K K KPK    K+P  K+  T     R +++ ++ +SP  K+K
Sbjct: 252 SKIKEKPKA---KKPKKKLAPTKNDFNRKSASFRK-SSPKNKRK 291



>UniRef100_A4BZD0 Pseudouridine synthase n=1 Tax=Polaribacter
           irgensii 23-P RepID=A4BZD0_9FLAO
          Length = 296

 Score =  297 bits (761), Expect = 7e-79
 Identities = 149/254 (58%), Positives = 195/254 (76%), Gaps = 3/254 (1%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           S+ LNKYIS SG+CSRREA+++I++G + +NGK   +G++V   DVVK +G+L+EP+   
Sbjct: 8   SINLNKYISSSGVCSRREAEKFIKEGRITINGKATQLGNRVGKKDVVKFDGRLVEPKNVT 67

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
             + IALNKPVGIVSTT++ E  NIV  VN+ +R+FPIGRLDK S+GLIFLTN GD+VNK
Sbjct: 68  --LYIALNKPVGIVSTTDEREPHNIVKHVNYPERLFPIGRLDKPSEGLIFLTNDGDIVNK 125

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRAGN+HEKEY V+VDK IT +FI  M  G+PILGT+TK+CKV+K +  +F+I L QGL
Sbjct: 126 ILRAGNNHEKEYFVSVDKSITNDFITSMGNGIPILGTMTKRCKVEKVSDKIFKIVLTQGL 185

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS-SEVK 244
           NRQIRRMCE+  YEV KL+RTRIMNV L  +  G+WR+LT++E+ D+ K+I  SS +E  
Sbjct: 186 NRQIRRMCEYLDYEVTKLKRTRIMNVDLGYLQSGDWRELTEEEMKDINKMIATSSKTEEA 245

Query: 245 PKAKAKPKTAGIKR 258
              + KPK A  KR
Sbjct: 246 SSIEEKPKQARPKR 259



>UniRef100_Q7MMX9 Pseudouridine synthase n=1 Tax=Vibrio vulnificus
           YJ016 RepID=Q7MMX9_VIBVY
          Length = 347

 Score =  296 bits (759), Expect = 1e-78
 Identities = 153/239 (64%), Positives = 178/239 (74%), Gaps = 2/239 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M  D++ RLNKYISE+G CSRREAD+ IEQG V +NGK+  +G +V PGD V V+G+ + 
Sbjct: 1   MSQDNAKRLNKYISETGFCSRREADKLIEQGRVTINGKQPEMGTKVLPGDDVCVDGKPVA 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            +E    V IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN G
Sbjct: 61  AKEKP--VYIALNKPTGITCTTERNIPGNIVDFIGHKKRIFPIGRLDKPSDGLIFLTNDG 118

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           D+VNKILRAGN HEKEY+V VDKPIT EFI+ MS+GV IL TVT  CKV +E  F FRI 
Sbjct: 119 DIVNKILRAGNHHEKEYVVRVDKPITPEFIKAMSSGVNILDTVTLPCKVTQETKFSFRIV 178

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
           L QGLNRQIRRMCE  GYEV KL R RIMN+SL GIP G+WR LTDDE+ ++  + E S
Sbjct: 179 LTQGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLTDDEVTEILAMCEGS 237



>UniRef100_Q8DFG6 Pseudouridine synthase n=1 Tax=Vibrio vulnificus
           RepID=Q8DFG6_VIBVU
          Length = 347

 Score =  296 bits (758), Expect = 1e-78
 Identities = 153/239 (64%), Positives = 178/239 (74%), Gaps = 2/239 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M  D++ RLNKYISE+G CSRREAD+ IEQG V +NGK+  +G +V PGD V V+G+ + 
Sbjct: 1   MSQDNAKRLNKYISETGFCSRREADKLIEQGRVTINGKQPEMGTKVLPGDDVCVDGKPVA 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            +E    V IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN G
Sbjct: 61  AKEKP--VYIALNKPTGITCTTERDIPGNIVDFIGHKKRIFPIGRLDKPSDGLIFLTNDG 118

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           D+VNKILRAGN HEKEY+V VDKPIT EFI+ MS+GV IL TVT  CKV +E  F FRI 
Sbjct: 119 DIVNKILRAGNHHEKEYVVRVDKPITPEFIKAMSSGVNILDTVTLPCKVTQETKFSFRIV 178

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
           L QGLNRQIRRMCE  GYEV KL R RIMN+SL GIP G+WR LTDDE+ ++  + E S
Sbjct: 179 LTQGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLTDDEVTEILAMCEGS 237



>UniRef100_A7MY75 Pseudouridine synthase n=1 Tax=Vibrio harveyi ATCC
           BAA-1116 RepID=A7MY75_VIBHB
          Length = 384

 Score =  295 bits (755), Expect = 3e-78
 Identities = 151/239 (63%), Positives = 179/239 (74%), Gaps = 2/239 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M  D++ RLNKYISE+G CSRREADR IEQG V +NG++  +G +V PGD V V+G  + 
Sbjct: 1   MSQDNAKRLNKYISETGFCSRREADRLIEQGRVTINGQQPEMGTKVLPGDDVCVDGSPVA 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            +E    + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN G
Sbjct: 61  AKEKP--IYIALNKPTGITCTTERDIPGNIVDFIGHKKRIFPIGRLDKPSDGLIFLTNDG 118

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           D+VNKILRAGN+HEKEY+V VDKPIT EF++ MS+GV IL TVT  CKV+KE  F FRI 
Sbjct: 119 DIVNKILRAGNNHEKEYVVRVDKPITGEFLKQMSSGVKILDTVTLPCKVEKETKFSFRIV 178

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
           L QGLNRQIRRMCE  GYEV KL R RIMN+SL GIP G+WR L+DDE+ ++  + E S
Sbjct: 179 LTQGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLSDDEVAEILAMCEGS 237



>UniRef100_A6FC27 Pseudouridine synthase n=1 Tax=Moritella sp. PE36
           RepID=A6FC27_9GAMM
          Length = 407

 Score =  294 bits (752), Expect = 7e-78
 Identities = 149/275 (54%), Positives = 195/275 (70%), Gaps = 13/275 (4%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNKYIS++G CSRREADR IEQG V +NGK   +G +V  GD+V VNG+ +  +E +  
Sbjct: 10  RLNKYISDTGYCSRREADRLIEQGRVTINGKIPEMGTKVSDGDMVSVNGRPV--KEKQKR 67

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     N++D +++S R+FPIGRLDK S+GLIFLTN GD+VNKIL
Sbjct: 68  IYIALNKPAGITCTTERHIHGNVIDLIDYSTRIFPIGRLDKPSEGLIFLTNDGDIVNKIL 127

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN HEKEY+V VD  +T++F+ GM+ GVPIL TVTK CKV +E  F F+I L QGLN+
Sbjct: 128 RAGNAHEKEYIVKVDSTVTDKFLTGMARGVPILDTVTKPCKVTREGRFEFKIILTQGLNQ 187

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS--EVKP 245
           QIRRMCEHFG++VK L RTRIMN+ + G+  G+WR LTD+E+ ++  ++E SSS  E   
Sbjct: 188 QIRRMCEHFGFQVKSLTRTRIMNIDIKGLATGQWRLLTDNEMAEINAMVEGSSSTEEASD 247

Query: 246 KAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRF 280
             + KPK  G         + +++G   A+  KRF
Sbjct: 248 YGQVKPKVKG---------QHSKRGVNSAARQKRF 273



>UniRef100_A7K6G9 Pseudouridine synthase n=1 Tax=Vibrio sp. Ex25
           RepID=A7K6G9_9VIBR
          Length = 385

 Score =  293 bits (751), Expect = 1e-77
 Identities = 150/239 (62%), Positives = 177/239 (74%), Gaps = 2/239 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M  D++ RLNK+ISE+G CSRREADR IEQG V +NG +  +G +V PGD V V+G+ + 
Sbjct: 1   MSQDNAKRLNKFISETGFCSRREADRLIEQGRVTINGNKPEMGTKVLPGDDVCVDGKPVA 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            +E    + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN G
Sbjct: 61  AKEKP--IYIALNKPTGITCTTERDVPGNIVDFIGHKKRIFPIGRLDKPSDGLIFLTNDG 118

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           D+VNKILRAGN HEKEY+V VDKPIT EF++ MS+GV IL TVT  CKV KE  F FRI 
Sbjct: 119 DIVNKILRAGNSHEKEYVVRVDKPITGEFLKQMSSGVKILDTVTLPCKVTKETKFSFRIV 178

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
           L QGLNRQIRRMCE  GYEV KL R RIMN+SL GIP G+WR LTDDE+ ++  + + S
Sbjct: 179 LTQGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLTDDEVAEILAMCDGS 237



>UniRef100_A8TB14 Pseudouridine synthase n=1 Tax=Vibrio campbellii
           AND4 RepID=A8TB14_9VIBR
          Length = 383

 Score =  293 bits (750), Expect = 1e-77
 Identities = 153/251 (60%), Positives = 185/251 (73%), Gaps = 3/251 (1%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M  D++ RLNK+ISE+G CSRREADR IEQG V +NG++  +G +V+PGD V V+G  + 
Sbjct: 1   MSQDNAKRLNKFISETGFCSRREADRLIEQGRVTINGQQPEMGTKVQPGDDVCVDGNPVA 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            +E    + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN G
Sbjct: 61  AKEKP--IYIALNKPTGITCTTERDIPGNIVDFIGHKKRIFPIGRLDKPSDGLIFLTNDG 118

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           D+VNKILRAGN+HEKEY+V VDKPIT EF++ MS+GV IL TVT  CKV+KE  F FRI 
Sbjct: 119 DIVNKILRAGNNHEKEYVVRVDKPITGEFLKQMSSGVKILDTVTLPCKVEKETKFSFRIV 178

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS- 239
           L QGLNRQIRRMCE  GYEV KL R RIMN+SL GIP G+WR L+D+E+ ++  + E S 
Sbjct: 179 LTQGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLSDNEVSEILAMCEGSV 238

Query: 240 SSEVKPKAKAK 250
            +E   K  AK
Sbjct: 239 GTEEASKRDAK 249



>UniRef100_C1I9M3 Ribosomal large subunit pseudouridine synthase f
           n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9M3_9CLOT
          Length = 258

 Score =  292 bits (748), Expect = 2e-77
 Identities = 149/233 (63%), Positives = 180/233 (77%), Gaps = 2/233 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +RLNK+ISE+G CSRREAD+ IE G V ++G +A +G +VK    VKV+G+ I  ++ ++
Sbjct: 21  IRLNKFISETGFCSRREADKLIENGRVTVDGIKAVMGTKVKESADVKVDGKSI--KKVDE 78

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           LV IALNKPVGI  TTE   + NIVDFVNH KR+FPIGRLDKDSQGLI LTN GD+VNKI
Sbjct: 79  LVYIALNKPVGITCTTEKKVKGNIVDFVNHKKRIFPIGRLDKDSQGLILLTNDGDVVNKI 138

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN+HEKEY+VTVDKPI E+FI+ MS+GV ILGT+TKKC V KE    FRI L QG+N
Sbjct: 139 LRAGNNHEKEYIVTVDKPIDEKFIKSMSSGVKILGTITKKCIVTKENKNTFRIILTQGMN 198

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
           RQIRRMCE  GY V KL R RIMN+++  + +GEWR+LT  EL  L  LI NS
Sbjct: 199 RQIRRMCEALGYNVVKLNRIRIMNINIERLKIGEWRNLTSKELKGLNNLISNS 251



>UniRef100_Q87RM8 Pseudouridine synthase n=1 Tax=Vibrio
           parahaemolyticus RepID=Q87RM8_VIBPA
          Length = 371

 Score =  291 bits (746), Expect = 4e-77
 Identities = 148/239 (61%), Positives = 179/239 (74%), Gaps = 2/239 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M  D++ RLNK+ISE+G CSRR AD+ IE+G V +NGK+  +G +V PGD V V+G+ + 
Sbjct: 1   MSQDNAKRLNKFISETGFCSRRAADKLIEEGRVTINGKQPEMGTKVLPGDDVCVDGKPVA 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            +E    + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN G
Sbjct: 61  SKEKP--IYIALNKPTGITCTTERDIPGNIVDFIGHKKRIFPIGRLDKPSDGLIFLTNDG 118

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           D+VNKILRAGN+HEKEY+V VDKPIT+EF++ MS+GV IL TVT  CKV KE  F FRI 
Sbjct: 119 DIVNKILRAGNNHEKEYVVRVDKPITDEFLKQMSSGVRILDTVTLPCKVTKETKFSFRIV 178

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
           L QGLNRQIRRMCE  GYEV KL R RIMN+SL GIP G+WR LTDDE+ ++  + + S
Sbjct: 179 LTQGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLTDDEVAEILAMCDGS 237



>UniRef100_Q1V3A2 Pseudouridine synthase n=1 Tax=Vibrio
           alginolyticus 12G01 RepID=Q1V3A2_VIBAL
          Length = 385

 Score =  291 bits (746), Expect = 4e-77
 Identities = 149/239 (62%), Positives = 177/239 (74%), Gaps = 2/239 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M  D++ RLNK+ISE+G CSRREADR IEQG V +NG +  +G +V PGD V V+G+ + 
Sbjct: 1   MSQDNAKRLNKFISETGFCSRREADRLIEQGRVTINGNKPEMGTKVLPGDDVCVDGKPVA 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            +E    + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN G
Sbjct: 61  AKEKP--IYIALNKPTGITCTTERDVPGNIVDFIGHQKRIFPIGRLDKPSDGLIFLTNDG 118

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           D+VNKILRAGN HEKEY+V VDKPIT EF++ MS+GV IL TVT  CKV KE  F FRI 
Sbjct: 119 DIVNKILRAGNSHEKEYVVRVDKPITVEFLKQMSSGVKILDTVTLPCKVTKETKFSFRIV 178

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
           L QGLNRQIRRMCE  GYEV KL R RIMN+SL GIP G+WR L+D+E+ ++  + E S
Sbjct: 179 LTQGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLSDEEVAEILAMCEGS 237



>UniRef100_A5L8E0 Pseudouridine synthase n=1 Tax=Vibrionales
           bacterium SWAT-3 RepID=A5L8E0_9GAMM
          Length = 381

 Score =  291 bits (746), Expect = 4e-77
 Identities = 151/244 (61%), Positives = 182/244 (74%), Gaps = 3/244 (1%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNKYISE+G CSRREAD+ I+ G V +NGK   +G +V PGD V+++ + +  R  E  
Sbjct: 9   RLNKYISETGFCSRREADKLIDAGRVTINGKIPEMGTKVMPGDDVEIDNKPV--RSKEKP 66

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 67  IYIALNKPTGITCTTERDIPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 126

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EF++ M+AGVPIL TVT  CKV+KE  F FRITL QGLNR
Sbjct: 127 RAGNNHEKEYVVRVDKPITGEFLQKMAAGVPILDTVTLPCKVEKETKFSFRITLTQGLNR 186

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS-SSEVKPK 246
           QIRRMCE  GYEV KL R RIMN+SL GIP G+WR L+++E+ ++  + E S S+E   K
Sbjct: 187 QIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLSEEEIAEILAMCEGSVSTEDASK 246

Query: 247 AKAK 250
             AK
Sbjct: 247 INAK 250



>UniRef100_B8KE46 Pseudouridine synthase n=1 Tax=Vibrio
           parahaemolyticus 16 RepID=B8KE46_VIBPA
          Length = 345

 Score =  291 bits (744), Expect = 6e-77
 Identities = 155/253 (61%), Positives = 184/253 (72%), Gaps = 2/253 (0%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M  D++ RLNK+ISE+G CSRREADR IEQG V +NG+   +G +V PGD V+V+ + I 
Sbjct: 1   MSQDNAKRLNKFISETGFCSRREADRLIEQGRVTINGQVPEMGTKVMPGDDVRVDDKPIN 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
               +  V IALNKP GI  TTE     NIVDFV H KR+FPIGRLDK S GLIFLTN G
Sbjct: 61  A-VTDKPVYIALNKPTGITCTTERDIPGNIVDFVGHKKRIFPIGRLDKPSDGLIFLTNDG 119

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           D+VNKILRAGN+HEKEY+V VDKPI+++FI+ MS+GV IL T+T  CKV KE  F FRI 
Sbjct: 120 DIVNKILRAGNNHEKEYVVRVDKPISDDFIKKMSSGVNILDTITLPCKVTKETKFSFRIV 179

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           L QGLNRQIRRMCE  GYEV KL R RIMN+SL GIP G+WR LTD E+ ++  + E SS
Sbjct: 180 LTQGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGQWRYLTDAEVAEILAMCEGSS 239

Query: 241 -SEVKPKAKAKPK 252
            +E   K  AK K
Sbjct: 240 NTEEASKIDAKGK 252



>UniRef100_B7VKI0 Pseudouridine synthase n=1 Tax=Vibrio splendidus
           LGP32 RepID=B7VKI0_VIBSL
          Length = 379

 Score =  290 bits (743), Expect = 8e-77
 Identities = 151/244 (61%), Positives = 180/244 (73%), Gaps = 3/244 (1%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNKYISE+G CSRREAD+ I+ G V +NGK   +G +V PGD V+++ + +  RE    
Sbjct: 9   RLNKYISETGFCSRREADKLIDAGRVTINGKIPEMGTKVLPGDDVEIDNKPVRSREKP-- 66

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 67  IYIALNKPTGITCTTERDIPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 126

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EF++ M AGV IL TVT  CKV+KE  F FRITL QGLNR
Sbjct: 127 RAGNNHEKEYVVRVDKPITTEFLKQMGAGVHILDTVTLPCKVEKETKFSFRITLTQGLNR 186

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS-SSEVKPK 246
           QIRRMCE  GYEV KL R RIMN+SL GIP G+WR L+D+E+ ++  + E S S+E   K
Sbjct: 187 QIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLSDEEITEILAMCEGSVSTEDASK 246

Query: 247 AKAK 250
             AK
Sbjct: 247 MNAK 250



>UniRef100_A3Y4C1 Pseudouridine synthase n=1 Tax=Vibrio sp. MED222
           RepID=A3Y4C1_9VIBR
          Length = 379

 Score =  290 bits (743), Expect = 8e-77
 Identities = 151/244 (61%), Positives = 180/244 (73%), Gaps = 3/244 (1%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNKYISE+G CSRREAD+ I+ G V +NGK   +G +V PGD V+++ + +  RE    
Sbjct: 9   RLNKYISETGFCSRREADKLIDAGRVTINGKIPEMGTKVLPGDDVEIDNKPVRSREKP-- 66

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 67  IYIALNKPTGITCTTERDIPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 126

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EF++ M AGV IL TVT  CKV+KE  F FRITL QGLNR
Sbjct: 127 RAGNNHEKEYVVRVDKPITTEFLKQMGAGVHILDTVTLPCKVEKETKFSFRITLTQGLNR 186

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS-SSEVKPK 246
           QIRRMCE  GYEV KL R RIMN+SL GIP G+WR L+D+E+ ++  + E S S+E   K
Sbjct: 187 QIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLSDEEITEILAMCEGSVSTEDASK 246

Query: 247 AKAK 250
             AK
Sbjct: 247 MNAK 250



>UniRef100_A3V067 Pseudouridine synthase n=1 Tax=Vibrio splendidus
           12B01 RepID=A3V067_VIBSP
          Length = 364

 Score =  290 bits (741), Expect = 1e-76
 Identities = 151/244 (61%), Positives = 180/244 (73%), Gaps = 3/244 (1%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNKYISE+G CSRREAD+ I+ G V +NGK   +G +V PGD V+++ + +  R  E  
Sbjct: 9   RLNKYISETGFCSRREADKLIDAGRVTINGKIPEMGTKVLPGDDVEIDNKPV--RSKEKP 66

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 67  IYIALNKPTGITCTTERDIPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 126

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EF++ M AGV IL TVT  CKV+KE  F FRITL QGLNR
Sbjct: 127 RAGNNHEKEYVVRVDKPITTEFLKQMGAGVHILDTVTLPCKVEKETKFSFRITLTQGLNR 186

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS-SSEVKPK 246
           QIRRMCE  GYEV KL R RIMN+SL GIP G+WR L+D+E+ ++  + E S S+E   K
Sbjct: 187 QIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLSDEEITEILAMCEGSVSTEDASK 246

Query: 247 AKAK 250
             AK
Sbjct: 247 MNAK 250



>UniRef100_C1U3F7 Ribosomal large subunit pseudouridine synthase F
           n=1 Tax=Dyadobacter fermentans DSM 18053
           RepID=C1U3F7_9SPHI
          Length = 248

 Score =  289 bits (739), Expect = 2e-76
 Identities = 141/234 (60%), Positives = 184/234 (78%), Gaps = 2/234 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VR+NK+ISE+G CSRREAD+ +EQG V LNG++A +GD+    D V+V+G+ ++ ++A  
Sbjct: 4   VRINKFISETGFCSRREADKLVEQGRVMLNGRKAVLGDKATTSDDVRVDGKPLKAKKAG- 62

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA NKPVGI  TTE   + NI+D++ H +R+FPIGRLDK S+GLIFLT+ GD+VNKI
Sbjct: 63  -VYIAFNKPVGITCTTERHIKGNIIDYIRHKERIFPIGRLDKPSEGLIFLTSDGDIVNKI 121

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN+HEKEY+VTV+KPIT EFI+ MS+GVPILG VTKKC V+K++ +VF I L QGLN
Sbjct: 122 LRAGNNHEKEYVVTVNKPITPEFIQKMSSGVPILGVVTKKCFVRKDSSYVFTIILTQGLN 181

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           RQIRRMCE  GY V KL+R RIMNV+L  +P+G+WRDLT  E+ ++   I  S+
Sbjct: 182 RQIRRMCEFLGYNVTKLKRVRIMNVTLKDLPVGKWRDLTAAEMQEINAAIAGST 235



>UniRef100_A6DJV5 Pseudouridine synthase n=1 Tax=Lentisphaera
           araneosa HTCC2155 RepID=A6DJV5_9BACT
          Length = 297

 Score =  289 bits (739), Expect = 2e-76
 Identities = 148/285 (51%), Positives = 199/285 (69%), Gaps = 3/285 (1%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +RLNK+IS+SG CSRREADR IE+G V +NG+R   G QV+  D V+V+GQ I+ +  ++
Sbjct: 1   MRLNKFISDSGFCSRREADRLIEEGRVLINGRRCKTGQQVEDKDFVEVDGQRIKAKRQKE 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V +A NKP GI  TTE   + NIVDF+N+ +++FPIGRLDK S GLIF+TN GD+VNKI
Sbjct: 61  RVYLAFNKPEGITCTTEGSVKGNIVDFINYPEKIFPIGRLDKFSNGLIFMTNDGDIVNKI 120

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN HEKEY+VT+D+P+T+EF+R MS G+PIL TVTKKCKV K +   FRI L QGLN
Sbjct: 121 LRAGNAHEKEYVVTIDRPVTDEFLRKMSNGIPILDTVTKKCKVTKVSKNTFRIILTQGLN 180

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS--EVK 244
           RQIRRMCE+    V  L+RTRIM V L  +  G WR L   E+ ++ ++IE+SS+  E  
Sbjct: 181 RQIRRMCEYLACRVLSLQRTRIMKVDLGKLKPGTWRHLNPKEMAEINQMIESSSNTQEAS 240

Query: 245 PKAKAKPKTAGIKRPVVKME-KTAEKGGRPASNGKRFTSPGRKKK 288
             +  + + +  KRPV +   KT+ +  + +S  +R  + GR  K
Sbjct: 241 KDSNKQGRRSLPKRPVARQNMKTSSQSHKKSSPKRRGQTSGRPSK 285



>UniRef100_A6D990 Pseudouridine synthase n=1 Tax=Vibrio shilonii AK1
           RepID=A6D990_9VIBR
          Length = 342

 Score =  287 bits (734), Expect = 9e-76
 Identities = 160/290 (55%), Positives = 195/290 (67%), Gaps = 13/290 (4%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNKYISE+G CSRREAD+ IEQ  V +NGK   +G +V  GD V+++G+ +  R  E  
Sbjct: 9   RLNKYISETGFCSRREADKLIEQQRVTINGKIPEMGTKVLSGDNVEIDGKPV--RSKEKP 66

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           V IALNKP GI  TTE     NIVDFV H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 67  VYIALNKPTGITCTTERDVPGNIVDFVGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 126

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKP+T +F++ M +GV IL TVT  C+V++E  F FRITL QGLNR
Sbjct: 127 RAGNNHEKEYVVRVDKPVTRDFLKKMGSGVAILDTVTLPCRVEQETKFSFRITLTQGLNR 186

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS-SSEVKPK 246
           QIRRMCE  G+EV KL R RIMN+S+ GIP G+WR LTD E+ ++ +L E S S+E   +
Sbjct: 187 QIRRMCEALGFEVLKLRRVRIMNISIDGIPNGKWRYLTDQEVAEIHRLCEGSVSTEEASR 246

Query: 247 AKAK----PKTAGIK----RPVVKMEKTAEKGGRPASNGKRFTSPGRKKK 288
             AK     K    K    R   K EK     G  A   +R  SP + K+
Sbjct: 247 KDAKGRHITKATDAKLHDARAEAKREKMKTFSGHGADEFRR--SPNKNKR 294



>UniRef100_UPI00018512F0 tRNA pseudouridine synthase A n=1
           Tax=Bacillus coahuilensis m4-4 RepID=UPI00018512F0
          Length = 235

 Score =  283 bits (725), Expect = 1e-74
 Identities = 142/236 (60%), Positives = 179/236 (75%), Gaps = 2/236 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NKYIS++G  SRR AD+ IE+G V++NG+RA IGDQV PGD V VNG  +  R A +
Sbjct: 1   MRINKYISDAGKASRRGADKLIEEGRVYINGRRAKIGDQVNPGDDVLVNGNHV--RLARN 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI STTE G + NI+D VNH  R+F IGRLDK+S GLI LTN GD+VN+I
Sbjct: 59  NVYIALNKPVGITSTTEKGVKGNIIDLVNHPLRIFNIGRLDKESDGLILLTNDGDIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY V+VDKPIT+EF+  M++GV ILGT T  CK+++ + + F+ITL QGLN
Sbjct: 119 LRAENKHEKEYFVSVDKPITQEFLDNMASGVKILGTKTLPCKIEQISKYDFQITLTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSE 242
           RQIRRMCE  GYEV +L+RTRIMN+ L  +P+G+WRDL+  E   LFK ++    E
Sbjct: 179 RQIRRMCEALGYEVYRLQRTRIMNIHLGNLPVGQWRDLSKKEKTQLFKELDYEPKE 234



>UniRef100_A8MHI9 Pseudouridine synthase n=1 Tax=Alkaliphilus
           oremlandii OhILAs RepID=A8MHI9_ALKOO
          Length = 228

 Score =  282 bits (722), Expect = 2e-74
 Identities = 147/228 (64%), Positives = 174/228 (76%), Gaps = 2/228 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NKYISE+GICSRREAD++I    V +NG  A +G  V PGD V V+ + I  +    
Sbjct: 1   MRINKYISETGICSRREADQWIIDKRVTINGIVAELGSDVSPGDAVFVDHKPIGQKRKP- 59

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  TTE   + NIVDFV+H +R+FPIGRLDKDSQGLI LTN GD+VNKI
Sbjct: 60  -VYIALNKPVGITCTTEKHVKGNIVDFVHHKERIFPIGRLDKDSQGLILLTNDGDIVNKI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N+HEKEY+VTV+KPIT EFI+GMS+GV ILGT TK CKV K    VFRI L QGLN
Sbjct: 119 LRAENNHEKEYIVTVNKPITPEFIKGMSSGVKILGTKTKPCKVTKINDTVFRIILTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFK 234
           RQIRRMC+ FGY+V KL+R RIMNV L G+ +G+WRDLT +EL  L K
Sbjct: 179 RQIRRMCQVFGYKVVKLQRIRIMNVKLKGLEIGQWRDLTKEELEGLIK 226



>UniRef100_C0Z4U9 Pseudouridine synthase n=1 Tax=Brevibacillus
           brevis NBRC 100599 RepID=C0Z4U9_BREBN
          Length = 228

 Score =  282 bits (722), Expect = 2e-74
 Identities = 142/228 (62%), Positives = 176/228 (77%), Gaps = 2/228 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+GICSRREAD+ IE   V +NG+ A +G  V  GD V+++GQ +  ++ + 
Sbjct: 1   MRINKFISETGICSRREADKLIESKRVTINGQLAELGSTVASGDDVRIDGQPLGVKKKD- 59

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  TTE   + NI+DFVNH +R+FPIGRLDKDSQGLI LTN GD+VNKI
Sbjct: 60  -VYIALNKPVGITCTTELHVKGNIIDFVNHPERIFPIGRLDKDSQGLILLTNDGDIVNKI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N+H+KEY+VTVDKPIT  F+ GM+ GV ILGT TK CKV K +  VF I L QGLN
Sbjct: 119 LRAENNHDKEYIVTVDKPITANFLHGMANGVRILGTTTKPCKVTKVSDRVFNIVLTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFK 234
           RQIRRMC+ FGY+V+KLER RIMN++L  + LG+WR+LT  EL DL K
Sbjct: 179 RQIRRMCQAFGYQVRKLERIRIMNIALGNLKLGQWRNLTAKELTDLNK 226



>UniRef100_A3J4W8 Pseudouridine synthase n=1 Tax=Flavobacteria
           bacterium BAL38 RepID=A3J4W8_9FLAO
          Length = 262

 Score =  282 bits (721), Expect = 3e-74
 Identities = 142/239 (59%), Positives = 186/239 (77%), Gaps = 2/239 (0%)

Query: 2   LPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP 61
           + +++ R+NK++SE+G CSRREADR IEQG V +NGK   +G +V P D V+VNG+LI+ 
Sbjct: 1   MEENATRINKFLSETGFCSRREADRLIEQGRVTINGKVPEMGTKVTPSDEVRVNGKLIQE 60

Query: 62  REAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGD 121
           R  E  + +A NKP GI  TT    RDNI+DF+N+ +R+FPIGRLDK S+GLIF+TN GD
Sbjct: 61  R-TEKPIYLAFNKPAGIECTTNLDVRDNIIDFINYPERIFPIGRLDKASEGLIFMTNDGD 119

Query: 122 LVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITL 181
           +VNKILRA N+HEKEY+VTV+ PIT+ FI  M+ G+PIL T+TKKCKV++ + FVFRI L
Sbjct: 120 IVNKILRARNNHEKEYIVTVNHPITDRFIDRMANGIPILETITKKCKVEQISKFVFRIIL 179

Query: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
            QGLNRQIRRMCE+  YEV  L+RTRI+N+SL  +  G++R+LTD E+ +L KLIE SS
Sbjct: 180 TQGLNRQIRRMCEYLDYEVTALKRTRIINISLD-VAEGKYRNLTDAEVAELNKLIEPSS 237



>UniRef100_A3HUQ5 Pseudouridine synthase n=1 Tax=Algoriphagus sp.
           PR1 RepID=A3HUQ5_9SPHI
          Length = 243

 Score =  282 bits (721), Expect = 3e-74
 Identities = 143/238 (60%), Positives = 183/238 (76%), Gaps = 3/238 (1%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NKY+SE G CSRRE D+ +E G + LNGK   IG +V P DVV V+G+ +  +  +D
Sbjct: 7   IRINKYLSEVGFCSRREGDKLLEAGRITLNGKIPEIGTKVMPKDVVCVDGKPVG-KPIQD 65

Query: 67  LVLIALNKPVGIVSTTED-GERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
            V IA NKPVGIVSTT+   E++N++D++ H +R+FPIGRLDKDS+GLIFLT+ GD+VNK
Sbjct: 66  HVYIAFNKPVGIVSTTDTKAEKNNMIDYIGHQQRIFPIGRLDKDSEGLIFLTSEGDIVNK 125

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILR+ N+HEKEY+VTVDKPIT+ FI+ M AG+PIL TVT  CKV+K +   FRI L QGL
Sbjct: 126 ILRSKNNHEKEYIVTVDKPITDRFIQKMGAGIPILDTVTDPCKVEKISKVKFRIILTQGL 185

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEV 243
           NRQIRRMCE+ GYEV++L+R RIMNV L  IP+G+WRDLT  EL +L  L+  SS  V
Sbjct: 186 NRQIRRMCEYLGYEVRQLKRIRIMNVHLD-IPVGKWRDLTASELKELNDLVSESSKTV 242



>UniRef100_B1YKT4 Pseudouridine synthase n=1 Tax=Exiguobacterium
           sibiricum 255-15 RepID=B1YKT4_EXIS2
          Length = 231

 Score =  281 bits (719), Expect = 5e-74
 Identities = 136/231 (58%), Positives = 174/231 (75%), Gaps = 2/231 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G CSRR AD+ I+ G V +NG  A +G QV+  D V+++GQ ++P+   D
Sbjct: 1   MRINKFISETGYCSRRAADKLIDAGRVTINGNVAELGSQVEKTDAVEIDGQPLQPKP--D 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           L  + LNKPVGI  TTE     NI+DFVNH  R+FPIGRLDKDS GLI LTN GD+VN+I
Sbjct: 59  LEYLILNKPVGITCTTERDIEGNIIDFVNHPNRIFPIGRLDKDSDGLIILTNDGDIVNRI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N+H+KEY+VTVD PITE FI GM+ GV ILGT TK+C V++     FRI L QGLN
Sbjct: 119 LRAENNHDKEYIVTVDAPITETFIEGMAGGVDILGTTTKECVVEQLESRTFRIVLTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE 237
           RQIRRMC+ FGY VK+L+R RIMN+ L  +P+GEWRDLT+ E+  LF+ ++
Sbjct: 179 RQIRRMCKEFGYRVKRLQRVRIMNIELGDLPIGEWRDLTESEMKTLFETLD 229



>UniRef100_A6CL09 Pseudouridine synthase n=1 Tax=Bacillus sp. SG-1
           RepID=A6CL09_9BACI
          Length = 238

 Score =  281 bits (719), Expect = 5e-74
 Identities = 145/236 (61%), Positives = 177/236 (75%), Gaps = 2/236 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G  SRR ADR IE+G V +NGK+A IGDQV+PGD ++V+GQ I  R A +
Sbjct: 4   LRINKFISEAGKASRRGADRLIEEGRVTINGKKAKIGDQVEPGDDIRVSGQQI--RVARN 61

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V +ALNKPVGI STTE   + NIVD VNH  RVF IGRLDKDS GLI LTN GD+VN+I
Sbjct: 62  NVYLALNKPVGITSTTEKNVKGNIVDLVNHPLRVFNIGRLDKDSDGLILLTNDGDIVNEI 121

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V+VDKPIT EF+  MS GV ILGT T  CKV++ + F F+I L QGLN
Sbjct: 122 LRAENQHEKEYIVSVDKPITPEFLTQMSEGVKILGTKTLPCKVEQLSKFDFKIILTQGLN 181

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSE 242
           RQIRRMCE  GYEV +L+R RIMN+ L  +P+G+WRDLT  E   LF+ ++    E
Sbjct: 182 RQIRRMCEALGYEVFRLQRVRIMNIHLGNLPVGQWRDLTKKEKQQLFRELDYEPKE 237



>UniRef100_B5FEZ5 Pseudouridine synthase n=2 Tax=Vibrio fischeri
           RepID=B5FEZ5_VIBFM
          Length = 314

 Score =  281 bits (718), Expect = 6e-74
 Identities = 150/283 (53%), Positives = 194/283 (68%), Gaps = 6/283 (2%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+IS++G CSRREAD+ I+Q  + +NGK   +G +V  GD V V+G+ +  +E +D 
Sbjct: 10  RLNKFISDTGYCSRREADKLIDQQRITINGKIPEMGTKVADGDEVLVDGKPL--KEKQDR 67

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IA NKPVGI  TTE     NIVD++NH +R+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 68  IYIAFNKPVGITCTTERHVEGNIVDYINHEQRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 127

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN HEKEY+V VDKPIT+EF++ M+AGVPIL TVT  CK+K+E+ FVFRITL QGLNR
Sbjct: 128 RAGNAHEKEYVVRVDKPITDEFLQKMAAGVPILDTVTLPCKIKQESRFVFRITLTQGLNR 187

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKPKA 247
           QIRRMCE+  YEV KL+R RIMN+ L  +  GEWR L+  E+  L  +I  SS   +   
Sbjct: 188 QIRRMCEYLDYEVFKLKRVRIMNIDLGKLASGEWRYLSQAEMDQLNGMIGTSSKTEEASR 247

Query: 248 KAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           K K     I   V  ++K +      ++N  +     + K+GR
Sbjct: 248 KVKE----IDGKVRVLKKASSGRNHHSNNTFKENRREKAKEGR 286



>UniRef100_C1S266 Pseudouridine synthase family protein n=1
           Tax=Chitinophaga pinensis DSM 2588 RepID=C1S266_9SPHI
          Length = 389

 Score =  280 bits (717), Expect = 8e-74
 Identities = 148/288 (51%), Positives = 194/288 (67%), Gaps = 4/288 (1%)

Query: 4   DSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPRE 63
           D S+ LNK+IS++G CSRREAD  I  G V LN + A +G++ KPGD V+V+G LI   +
Sbjct: 2   DQSISLNKFISDTGYCSRREADNLITSGRVLLNDRPAALGNRYKPGDTVEVDGSLITAAK 61

Query: 64  AEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLV 123
            E  V +ALNKP GI +TTE   +DNI+ FVN+ +R+FPIGRLDKDS+GLIFLTN GD++
Sbjct: 62  KEKRVYLALNKPPGITTTTELHIKDNIISFVNYPQRIFPIGRLDKDSEGLIFLTNDGDII 121

Query: 124 NKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQ 183
           NKILRA N+HEKEY+V V+KPI   F+  MS GVPIL T T  CKV+      FRITL Q
Sbjct: 122 NKILRAANNHEKEYVVRVNKPIDTNFLHQMSQGVPILDTRTLPCKVQMTGRQTFRITLTQ 181

Query: 184 GLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS---S 240
           GLNRQIRRMCE+ GY V  L+R RIMNV L  +PLG+WR L++ E+  + + + +S   S
Sbjct: 182 GLNRQIRRMCEYLGYTVVGLQRVRIMNVRLDKLPLGKWRYLSEAEIAFIKESVADSTKVS 241

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKK 288
            E KP   A+ KTA        +   +    +PA+  KR  +P + ++
Sbjct: 242 GESKPSG-ARRKTAKPVEEKEHLRTGSTPKNKPATGHKRVAAPAKHRE 288



>UniRef100_A2P6J1 Pseudouridine synthase n=1 Tax=Vibrio cholerae
           1587 RepID=A2P6J1_VIBCH
          Length = 340

 Score =  280 bits (717), Expect = 8e-74
 Identities = 144/233 (61%), Positives = 173/233 (74%), Gaps = 2/233 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+ISE+G CSRREAD+ IEQG V LNG +  +G +V   D V ++G+ +  +E    
Sbjct: 20  RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPLRSKERP-- 77

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 78  IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 137

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EFIR MS+GV IL TVT  CKV +E  + FRI L QGLNR
Sbjct: 138 RAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLTQGLNR 197

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           QIRRMCE  GYEV KL R RIMN++L GIP G+WR L+D E+ ++  + E+SS
Sbjct: 198 QIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSDTEVSEILAMCEDSS 250



>UniRef100_C2I735 Ribosomal large subunit pseudouridine synthase F
           n=1 Tax=Vibrio cholerae TM 11079-80 RepID=C2I735_VIBCH
          Length = 328

 Score =  280 bits (716), Expect = 1e-73
 Identities = 144/233 (61%), Positives = 173/233 (74%), Gaps = 2/233 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+ISE+G CSRREAD+ IEQG V LNG +  +G +V   D V ++G+ +  +E    
Sbjct: 8   RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPLRSKERP-- 65

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 66  IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 125

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EFIR MS+GV IL TVT  CKV +E  + FRI L QGLNR
Sbjct: 126 RAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLTQGLNR 185

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           QIRRMCE  GYEV KL R RIMN++L GIP G+WR L+D E+ ++  + E+SS
Sbjct: 186 QIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSDAEVSEILAMCEDSS 238



>UniRef100_A4C4B7 Pseudouridine synthase n=1 Tax=Pseudoalteromonas
           tunicata D2 RepID=A4C4B7_9GAMM
          Length = 285

 Score =  280 bits (716), Expect = 1e-73
 Identities = 144/257 (56%), Positives = 184/257 (71%), Gaps = 3/257 (1%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           S RLNKYIS++G CSRREAD+YI  G V LNGK   +G +V   DVV+++G+ ++ +   
Sbjct: 4   STRLNKYISDTGFCSRREADKYIADGRVTLNGKIPEVGTKVTDSDVVEIDGKPLKAKPKA 63

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
             V IA NKPVG+  TTE   R NI+  +NH +R+FPIGRLD+ S+GLIFLTN GD+VNK
Sbjct: 64  --VFIAYNKPVGVTCTTELNIRSNIISAINHPERIFPIGRLDRPSEGLIFLTNEGDIVNK 121

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRAGN+HEKEYLVTVDK I+ +FI+ M AGVPILGTVTK+CKV + +   F I L QGL
Sbjct: 122 ILRAGNNHEKEYLVTVDKAISPQFIKKMGAGVPILGTVTKQCKVTQVSSHGFNIVLTQGL 181

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKP 245
           NRQIRRMCE  GYEV  L+R RIMN+ L+G+  G+WR+LTD E+  + + IE  S + + 
Sbjct: 182 NRQIRRMCEFLGYEVVTLKRVRIMNIDLTGLRSGQWRNLTDKEMAIINRSIE-GSGKTEE 240

Query: 246 KAKAKPKTAGIKRPVVK 262
            +    K    K+PV K
Sbjct: 241 LSVDPNKNKNFKKPVKK 257



>UniRef100_C0FVJ4 Putative uncharacterized protein n=1 Tax=Roseburia
           inulinivorans DSM 16841 RepID=C0FVJ4_9FIRM
          Length = 260

 Score =  280 bits (715), Expect = 1e-73
 Identities = 134/252 (53%), Positives = 193/252 (76%), Gaps = 5/252 (1%)

Query: 2   LPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP 61
           + ++ +R+NK++SE+G+CSRREADR +E GN+ ++GK A  G +V PG  V   G+ +  
Sbjct: 1   MEENGIRINKFLSEAGVCSRREADRQVELGNITIDGKVAETGARVLPGQTVLFQGKKVS- 59

Query: 62  REAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGD 121
            + E+++LIA +KPVGIV T E  E++N++D++N+ KR++PIGRLDKDS+GL+ LTN+GD
Sbjct: 60  -KEEEMILIAFHKPVGIVCTAEKREKNNVIDYINYPKRIYPIGRLDKDSEGLLLLTNNGD 118

Query: 122 LVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPI--LGTVTKKCKVKKEAPFVFRI 179
           +VNK++R+GN HEKEY+VTV++P+TE FI G++ GVP+  L T+T+KC VK+     F+I
Sbjct: 119 IVNKMMRSGNMHEKEYIVTVNRPVTESFIHGLANGVPLAELNTMTRKCHVKQIGKKQFKI 178

Query: 180 TLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
            L QGLNRQIRRMCE+FGY V+KL RTRIMN+ L  +P+G +RD+T +E   L  LI++S
Sbjct: 179 ILTQGLNRQIRRMCEYFGYRVEKLVRTRIMNIELGDLPVGTYRDVTTEEYRQLLSLIKDS 238

Query: 240 SSE-VKPKAKAK 250
           S+E V PK   K
Sbjct: 239 SNETVIPKKYPK 250



>UniRef100_A4AV85 Pseudouridine synthase n=1 Tax=Flavobacteriales
           bacterium HTCC2170 RepID=A4AV85_9FLAO
          Length = 245

 Score =  279 bits (713), Expect = 2e-73
 Identities = 141/241 (58%), Positives = 185/241 (76%), Gaps = 5/241 (2%)

Query: 2   LPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLI-E 60
           +     R+NKY+SE G CSRR AD+ I+QG V +NGK   +G ++  GD V+V+G+LI E
Sbjct: 1   MTQKETRINKYLSEVGYCSRRAADKLIDQGRVTINGKVPEMGTKIISGDEVRVDGELISE 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNH 119
           P+E    V +A NKP+GIV TT+   E+DNI+DF+N+ KR+FPIGRLDK SQGLIFLTN 
Sbjct: 61  PKEKP--VYLAFNKPIGIVCTTDTRVEKDNIIDFINYPKRIFPIGRLDKPSQGLIFLTND 118

Query: 120 GDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRI 179
           GD+VNKILRA N HEKEYLVTVDKPI ++F+  M++GVPIL TVT+KC++ +   + F+I
Sbjct: 119 GDIVNKILRARNHHEKEYLVTVDKPINKKFLDQMASGVPILDTVTRKCEITEVNKYQFKI 178

Query: 180 TLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
            L QGLNRQIRRMCE+ GY VKKL+R RIMNV L  +P+G+WR+LT+ EL ++ +L+  S
Sbjct: 179 ILTQGLNRQIRRMCEYLGYNVKKLKRIRIMNVKLD-MPIGKWRNLTNSELQEINRLVSGS 237

Query: 240 S 240
           S
Sbjct: 238 S 238



>UniRef100_C2IRG0 Ribosomal large subunit pseudouridine synthase F
           n=1 Tax=Vibrio cholerae TMA 21 RepID=C2IRG0_VIBCH
          Length = 328

 Score =  278 bits (712), Expect = 3e-73
 Identities = 143/233 (61%), Positives = 173/233 (74%), Gaps = 2/233 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+ISE+G CSRREAD+ IEQG V LNG +  +G +V   D V ++G+ +  +E    
Sbjct: 8   RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTDQDEVCIDGKPLRSKERP-- 65

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 66  IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 125

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EFIR MS+GV IL TVT  CKV +E  + FRI L QGLNR
Sbjct: 126 RAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLTQGLNR 185

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           QIRRMCE  GYEV KL R RIMN++L GIP G+WR L++ E+ ++  + E+SS
Sbjct: 186 QIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSS 238



>UniRef100_C2HUZ3 Ribosomal large subunit pseudouridine synthase F
           n=1 Tax=Vibrio cholerae bv. albensis VL426
           RepID=C2HUZ3_VIBCH
          Length = 328

 Score =  278 bits (712), Expect = 3e-73
 Identities = 143/233 (61%), Positives = 173/233 (74%), Gaps = 2/233 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+ISE+G CSRREAD+ IEQG V LNG +  +G +V   D V ++G+ +  +E    
Sbjct: 8   RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTDQDEVCIDGKPLRSKERP-- 65

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 66  IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 125

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EFIR MS+GV IL TVT  CKV +E  + FRI L QGLNR
Sbjct: 126 RAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLTQGLNR 185

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           QIRRMCE  GYEV KL R RIMN++L GIP G+WR L++ E+ ++  + E+SS
Sbjct: 186 QIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSS 238



>UniRef100_B2D735 Pseudouridine synthase n=1 Tax=Vibrio cholerae
           MZO-3 RepID=B2D735_VIBCH
          Length = 340

 Score =  278 bits (712), Expect = 3e-73
 Identities = 143/233 (61%), Positives = 173/233 (74%), Gaps = 2/233 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+ISE+G CSRREAD+ IEQG V LNG +  +G +V   D V ++G+ +  +E    
Sbjct: 20  RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPLRSKERP-- 77

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 78  IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 137

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EFIR MS+GV IL TVT  CKV +E  + FRI L QGLNR
Sbjct: 138 RAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLTQGLNR 197

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           QIRRMCE  GYEV KL R RIMN++L GIP G+WR L++ E+ ++  + E+SS
Sbjct: 198 QIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSS 250



>UniRef100_C3NNC4 Ribosomal large subunit pseudouridine synthase F
           n=6 Tax=Vibrio cholerae RepID=C3NNC4_VIBCH
          Length = 328

 Score =  278 bits (712), Expect = 3e-73
 Identities = 143/233 (61%), Positives = 173/233 (74%), Gaps = 2/233 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+ISE+G CSRREAD+ IEQG V LNG +  +G +V   D V ++G+ +  +E    
Sbjct: 8   RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPLRSKERP-- 65

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 66  IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 125

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EFIR MS+GV IL TVT  CKV +E  + FRI L QGLNR
Sbjct: 126 RAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLTQGLNR 185

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           QIRRMCE  GYEV KL R RIMN++L GIP G+WR L++ E+ ++  + E+SS
Sbjct: 186 QIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSS 238



>UniRef100_A6XW27 Pseudouridine synthase n=1 Tax=Vibrio cholerae
           AM-19226 RepID=A6XW27_VIBCH
          Length = 340

 Score =  278 bits (712), Expect = 3e-73
 Identities = 143/233 (61%), Positives = 173/233 (74%), Gaps = 2/233 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+ISE+G CSRREAD+ IEQG V LNG +  +G +V   D V ++G+ +  +E    
Sbjct: 20  RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPLRSKERP-- 77

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 78  IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 137

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EFIR MS+GV IL TVT  CKV +E  + FRI L QGLNR
Sbjct: 138 RAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLTQGLNR 197

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           QIRRMCE  GYEV KL R RIMN++L GIP G+WR L++ E+ ++  + E+SS
Sbjct: 198 QIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSS 250



>UniRef100_A6AEY6 Pseudouridine synthase n=1 Tax=Vibrio cholerae
           623-39 RepID=A6AEY6_VIBCH
          Length = 340

 Score =  278 bits (712), Expect = 3e-73
 Identities = 143/233 (61%), Positives = 173/233 (74%), Gaps = 2/233 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+ISE+G CSRREAD+ IEQG V LNG +  +G +V   D V ++G+ +  +E    
Sbjct: 20  RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPLRSKERP-- 77

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 78  IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 137

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EFIR MS+GV IL TVT  CKV +E  + FRI L QGLNR
Sbjct: 138 RAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLTQGLNR 197

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           QIRRMCE  GYEV KL R RIMN++L GIP G+WR L++ E+ ++  + E+SS
Sbjct: 198 QIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSS 250



>UniRef100_A3EKC6 Pseudouridine synthase n=1 Tax=Vibrio cholerae V51
           RepID=A3EKC6_VIBCH
          Length = 340

 Score =  278 bits (712), Expect = 3e-73
 Identities = 143/233 (61%), Positives = 173/233 (74%), Gaps = 2/233 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+ISE+G CSRREAD+ IEQG V LNG +  +G +V   D V ++G+ +  +E    
Sbjct: 20  RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTDQDEVCIDGKPLRSKERP-- 77

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 78  IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 137

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EFIR MS+GV IL TVT  CKV +E  + FRI L QGLNR
Sbjct: 138 RAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLTQGLNR 197

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           QIRRMCE  GYEV KL R RIMN++L GIP G+WR L++ E+ ++  + E+SS
Sbjct: 198 QIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSS 250



>UniRef100_C3LPM7 Pseudouridine synthase family 1 protein n=10
           Tax=Vibrio cholerae RepID=C3LPM7_VIBCH
          Length = 340

 Score =  278 bits (712), Expect = 3e-73
 Identities = 143/233 (61%), Positives = 173/233 (74%), Gaps = 2/233 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+ISE+G CSRREAD+ IEQG V LNG +  +G +V   D V ++G+ +  +E    
Sbjct: 20  RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPLRSKERP-- 77

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKIL
Sbjct: 78  IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 137

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+V VDKPIT EFIR MS+GV IL TVT  CKV +E  + FRI L QGLNR
Sbjct: 138 RAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLTQGLNR 197

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           QIRRMCE  GYEV KL R RIMN++L GIP G+WR L++ E+ ++  + E+SS
Sbjct: 198 QIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSS 250



>UniRef100_A1SWW8 Pseudouridine synthase n=1 Tax=Psychromonas
           ingrahamii 37 RepID=A1SWW8_PSYIN
          Length = 318

 Score =  278 bits (711), Expect = 4e-73
 Identities = 146/288 (50%), Positives = 191/288 (66%), Gaps = 10/288 (3%)

Query: 4   DSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPRE 63
           +S +RLNK+IS+SG CSRREAD+ IEQ  V +NG    +G +V+ GD+V V+G+ I    
Sbjct: 20  NSEIRLNKFISDSGFCSRREADKLIEQNRVKINGDIPELGTKVQLGDLVLVDGKRINASA 79

Query: 64  AE--DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGD 121
            +  D + I  NKP+GI  TTE     NI++ + H KR+FPIGRLDK S+GLIFLT+ GD
Sbjct: 80  QDKLDRIYIVYNKPIGITCTTERHIHGNIINAIGHKKRIFPIGRLDKPSEGLIFLTSDGD 139

Query: 122 LVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITL 181
           +VNKILRA N H+KEYLVTVDKP++E F+  M  GVPIL T+TK CKV  ++ F+FRI L
Sbjct: 140 IVNKILRAENAHDKEYLVTVDKPLSERFVERMQRGVPILDTITKPCKVTVDSRFIFRIVL 199

Query: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS 241
            QGLNRQIRRMCEH GYEV KL+RTRIM V L  +  G+WR+LT+ EL ++ + + +SS 
Sbjct: 200 TQGLNRQIRRMCEHLGYEVLKLKRTRIMKVGLGNLKPGQWRNLTNIELAEINQAVSSSSK 259

Query: 242 EVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPA------SNGKRFTSP 283
                  AKP +   +   +K    A    +PA       N K  T+P
Sbjct: 260 TATD--PAKPVSKAPQSEAIKKSTGANNSHQPAKKIFINKNSKNTTTP 305



>UniRef100_A6EPE0 Pseudouridine synthase n=1 Tax=unidentified
           eubacterium SCB49 RepID=A6EPE0_9BACT
          Length = 291

 Score =  278 bits (711), Expect = 4e-73
 Identities = 149/289 (51%), Positives = 192/289 (66%), Gaps = 16/289 (5%)

Query: 5   SSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREA 64
           +S RLNK IS+SG CSRR+AD+ IE+G V LNG   ++GD+  P DV+ V G LI   E 
Sbjct: 6   NSTRLNKAISDSGYCSRRQADKLIEEGKVTLNGNPVSLGDRAMPDDVIHVEGNLIT--EN 63

Query: 65  EDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
            +LV I LNKPVGI  TT+     N+VD+++H +R+F +GRLDK S+GL+ +TN GD+VN
Sbjct: 64  NNLVYIILNKPVGITCTTDLRVEGNVVDYIDHKERIFHVGRLDKPSEGLLLMTNDGDIVN 123

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPI--LGTVTKKCKVKKEAPFVFRITLV 182
           KILRAGN HEKEY V VD+PIT EFIR M  G+P+  L T TKKC V++ + FVFRI LV
Sbjct: 124 KILRAGNSHEKEYFVKVDRPITTEFIRRMGNGIPLEELETTTKKCFVEQVSRFVFRIILV 183

Query: 183 QGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSE 242
           QGLNRQIRRMCE+  YEV +L+R RIMN+ L  +P GEWRDLT +EL  L   +  S ++
Sbjct: 184 QGLNRQIRRMCEYLDYEVMELKRERIMNIELGDLPYGEWRDLTKEELQGLKDAVAKSEND 243

Query: 243 V----KPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKK 287
                + K KA PKT    R   + E    +         R  +PGR++
Sbjct: 244 SFIDREEKRKAAPKTGDANRNRPRNEAPKRE--------SRLKNPGRRR 284



>UniRef100_B1HNP4 Pseudouridine synthase n=1 Tax=Lysinibacillus
           sphaericus C3-41 RepID=B1HNP4_LYSSC
          Length = 233

 Score =  278 bits (710), Expect = 5e-73
 Identities = 139/230 (60%), Positives = 177/230 (76%), Gaps = 2/230 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NKY+SE+GI SRR AD++I +G V +NG+ AT+G QV+ GD+V ++G+  E ++ + 
Sbjct: 1   MRINKYLSETGIISRRGADKWIAEGKVTINGEPATVGSQVQDGDIVCIDGK--EVKKEQQ 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           LV IALNKPVGI STTE   + N+VDFVNH  R+F IGRLDK+S+GL+ LTN GD+VNKI
Sbjct: 59  LVYIALNKPVGITSTTERHIKGNVVDFVNHPLRIFHIGRLDKESEGLLLLTNDGDIVNKI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V VDKPITE+FI  MSAGV IL T T  C V+K +  VF+I L QGLN
Sbjct: 119 LRAENHHEKEYIVQVDKPITEQFINKMSAGVDILDTTTLPCYVEKISDKVFKIILEQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLI 236
           RQIRRMC   GY VK+L+R RIMN+ L  + +G+WRDLTD E  +LFKL+
Sbjct: 179 RQIRRMCSALGYSVKRLQRIRIMNIKLGNLKVGQWRDLTDKEQTELFKLL 228



>UniRef100_A0M549 Pseudouridine synthase n=1 Tax=Gramella forsetii
           KT0803 RepID=A0M549_GRAFK
          Length = 266

 Score =  278 bits (710), Expect = 5e-73
 Identities = 144/258 (55%), Positives = 189/258 (73%), Gaps = 6/258 (2%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREA-E 65
           VR+NKY+S+ G CSRR AD+ I+QG + +N K   +G +V PGD+VKV+G+ +   E  E
Sbjct: 5   VRINKYLSQLGYCSRRAADKLIDQGRITINDKVPEMGTKVTPGDLVKVDGKPVSKEELKE 64

Query: 66  DLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
             V IA NKPVGIV TT+   E+DNI+D++N+ KR+FPIGRLDK S+GLIFLTN GD+VN
Sbjct: 65  PNVYIAFNKPVGIVCTTDTRVEKDNIIDYINYPKRIFPIGRLDKPSEGLIFLTNDGDIVN 124

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRA N+HEKEY+V+V+KP++ EF++ MSAGVPIL TVT++C+++K     FRI L QG
Sbjct: 125 KILRARNNHEKEYVVSVNKPVSSEFLKKMSAGVPILDTVTRECEIEKLGHHTFRIVLTQG 184

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVK 244
           LNRQIRRMCE   Y+V  L+R RIMNVSL  IP+GEWRDLT +EL  +  L + S+   +
Sbjct: 185 LNRQIRRMCEFLDYQVTSLKRIRIMNVSLD-IPVGEWRDLTSEELKTINNLTDESTKTEE 243

Query: 245 PKAKAKPKTAGI---KRP 259
               +  K A +   KRP
Sbjct: 244 GSLTSTAKKANLRTGKRP 261



>UniRef100_Q1Z8C7 Pseudouridine synthase n=1 Tax=Photobacterium
           profundum 3TCK RepID=Q1Z8C7_PHOPR
          Length = 367

 Score =  278 bits (710), Expect = 5e-73
 Identities = 152/295 (51%), Positives = 196/295 (66%), Gaps = 14/295 (4%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNK+IS++G CSRREAD+ I+QG V +NG +  +G +V P D V V+ + +  +E   
Sbjct: 19  VRLNKFISDTGYCSRREADKLIDQGRVTINGTQPEMGTKVMPDDEVLVDDKPLRAKERP- 77

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            + IALNKP G+  TTE   +DNIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKI
Sbjct: 78  -IYIALNKPTGVTCTTERHVKDNIVDFIGHRKRIFPIGRLDKPSDGLIFLTNDGDIVNKI 136

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN HEKEY+V VD  IT EF+  M++GV IL TVT  C VKKE  + FRITL QGLN
Sbjct: 137 LRAGNSHEKEYVVRVDHQITPEFLEKMASGVEILDTVTLPCTVKKETDYSFRITLTQGLN 196

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS-----S 241
           RQIRRMCE  GY+V KL R RIMN+++ G+P G+WR LTD E+ ++  LI  SS     S
Sbjct: 197 RQIRRMCEALGYDVYKLRRVRIMNITIDGLPNGKWRYLTDAEISEINTLISQSSGTEEAS 256

Query: 242 EVKPKAKAKPKTAGIK------RPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           +V  + +A  K    K      +   + ++  E+G R A+  K F + G   + R
Sbjct: 257 KVDAEGQAISKATDAKLFDSRQQAAEERQRERERGMRDATY-KTFKAKGEFTRTR 310



>UniRef100_Q2C7B7 Pseudouridine synthase n=1 Tax=Photobacterium sp.
           SKA34 RepID=Q2C7B7_9GAMM
          Length = 357

 Score =  276 bits (705), Expect = 2e-72
 Identities = 155/296 (52%), Positives = 196/296 (66%), Gaps = 14/296 (4%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNK+IS++G CSRREAD+ I+QG V +NG++  +G +V   D V ++ + +  +E   
Sbjct: 14  VRLNKFISDTGYCSRREADKLIDQGRVTINGQKPEMGVRVMDNDDVLIDDKPLRSKERP- 72

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKI
Sbjct: 73  -IYIALNKPTGITCTTERHIEGNIVDFIGHRKRIFPIGRLDKPSDGLIFLTNDGDIVNKI 131

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN HEKEY+V VDK IT EF+  M++GV IL TVT  CKV KE  F FRI L QGLN
Sbjct: 132 LRAGNSHEKEYVVRVDKVITPEFLEKMASGVEILDTVTLPCKVTKETNFSFRIVLTQGLN 191

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS-----S 241
           RQIRRMCE  GYEV KL R RIMN+++ G+P G+WR LTDDE+ ++ +LI  SS     S
Sbjct: 192 RQIRRMCEALGYEVYKLRRVRIMNITIDGLPNGKWRYLTDDEIGEINRLIAQSSGTEEAS 251

Query: 242 EVKPKAKAKPKTAGIK-----RPVVKMEKTA-EKGGRPASNGKRFT-SPGRKKKGR 290
           +V  + +   K    K     +   + EK A EK  +  S    FT  PG +++ R
Sbjct: 252 KVDAEGRKIAKATDAKLYDHRQQEARNEKRAQEKAFKTYSGTGEFTRRPGGQRQNR 307



>UniRef100_Q1ZRJ1 Pseudouridine synthase n=1 Tax=Vibrio angustum S14
           RepID=Q1ZRJ1_9VIBR
          Length = 375

 Score =  276 bits (705), Expect = 2e-72
 Identities = 155/296 (52%), Positives = 196/296 (66%), Gaps = 14/296 (4%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNK+IS++G CSRREAD+ I+QG V +NG++  +G +V   D V ++ + +  +E   
Sbjct: 14  VRLNKFISDTGYCSRREADKLIDQGRVTINGQKPEMGVRVMDNDDVLIDDKPLRSKERP- 72

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            + IALNKP GI  TTE     NIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKI
Sbjct: 73  -IYIALNKPTGITCTTERHIEGNIVDFIGHRKRIFPIGRLDKPSDGLIFLTNDGDIVNKI 131

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN HEKEY+V VDK IT EF+  M++GV IL TVT  CKV KE  F FRI L QGLN
Sbjct: 132 LRAGNSHEKEYVVRVDKVITPEFLEKMASGVEILDTVTLPCKVTKETNFSFRIVLTQGLN 191

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS-----S 241
           RQIRRMCE  GYEV KL R RIMN+++ G+P G+WR LTDDE+ ++ +LI  SS     S
Sbjct: 192 RQIRRMCEALGYEVYKLRRVRIMNITIDGLPNGKWRYLTDDEIGEINRLIAQSSGTEEAS 251

Query: 242 EVKPKAKAKPKTAGIK-----RPVVKMEKTA-EKGGRPASNGKRFT-SPGRKKKGR 290
           +V  + +   K    K     +   + EK A EK  +  S    FT  PG +++ R
Sbjct: 252 KVDAEGRKIAKATDAKLYDHRQQEARNEKRAQEKAFKTYSGTGEFTRRPGGQRQNR 307



>UniRef100_Q15VC0 Pseudouridine synthase n=1 Tax=Pseudoalteromonas
           atlantica T6c RepID=Q15VC0_PSEA6
          Length = 317

 Score =  275 bits (704), Expect = 3e-72
 Identities = 148/302 (49%), Positives = 200/302 (66%), Gaps = 16/302 (5%)

Query: 5   SSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP--R 62
           SS+RLNK+IS+SG CSRREAD+ I+   V +NG    +G +V  GD V+V+G LI+    
Sbjct: 12  SSIRLNKFISDSGFCSRREADKLIDSQRVTINGVIPELGTKVLSGDEVRVDGNLIKASAE 71

Query: 63  EAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDL 122
              D V +A +KPVGI  TTE   + NI+D + H +R+FPIGRLDK S+GLIFLT+ GD+
Sbjct: 72  NKSDRVYLAYHKPVGITCTTERHVKGNIIDAIGHPERIFPIGRLDKPSEGLIFLTSDGDI 131

Query: 123 VNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLV 182
           VNKILRA N H+KEY+VTVD+P+TE FI  M AGVPIL TVTK C V  ++ FVFRI L 
Sbjct: 132 VNKILRAENAHDKEYIVTVDRPLTERFIHAMGAGVPILDTVTKPCTVTMQSKFVFRIILT 191

Query: 183 QGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS-- 240
           QGLNRQIRRMCE+ GY V KL+R+RIM++ L+G+ +G+WR+LT DE+ ++   +E S+  
Sbjct: 192 QGLNRQIRRMCEYLGYGVTKLKRSRIMSIRLAGLKVGQWRNLTPDEMREISDAVEGSTKT 251

Query: 241 ---SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGR----PASNGKR-----FTSPGRKKK 288
              ++ K  A    K A    P    +++  +G +     A +G R      T+P    +
Sbjct: 252 ALKTDQKIAANVTDKNAPKTEPTRSSKRSHHRGIKSQVGEAKHGSRRQATNNTAPATPSR 311

Query: 289 GR 290
           GR
Sbjct: 312 GR 313



>UniRef100_A5FNF2 Pseudouridine synthase n=1 Tax=Flavobacterium
           johnsoniae UW101 RepID=A5FNF2_FLAJ1
          Length = 272

 Score =  275 bits (704), Expect = 3e-72
 Identities = 144/247 (58%), Positives = 186/247 (75%), Gaps = 5/247 (2%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+I E+G CSRREAD+ IE+G V +NG  A +G +V   D ++++G+LI  +  E L
Sbjct: 7   RLNKFIGETGYCSRREADKLIEEGRVTINGAAAEMGTKVSSDDEIRIDGKLIVEKH-EKL 65

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           V +A NKPVGI  TT    ++NIVD++N+ KR+FPIGRLDK S+GLIF+TN GD+VNKIL
Sbjct: 66  VYLAFNKPVGIECTTNLEVKNNIVDYINYPKRIFPIGRLDKASEGLIFMTNDGDIVNKIL 125

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RA N+HEKEY VTV+KPITE FI+ M  GVPIL TVTKKCKV++ + + F+I L QGLNR
Sbjct: 126 RARNNHEKEYTVTVNKPITERFIQRMGNGVPILDTVTKKCKVEQISKYTFKIILTQGLNR 185

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKPKA 247
           QIRRM E+ GYEV  L+R RI+N+SL  +P+G +RDLTD E+ +L KLIE SS   K + 
Sbjct: 186 QIRRMSEYLGYEVTALKRIRIINISLD-VPVGRYRDLTDAEIKELNKLIEPSS---KTEE 241

Query: 248 KAKPKTA 254
            + PK A
Sbjct: 242 ASLPKAA 248



>UniRef100_Q8RIU2 Pseudouridine synthase n=1 Tax=Flavobacterium
           johnsoniae RepID=Q8RIU2_FLAJO
          Length = 304

 Score =  275 bits (704), Expect = 3e-72
 Identities = 144/247 (58%), Positives = 186/247 (75%), Gaps = 5/247 (2%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+I E+G CSRREAD+ IE+G V +NG  A +G +V   D ++++G+LI  +  E L
Sbjct: 7   RLNKFIGETGYCSRREADKLIEEGRVTINGAAAEMGTKVSSDDEIRIDGKLIVEKH-EKL 65

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           V +A NKPVGI  TT    ++NIVD++N+ KR+FPIGRLDK S+GLIF+TN GD+VNKIL
Sbjct: 66  VYLAFNKPVGIECTTNLEVKNNIVDYINYPKRIFPIGRLDKASEGLIFMTNDGDIVNKIL 125

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RA N+HEKEY VTV+KPITE FI+ M  GVPIL TVTKKCKV++ + + F+I L QGLNR
Sbjct: 126 RARNNHEKEYTVTVNKPITERFIQRMGNGVPILDTVTKKCKVEQISKYTFKIILTQGLNR 185

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKPKA 247
           QIRRM E+ GYEV  L+R RI+N+SL  +P+G +RDLTD E+ +L KLIE SS   K + 
Sbjct: 186 QIRRMSEYLGYEVTALKRIRIINISLD-VPVGRYRDLTDAEIKELNKLIEPSS---KTEE 241

Query: 248 KAKPKTA 254
            + PK A
Sbjct: 242 ASLPKAA 248



>UniRef100_Q6LNM8 Pseudouridine synthase n=1 Tax=Photobacterium
           profundum RepID=Q6LNM8_PHOPR
          Length = 372

 Score =  275 bits (703), Expect = 4e-72
 Identities = 151/295 (51%), Positives = 195/295 (66%), Gaps = 14/295 (4%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNK+IS++G CSRREAD+ I+QG V +NG +  +G +V P D V V+ + +  +E   
Sbjct: 19  VRLNKFISDTGYCSRREADKLIDQGRVTINGTQPEMGTKVMPDDEVLVDDKPLRAKERP- 77

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            + IALNKP G+  TTE   +DNIVDF+ H KR+FPIGRLDK S GLIFLTN GD+VNKI
Sbjct: 78  -IYIALNKPTGVTCTTERHVKDNIVDFIGHRKRIFPIGRLDKPSDGLIFLTNDGDIVNKI 136

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRAGN HEKEY+V V   IT EF+  M++GV IL TVT  C VKKE  + FRITL QGLN
Sbjct: 137 LRAGNSHEKEYVVRVSHQITPEFLEKMASGVEILDTVTLPCIVKKETDYSFRITLTQGLN 196

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS-----S 241
           RQIRRMCE  GY+V KL R RIMN+++ G+P G+WR LTD E+ ++  LI  SS     S
Sbjct: 197 RQIRRMCEALGYDVYKLRRVRIMNITIDGLPNGKWRYLTDAEIAEINTLISQSSGTEEAS 256

Query: 242 EVKPKAKAKPKTAGIK------RPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290
           +V  + +A  K    K      +   + ++  E+G R A+  K F + G   + R
Sbjct: 257 KVDAEGQAIAKATDAKLFDSRQQAAEERQRERERGMRDATY-KTFKAKGEFTRTR 310



>UniRef100_Q1ZF07 Pseudouridine synthase n=1 Tax=Psychromonas sp.
           CNPT3 RepID=Q1ZF07_9GAMM
          Length = 292

 Score =  275 bits (703), Expect = 4e-72
 Identities = 143/281 (50%), Positives = 190/281 (67%), Gaps = 13/281 (4%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP--REAE 65
           RLNKYIS+SG CSRREAD+ IE+  V +NG    +G +V PGD+V V+G+ I        
Sbjct: 8   RLNKYISDSGFCSRREADKLIEKSRVKINGTIPELGTKVLPGDIVLVDGRAINAVAENKS 67

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D + IA NKP+GI  TTE   R NI+D + H KR+FPIGRLDK S+GLIFLT+ GD+VNK
Sbjct: 68  DRIYIAYNKPIGITCTTERDVRGNIIDAIRHKKRIFPIGRLDKPSEGLIFLTSDGDIVNK 127

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N H+KEYLVTVDKP++E F+  M  GVPIL T+TK C VK ++ FVF I L QGL
Sbjct: 128 ILRAENAHDKEYLVTVDKPLSERFVERMQRGVPILDTITKPCIVKVQSRFVFSIILTQGL 187

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKP 245
           NRQIRRMCE+ GYEV+ L+RTRIM V+L  +  G+WR+L+  E+ ++ + + +SS   + 
Sbjct: 188 NRQIRRMCEYLGYEVQALQRTRIMQVTLKNLKPGQWRNLSVQEMQEINQAVSHSSKTAQI 247

Query: 246 KAKAKP--------KTAGIKRPVVKMEKTAEKGGRPASNGK 278
              A P        ++   K+  V ++KT  K   P++N +
Sbjct: 248 TTPANPPNTRKIYNQSGSTKKIFVNVKKTKSK---PSANSR 285



>UniRef100_A9KPL1 Pseudouridine synthase n=1 Tax=Clostridium
           phytofermentans ISDg RepID=A9KPL1_CLOPH
          Length = 477

 Score =  274 bits (701), Expect = 6e-72
 Identities = 140/239 (58%), Positives = 181/239 (75%), Gaps = 2/239 (0%)

Query: 4   DSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPRE 63
           + +VR+NKY+SESGICSRREAD  I +G V ++G+ A +G +V PG  V +  +  E   
Sbjct: 16  EKAVRINKYLSESGICSRREADTRIAKGEVTIDGEVAVMGSKVLPGQKVVLGKK--EVSR 73

Query: 64  AEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLV 123
            E +VLIA +KP GIV TTE  E DNI+D++ +S+R++PIGRLDKDS+GLIFLTN+GD+V
Sbjct: 74  EEKMVLIAFHKPKGIVCTTEKREPDNIIDYIKYSQRIYPIGRLDKDSEGLIFLTNNGDIV 133

Query: 124 NKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQ 183
           NKILRAGN HEKEY+VTV+KPIT  F++GM+ GVPIL TVTK C ++      FRI L Q
Sbjct: 134 NKILRAGNHHEKEYIVTVNKPITAAFLKGMAGGVPILDTVTKPCTLEAIDKVTFRIILTQ 193

Query: 184 GLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSE 242
           GLNRQIRRMCEHF Y+V KL R RIMNV+L  + +G +R+LTD EL  + + IE S++E
Sbjct: 194 GLNRQIRRMCEHFDYKVTKLVRIRIMNVNLGRLKVGGYRNLTDKELEGIKEQIELSNNE 252



>UniRef100_C0YIL6 Ribosomal large subunit pseudouridine synthase F
           n=1 Tax=Chryseobacterium gleum ATCC 35910
           RepID=C0YIL6_9FLAO
          Length = 240

 Score =  274 bits (701), Expect = 6e-72
 Identities = 143/235 (60%), Positives = 180/235 (76%), Gaps = 5/235 (2%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLI-EPREAED 66
           R+NKY+SE G CSRR AD+ +E+G + +NGK   +G +V   D+V+V+G+ I EP+E   
Sbjct: 5   RINKYLSEVGYCSRRAADKLLEEGRIKINGKIPELGTKVSDEDLVEVDGKPIREPQEKP- 63

Query: 67  LVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
            V I  NKPVGIV TT+   E++NIVD++NH KR+FPIGRLDK S+GLI LT+ GD+VNK
Sbjct: 64  -VYIVFNKPVGIVCTTDTKREKNNIVDYINHPKRIFPIGRLDKPSEGLILLTSDGDIVNK 122

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N+HEKEYLV VDKPIT +F+  M  GVPIL T+T+KCKV+K     FRI L QGL
Sbjct: 123 ILRARNNHEKEYLVRVDKPITPKFLEKMRNGVPILDTITRKCKVEKIDEMNFRIILTQGL 182

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           NRQIRRMCE+ GYEVKKL+R RIMN+ L  +P+G+WRDLTDDEL  L  L+ +SS
Sbjct: 183 NRQIRRMCEYLGYEVKKLKRIRIMNIKLD-LPVGKWRDLTDDELNTLNALLADSS 236



>UniRef100_A2TNK1 Pseudouridine synthase n=1 Tax=Dokdonia
           donghaensis MED134 RepID=A2TNK1_9FLAO
          Length = 260

 Score =  274 bits (701), Expect = 6e-72
 Identities = 142/252 (56%), Positives = 188/252 (74%), Gaps = 4/252 (1%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           R+NKY+SE+G CSRR AD+ I+QG V +NGK   +G ++  GD V+VNG+LI     E  
Sbjct: 8   RINKYLSEAGYCSRRAADKLIDQGRVTINGKVPEMGTKITEGDEVRVNGELITS-STEKP 66

Query: 68  VLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           V IALNKPVGIV TT+   E+DNI+DF+N+  R+FPIGRLDK S+GLIFLTN GD+VNKI
Sbjct: 67  VYIALNKPVGIVCTTDTRVEKDNIIDFINYPSRIFPIGRLDKPSEGLIFLTNDGDIVNKI 126

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N+HEKEY V VDKPIT  FI+ MS GVPIL TVT+KC V++ + F F+I L QGLN
Sbjct: 127 LRARNNHEKEYEVWVDKPITPSFIQQMSNGVPILDTVTRKCHVEQLSRFSFKIILTQGLN 186

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKPK 246
           RQIRRMCE   YEV +L+R RIMN+ L  +P+G+WR ++D E+ ++ +L+E+ S++    
Sbjct: 187 RQIRRMCEALDYEVTRLKRNRIMNIELD-VPVGKWRYISDTEMEEINRLVED-SAKTHTD 244

Query: 247 AKAKPKTAGIKR 258
           A  +P+   ++R
Sbjct: 245 APKEPRHPNLRR 256



>UniRef100_B6FUK1 Pseudouridine synthase n=1 Tax=Clostridium nexile
           DSM 1787 RepID=B6FUK1_9CLOT
          Length = 253

 Score =  274 bits (700), Expect = 8e-72
 Identities = 137/244 (56%), Positives = 190/244 (77%), Gaps = 3/244 (1%)

Query: 4   DSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPRE 63
           +++VRLNK++SE+G+CSRREADR IE G V ++GKRA +G +V P   V V  +  E R+
Sbjct: 8   ETTVRLNKFLSEAGVCSRREADRLIENGKVTVDGKRAEMGMRVSPSQRVCVGKK--EVRQ 65

Query: 64  AEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLV 123
             ++VL+A+NKPVGIV T E  E++NI+ F+N+  RV  IGRLDKDS+GL+ +TN+GD++
Sbjct: 66  KNEMVLLAVNKPVGIVCTEEKKEKNNIIRFLNYPTRVTYIGRLDKDSEGLLLMTNNGDII 125

Query: 124 NKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQ 183
           NK++RAGN HEKEY VTV+KP+T+EFI  M+ GVPIL TVT+KCKV+    + FRI L Q
Sbjct: 126 NKMMRAGNQHEKEYKVTVNKPVTKEFIEKMAEGVPILDTVTRKCKVEMLGKYKFRIILTQ 185

Query: 184 GLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSE- 242
           GLNRQIRRMCE+ GY+V +LER R+MN++L  +  GE+R +T+ E+  L++LI++SS+E 
Sbjct: 186 GLNRQIRRMCEYLGYKVTRLERIRVMNITLGELKPGEYRKVTEAEIQKLYELIKDSSNET 245

Query: 243 VKPK 246
           V PK
Sbjct: 246 VIPK 249



>UniRef100_B2Q7M7 Pseudouridine synthase n=1 Tax=Exiguobacterium sp.
           AT1b RepID=B2Q7M7_9BACL
          Length = 236

 Score =  273 bits (699), Expect = 1e-71
 Identities = 139/236 (58%), Positives = 174/236 (73%), Gaps = 2/236 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISESG  SRR+ADR +E+G V +NGK+A IGDQVKPGD V VNG +   R A +
Sbjct: 1   MRINKFISESGKASRRQADRLVEEGRVTINGKKAKIGDQVKPGDEVLVNGSVA--RVARN 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA++KPVGI STTE   + N+VD VNH  R+F IGRLDKDS+GLI +TN GD+VN+I
Sbjct: 59  NVYIAVHKPVGITSTTEKKVKGNLVDMVNHPLRIFNIGRLDKDSEGLILMTNDGDIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA  +HEKEY+V+VDKPIT EF+  M AGV ILG  T  CKV+  + F F ITL QGLN
Sbjct: 119 LRAEGEHEKEYIVSVDKPITPEFVEQMEAGVKILGQKTLPCKVRPLSKFDFNITLTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSE 242
           RQIRRMCE  GYEV +L+R R+MN++L  +P G+WRDL+  E   LF+ +     E
Sbjct: 179 RQIRRMCEALGYEVFRLQRVRVMNITLGKLPPGQWRDLSKKEREQLFRELNYEPKE 234



>UniRef100_B1DKA5 Pseudouridine synthase n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=B1DKA5_9BACL
          Length = 233

 Score =  273 bits (699), Expect = 1e-71
 Identities = 135/227 (59%), Positives = 174/227 (76%), Gaps = 2/227 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G CSRREAD+ ++ G V +NG +A +G Q + GD V+++G+ I   E + 
Sbjct: 1   MRINKFISETGYCSRREADKLVDSGRVTINGAKAELGSQAELGDDVRIDGKRIG--EQKH 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI STTE   R NIVDFV H +R+FPIGRLDKDS+GLI LTN GD+VN I
Sbjct: 59  HVYIALNKPVGITSTTELHIRGNIVDFVGHKERIFPIGRLDKDSEGLILLTNDGDVVNPI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LR+   HEKEY+VTVD+P+T EF++GMS+GV ILG++T  C+V + A  VFRI L +G N
Sbjct: 119 LRSEGKHEKEYIVTVDRPVTAEFVKGMSSGVRILGSMTLPCQVTRVAERVFRIVLTEGKN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           RQIRRMCE FGY V+KL+R RIMN+ L  +P G+WRDLT+ E  +LF
Sbjct: 179 RQIRRMCEAFGYHVRKLQRIRIMNIHLGQLPTGKWRDLTETEKAELF 225



>UniRef100_B6EH90 Pseudouridine synthase n=1 Tax=Aliivibrio
           salmonicida LFI1238 RepID=B6EH90_ALISL
          Length = 314

 Score =  271 bits (693), Expect = 5e-71
 Identities = 137/243 (56%), Positives = 177/243 (72%), Gaps = 2/243 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNKYIS++G CSRREAD+ I+Q  + +NG    +G +V  GD V V+G+ ++ ++  + 
Sbjct: 10  RLNKYISDTGYCSRREADKLIDQQRITINGNVPEMGTKVAEGDDVLVDGKPLKAKQ--ER 67

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           + IA NKPVGI  T+E     NI+D++NH +R+FPIGRLDK S GLIFLT+ GD+VNKIL
Sbjct: 68  IYIAFNKPVGITCTSERHVEGNIIDYINHEQRIFPIGRLDKPSDGLIFLTSDGDIVNKIL 127

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN HEKEY+V VDKPIT++F+  M+AGVPIL TVT  C+VK+E+ FVFRITL QGLNR
Sbjct: 128 RAGNAHEKEYVVRVDKPITDDFLAQMAAGVPILDTVTLPCQVKQESRFVFRITLTQGLNR 187

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKPKA 247
           QIRRMCE+  YEV KL+R RIMN+ L  +  GEWR LT  E+  +  +I  SS   +   
Sbjct: 188 QIRRMCEYLDYEVFKLKRVRIMNIDLGTLASGEWRYLTASEMEQINNMIGTSSKTEEASR 247

Query: 248 KAK 250
           K K
Sbjct: 248 KVK 250



>UniRef100_Q487V0 Pseudouridine synthase n=1 Tax=Colwellia
           psychrerythraea 34H RepID=Q487V0_COLP3
          Length = 314

 Score =  270 bits (691), Expect = 9e-71
 Identities = 140/251 (55%), Positives = 176/251 (70%), Gaps = 2/251 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP--REAE 65
           RLNKYIS+SG CSRR AD+ IE   V +N K   +G +V  GDVVKV+G  I P   +  
Sbjct: 14  RLNKYISDSGFCSRRSADKMIEANRVTINDKVPELGTKVLAGDVVKVDGYDIAPISDDKS 73

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D + IA NKP+GI  TTE   R NI+D + H KR+FPIGRLDK S+GLIFLT+ GD+VNK
Sbjct: 74  DRIYIAYNKPIGITCTTEKHVRGNIIDAIGHKKRIFPIGRLDKPSEGLIFLTSDGDIVNK 133

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N H+KEY+VTVDKPI+E FI  MS GVPILGT+TK C V+ ++ F F I L QGL
Sbjct: 134 ILRAENAHDKEYIVTVDKPISERFIERMSRGVPILGTITKPCIVQVKSRFEFTIILTQGL 193

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKP 245
           NRQIRRMCE+  YEV KL+R+RIM V L  +  G+WR+LT  E+ ++ + +E SS     
Sbjct: 194 NRQIRRMCEYLDYEVLKLKRSRIMKVELGDLTPGQWRELTITEMAEINQAVEGSSKTAIN 253

Query: 246 KAKAKPKTAGI 256
            A+ K  T+ +
Sbjct: 254 TAQPKQTTSSM 264



>UniRef100_A8VS89 Pseudouridine synthase n=1 Tax=Bacillus
           selenitireducens MLS10 RepID=A8VS89_9BACI
          Length = 237

 Score =  270 bits (691), Expect = 9e-71
 Identities = 138/228 (60%), Positives = 172/228 (75%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           +VR+NKY+SE+G  SRR AD+ I++G V +NGK A +GDQV+PGD V VNG+ +     +
Sbjct: 2   NVRINKYVSETGKTSRRGADKLIQEGKVTINGKPAQLGDQVEPGDDVIVNGEPVHI--VK 59

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           + V IALNKPVGI STTE   + NI+D VNH  R+F IGRLDKDS+GLI LTN GD+VN+
Sbjct: 60  ENVYIALNKPVGITSTTERKVKGNIIDLVNHPLRIFHIGRLDKDSEGLILLTNDGDIVNE 119

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+VTV+KPIT EF++ MS GV IL T T  CKVKK + + F ITL QGL
Sbjct: 120 ILRAENKHEKEYIVTVNKPITPEFLKQMSEGVDILDTTTLPCKVKKLSKYEFNITLTQGL 179

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMC+  GY+V++L RTRIMN+ L  +P G+WRDL+  E   LF
Sbjct: 180 NRQIRRMCDALGYDVQRLLRTRIMNIHLGKLPPGQWRDLSKKERTQLF 227



>UniRef100_A0XYG2 Pseudouridine synthase n=1 Tax=Alteromonadales
           bacterium TW-7 RepID=A0XYG2_9GAMM
          Length = 338

 Score =  270 bits (691), Expect = 9e-71
 Identities = 151/290 (52%), Positives = 194/290 (66%), Gaps = 15/290 (5%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+ISE+G CSRREAD+YIEQG V +NG    +G +V   DVV V+G+ ++       
Sbjct: 23  RLNKFISETGFCSRREADKYIEQGRVSVNGNAPEMGVKVAATDVVLVDGKPLKTPPKR-- 80

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           V IA NKPVGI  TTE   + NIV  VN+  R+FPIGRLD+ S+GLIFLTN GD+VNKIL
Sbjct: 81  VYIAYNKPVGITCTTERKIQSNIVKAVNYPDRIFPIGRLDRPSEGLIFLTNEGDIVNKIL 140

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+VTVDKP+  +F+  M+ G+PIL TVTKKCKV + AP  F+I L QGLNR
Sbjct: 141 RAGNNHEKEYVVTVDKPLNRQFVSKMANGIPILDTVTKKCKVTQTAPKEFKIILTQGLNR 200

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTD-------DELIDLFKLIENS- 239
           QIRRMCE+ GYEV  L+RTRIMNV+L G+ +G+WR L+D       D + D  K  E+S 
Sbjct: 201 QIRRMCEYLGYEVVTLKRTRIMNVTLKGLKVGQWRHLSDVEMAQINDSIADSGKTQEHSL 260

Query: 240 --SSEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKK 287
             + +V   A   PK    +    +  K  E+G    +N  R  +P +K+
Sbjct: 261 DTNKQVDKNAVISPK-RDFQGENPRRNKQKERGDEQKNN--RTNAPYQKR 307



>UniRef100_Q31A32 Pseudouridine synthase n=1 Tax=Prochlorococcus
           marinus str. MIT 9312 RepID=Q31A32_PROM9
          Length = 240

 Score =  270 bits (690), Expect = 1e-70
 Identities = 136/236 (57%), Positives = 177/236 (75%), Gaps = 2/236 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + R+NKY+SE G CSRR+ADR IE+G V +NGK   IG +V+ GD V+V GQ I+    +
Sbjct: 2   ATRINKYLSEVGYCSRRKADRLIEEGKVTINGKIPEIGAKVEDGDQVEVEGQRIKKSTKQ 61

Query: 66  DLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
             + +A NKP+G+V TT+ G E DNI+DF+ + KR+FPIGRLDK S+GLIFLTN GD+VN
Sbjct: 62  KNIYLAFNKPIGVVCTTDRGVEPDNIIDFIKYPKRIFPIGRLDKSSEGLIFLTNDGDIVN 121

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRA N+HEKEY+V+V++PI  EFI+ MS GV IL T TK C VKK  P  F+I L QG
Sbjct: 122 KILRARNNHEKEYIVSVNRPINREFIQTMSNGVEILETKTKNCFVKKLGPKKFKIILTQG 181

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LNRQIRRMCE  GY V+ L+R RIMN+ L  +P+G++R+ T +E+ DL  L++NSS
Sbjct: 182 LNRQIRRMCESLGYRVQSLKRVRIMNIKLD-LPIGKYREFTKEEISDLNALLKNSS 236



>UniRef100_B3KK95 Pseudouridine synthase n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=B3KK95_9BACI
          Length = 233

 Score =  269 bits (688), Expect = 2e-70
 Identities = 132/230 (57%), Positives = 172/230 (74%), Gaps = 2/230 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G CSRREAD+ +E G V +NG  A +G Q + GD V++ G+ ++ ++   
Sbjct: 1   MRINKFISETGYCSRREADKLVESGKVTINGVVAVLGSQAEEGDDVRIQGKPLQDKKKH- 59

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI STTE   + NIVDFV H++R+FPIGRLDKDS+GLI LTN GD+VNKI
Sbjct: 60  -VYIALNKPVGITSTTESHIKGNIVDFVGHNERIFPIGRLDKDSEGLILLTNDGDIVNKI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LR+   HEKEY+VTVD+P+TE F+RGM+ GV ILG +T  C+V + +  VFRI L +G N
Sbjct: 119 LRSEGKHEKEYIVTVDRPVTESFLRGMAGGVKILGEMTLPCEVTRMSERVFRIILTEGKN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLI 236
           RQIRRMC  FGYEV+KL+R RIMN+ L    +G WRDL D E  +L +L+
Sbjct: 179 RQIRRMCSAFGYEVRKLQRIRIMNIRLGSQRIGSWRDLNDKEKEELGRLL 228



>UniRef100_A6GYY2 Pseudouridine synthase n=1 Tax=Flavobacterium
           psychrophilum JIP02/86 RepID=A6GYY2_FLAPJ
          Length = 266

 Score =  268 bits (685), Expect = 4e-70
 Identities = 144/268 (53%), Positives = 194/268 (72%), Gaps = 6/268 (2%)

Query: 2   LPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP 61
           + ++  R+NK++SE+G CSRREAD+ +++G + +NG    +G +V   D V+V+G+L+  
Sbjct: 1   MEENLTRINKFLSETGHCSRREADKLLDEGRITINGIVPEMGTKVSHHDEVRVDGKLVRE 60

Query: 62  REAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGD 121
           +  E  V +A NKPVGI  TT    R NIVDF+N+ KR+FPIGRLDK S+GLIF+TN GD
Sbjct: 61  K-TEKPVYLAFNKPVGIECTTNLDVRYNIVDFINYPKRIFPIGRLDKASEGLIFMTNDGD 119

Query: 122 LVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITL 181
           +VNKILRA N+HEKEY VTV+K IT+ FI+ MS G+PIL TVTKKCKV++ +   F+I L
Sbjct: 120 IVNKILRARNNHEKEYTVTVNKLITDRFIQKMSNGIPILDTVTKKCKVEQISKTTFKIVL 179

Query: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS 241
            QGLNRQIRRMCE+ GYEV  L+R RI+N+SL  IP+G +RDLTD E+ +L  LIE SS 
Sbjct: 180 TQGLNRQIRRMCEYLGYEVTSLKRIRIINISLD-IPVGRYRDLTDAEITELNNLIEPSSK 238

Query: 242 EVK---PKAKA-KPKTAGIKRPVVKMEK 265
             +   PK +A K +   IKR  ++ +K
Sbjct: 239 TEEASFPKVEAPKRRIEFIKRDDLRFKK 266



>UniRef100_A2BRY4 Pseudouridine synthase n=1 Tax=Prochlorococcus
           marinus str. AS9601 RepID=A2BRY4_PROMS
          Length = 240

 Score =  268 bits (685), Expect = 4e-70
 Identities = 137/236 (58%), Positives = 176/236 (74%), Gaps = 2/236 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + R+NKY+SE G CSRREADR I  G V +NGK   IG +V+  D V+V GQ IE  + +
Sbjct: 2   ATRINKYLSEVGYCSRREADRLILDGKVTINGKIPEIGTKVEDSDQVEVKGQRIEKSKRQ 61

Query: 66  DLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
             + +A NKPVGIV TT+   E DN++DF+ + KR+FPIGRLDK S+GLIFLTN GD+VN
Sbjct: 62  KNIYLAFNKPVGIVCTTDRKVEPDNVIDFIKYPKRIFPIGRLDKLSEGLIFLTNDGDIVN 121

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRA N+HEKEY+V V++PI  +FI+ MS GV ILGT+TK C VK+  P  F+I L QG
Sbjct: 122 KILRARNNHEKEYIVKVNRPINNDFIQSMSNGVEILGTITKNCFVKQLGPRNFKIILTQG 181

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LNRQIRRMCE  GY V+ L+R RIMN+ L  +P GE+R+L  +EL++L +L+ENSS
Sbjct: 182 LNRQIRRMCEALGYRVQSLKRIRIMNIKLD-VPTGEYRELRKEELLELNELLENSS 236



>UniRef100_A2BXF0 Pseudouridine synthase n=1 Tax=Prochlorococcus
           marinus str. MIT 9515 RepID=A2BXF0_PROM5
          Length = 240

 Score =  268 bits (684), Expect = 6e-70
 Identities = 137/236 (58%), Positives = 176/236 (74%), Gaps = 2/236 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + R+NKY+SE G CSRR ADR IE+G V +NGK + IG +VK  D V+V G +I+    +
Sbjct: 2   ATRINKYLSEVGYCSRRVADRLIEEGKVTINGKISEIGTKVKEDDQVEVEGIIIDKPTKQ 61

Query: 66  DLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
             + +A NKPVGIV TT+   E DNI+DF+N+S R+FPIGRLDK+S+GLIFLTN GD+VN
Sbjct: 62  KYIYLAFNKPVGIVCTTDRRVEPDNIIDFINYSTRIFPIGRLDKNSEGLIFLTNDGDIVN 121

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRA N+HEKEY+V+V++PI  +FI  MS GV IL T+TK C VK+     F+I L QG
Sbjct: 122 KILRARNNHEKEYIVSVNRPINRDFIHNMSNGVKILDTITKNCFVKQLGVKKFKIILTQG 181

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LNRQIRRMCE  GY V+ L+R RIMN+ L  IP G++R+ T DEL++L  L+ENSS
Sbjct: 182 LNRQIRRMCESLGYRVQSLKRIRIMNIKLD-IPTGKYREFTKDELLELSGLLENSS 236



>UniRef100_B5CLI6 Pseudouridine synthase n=1 Tax=Ruminococcus
           lactaris ATCC 29176 RepID=B5CLI6_9FIRM
          Length = 266

 Score =  268 bits (684), Expect = 6e-70
 Identities = 135/235 (57%), Positives = 179/235 (76%), Gaps = 2/235 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNKY+SE+G+CSRREADR IE G V ++GKRA +G ++ PG  VKV  + +  ++  +
Sbjct: 16  VRLNKYLSEAGVCSRREADRLIETGKVSVDGKRAGMGMKIYPGQTVKVGNKTVSRQD--E 73

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           ++++A+NKP GIV T E  ERD+IV F+N+  RV  IGRLDKDS+GL+ +TN+GD++NKI
Sbjct: 74  MIVLAVNKPKGIVCTEERRERDSIVRFLNYPVRVTYIGRLDKDSRGLLLMTNNGDIINKI 133

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           +RA N HEKEY VTVD  ITE+F++ MS GV IL TVT+ CKV+K   + F+I L QGLN
Sbjct: 134 MRAANYHEKEYKVTVDHEITEDFLKKMSRGVAILDTVTRPCKVEKLGKYTFKIILTQGLN 193

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS 241
           RQIRRMCE  GYEVK L R R+MN++L G+  G++R LTD EL +L +L+E SSS
Sbjct: 194 RQIRRMCEALGYEVKDLLRVRVMNITLDGLKEGKYRKLTDRELNELDQLLEQSSS 248



>UniRef100_Q7V232 Pseudouridine synthase n=1 Tax=Prochlorococcus
           marinus subsp. pastoris str. CCMP1986 RepID=Q7V232_PROMP
          Length = 240

 Score =  267 bits (682), Expect = 1e-69
 Identities = 135/236 (57%), Positives = 174/236 (73%), Gaps = 2/236 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + R+NKY+SE G CSRR AD  IE+G V +NG+   +G +V+ GD V+V GQ IE     
Sbjct: 2   ATRINKYLSEVGYCSRRVADSLIEEGKVTINGEIPEMGTKVEEGDQVEVEGQRIEKSMKH 61

Query: 66  DLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
           + + +  NKPVGIV TT+   E DNI+DF+ +  R+FPIGRLDK S+GLIFLTN GD+VN
Sbjct: 62  EKIYLVFNKPVGIVCTTDRRVESDNIIDFIKYPTRIFPIGRLDKPSEGLIFLTNDGDIVN 121

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRA N+HEKEY+V+V++PI  +FI+ MS GV ILGT+TK C VK+  P  FRI L QG
Sbjct: 122 KILRARNNHEKEYIVSVNRPINRDFIQSMSNGVEILGTITKNCFVKQLGPKKFRIILTQG 181

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LNRQIRRMCE  G+ VK L+R RIMN+ L  + +GE+R+ T +EL +L KL+ENSS
Sbjct: 182 LNRQIRRMCESLGFRVKSLKRVRIMNIKLD-VSIGEYREFTKEELFELNKLLENSS 236



>UniRef100_A9DKT0 Pseudouridine synthase n=1 Tax=Kordia algicida
           OT-1 RepID=A9DKT0_9FLAO
          Length = 244

 Score =  267 bits (682), Expect = 1e-69
 Identities = 135/235 (57%), Positives = 182/235 (77%), Gaps = 5/235 (2%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLI-EPREAED 66
           R+NK++SE+G CSRR AD+ IEQ  V +NG    +G ++ PGD V+V+G+LI +P+E   
Sbjct: 8   RINKFLSEAGYCSRRAADKLIEQRRVTINGVVPAMGTKIAPGDEVRVDGELISDPKEKP- 66

Query: 67  LVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
            V +A NKP+GIV TT+   E+DNI+D++N+  R+FPIGRLDK S+GLIFLT+ GD+VNK
Sbjct: 67  -VYLAFNKPIGIVCTTDTKVEKDNIIDYINYPSRIFPIGRLDKPSEGLIFLTSDGDIVNK 125

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N+HEKEY VTV++PIT +FI+ M  G+PILGT+T+KCKV++   + F+I L QGL
Sbjct: 126 ILRARNNHEKEYEVTVNRPITSDFIQKMGNGIPILGTLTRKCKVEQLTKYTFKIILTQGL 185

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           NRQIRRMCE+  Y V KL+RTRIMNVSL  IP+G+WR LT++EL  +  L + S+
Sbjct: 186 NRQIRRMCEYLDYRVVKLKRTRIMNVSLD-IPVGKWRHLTEEELQGINDLTKAST 239



>UniRef100_A7AXZ9 Pseudouridine synthase n=1 Tax=Ruminococcus gnavus
           ATCC 29149 RepID=A7AXZ9_RUMGN
          Length = 252

 Score =  266 bits (681), Expect = 1e-69
 Identities = 132/236 (55%), Positives = 182/236 (77%), Gaps = 2/236 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           VRLNKY+SE+G+CSRREADR IE G V ++GKRA  G ++ PG VVKV  +++  ++  +
Sbjct: 16  VRLNKYLSEAGVCSRREADRLIESGRVSVDGKRAQTGMKIVPGQVVKVGKKVVSKQD--E 73

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           +V++A+NKP GIV T E  ER++IV F+++  R+  +GRLDKDS+GL+ +TN+GD++NK+
Sbjct: 74  MVVLAVNKPAGIVCTEERRERNSIVRFLDYPIRITYVGRLDKDSKGLLLMTNNGDIINKM 133

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           +RAGN HEKEY VTVDK IT+EF+  M++GVPIL TVT+ CKV+K   + F I L QGLN
Sbjct: 134 MRAGNRHEKEYKVTVDKEITQEFLEKMASGVPILDTVTRPCKVEKIGKYTFSIILTQGLN 193

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSE 242
           RQIRRMCE  GY+V++L R RIMN+ L  +  GE+R LTD EL +L+  I++SS+E
Sbjct: 194 RQIRRMCEALGYQVRELIRVRIMNIHLGRLKEGEYRKLTDAELNELYDQIKDSSNE 249



>UniRef100_A3UB21 Pseudouridine synthase n=1 Tax=Croceibacter
           atlanticus HTCC2559 RepID=A3UB21_9FLAO
          Length = 244

 Score =  266 bits (681), Expect = 1e-69
 Identities = 134/235 (57%), Positives = 180/235 (76%), Gaps = 4/235 (1%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPG-DVVKVNGQLIEPREAE 65
           +R+NKY +  G CSRR+AD+ IE G V +NGKR  +G ++ P  D V+VNG+L+  +E E
Sbjct: 4   IRINKYFTTIGFCSRRKADKLIEAGYVTVNGKRPEMGQKIDPAKDKVRVNGKLVG-QEEE 62

Query: 66  DLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
             V +  NKPVGIV TT+   E+DNI+D++N+  R+FPIGRLDK S+GLIFLTN GD+VN
Sbjct: 63  KPVYLVFNKPVGIVCTTDTHVEKDNIIDYINYPSRIFPIGRLDKPSEGLIFLTNDGDIVN 122

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRA N HEKEY+VTVD+ I+++F+  M +G+PIL TVT++C+V+K   ++F+I L QG
Sbjct: 123 KILRARNHHEKEYIVTVDRVISDDFVNRMKSGIPILDTVTRECEVEKITDYMFKIVLTQG 182

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
           LNRQIRRMCE+ GYEV  L+R RIMNV+L  IP+GE+RD TD E  +L  L+E+S
Sbjct: 183 LNRQIRRMCEYLGYEVLTLKRIRIMNVTLD-IPVGEYRDFTDQEFKELQDLLEDS 236



>UniRef100_B7Y5E1 Pseudouridine synthase n=1 Tax=Blautia hansenii
           DSM 20583 RepID=B7Y5E1_RUMHA
          Length = 271

 Score =  266 bits (680), Expect = 2e-69
 Identities = 133/282 (47%), Positives = 190/282 (67%), Gaps = 21/282 (7%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +RLNKY+S++G+CSRREADR IE+  V ++GK A  G QV+    +KV+G+ I+  E + 
Sbjct: 1   MRLNKYLSDAGVCSRREADRLIEEKRVLVDGKPAVQGMQVEDFQEIKVDGKAIKREEKK- 59

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            VL+  +KP GI  T     + N++ ++N+  RV+  GRLDKDS+GL+ LTN G+LVN+I
Sbjct: 60  -VLLVFHKPKGIECTANPNVKKNVISYINYPIRVYYAGRLDKDSEGLLLLTNQGELVNQI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           ++AG+ HEKEYLVTVDKP+TEEF++ M  GVP+LGT+T+KCKV+KE+  VFRITL QGLN
Sbjct: 119 MKAGSYHEKEYLVTVDKPVTEEFLQSMREGVPVLGTITRKCKVEKESEKVFRITLTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKPK 246
           RQIRRMC + GYEV KL+R RIMN+ L  +P+G +R+ T +EL +L + I   + +    
Sbjct: 179 RQIRRMCNYLGYEVVKLKRIRIMNIELGNLPIGSYREATKEELDELKRQISEKAEK---- 234

Query: 247 AKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKK 288
                          + E    KG +P  N  ++ +P + +K
Sbjct: 235 ---------------RQETDFHKGKKPVKNAGKYRNPSKVRK 261



>UniRef100_Q3IC94 Pseudouridine synthase n=1 Tax=Pseudoalteromonas
           haloplanktis TAC125 RepID=Q3IC94_PSEHT
          Length = 327

 Score =  266 bits (679), Expect = 2e-69
 Identities = 145/284 (51%), Positives = 187/284 (65%), Gaps = 5/284 (1%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK+IS++G CSRREAD+YIE G V +NG R  +G +V   DVV V+G+ +  +     
Sbjct: 6   RLNKFISDTGFCSRREADKYIEDGRVTVNGIRPEMGVKVSSTDVVLVDGKTL--KAIPKR 63

Query: 68  VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKIL 127
           V IA NKPVGI  TTE   + NIV  VN+  R+FPIGRLD+ S+GLIFLTN GD+VNKIL
Sbjct: 64  VYIAYNKPVGITCTTERKIQSNIVKAVNYPDRIFPIGRLDRPSEGLIFLTNEGDIVNKIL 123

Query: 128 RAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNR 187
           RAGN+HEKEY+VTVDKP+  +F+  M  GVPIL T+TKKCKV +     F I L QGLNR
Sbjct: 124 RAGNNHEKEYVVTVDKPLNRQFVAKMGNGVPILDTITKKCKVTQTGAQQFTIILTQGLNR 183

Query: 188 QIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKPKA 247
           QIRRMCE+ GYEV  L+R RIMNV+L G+ +G+WR LT+ E+  +   I +S    +   
Sbjct: 184 QIRRMCEYLGYEVVTLKRVRIMNVTLKGLKVGQWRHLTEQEMAIINNSISDSGKTQEHSV 243

Query: 248 KAKPKTAGIKRP--VVKMEKTAE-KGGRPASNGKRFTSPGRKKK 288
             +      + P  V K +KT++ K      N KRF    R ++
Sbjct: 244 YDEANALQQQSPQAVAKPQKTSDKKRDFQGENPKRFNQGERTEE 287



>UniRef100_A2C3A6 Pseudouridine synthase n=2 Tax=Prochlorococcus
           marinus RepID=A2C3A6_PROM1
          Length = 240

 Score =  265 bits (678), Expect = 3e-69
 Identities = 135/236 (57%), Positives = 175/236 (74%), Gaps = 2/236 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + R+NKY+SE G CSRR ADR IE+G V +NGK    G +V+ GD VKV+GQ IE    +
Sbjct: 2   ATRINKYLSEVGYCSRRVADRLIEEGKVVINGKIPEKGTKVEEGDQVKVDGQRIEKSTKQ 61

Query: 66  DLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
             + +A NKPVGIV TT+   E DNI+DF+ +  R+FPIGRLDK S+GLIFLTN GD+VN
Sbjct: 62  KNIYLAFNKPVGIVCTTDRRVEHDNIIDFIKYPTRIFPIGRLDKPSEGLIFLTNDGDIVN 121

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRA N+HEKEY+V+V++PI  +FI+ MS GV IL T+TK C VK+     F+I L QG
Sbjct: 122 KILRARNNHEKEYIVSVNRPINRDFIQSMSNGVEILETITKNCFVKQLGAKKFKIILTQG 181

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LNRQIRRMCE  GY V+ L+R RIMN+ L  +P+G++R+ T +EL++L  L+ENSS
Sbjct: 182 LNRQIRRMCESLGYRVESLKRVRIMNIKLD-VPIGKYREFTKEELLELNGLLENSS 236



>UniRef100_C2W7Y2 Pseudouridine synthase n=1 Tax=Bacillus cereus
           Rock3-44 RepID=C2W7Y2_BACCE
          Length = 238

 Score =  265 bits (678), Expect = 3e-69
 Identities = 135/228 (59%), Positives = 171/228 (75%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISESG  SRR AD+ I +  V +NGK A IGDQV+PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISESGKASRRGADKLINERRVIINGKVAKIGDQVQPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  RV  +GRLDKDS GLI LTN GD++N+
Sbjct: 61  DHVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRVNHVGRLDKDSDGLILLTNDGDIINE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT EF++ M+AGV ILGT T  C++ + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPEFLKQMAAGVKILGTKTLPCEITQLSKYEFQIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIQLNNLPVGQWRDLTKKEKKRLF 228



>UniRef100_A5Z9H6 Pseudouridine synthase n=1 Tax=Eubacterium
           ventriosum ATCC 27560 RepID=A5Z9H6_9FIRM
          Length = 245

 Score =  265 bits (678), Expect = 3e-69
 Identities = 133/231 (57%), Positives = 168/231 (72%), Gaps = 2/231 (0%)

Query: 4   DSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPRE 63
           D  +RLNK++S++G CSRREADR +EQG V +NGK A +G +V   D + V G+ I   E
Sbjct: 14  DEQIRLNKFLSDAGYCSRREADRLVEQGVVKVNGKTAVMGQKVTINDSIMVKGKNISREE 73

Query: 64  AEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLV 123
            +  +LIALNKPVGI  TT+    DNIVDF+N  KRV+PIGRLDK+SQGLI LTN G +V
Sbjct: 74  EQ--ILIALNKPVGIECTTDLNNPDNIVDFINFDKRVYPIGRLDKNSQGLILLTNDGSIV 131

Query: 124 NKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQ 183
           N IL+  N HEKEY+VTVDKP+T++FI+ MS GV IL  VT+ CKV K    VF I L Q
Sbjct: 132 NNILKGSNYHEKEYVVTVDKPVTDDFIKKMSTGVRILDQVTRPCKVTKVKKHVFNIVLTQ 191

Query: 184 GLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFK 234
           GLNRQIRRMC   GY V+KL+R RIMN+ L  +P+G++R +TD EL +L +
Sbjct: 192 GLNRQIRRMCGELGYNVQKLKRIRIMNIELGNLPVGQYRKVTDSELKELMR 242



>UniRef100_A8UGS6 Pseudouridine synthase n=1 Tax=Flavobacteriales
           bacterium ALC-1 RepID=A8UGS6_9FLAO
          Length = 255

 Score =  265 bits (677), Expect = 4e-69
 Identities = 141/255 (55%), Positives = 185/255 (72%), Gaps = 9/255 (3%)

Query: 2   LPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP 61
           + D+  RLNKY+SE+G CSRREADR I+ G V +N     +G +V  GD+VKV+G++I  
Sbjct: 1   MSDNLTRLNKYLSEAGYCSRREADRLIDAGRVTINDVVPEMGTKVASGDIVKVDGEIIGE 60

Query: 62  REAEDLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
           R+ +  V +A NKPVGIV TT+   E+DNI+D++N+ KR+FPIGRLDK S+GLI LT+ G
Sbjct: 61  RK-QGFVYLAFNKPVGIVCTTDTRVEKDNIIDYINYPKRIFPIGRLDKPSEGLILLTDDG 119

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPI--LGTVTKKCKVKKEAPFVFR 178
           D+VNKILRA N+HEKEY+VTVDKPI++ F+  M+ G+ I  LG  TKKC+VKK   F F 
Sbjct: 120 DIVNKILRASNNHEKEYIVTVDKPISQTFVARMAGGIYIEELGKRTKKCEVKKIDKFTFS 179

Query: 179 ITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIEN 238
           I L QGLNRQIRRMCE+  YEV+ L+R RIMN+ L  +PLG++R+LT +E    FK + N
Sbjct: 180 IILTQGLNRQIRRMCEYLNYEVQTLKRVRIMNIKLD-MPLGKYRELTKEE----FKTLSN 234

Query: 239 SSSEVKPKAKAKPKT 253
             SE K   +AK  T
Sbjct: 235 LISESKKTFEAKQHT 249



>UniRef100_C3ALK7 Pseudouridine synthase n=3 Tax=Bacillus
           RepID=C3ALK7_BACMY
          Length = 235

 Score =  265 bits (676), Expect = 5e-69
 Identities = 134/227 (59%), Positives = 170/227 (74%), Gaps = 2/227 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISESG  SRR AD+ I +  V +NGK A IGDQV+PGD V+VNG+ +  R A D
Sbjct: 1   MRINKFISESGKASRRGADKLINERRVIINGKVAKIGDQVQPGDDVRVNGEQL--RIARD 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  T+E   + NI+D VNH  R+  +GRLDKDS GLI LTN GD++N+I
Sbjct: 59  HVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRINHVGRLDKDSDGLILLTNDGDIINEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V+VDKPIT EF++ M+AGV ILGT T  C++ + + + F+I L QGLN
Sbjct: 119 LRAENKHEKEYIVSVDKPITPEFLKEMAAGVKILGTKTLPCEITQLSKYEFQIILTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           RQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 179 RQIRRMCEALGYQVYTLKRTRIMNIQLNNLPVGQWRDLTKKEKKRLF 225



>UniRef100_Q738H8 Pseudouridine synthase n=1 Tax=Bacillus cereus
           ATCC 10987 RepID=Q738H8_BACC1
          Length = 238

 Score =  263 bits (672), Expect = 1e-68
 Identities = 134/228 (58%), Positives = 169/228 (74%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKXINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFKIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 228



>UniRef100_C3H0W1 Pseudouridine synthase n=1 Tax=Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1
           RepID=C3H0W1_BACTU
          Length = 238

 Score =  263 bits (672), Expect = 1e-68
 Identities = 134/228 (58%), Positives = 169/228 (74%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFKIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 228



>UniRef100_C3C284 Pseudouridine synthase n=2 Tax=Bacillus cereus
           group RepID=C3C284_BACTU
          Length = 238

 Score =  263 bits (672), Expect = 1e-68
 Identities = 134/228 (58%), Positives = 169/228 (74%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFKIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 228



>UniRef100_C2YAH3 Pseudouridine synthase n=4 Tax=Bacillus cereus
           group RepID=C2YAH3_BACCE
          Length = 238

 Score =  263 bits (672), Expect = 1e-68
 Identities = 135/228 (59%), Positives = 169/228 (74%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C+V + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEVTQLSKYEFQIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 228



>UniRef100_C2R7Z9 Pseudouridine synthase n=3 Tax=Bacillus cereus
           RepID=C2R7Z9_BACCE
          Length = 238

 Score =  263 bits (672), Expect = 1e-68
 Identities = 135/228 (59%), Positives = 169/228 (74%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C+V + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEVTQLSKYEFQIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 228



>UniRef100_A0RDY7 Pseudouridine synthase n=11 Tax=Bacillus cereus
           group RepID=A0RDY7_BACAH
          Length = 238

 Score =  263 bits (672), Expect = 1e-68
 Identities = 134/228 (58%), Positives = 169/228 (74%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFKIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 228



>UniRef100_B9J0Q9 Pseudouridine synthase n=3 Tax=Bacillus cereus
           RepID=B9J0Q9_BACCQ
          Length = 238

 Score =  263 bits (672), Expect = 1e-68
 Identities = 134/228 (58%), Positives = 169/228 (74%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFKIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 228



>UniRef100_C0CJ54 Putative uncharacterized protein n=1 Tax=Blautia
           hydrogenotrophica DSM 10507 RepID=C0CJ54_9FIRM
          Length = 262

 Score =  263 bits (672), Expect = 1e-68
 Identities = 130/235 (55%), Positives = 180/235 (76%), Gaps = 3/235 (1%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +RLNKY+S++G+CSRREAD  I QG V ++G++A  G++V     ++V+ +  E R+ + 
Sbjct: 6   IRLNKYLSDAGVCSRREADSLILQGRVTVDGRKAVTGEKVSVDQQIRVDNR--EIRQGQP 63

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            VL+ LNKP GI+ T ++ ++DNIVDFVN+  RV+P+GRLD DSQGLI LTN G+LVNKI
Sbjct: 64  KVLLLLNKPRGIICTAKN-QKDNIVDFVNYPIRVYPVGRLDVDSQGLILLTNQGELVNKI 122

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           +RAGN HEKEY VTVD P+T+EF+  M+ GVPILGTVT+ C++K+     F+I L QGLN
Sbjct: 123 MRAGNYHEKEYQVTVDHPVTKEFLSKMAKGVPILGTVTRPCQIKRTGEKSFQIILTQGLN 182

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS 241
           RQIRRMCE+FGY V +L RTRIMN+ L  +P+G +R++T +E  +L +L+ +SSS
Sbjct: 183 RQIRRMCEYFGYRVVRLNRTRIMNLKLGKLPVGAYREVTSEEWRELQRLLVDSSS 237



>UniRef100_Q3ELE6 Pseudouridine synthase n=1 Tax=Bacillus
           thuringiensis serovar israelensis ATCC 35646
           RepID=Q3ELE6_BACTI
          Length = 254

 Score =  263 bits (671), Expect = 2e-68
 Identities = 134/228 (58%), Positives = 169/228 (74%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 19  NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 76

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 77  DHVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 136

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGL
Sbjct: 137 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFQIILTQGL 196

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 197 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 244



>UniRef100_C2WMA9 Pseudouridine synthase n=4 Tax=Bacillus cereus
           group RepID=C2WMA9_BACCE
          Length = 238

 Score =  263 bits (671), Expect = 2e-68
 Identities = 134/228 (58%), Positives = 169/228 (74%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFQIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 228



>UniRef100_Q813L9 Pseudouridine synthase n=2 Tax=Bacillus cereus
           RepID=Q813L9_BACCR
          Length = 235

 Score =  263 bits (671), Expect = 2e-68
 Identities = 135/227 (59%), Positives = 168/227 (74%), Gaps = 2/227 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A D
Sbjct: 1   MRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIARD 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+I
Sbjct: 59  HVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C+V + + + F+I L QGLN
Sbjct: 119 LRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEVTQLSKYEFQIILTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           RQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 179 RQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 225



>UniRef100_C2N0P1 Pseudouridine synthase n=3 Tax=Bacillus cereus
           group RepID=C2N0P1_BACCE
          Length = 238

 Score =  263 bits (671), Expect = 2e-68
 Identities = 134/228 (58%), Positives = 169/228 (74%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFQIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 228



>UniRef100_B7HR63 Pseudouridine synthase n=2 Tax=Bacillus cereus
           RepID=B7HR63_BACC7
          Length = 235

 Score =  263 bits (671), Expect = 2e-68
 Identities = 134/227 (59%), Positives = 168/227 (74%), Gaps = 2/227 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A D
Sbjct: 1   MRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIARD 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+I
Sbjct: 59  HVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGLN
Sbjct: 119 LRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFKIILTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           RQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 179 RQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 225



>UniRef100_C1EUD5 RNA pseudouridine synthase family protein n=13
           Tax=Bacillus cereus group RepID=C1EUD5_BACC3
          Length = 235

 Score =  263 bits (671), Expect = 2e-68
 Identities = 134/227 (59%), Positives = 168/227 (74%), Gaps = 2/227 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A D
Sbjct: 1   MRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIARD 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+I
Sbjct: 59  HVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGLN
Sbjct: 119 LRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFKIILTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           RQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 179 RQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 225



>UniRef100_B7IW77 Pseudouridine synthase n=1 Tax=Bacillus cereus
           G9842 RepID=B7IW77_BACC2
          Length = 235

 Score =  262 bits (670), Expect = 2e-68
 Identities = 134/227 (59%), Positives = 168/227 (74%), Gaps = 2/227 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A D
Sbjct: 1   MRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIARD 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+I
Sbjct: 59  HVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGLN
Sbjct: 119 LRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFQIILTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           RQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 179 RQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 225



>UniRef100_B5UTX3 Pseudouridine synthase n=2 Tax=Bacillus cereus
           RepID=B5UTX3_BACCE
          Length = 235

 Score =  262 bits (670), Expect = 2e-68
 Identities = 134/227 (59%), Positives = 168/227 (74%), Gaps = 2/227 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A D
Sbjct: 1   MRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIARD 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+I
Sbjct: 59  HVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGLN
Sbjct: 119 LRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFQIILTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           RQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 179 RQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 225



>UniRef100_A3PDR6 Pseudouridine synthase n=1 Tax=Prochlorococcus
           marinus str. MIT 9301 RepID=A3PDR6_PROM0
          Length = 240

 Score =  261 bits (668), Expect = 4e-68
 Identities = 132/236 (55%), Positives = 176/236 (74%), Gaps = 2/236 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + R+NKY+SE G CSRREAD+ I +G V +NG+   IG +V+  D V+V GQ IE  + +
Sbjct: 2   ATRINKYLSEVGYCSRREADKLILEGKVTINGEIPEIGTKVEDNDQVEVKGQRIEKSKRQ 61

Query: 66  DLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
             + +A NKPVGIV TT+   E +N++DF+ + KR+FPIGRLDK S+GLIFLTN GD+VN
Sbjct: 62  KNIYLAFNKPVGIVCTTDKKLEPNNVIDFIKYPKRIFPIGRLDKLSEGLIFLTNDGDIVN 121

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRA N+HEKEY+V V++PI   FI+ MS GV IL T+TK C V++  P  F+I L QG
Sbjct: 122 KILRARNNHEKEYIVKVNRPINSNFIKSMSNGVEILDTITKNCFVEQLGPRNFKIILTQG 181

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LNRQIRRMCE  GY V+ L+R RIMN+ L  +P GE+R+L+ +EL++L +L+ENSS
Sbjct: 182 LNRQIRRMCEALGYRVRSLKRVRIMNIKLD-VPTGEYRELSKEELLELNELLENSS 236



>UniRef100_C2QSX9 Pseudouridine synthase n=1 Tax=Bacillus cereus
           ATCC 4342 RepID=C2QSX9_BACCE
          Length = 238

 Score =  261 bits (668), Expect = 4e-68
 Identities = 133/228 (58%), Positives = 168/228 (73%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+ GV ILGT T  C++ + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMATGVKILGTKTLPCEITQLSKYEFKIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 228



>UniRef100_C2PEY2 Pseudouridine synthase n=3 Tax=Bacillus cereus
           RepID=C2PEY2_BACCE
          Length = 238

 Score =  261 bits (668), Expect = 4e-68
 Identities = 134/228 (58%), Positives = 169/228 (74%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C+V + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEVTQLSKYEFQIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDL+  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLSKKEKRRLF 228



>UniRef100_C2VBN6 Pseudouridine synthase n=1 Tax=Bacillus cereus
           Rock3-29 RepID=C2VBN6_BACCE
          Length = 235

 Score =  261 bits (667), Expect = 5e-68
 Identities = 134/227 (59%), Positives = 168/227 (74%), Gaps = 2/227 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A D
Sbjct: 1   MRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIARD 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+I
Sbjct: 59  HVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C+V + + + F+I L QGLN
Sbjct: 119 LRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEVTQLSKYEFQIILTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           RQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDL+  E   LF
Sbjct: 179 RQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLSKKEKRRLF 225



>UniRef100_B7H5C9 Pseudouridine synthase n=1 Tax=Bacillus cereus
           B4264 RepID=B7H5C9_BACC4
          Length = 235

 Score =  261 bits (666), Expect = 7e-68
 Identities = 133/227 (58%), Positives = 167/227 (73%), Gaps = 2/227 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A D
Sbjct: 1   MRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIARD 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+I
Sbjct: 59  HVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V+VDKPIT +F+  M+ GV ILGT T  C++ + + + F+I L QGLN
Sbjct: 119 LRAENKHEKEYIVSVDKPITPDFLEKMATGVKILGTKTLPCEITQLSKYEFQIILTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           RQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 179 RQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 225



>UniRef100_C2YRK2 Pseudouridine synthase n=1 Tax=Bacillus cereus
           AH1271 RepID=C2YRK2_BACCE
          Length = 248

 Score =  261 bits (666), Expect = 7e-68
 Identities = 133/228 (58%), Positives = 168/228 (73%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 13  NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 70

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 71  DHVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 130

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F I L QGL
Sbjct: 131 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFNIILTQGL 190

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDL+  E   LF
Sbjct: 191 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLSKKEKRRLF 238



>UniRef100_C2QBV8 Pseudouridine synthase n=1 Tax=Bacillus cereus
           R309803 RepID=C2QBV8_BACCE
          Length = 238

 Score =  261 bits (666), Expect = 7e-68
 Identities = 133/228 (58%), Positives = 168/228 (73%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFNIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDL+  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLSKKEKRRLF 228



>UniRef100_C3DJQ9 Pseudouridine synthase n=1 Tax=Bacillus
           thuringiensis serovar sotto str. T04001
           RepID=C3DJQ9_BACTS
          Length = 238

 Score =  259 bits (663), Expect = 2e-67
 Identities = 133/228 (58%), Positives = 168/228 (73%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDK IT +F+  M+AGV ILGT T  C++ + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKSITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFQIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLTKKEKRRLF 228



>UniRef100_C2Z7W9 Pseudouridine synthase n=2 Tax=Bacillus cereus
           RepID=C2Z7W9_BACCE
          Length = 238

 Score =  259 bits (663), Expect = 2e-67
 Identities = 133/228 (58%), Positives = 168/228 (73%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRINHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT EF+  M+AGV IL T T  C++ + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPEFLEKMAAGVKILDTKTLPCEITQLSKYEFKIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDL+  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLSKKEKRRLF 228



>UniRef100_C2PVS8 Pseudouridine synthase n=2 Tax=Bacillus cereus
           RepID=C2PVS8_BACCE
          Length = 238

 Score =  259 bits (663), Expect = 2e-67
 Identities = 134/228 (58%), Positives = 168/228 (73%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERKVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRINHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT EF+  M+AGV IL T T  C+V + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPEFLEKMAAGVKILDTKTLPCEVTQLSKYEFQIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDL+  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLSKKEKKRLF 228



>UniRef100_C0BI67 Pseudouridine synthase n=1 Tax=Flavobacteria
           bacterium MS024-2A RepID=C0BI67_9BACT
          Length = 244

 Score =  259 bits (663), Expect = 2e-67
 Identities = 131/238 (55%), Positives = 178/238 (74%), Gaps = 3/238 (1%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +RLNKY+SE G CSRR ADR IE+G V +NG +  +G +V P D ++V+G L+E  +  +
Sbjct: 8   IRLNKYLSEIGHCSRRAADRLIEEGRVQINGVQVIMGQKVTPLDRIEVDGVLVEDLQERN 67

Query: 67  LVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
            V IA NKP+GIV TT+   E+DNI+D++N+  R+FPIGRLDK S+GLI LTN GD+VNK
Sbjct: 68  -VYIAFNKPIGIVCTTDTRVEKDNIIDYINYPTRIFPIGRLDKPSEGLILLTNDGDIVNK 126

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N+HEKEY+VTV+KP+T EF+  M+ G+PIL T+T+KC V++     FRI L QGL
Sbjct: 127 ILRARNNHEKEYIVTVNKPVTTEFVEKMANGIPILDTITRKCVVEQIHKNQFRIILTQGL 186

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEV 243
           NRQIRRMCE+  Y V KL+R RIMN+ L+ + +G++RDLT  E+++L  LI +S   +
Sbjct: 187 NRQIRRMCEYLDYRVVKLKRIRIMNIELN-VGVGKYRDLTKKEMVELQNLIADSDKHI 243



>UniRef100_C3A5R0 Pseudouridine synthase n=1 Tax=Bacillus mycoides
           DSM 2048 RepID=C3A5R0_BACMY
          Length = 235

 Score =  259 bits (662), Expect = 2e-67
 Identities = 134/227 (59%), Positives = 167/227 (73%), Gaps = 2/227 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A D
Sbjct: 1   MRINKFISEAGKASRRGADKLINERKVIINGKVAKIGDQVNPGDDVRVNGEQL--RIARD 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+I
Sbjct: 59  HVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRINHIGRLDKDSDGLILLTNDGDIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V+VDKPIT EF+  M+AGV IL T T  C+V + + + F+I L QGLN
Sbjct: 119 LRAENKHEKEYIVSVDKPITPEFLEKMAAGVKILDTKTLPCEVTQLSKYEFQIILTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           RQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDL+  E   LF
Sbjct: 179 RQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLSKKEKKRLF 225



>UniRef100_B7RU12 Pseudouridine synthase n=1 Tax=marine gamma
           proteobacterium HTCC2148 RepID=B7RU12_9GAMM
          Length = 313

 Score =  259 bits (662), Expect = 2e-67
 Identities = 148/293 (50%), Positives = 188/293 (64%), Gaps = 7/293 (2%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLI- 59
           M P++S+RLNK+ISESG CSRREAD+ I    V +NG R  +G +V+ GDVV V+GQ I 
Sbjct: 1   MDPNNSIRLNKFISESGHCSRREADKLIASNRVKINGTRPELGTKVESGDVVTVDGQEIM 60

Query: 60  -EPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTN 118
                  D V IA NKPVGI  TTE   + NIVD ++H +R+FPIGRLDK S+GLI LT+
Sbjct: 61  GSAPGKSDRVYIAYNKPVGITCTTERSVQGNIVDAIDHHQRIFPIGRLDKPSEGLILLTS 120

Query: 119 HGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFR 178
            GD+VNKILRA N HEKEYLVTV+K I + F   M+ G+PIL TVTK CKV      VF+
Sbjct: 121 DGDIVNKILRAENAHEKEYLVTVNKSIGKGFSEKMAGGIPILNTVTKPCKVSVVRRNVFK 180

Query: 179 ITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIEN 238
           I L +GLNRQIRRMCE   YEV +L R RIMNV L  + +G+WR+LT+ E+  L   I  
Sbjct: 181 IILTEGLNRQIRRMCEFLDYEVTQLVRLRIMNVHLGKLKVGQWRNLTEQEMAQLNIAISG 240

Query: 239 SSSEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPA--SNGKRFTSPGRKKKG 289
           S+    P  K+    A  ++P  +++ T     +PA  S   R +S   K  G
Sbjct: 241 STG--SPPKKSSQSAAKKRKPQHRLKGTG-SDAKPARKSTKSRHSSSKNKDSG 290



>UniRef100_A9VF36 Pseudouridine synthase n=1 Tax=Bacillus
           weihenstephanensis KBAB4 RepID=A9VF36_BACWK
          Length = 235

 Score =  259 bits (661), Expect = 3e-67
 Identities = 134/227 (59%), Positives = 166/227 (73%), Gaps = 2/227 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A D
Sbjct: 1   MRINKFISEAGKASRRGADKLINERKVIINGKVAKIGDQVNPGDDVRVNGEQL--RIARD 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+I
Sbjct: 59  HVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRINHIGRLDKDSDGLILLTNDGDIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V+VDKPIT EF+  M+AGV IL T T  C+V + + + F I L QGLN
Sbjct: 119 LRAENKHEKEYIVSVDKPITPEFLEKMAAGVKILDTKTLPCEVTQLSKYEFEIILTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           RQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDL+  E   LF
Sbjct: 179 RQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLSKKEKKRLF 225



>UniRef100_C0EY35 Putative uncharacterized protein n=1
           Tax=Eubacterium hallii DSM 3353 RepID=C0EY35_9FIRM
          Length = 273

 Score =  259 bits (661), Expect = 3e-67
 Identities = 120/229 (52%), Positives = 176/229 (76%), Gaps = 2/229 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +RLNK++S++G+CSRR+ADRY+EQG + ++G+ A +G +V  G  ++V+G+ +     + 
Sbjct: 36  MRLNKFLSDAGVCSRRQADRYVEQGRILVDGEPAQMGQKVHAGQDIRVDGKRVSVSRKQ- 94

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            +++A+NKP GIV TTE  E+DNIVDF+ + +R++P+GRLDKDS+GLI +TN G+L+N+I
Sbjct: 95  -IVLAVNKPKGIVCTTEKREKDNIVDFIGYPERIYPVGRLDKDSEGLILMTNDGELMNEI 153

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L+A N HEKEY VT+++P+T  F++ MS GV IL TVT+ CKVK+   + FRI L QGLN
Sbjct: 154 LKARNYHEKEYEVTINRPVTNVFLKQMSEGVEILDTVTRPCKVKRTGVYTFRIILTQGLN 213

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKL 235
           RQIRRMCE  GY V++L+R RIMN+ L  +P G++R++T +EL  L KL
Sbjct: 214 RQIRRMCEACGYRVRELKRLRIMNIHLGSLPTGKYREITGEELSKLEKL 262



>UniRef100_B0QEF3 Pseudouridine synthase n=1 Tax=Bacillus anthracis
           str. A0442 RepID=B0QEF3_BACAN
          Length = 238

 Score =  258 bits (658), Expect = 6e-67
 Identities = 133/228 (58%), Positives = 168/228 (73%), Gaps = 2/228 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A 
Sbjct: 3   NLRINKFISEAGKASRRGADKLINERRVIINGKVAKIGDQVNPGDDVRVNGEQL--RIAR 60

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+
Sbjct: 61  DHVYIALNKPVGITCTSEKSVKGNIIDLVNHPLRISHIGRLDKDSDGLILLTNDGDIVNE 120

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N HEKEY+V+VDKPIT +F+  M+AGV ILGT T  C++ + + + F+I L QGL
Sbjct: 121 ILRAENKHEKEYIVSVDKPITPDFLEKMAAGVKILGTKTLPCEITQLSKYEFKIILTQGL 180

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           NRQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+ RDLT  E   LF
Sbjct: 181 NRQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQRRDLTKKEKRRLF 228



>UniRef100_C2XTW5 Pseudouridine synthase n=1 Tax=Bacillus cereus
           AH603 RepID=C2XTW5_BACCE
          Length = 227

 Score =  257 bits (657), Expect = 8e-67
 Identities = 131/222 (59%), Positives = 164/222 (73%), Gaps = 2/222 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK+ISE+G  SRR AD+ I +  V +NGK A IGDQV PGD V+VNG+ +  R A D
Sbjct: 1   MRINKFISEAGKASRRGADKLINERKVIINGKVAKIGDQVNPGDDVRVNGEQL--RIARD 58

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  T+E   + NI+D VNH  R+  IGRLDKDS GLI LTN GD+VN+I
Sbjct: 59  HVYIALNKPVGITCTSEKAVKGNIIDLVNHPLRINHIGRLDKDSDGLILLTNDGDIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LRA N HEKEY+V+VDKPIT EF+  M+AGV IL T T  C++ + + + F I L QGLN
Sbjct: 119 LRAENKHEKEYIVSVDKPITPEFLEKMAAGVKILDTKTLPCEITQLSKYEFEIILTQGLN 178

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDE 228
           RQIRRMCE  GY+V  L+RTRIMN+ L+ +P+G+WRDL+  E
Sbjct: 179 RQIRRMCEALGYQVYTLKRTRIMNIELNNLPVGQWRDLSKKE 220



>UniRef100_Q21MN5 Pseudouridine synthase n=1 Tax=Saccharophagus
           degradans 2-40 RepID=Q21MN5_SACD2
          Length = 324

 Score =  256 bits (655), Expect = 1e-66
 Identities = 146/300 (48%), Positives = 187/300 (62%), Gaps = 18/300 (6%)

Query: 4   DSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPRE 63
           DS+VRLNK+IS+SG CSRREAD+ I    V +NG    +G  V+ GDVV V+ Q +    
Sbjct: 4   DSAVRLNKFISDSGHCSRREADKLIASDRVKINGLLPELGAVVESGDVVTVDDQPLRASA 63

Query: 64  AE--DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGD 121
           A+  D + IA NKP GI  TT+   + NIVD ++H +R+FPIGRLDK S+GLI LT+ GD
Sbjct: 64  ADKTDRIYIAYNKPFGITCTTDQTVKGNIVDAIDHDERIFPIGRLDKPSEGLILLTSDGD 123

Query: 122 LVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITL 181
           +VNKILRA N H+KEY+VTV+K +   F   MS G+PILGT+TK CKV+      F+I L
Sbjct: 124 IVNKILRAENAHDKEYIVTVNKNLAPNFAEKMSRGLPILGTITKPCKVRVIGKTTFKIIL 183

Query: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS 241
            QGLNRQIRRMC++ GY+VK+L RTRIMN+ L  +  G+WR LT  EL  L K    SS 
Sbjct: 184 TQGLNRQIRRMCDYLGYDVKQLVRTRIMNIELGKLKPGQWRRLTKVELDLLTKATSQSSK 243

Query: 242 EVKPKAKAKPKTA------GIKRPVVKME-KTAEKGGRP---------ASNGKRFTSPGR 285
                A AK   +       + +P VK E K  +K GRP          +  K  T+ GR
Sbjct: 244 TAIKGANAKSSASPTATKPRVAKPKVKKEPKDLDKHGRPKNKSTGVKRGAKSKNLTTGGR 303



>UniRef100_B4RXU3 Pseudouridine synthase n=1 Tax=Alteromonas
           macleodii 'Deep ecotype' RepID=B4RXU3_ALTMD
          Length = 248

 Score =  256 bits (655), Expect = 1e-66
 Identities = 128/235 (54%), Positives = 167/235 (71%), Gaps = 2/235 (0%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEP--REAE 65
           RLNKYIS++G+CSRREAD+ IEQ  V +N     +G ++ P D+VKV+G+++    ++  
Sbjct: 8   RLNKYISDTGLCSRREADKLIEQKRVSVNNHPPELGTKIGPNDIVKVDGKIVGAVAKDKS 67

Query: 66  DLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
           D V I  NKP+GI  TTE   + NI+D + H  R+FP+GRLDK S+GLI LT+ GD+VNK
Sbjct: 68  DRVYIVYNKPIGITCTTERHVKGNIIDAIGHKARIFPVGRLDKPSEGLIILTSDGDIVNK 127

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           ILRA N H+KEY VTV++PI+E F++ M+ GVPILGTVTK C VK      F I L QGL
Sbjct: 128 ILRAENAHDKEYEVTVNQPISERFVKRMARGVPILGTVTKPCVVKPTGKNTFTIILTQGL 187

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           NRQIRRMCE  GYEV KL+RTRIM++ L  +  G+WR+LT  EL  L   ++ SS
Sbjct: 188 NRQIRRMCEFLGYEVTKLKRTRIMHLELKALKPGQWRNLTQHELTTLQNAVKASS 242



>UniRef100_Q1PKX3 Pseudouridine synthase n=1 Tax=uncultured
           Prochlorococcus marinus clone ASNC3046
           RepID=Q1PKX3_PROMA
          Length = 240

 Score =  256 bits (655), Expect = 1e-66
 Identities = 131/236 (55%), Positives = 175/236 (74%), Gaps = 2/236 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + R+NKY+SE G CSRREAD+ I +G V +NGK   IG +V+  D V+V GQ IE  + +
Sbjct: 2   ATRINKYLSEVGYCSRREADKLILEGKVTINGKIPEIGAKVEEIDQVEVKGQRIEKSDRQ 61

Query: 66  DLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
           + + +A NKP+GIV TT+   E +N++DF+ + KR+FPIGRLDK S+GLIFLTN GD+VN
Sbjct: 62  EKIYLAFNKPLGIVCTTDRKVEPNNVIDFIKYPKRIFPIGRLDKLSEGLIFLTNDGDIVN 121

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRA N+HEKEY+V V++PI  EFI+ MS GV IL T+TK C VK+  P  F+I L QG
Sbjct: 122 KILRARNNHEKEYIVKVNRPINSEFIQKMSNGVEILDTITKNCSVKQLGPRKFKIILTQG 181

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LNRQIRRMCE  GY V+ L+R RIMN+ L  +P G++R+ + +EL +L  L++NSS
Sbjct: 182 LNRQIRRMCETLGYRVRSLKRVRIMNIKLD-MPSGKYREFSREELQELNGLLQNSS 236



>UniRef100_A8G5N8 Pseudouridine synthase n=1 Tax=Prochlorococcus
           marinus str. MIT 9215 RepID=A8G5N8_PROM2
          Length = 240

 Score =  255 bits (652), Expect = 3e-66
 Identities = 129/236 (54%), Positives = 173/236 (73%), Gaps = 2/236 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + R+NKY+SE G CSRREADR I +G V +NGK   IG +V+  D V+V GQ I+    +
Sbjct: 2   ATRINKYLSEVGYCSRREADRLIHEGKVTINGKIPKIGSKVEESDQVEVKGQRIKKITGQ 61

Query: 66  DLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
             + +A NKPVGIV TT+   E +N++DF+ + KR+FPIGRLDK S+GLIFLTN GD+VN
Sbjct: 62  KNIYLAFNKPVGIVCTTDRKVEPNNVIDFIKYPKRIFPIGRLDKLSEGLIFLTNDGDIVN 121

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRA N+HEKEY+V V++ I  +FI+ MS+GV IL T+TK C VK+  P  F+I L QG
Sbjct: 122 KILRARNNHEKEYIVKVNRQINSDFIQSMSSGVEILDTITKNCFVKQLGPKKFKIILTQG 181

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LNRQIRRMCE  GY V+ L+R RIMN+ L  +  G++R+ T +EL++L +L++ SS
Sbjct: 182 LNRQIRRMCESLGYRVRSLKRVRIMNIELD-VSTGKYREFTKEELLELNRLLKKSS 236



>UniRef100_B9P2N9 Pseudouridine synthase n=1 Tax=Prochlorococcus
           marinus str. MIT 9202 RepID=B9P2N9_PROMA
          Length = 240

 Score =  254 bits (650), Expect = 5e-66
 Identities = 129/236 (54%), Positives = 172/236 (72%), Gaps = 2/236 (0%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + R+NKY+SE G CSRREADR I +G V +NGK   IG +V+  D V+V GQ I+    +
Sbjct: 2   ATRINKYLSEVGYCSRREADRLIHEGKVTINGKIPKIGSKVEESDQVEVKGQRIKKITGQ 61

Query: 66  DLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
             + +A NKPVGIV TT+   E +N++DF+ + KR+FPIGRLDK S+GLIFLTN GD+VN
Sbjct: 62  KNIYLAFNKPVGIVCTTDRKVEPNNVIDFIKYPKRIFPIGRLDKLSEGLIFLTNDGDIVN 121

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
           KILRA N+HEKEY+V V++ I  +FI+ MS+GV IL T+TK C VK+  P  F+I L QG
Sbjct: 122 KILRARNNHEKEYIVKVNRQINSDFIQSMSSGVEILDTITKNCFVKQLGPKKFKIILTQG 181

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS 240
           LNRQIRRMCE  GY V+ L+R RIMN+ L  +  G++R+ T +EL +L +L++ SS
Sbjct: 182 LNRQIRRMCESLGYRVRSLKRVRIMNIELD-VSTGKYREFTKEELFELNRLLKKSS 236



>UniRef100_B9EAA4 Pseudouridine synthase n=1 Tax=Macrococcus
           caseolyticus JCSC5402 RepID=B9EAA4_9STAP
          Length = 236

 Score =  254 bits (650), Expect = 5e-66
 Identities = 127/231 (54%), Positives = 170/231 (73%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NK++SE+GICSRR AD++IE G + +NG +A +G +V  GD V+V+ +++     + 
Sbjct: 1   MRINKFLSEAGICSRRGADKWIEAGRIKINGVKAELGSKVTEGDSVEVDNKVVTLNTDKG 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V I LNKP GI STTE   + NIVDFV HS+R+F IGRLDKDS+GLI LTN GD+VN+I
Sbjct: 61  YVYIKLNKPRGITSTTERHIKGNIVDFVGHSERIFHIGRLDKDSEGLILLTNDGDIVNEI 120

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           LR    HEKEY+VTVDKPIT++F++ MS GV IL TVT   +V+K     F+I L QGLN
Sbjct: 121 LRKEGRHEKEYIVTVDKPITDDFVKQMSEGVAILDTVTLPAEVEKLNTKTFKIILTQGLN 180

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE 237
           RQIRRM E  GYEVK+L R R+MN+ +  + LGEW+DLT+ E  +LF +++
Sbjct: 181 RQIRRMTEALGYEVKQLRRIRVMNILVDDLKLGEWKDLTEAEKDELFSMLK 231



>UniRef100_A6TX48 Pseudouridine synthase n=1 Tax=Alkaliphilus
           metalliredigens QYMF RepID=A6TX48_ALKMQ
          Length = 235

 Score =  253 bits (645), Expect = 2e-65
 Identities = 130/232 (56%), Positives = 168/232 (72%), Gaps = 8/232 (3%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +RLN +IS +G CSRREAD  I+Q  V +NGK AT+G +V PGD V + G+ ++ +  + 
Sbjct: 1   MRLNNFISSTGKCSRREADELIKQKKVTVNGKIATLGCKVDPGDQVMLKGKPLQAKNND- 59

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IALNKPVGI  TTE   R NI+DF+NH +R+FPIGRLDKDS+GLI LTN G +VN+I
Sbjct: 60  -VYIALNKPVGITCTTERHIRGNIIDFINHPERIFPIGRLDKDSEGLILLTNDGSIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILG------TVTKKCKVKKEAPFVFRIT 180
           L   N HEK+Y+VTV+K IT  FI GMS GV I        T+TK+CK+ +     F+IT
Sbjct: 119 LAEENKHEKDYIVTVNKKITPSFIEGMSKGVKIYNPVKNKDTMTKRCKLVRINDRTFKIT 178

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDL 232
           L QGLNRQIRRMC HFGY V KL+R RIMN++L  + +G+WR+LT++E+ DL
Sbjct: 179 LCQGLNRQIRRMCTHFGYRVVKLKRVRIMNLTLKDLTIGKWRNLTEEEVKDL 230



>UniRef100_Q899L7 Pseudouridine synthase n=1 Tax=Clostridium tetani
           RepID=Q899L7_CLOTE
          Length = 235

 Score =  252 bits (644), Expect = 2e-65
 Identities = 128/229 (55%), Positives = 170/229 (74%), Gaps = 8/229 (3%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +RLN +IS +GICSRREAD  I+Q  V +NG+ A +G  V   D ++VNG+L++ ++ + 
Sbjct: 1   MRLNNFISSTGICSRREADELIKQKKVKVNGEIAPLGYIVNSKDKIEVNGKLLQKKKND- 59

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            + IALNKPVGI  TTE   + NI+DF+NH++R+FPIGRLDKDS+GLI LTN G +VN+I
Sbjct: 60  -IYIALNKPVGITCTTERHIKGNIIDFINHTERIFPIGRLDKDSEGLILLTNDGSIVNEI 118

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILG------TVTKKCKVKKEAPFVFRIT 180
           LR  N+HEK+Y+VTV+KPIT  FI GMS GV I        T+T KCKV K     F+IT
Sbjct: 119 LREENNHEKDYIVTVNKPITPAFINGMSKGVKIYNPVKNQYTITNKCKVVKINSNTFKIT 178

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           L QGLNRQIRRMC  F Y+V KL+R RI+N++L G+ +G+WR+LTD+E+
Sbjct: 179 LSQGLNRQIRRMCSSFSYKVVKLKRIRIINITLKGLNVGKWRNLTDEEV 227



>UniRef100_Q26FB4 Pseudouridine synthase n=1 Tax=Flavobacteria
           bacterium BBFL7 RepID=Q26FB4_9BACT
          Length = 253

 Score =  251 bits (642), Expect = 4e-65
 Identities = 132/241 (54%), Positives = 173/241 (71%), Gaps = 3/241 (1%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M  +  +R+NKY+SE G CSRR ADR IEQ  V +NG    +G +V+P D V V+G+ I 
Sbjct: 1   MSENKGIRINKYLSEQGFCSRRAADRLIEQQRVTINGTVPEMGTKVQPNDNVAVDGEPIS 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNH 119
            ++ E  V IA +KP GIV TT+   E DNI++++N+  R+FPIGRLDK S+GLIFLTN 
Sbjct: 61  KKK-EKPVYIAFHKPTGIVCTTDTRVEPDNIIEYINYPTRIFPIGRLDKMSEGLIFLTND 119

Query: 120 GDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRI 179
           GD+VNKILR+ N+H KEY+VTVD  I + FI  M++G+PIL TVTKKC+V++     FRI
Sbjct: 120 GDIVNKILRSRNNHGKEYIVTVDHSIDDRFISRMASGIPILDTVTKKCEVEQIGRKTFRI 179

Query: 180 TLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
            L QGLNRQIRRMCE+  Y V KL+R RIMNV L  IP G +RDLT +EL ++++L   S
Sbjct: 180 VLTQGLNRQIRRMCEYLNYRVTKLKRIRIMNVELD-IPKGTYRDLTKEELDEIYRLTAES 238

Query: 240 S 240
           +
Sbjct: 239 T 239



>UniRef100_B0P079 Pseudouridine synthase n=1 Tax=Clostridium sp.
           SS2/1 RepID=B0P079_9CLOT
          Length = 249

 Score =  251 bits (642), Expect = 4e-65
 Identities = 125/237 (52%), Positives = 172/237 (72%), Gaps = 4/237 (1%)

Query: 4   DSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPRE 63
           + +VR+NKY+S++GICSRR+AD Y+E+G V ++G+ A  G +V PG  V  +G+ ++ +E
Sbjct: 14  EDAVRINKYLSQAGICSRRQADTYVEEGRVEVDGEVAVSGTKVLPGQSVTFDGKPVKIQE 73

Query: 64  AEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLV 123
             DL+ +A +KP GIV T    E+DNI+D++N+  R++P+GRLDKDSQGLI LTN G+  
Sbjct: 74  --DLIFLAFHKPRGIVCTASKEEKDNIIDYINYPTRIYPVGRLDKDSQGLILLTNDGEAA 131

Query: 124 NKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPI--LGTVTKKCKVKKEAPFVFRITL 181
           N+I++A N HEKEY VTV+K IT EFI  M   VP+  +  VT++CKV KE P  FRI L
Sbjct: 132 NQIMKARNYHEKEYEVTVNKRITNEFIHDMRNPVPLDEINAVTRRCKVIKEGPNEFRIIL 191

Query: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIEN 238
            QGLNRQIRRMCEHFGY V KL+R R+MN+ L  +  G +R LT DEL +L K +++
Sbjct: 192 TQGLNRQIRRMCEHFGYRVTKLKRVRVMNIKLGDLKEGRYRKLTPDELRELKKELKS 248



>UniRef100_B7BZ57 Pseudouridine synthase (Fragment) n=1
           Tax=Roseburia intestinalis L1-82 RepID=B7BZ57_9FIRM
          Length = 239

 Score =  251 bits (641), Expect = 6e-65
 Identities = 119/229 (51%), Positives = 174/229 (75%), Gaps = 4/229 (1%)

Query: 15  ESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDLVLIALNK 74
           E+G+CSRREADR +E GNV ++G  A++G +V P   V   G+ +  ++ E+++L+A +K
Sbjct: 1   EAGVCSRREADRQVEAGNVTIDGVVASMGAKVLPDQTVLFCGKPV--KKEEEMILLAFHK 58

Query: 75  PVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHE 134
           P GIV T E  E++N+VD++N+ KR++PIGRLDKDS+GL+ +TN+GD+VN+I+RAGN HE
Sbjct: 59  PTGIVCTAEKREKNNVVDYINYPKRIYPIGRLDKDSEGLLLMTNNGDIVNRIMRAGNMHE 118

Query: 135 KEYLVTVDKPITEEFIRGMSAGVPI--LGTVTKKCKVKKEAPFVFRITLVQGLNRQIRRM 192
           KEY+VTV+KP+T+ F+RG++ GVP+  L   T+KCKV +     F I L QGLNRQIRRM
Sbjct: 119 KEYIVTVNKPVTDSFLRGLAGGVPLVELNATTRKCKVWRIGKRQFGIILTQGLNRQIRRM 178

Query: 193 CEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS 241
           CE+FGY V+KL RTRIMN+ L  +  G +R++T  E  +L +L+++SS+
Sbjct: 179 CEYFGYRVEKLVRTRIMNIELGDLKAGTYREVTPQEYKELMRLVKDSSN 227



>UniRef100_C0FD09 Putative uncharacterized protein n=1
           Tax=Clostridium sp. M62/1 RepID=C0FD09_9CLOT
          Length = 283

 Score =  249 bits (637), Expect = 2e-64
 Identities = 134/267 (50%), Positives = 182/267 (68%), Gaps = 9/267 (3%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +RLNK++SESG CSRREADR IE G V ++G  A++G +++ G  ++ +G LI  ++   
Sbjct: 25  IRLNKFLSESGFCSRREADRLIEAGEVLVDGAVASMGMKIREGQQIEADGTLISGKDRP- 83

Query: 67  LVLIALNKPVGIVSTTEDGER-DNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNK 125
            V++ +NKP GIV TT D +R +NIVDF+ +  RV+P+GRLDKDS+GLI +TN G+LVN+
Sbjct: 84  -VVLLVNKPRGIVCTTSDRDRAENIVDFIGYPLRVYPVGRLDKDSEGLILMTNQGELVNR 142

Query: 126 ILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGL 185
           IL+    HEKEYLV+VD+ ITE+F+  M  GV IL TVT+ C V+K     FRI L QGL
Sbjct: 143 ILKGRYGHEKEYLVSVDREITEQFLNRMRKGVKILDTVTRPCTVEKTGEKSFRIILTQGL 202

Query: 186 NRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKP 245
           NRQIRRMCE  GY V+ L+R RIMN+ L G+  GE+R++T  E  +L +L+E        
Sbjct: 203 NRQIRRMCEALGYRVRTLKRVRIMNLRLDGLKTGEYREITRGEWKELTELLEGKGE---- 258

Query: 246 KAKAKPKTAGIKRPVVKMEKTAEKGGR 272
           + KA  K AG    + + E   EKGGR
Sbjct: 259 RRKADQKNAGKHSELGQRE--PEKGGR 283



>UniRef100_A3XJS4 Pseudouridine synthase n=1 Tax=Leeuwenhoekiella
           blandensis MED217 RepID=A3XJS4_9FLAO
          Length = 265

 Score =  248 bits (634), Expect = 4e-64
 Identities = 126/253 (49%), Positives = 181/253 (71%), Gaps = 3/253 (1%)

Query: 1   MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE 60
           M  +   R+NK++SE G CSRREAD+ I+ G + +NG    +G +V   D ++V+G+++ 
Sbjct: 1   MSENKLTRINKFLSEVGYCSRREADKLIDAGRITVNGNIPEMGTKVSSEDEIRVDGKIVG 60

Query: 61  PREAEDLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNH 119
            ++   + LI  +KPVGIV TT+   E+DNI+D++N+  R+FPIGRLDK S+GLIFLTN 
Sbjct: 61  EQKDPPVYLI-FHKPVGIVCTTDTRVEKDNIIDYINYPTRIFPIGRLDKASEGLIFLTND 119

Query: 120 GDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRI 179
           GD+VNKILRA N+H+KEY+V VDKPI   F++ MS G+PIL T+T+KC+V++     F+I
Sbjct: 120 GDIVNKILRARNNHDKEYIVDVDKPIDASFVKRMSDGIPILDTITRKCEVEQLGKKRFKI 179

Query: 180 TLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
            L QGLNRQIRRMCE+  Y V +L+R RIMN++L  IP+G++R  T  EL +L  L+E S
Sbjct: 180 ILTQGLNRQIRRMCEYLDYNVTRLKRVRIMNINLD-IPVGKYRAFTTAELKELNSLLEGS 238

Query: 240 SSEVKPKAKAKPK 252
           S   +P+++   K
Sbjct: 239 SKTFEPESQTGNK 251



>UniRef100_A8RIE7 Pseudouridine synthase n=1 Tax=Clostridium bolteae
           ATCC BAA-613 RepID=A8RIE7_9CLOT
          Length = 251

 Score =  247 bits (630), Expect = 1e-63
 Identities = 125/239 (52%), Positives = 173/239 (72%), Gaps = 5/239 (2%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           RLNK++S+ G+CSRREADR IE G V ++ + A++G +V PG  V  NG+++    ++  
Sbjct: 4   RLNKWLSQMGVCSRREADRLIEAGKVLVDNRPASMGQKVTPGQKVVCNGKMVRVDRSQRP 63

Query: 68  --VLIALNKPVGIVSTTEDGER-DNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
             VL+A+NKP GIV TT D +R +NIVDF+ + +R++P+GRLDKDS+GL+ +TN GDLVN
Sbjct: 64  RPVLLAVNKPKGIVCTTTDKDRAENIVDFLGYPERIYPVGRLDKDSEGLLLMTNQGDLVN 123

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGV--PILGTVTKKCKVKKEAPFVFRITLV 182
           KI+R+GN HEKEY+VT+DKP+TE F+  M+ G+  P L  VT+ CKVKK     F I L 
Sbjct: 124 KIMRSGNAHEKEYIVTIDKPVTERFLEQMAGGIRLPELDQVTRPCKVKKVERNTFSIILT 183

Query: 183 QGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSS 241
           QGLNRQIRRMCE  G +VK+L R RIMN+ L  +  G +R +T +E  +L  L+++SSS
Sbjct: 184 QGLNRQIRRMCEACGCQVKRLVRVRIMNIRLGNLRTGAYRQITKEEYEELTGLLKDSSS 242



>UniRef100_A7VIL1 Pseudouridine synthase n=1 Tax=Clostridium sp.
           L2-50 RepID=A7VIL1_9CLOT
          Length = 272

 Score =  246 bits (629), Expect = 1e-63
 Identities = 127/269 (47%), Positives = 180/269 (66%), Gaps = 8/269 (2%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +R+NKY+SE+GICSRR AD YI +G + +NGK A +G +++  D V V+G+ +  R+ E+
Sbjct: 5   IRINKYLSEAGICSRRAADEYILKGRITINGKPAEMGQKIEANDRVMVDGKPV--RKREE 62

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V++A NKP+G+  T    + DNI D + +  R+  +GRLDKDSQGL+ LTN GDL N I
Sbjct: 63  TVILAYNKPLGLTCTASHDDPDNIFDHIKYPIRLQYVGRLDKDSQGLLLLTNDGDLSNSI 122

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
            ++ N+HEKEY V V+KPIT+EF+  M+AGVPIL TVTKKC++ K   + F+I + QGLN
Sbjct: 123 QKSVNNHEKEYRVRVNKPITDEFLTQMAAGVPILDTVTKKCRLYKIDNYSFKIIITQGLN 182

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS------ 240
           RQIRRMCE+FGY+V  L+R R++N+ L  +  GE+R LT +E  +L +L+E         
Sbjct: 183 RQIRRMCEYFGYKVVNLKRLRVINIRLGNLRPGEYRHLTKEEETELRRLVERKEEVKTKR 242

Query: 241 SEVKPKAKAKPKTAGIKRPVVKMEKTAEK 269
            E +P  K +    G KR V    +T  K
Sbjct: 243 EEAQPDNKNEQNVVGNKRYVSWKRETGSK 271



>UniRef100_B7AQD5 Pseudouridine synthase n=1 Tax=Bacteroides
           pectinophilus ATCC 43243 RepID=B7AQD5_9BACE
          Length = 238

 Score =  243 bits (621), Expect = 1e-62
 Identities = 122/234 (52%), Positives = 169/234 (72%), Gaps = 5/234 (2%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDL 67
           R+NKY+SE+G CSRREADR +E G V ++G  A  G +V  G  V V+G+ +  R     
Sbjct: 5   RINKYLSEAGYCSRREADRLVEAGRVTIDGVAAVCGSKVADGQKVCVDGKEVSGRSRH-- 62

Query: 68  VLIALNKPVGIVSTTEDGE-RDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
           +L+A NKP GIV TT D +  +NIVDF+ + +R++P+GRLDKDS+GLI +TN G ++++I
Sbjct: 63  ILLAFNKPAGIVCTTTDKQGSNNIVDFIGYPERIYPVGRLDKDSEGLILMTNDGAMMDRI 122

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPI--LGTVTKKCKVKKEAPFVFRITLVQG 184
           LR+ N HEKEY+V V+KP+T+EF++GMS GV +  L   TK C V+K   F FRI L QG
Sbjct: 123 LRSTNGHEKEYIVRVNKPVTDEFVKGMSDGVYLKELDRTTKVCVVEKVTKFCFRIVLTQG 182

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIEN 238
           LNRQIRRMCE+FGY+V KL+R RIMN+ L  +  G +RD+TD+E  +L + ++N
Sbjct: 183 LNRQIRRMCENFGYKVMKLKRIRIMNIMLGDLKQGCYRDVTDEEYAELVRQLDN 236



>UniRef100_B0MAK4 Pseudouridine synthase n=1 Tax=Anaerostipes caccae
           DSM 14662 RepID=B0MAK4_9FIRM
          Length = 242

 Score =  242 bits (618), Expect = 3e-62
 Identities = 124/228 (54%), Positives = 163/228 (71%), Gaps = 4/228 (1%)

Query: 4   DSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPRE 63
           +S+VR+NK++S++G+CSRR+AD Y+EQG V ++GK A  G +V  G  V  NG+ +  R 
Sbjct: 6   NSAVRINKFLSQAGLCSRRQADFYVEQGKVTVDGKTAEPGTKVCEGQEVCFNGKPV--RM 63

Query: 64  AEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLV 123
               V +A NKP GIV T+   E +NI+D V +  R++P+GRLDKDSQGLI LTN G+  
Sbjct: 64  DTQTVYLAYNKPKGIVCTSSKEEANNIIDAVGYPSRIYPVGRLDKDSQGLILLTNDGEAA 123

Query: 124 NKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPI--LGTVTKKCKVKKEAPFVFRITL 181
           N+I++A N HEKEY VTV+K IT +FI+GM  GVP+  L TVT+KC VKKE P  FRI L
Sbjct: 124 NEIMKARNYHEKEYEVTVNKRITNDFIQGMRNGVPLSELDTVTRKCTVKKEGPDSFRIIL 183

Query: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
            QGLNRQIRRMCE+FGY V KL R R+MN+ L  +  G +R LT +E+
Sbjct: 184 TQGLNRQIRRMCEYFGYRVTKLRRVRVMNIRLGNLKEGSYRKLTPEEI 231



>UniRef100_Q1VWK8 Pseudouridine synthase n=1 Tax=Psychroflexus
           torquis ATCC 700755 RepID=Q1VWK8_9FLAO
          Length = 235

 Score =  241 bits (616), Expect = 4e-62
 Identities = 122/229 (53%), Positives = 173/229 (75%), Gaps = 3/229 (1%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           S+R+NKY+S++G CSRREAD+ +EQG V +NG+   +G +V  GD V V+G+L+E +E E
Sbjct: 5   SIRINKYLSQAGFCSRREADKLMEQGRVTINGEYIEMGTKVNSGDKVYVDGKLVE-KETE 63

Query: 66  DLVLIALNKPVGIVSTTEDG-ERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVN 124
           + V +A+ KP G+V TT    E++NIVDFV++  R+FPIGRLDK S+GLI +TN G++VN
Sbjct: 64  EKVYLAVYKPKGVVCTTNSKVEKNNIVDFVDYPTRIFPIGRLDKMSEGLILMTNDGEIVN 123

Query: 125 KILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQG 184
            ILRA + H+KEYLVTV+K IT++FI  M  GVPIL T++++C+V+K     F+I L QG
Sbjct: 124 HILRARHFHDKEYLVTVNKTITDDFIEKMRKGVPILDTMSRRCEVEKLGDRSFKIVLTQG 183

Query: 185 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLF 233
           LNRQIRRMCE   Y V+ L+RTRI N++L  +  G +R+LT++E+ DL+
Sbjct: 184 LNRQIRRMCEALDYRVRTLKRTRIKNITLD-VEKGNYRNLTEEEIKDLY 231



>UniRef100_Q3BRB0 Pseudouridine synthase n=1 Tax=Xanthomonas
           campestris pv. vesicatoria str. 85-10 RepID=Q3BRB0_XANC5
          Length = 253

 Score =  241 bits (615), Expect = 6e-62
 Identities = 127/229 (55%), Positives = 160/229 (69%), Gaps = 5/229 (2%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++RLNKYI+ESG CSRREADR I +  V +NG  A  G  V   D V V+GQ +  REA+
Sbjct: 15  TIRLNKYIAESGFCSRREADRLIGERRVTVNGVPAGTGAVVGAEDTVLVDGQPLRIREAK 74

Query: 66  DL-----VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            L     V IALNKPVGI  TTE   + NIV FV H +R+FPIGRLDKDS+GLI +T++G
Sbjct: 75  KLGGRKHVYIALNKPVGITCTTESSVKGNIVKFVGHEQRIFPIGRLDKDSEGLILMTSNG 134

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           ++VN+ILRA N H+KEYLV V+KP+T+EF+RGM+ GV I    T  C+  + A F FRI 
Sbjct: 135 NIVNEILRAENRHQKEYLVAVNKPVTDEFLRGMARGVRIHNETTLPCRTARIAKFGFRIV 194

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           L QGLNRQIR M   FGY V +L R RI N+ L+ +  G+WR+L+D EL
Sbjct: 195 LEQGLNRQIRLMAAEFGYRVTQLRRVRIDNIKLAALKPGQWRNLSDAEL 243



>UniRef100_Q8PIT4 Pseudouridine synthase n=1 Tax=Xanthomonas
           axonopodis pv. citri RepID=Q8PIT4_XANAC
          Length = 240

 Score =  238 bits (608), Expect = 4e-61
 Identities = 125/229 (54%), Positives = 160/229 (69%), Gaps = 5/229 (2%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           ++RLNKYI+E+G CSRREADR I +  V +NG  A  G  V   D V V+ Q +  REA+
Sbjct: 2   TIRLNKYIAETGFCSRREADRLIGERRVTVNGVPAGTGAVVGEEDTVLVDDQPLRIREAK 61

Query: 66  DL-----VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            L     V IALNKPVGI  TTE   + NIV+FV H +R+FPIGRLDKDS+GLI +T++G
Sbjct: 62  KLGGRKHVYIALNKPVGITCTTESSVKGNIVEFVGHEQRIFPIGRLDKDSEGLILMTSNG 121

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           ++VN+ILRA N H+KEYLV V+KP+T+EF+RGM+ GV I    T  C+  + A F FRI 
Sbjct: 122 NIVNEILRAENRHQKEYLVAVNKPVTDEFLRGMARGVRIHNETTLPCRTARIAKFGFRIV 181

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           L QGLNRQIR M   FGY V +L R RI N+ L+ +  G+WR+L+D EL
Sbjct: 182 LEQGLNRQIRLMAAEFGYRVTQLRRVRIDNIKLAALKPGQWRNLSDAEL 230



>UniRef100_B0RQY6 Pseudouridine synthase n=1 Tax=Xanthomonas
           campestris pv. campestris str. B100 RepID=B0RQY6_XANCB
          Length = 260

 Score =  238 bits (608), Expect = 4e-61
 Identities = 125/232 (53%), Positives = 161/232 (69%), Gaps = 5/232 (2%)

Query: 3   PDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPR 62
           P  + RLNK+I+E+G CSRREADR I +  V +NG  A  G  V   D V V+GQ +  R
Sbjct: 19  PPMTTRLNKHIAETGFCSRREADRLIGERRVTVNGVIAGTGAVVGEDDTVLVDGQPLRVR 78

Query: 63  EAEDL-----VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLT 117
           EA+       V IALNKPVGI STTE   + NIV+FV H +R+FPIGRLDKDS+GLI +T
Sbjct: 79  EAKKPGTRRHVYIALNKPVGITSTTESSVKGNIVEFVGHEQRIFPIGRLDKDSEGLILMT 138

Query: 118 NHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVF 177
           ++G++VN+ILRA N H+KEYLV V+KP+T+EF+RGM+ GV +    T  C+  + A F F
Sbjct: 139 SNGNIVNEILRAENRHQKEYLVAVNKPVTDEFLRGMARGVRLHDETTLPCRTARIAKFGF 198

Query: 178 RITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RI L QGLNRQIR M   FG+ V +L R RI N+ L+ +  G+WR+LTD EL
Sbjct: 199 RIVLEQGLNRQIRLMAAAFGFRVTQLRRVRIDNIKLAALKPGQWRNLTDQEL 250



>UniRef100_UPI0001692AEE pseudouridylate synthase n=1
           Tax=Xanthomonas oryzae pv. oryzicola BLS256
           RepID=UPI0001692AEE
          Length = 240

 Score =  238 bits (607), Expect = 5e-61
 Identities = 124/229 (54%), Positives = 160/229 (69%), Gaps = 5/229 (2%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + RLNKYI+E+G CSRR+ADR I +  V +NG  A  G  V   D V V+GQ +  REA+
Sbjct: 2   TTRLNKYIAETGFCSRRQADRLIGERRVTVNGVSAGTGAVVGEEDTVLVDGQPLRVREAK 61

Query: 66  DL-----VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            L     V IALNKPVGI  TTE   + NIV+FV H +R+FPIGRLDK+S+GLI +T++G
Sbjct: 62  KLGGRRHVYIALNKPVGITCTTESSVKGNIVEFVGHEQRIFPIGRLDKESEGLILMTSNG 121

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           ++VN+ILRA N H+KEYLV V+KP+T+EF+RGM+ GV I    T  C+  + A F FRI 
Sbjct: 122 NIVNEILRAENRHQKEYLVAVNKPVTDEFLRGMARGVRIHNETTLPCRTARIAKFGFRIV 181

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           L QGLNRQIR M   FGY V +L R RI N+ L+ +  G+WR+L+D EL
Sbjct: 182 LEQGLNRQIRLMAAEFGYRVTQLRRVRIDNIKLAALKPGQWRNLSDAEL 230



>UniRef100_B9G0G0 Putative uncharacterized protein n=1 Tax=Oryza
            sativa Japonica Group RepID=B9G0G0_ORYSJ
          Length = 1502

 Score =  238 bits (606), Expect = 6e-61
 Identities = 126/236 (53%), Positives = 161/236 (68%), Gaps = 8/236 (3%)

Query: 2    LPDS---SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQL 58
            +PD+   + RLNK+I+++G CSRREADR I    V +NG  A  G  V   D V V+GQ 
Sbjct: 1257 MPDNRAMTTRLNKHIADTGFCSRREADRLIAARRVTVNGHPAGTGAVVGEEDQVLVDGQP 1316

Query: 59   IEPREAEDL-----VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGL 113
            +  R A        V IALNKPVG+  TTE   + NIVDFV H +R+FPIGRLDKDS+GL
Sbjct: 1317 LRARVARKPGARRHVYIALNKPVGVTCTTETSVKGNIVDFVGHEQRIFPIGRLDKDSEGL 1376

Query: 114  IFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEA 173
            I +T++GD+VN+ILRA N H+KEYLV V+KP+T+EF+RGM+ GV I   +T  CK  + A
Sbjct: 1377 ILMTSNGDIVNQILRAENGHQKEYLVAVNKPVTDEFLRGMARGVRIHDQMTLPCKTSRIA 1436

Query: 174  PFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
             F FRITL QGLNRQIR M   FGY V +L R RI N+ +  +  G+WR+LT+ EL
Sbjct: 1437 KFGFRITLQQGLNRQIRLMAAEFGYRVTQLRRVRIDNIKIGALKPGQWRNLTEQEL 1492



>UniRef100_Q2P5I2 Pseudouridine synthase n=1 Tax=Xanthomonas oryzae
           pv. oryzae MAFF 311018 RepID=Q2P5I2_XANOM
          Length = 240

 Score =  237 bits (605), Expect = 8e-61
 Identities = 124/229 (54%), Positives = 160/229 (69%), Gaps = 5/229 (2%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + RLNKYI+E+G CSRR+ADR I +  V +NG  A  G  V   D V V+GQ +  REA+
Sbjct: 2   TTRLNKYIAETGFCSRRQADRLIGERRVTVNGVPAGTGAVVGEEDTVLVDGQPLRVREAK 61

Query: 66  DL-----VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            L     V IALNKPVGI  TTE   + NIV+FV H +R+FPIGRLDK+S+GLI +T++G
Sbjct: 62  KLGGRKHVYIALNKPVGITCTTESSVKGNIVEFVGHEQRIFPIGRLDKESEGLILMTSNG 121

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           ++VN+ILRA N H+KEYLV V+KP+T+EF+RGM+ GV I    T  C+  + A F FRI 
Sbjct: 122 NIVNEILRAENRHKKEYLVAVNKPVTDEFLRGMARGVRIHNETTLPCRTARIAKFGFRIV 181

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           L QGLNRQIR M   FGY V +L R RI N+ L+ +  G+WR+L+D EL
Sbjct: 182 LEQGLNRQIRLMAAEFGYRVTQLRRVRIDNIKLAALKPGQWRNLSDAEL 230



>UniRef100_Q4UWM8 Pseudouridine synthase n=2 Tax=Xanthomonas
           campestris pv. campestris RepID=Q4UWM8_XANC8
          Length = 240

 Score =  236 bits (603), Expect = 1e-60
 Identities = 124/229 (54%), Positives = 160/229 (69%), Gaps = 5/229 (2%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + RLNK+I+E+G CSRREADR I +  V +NG  A  G  V   D V V+GQ +  REA+
Sbjct: 2   TTRLNKHIAETGFCSRREADRLIGERRVTVNGVIAGTGAVVGEDDTVLVDGQPLRVREAK 61

Query: 66  DL-----VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
                  V IALNKPVGI STTE   + NIV+FV H +R+FPIGRLDKDS+GLI +T++G
Sbjct: 62  KPGTRRHVYIALNKPVGITSTTESSVKGNIVEFVGHEQRIFPIGRLDKDSEGLILMTSNG 121

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           ++VN+ILRA N H+KEYLV V+KP+T+EF+RGM+ GV +    T  C+  + A F FRI 
Sbjct: 122 NIVNEILRAENRHQKEYLVAVNKPVTDEFLRGMARGVRLHDETTLPCRTARIAKFGFRIV 181

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           L QGLNRQIR M   FG+ V +L R RI N+ L+ +  G+WR+LTD EL
Sbjct: 182 LEQGLNRQIRLMAAAFGFRVTQLRRVRIDNIKLAALKPGQWRNLTDQEL 230



>UniRef100_B2SSI3 Pseudouridine synthase n=2 Tax=Xanthomonas oryzae
           pv. oryzae RepID=B2SSI3_XANOP
          Length = 240

 Score =  236 bits (602), Expect = 2e-60
 Identities = 124/229 (54%), Positives = 159/229 (69%), Gaps = 5/229 (2%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + RLNKYI+E+G CSRR+ADR I +  V +NG  A  G  V   D V V+GQ +  REA+
Sbjct: 2   TTRLNKYIAETGFCSRRQADRLIGERRVTVNGVPAGTGAVVGEEDTVLVDGQPLRVREAK 61

Query: 66  DL-----VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
            L     V IALNKPVGI  TTE   + NIV+FV H +R+FPIGRLDK+S+GLI +T++G
Sbjct: 62  KLGGRKHVYIALNKPVGITCTTESSVKGNIVEFVGHEQRIFPIGRLDKESEGLILMTSNG 121

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           ++VN+ILRA N H+KEYLV V+KP+T+EF+RGM+ GV I    T  C   + A F FRI 
Sbjct: 122 NIVNEILRAENRHKKEYLVAVNKPVTDEFLRGMARGVRIHNETTLPCHTARIAKFGFRIV 181

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           L QGLNRQIR M   FGY V +L R RI N+ L+ +  G+WR+L+D EL
Sbjct: 182 LEQGLNRQIRLMAAEFGYRVTQLRRVRIDNIKLAALKPGQWRNLSDAEL 230



>UniRef100_A5ZYR1 Pseudouridine synthase n=1 Tax=Ruminococcus obeum
           ATCC 29174 RepID=A5ZYR1_9FIRM
          Length = 315

 Score =  236 bits (601), Expect = 2e-60
 Identities = 123/239 (51%), Positives = 168/239 (70%), Gaps = 3/239 (1%)

Query: 5   SSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREA 64
           +++R+NKY+S +G+CSRREAD+  + G V + GK    G+++     V ++G+ ++    
Sbjct: 11  TTIRINKYLSAAGVCSRREADQLTDAGRVTVAGKEIGTGERIPADAEVFLDGRPVKAETR 70

Query: 65  EDLVLIALNKPVGIV-STTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLV 123
           +  VL+   KP GIV ST +  +   + +F+++  RV+P+GRLDKDS+GL+ LTN GDLV
Sbjct: 71  Q--VLLLFYKPRGIVCSTKKQRQETTVTEFLDYPVRVYPVGRLDKDSEGLLLLTNQGDLV 128

Query: 124 NKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQ 183
           N+I+RAGN HEKEY VTVDK ITE FIR MS+GVPILGTVT+ C V K     F I L Q
Sbjct: 129 NRIMRAGNYHEKEYEVTVDKKITETFIRKMSSGVPILGTVTRPCTVYKTGDKSFSIILTQ 188

Query: 184 GLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSE 242
           GLNRQIRRMCE+ GY V  L+R RIMN++L G+  GE+R++  DE   L +LI +SSSE
Sbjct: 189 GLNRQIRRMCEYLGYHVCTLKRIRIMNLTLDGLKCGEYREICGDEWKKLNELIRDSSSE 247



>UniRef100_B4SPP6 Pseudouridine synthase n=1 Tax=Stenotrophomonas
           maltophilia R551-3 RepID=B4SPP6_STRM5
          Length = 240

 Score =  235 bits (600), Expect = 3e-60
 Identities = 123/229 (53%), Positives = 157/229 (68%), Gaps = 5/229 (2%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + RLNK+I+++G CSRREADR I    V +NG  A  G  V   D V V+GQ +  R A 
Sbjct: 2   TTRLNKHIADTGFCSRREADRLIAARRVTVNGHPAGTGAVVGEEDQVLVDGQPLRARVAR 61

Query: 66  DL-----VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
                  V IALNKPVG+  TTE   + NIVDFV H +R+FPIGRLDK+S+GLI +T++G
Sbjct: 62  KPGTRRHVYIALNKPVGVTCTTETSVKGNIVDFVGHEQRIFPIGRLDKESEGLILMTSNG 121

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           D+VN+ILRA N H+KEYLV V+KP+T+EF+RGM+ GV I   +T  CK  + A F FRIT
Sbjct: 122 DIVNQILRAENGHQKEYLVAVNKPVTDEFLRGMARGVRIHDQMTLPCKTSRIAKFGFRIT 181

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           L QGLNRQIR M   FGY V +L R RI N+ +  +  G+WR+LT+ EL
Sbjct: 182 LQQGLNRQIRLMAAEFGYRVTQLRRVRIDNIKIGALKPGQWRNLTEQEL 230



>UniRef100_C2RE30 RNA pseudouridine synthase n=1 Tax=Bacillus cereus
           m1550 RepID=C2RE30_BACCE
          Length = 229

 Score =  235 bits (600), Expect = 3e-60
 Identities = 118/223 (52%), Positives = 157/223 (70%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE DR I+ G V +NG+  T G  V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYISEAKSCSRRETDRLIKAGRVAINGEICTHGALVSDGDVVTIDGQVIAKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  D   DNI+D++N+ +R+FP+GRLDK S+GLI LTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAADHIEDNIIDYINYPERIFPVGRLDKASEGLILLTNDGGIANQI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ FI  MS+GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFIDEMSSGVKIKDGMTKPCKVTRVDQSTFRIVLTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ V KL+R RIMN+ L+ + +G+WRD+T +EL
Sbjct: 180 RQIRRMSRAFGFTVTKLKRERIMNIELNDLQVGKWRDITGEEL 222



>UniRef100_B2FHK9 Pseudouridine synthase n=2 Tax=Stenotrophomonas
           RepID=B2FHK9_STRMK
          Length = 240

 Score =  235 bits (600), Expect = 3e-60
 Identities = 123/229 (53%), Positives = 157/229 (68%), Gaps = 5/229 (2%)

Query: 6   SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAE 65
           + RLNK+I+++G CSRREADR I    V +NG  A  G  V   D V V+GQ +  R A 
Sbjct: 2   TTRLNKHIADTGFCSRREADRLIAARRVTVNGHPAGTGAVVGEEDQVLVDGQPLRARVAR 61

Query: 66  DL-----VLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG 120
                  V IALNKPVG+  TTE   + NIVDFV H +R+FPIGRLDK+S+GLI +T++G
Sbjct: 62  KPGARRHVYIALNKPVGVTCTTETSVKGNIVDFVGHEQRIFPIGRLDKESEGLILMTSNG 121

Query: 121 DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT 180
           D+VN+ILRA N H+KEYLV V+KP+T+EF+RGM+ GV I   +T  CK  + A F FRIT
Sbjct: 122 DIVNQILRAENGHQKEYLVAVNKPVTDEFLRGMARGVRIHDQMTLPCKTSRIAKFGFRIT 181

Query: 181 LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           L QGLNRQIR M   FGY V +L R RI N+ +  +  G+WR+LT+ EL
Sbjct: 182 LQQGLNRQIRLMAAEFGYRVTQLRRVRIDNIKIGALKPGQWRNLTEQEL 230



>UniRef100_UPI0001979D27 pseudouridine synthase n=1
           Tax=Clostridiales bacterium 1_7_47_FAA
           RepID=UPI0001979D27
          Length = 294

 Score =  235 bits (599), Expect = 4e-60
 Identities = 125/255 (49%), Positives = 175/255 (68%), Gaps = 8/255 (3%)

Query: 8   RLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPG-----DVVKVNGQLIEPR 62
           RLNK++S+ G+CSRREADR IE G V+++G  A +G +VKPG     D V VNG      
Sbjct: 35  RLNKWLSQMGVCSRREADRLIEAGKVWVDGSPAAMGQKVKPGQKVVCDGVPVNGGSGADS 94

Query: 63  EAEDLVLIALNKPVGIVSTTEDGERD-NIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGD 121
                VL+ +NKP GIV TT D +R  NIV+++++ +R++P+GRLDKDS+GL+ +TN GD
Sbjct: 95  RKPKPVLLVVNKPRGIVCTTSDKDRAMNIVEYLDYPERIYPVGRLDKDSEGLLLMTNQGD 154

Query: 122 LVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPI--LGTVTKKCKVKKEAPFVFRI 179
           LVNKI+R+GN HEKEY+VTVD+P+T++ +  M+ G+ +  L TVT+ CKVK+     F I
Sbjct: 155 LVNKIMRSGNAHEKEYIVTVDRPLTDDAMDRMAKGIYLRELETVTRPCKVKRVDGKTFSI 214

Query: 180 TLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENS 239
            L QGLNRQIRRMCE  G  V++L R RIMN+ L G+  G  R++  +E  +L +L+ +S
Sbjct: 215 ILTQGLNRQIRRMCEACGCHVERLVRVRIMNIRLDGLETGASREVGQEEYRELMRLLRDS 274

Query: 240 SSEVKPKAKAKPKTA 254
           SS    + +A P  A
Sbjct: 275 SSLPGGRGRAVPHKA 289



>UniRef100_Q633P3 Pseudouridine synthase n=1 Tax=Bacillus cereus
           E33L RepID=Q633P3_BACCZ
          Length = 229

 Score =  234 bits (598), Expect = 5e-60
 Identities = 118/223 (52%), Positives = 156/223 (69%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE DR I+ G V +NGK  T G  V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYISEAKSCSRRETDRLIKAGRVAINGKICTHGALVNEGDVVTIDGQVIAKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  +    NI+D++N+ +R+FP+GRLDK S+GLI LTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAAEHIEGNIIDYINYPERIFPVGRLDKASEGLILLTNDGGIANQI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ FI  MS GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYIVTVDKPFTDWFIDEMSGGVKIKDGMTKPCKVTRVDQSTFRIVLTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ VKKL+R RIMN+ L+ + +G+WRD+T +EL
Sbjct: 180 RQIRRMSRAFGFTVKKLKRERIMNIELNDLEVGKWRDITAEEL 222



>UniRef100_C2ZDL0 RNA pseudouridine synthase n=2 Tax=Bacillus cereus
           RepID=C2ZDL0_BACCE
          Length = 229

 Score =  234 bits (597), Expect = 7e-60
 Identities = 117/223 (52%), Positives = 157/223 (70%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE DR I+ G V +NG+  T G  V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYISEAKSCSRRETDRLIKAGRVCINGEMCTHGVLVSDGDVVMIDGQVIAKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  D   DNI+D++++ +R+FP+GRLDK S+GLI LTN G + ++I
Sbjct: 61  -VYIAFHKPVGITCTAADHIEDNIIDYIHYPERIFPVGRLDKASEGLILLTNDGGIAHQI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ FI  MS+GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFINEMSSGVKIKDGMTKPCKVTRVDQSTFRIVLTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ V KL+R RIMN+ L+G+  G+WRD+T +EL
Sbjct: 180 RQIRRMSRAFGFTVTKLKRVRIMNIELNGLESGKWRDITAEEL 222



>UniRef100_A8SZ92 Pseudouridine synthase n=1 Tax=Coprococcus
           eutactus ATCC 27759 RepID=A8SZ92_9FIRM
          Length = 234

 Score =  234 bits (596), Expect = 9e-60
 Identities = 118/230 (51%), Positives = 161/230 (70%), Gaps = 2/230 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +RLNKY+SE+G+CSRR AD +IE G V +NG+ A +G +V PGDVV   G+ ++ ++   
Sbjct: 5   IRLNKYLSEAGVCSRRAADTHIENGKVTINGETAVMGQKVMPGDVVTFMGRKVQQKDRT- 63

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V++A NKP+G+  T    + DNI D +++  R+  +GRLDKDSQGL+ LTN GDL N I
Sbjct: 64  -VILAYNKPIGLTCTASKADPDNIFDHIDYPIRLQYVGRLDKDSQGLLLLTNDGDLSNAI 122

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
            ++ N+HEKEY V V++ ITE+FIR MS GVPIL TVTKKCKV+K     F I L QGLN
Sbjct: 123 QKSVNNHEKEYRVRVNREITEDFIRKMSEGVPILDTVTKKCKVRKIDDRSFMIVLTQGLN 182

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLI 236
           RQIRRMC+  GY V  L+R R+ NV L  +  GE R+L+ +E  +L +++
Sbjct: 183 RQIRRMCDALGYRVVNLKRVRVCNVKLGNMRPGELRELSREEEAELRRIV 232



>UniRef100_C3ERE6 RNA pseudouridine synthase n=1 Tax=Bacillus
           thuringiensis serovar kurstaki str. T03a001
           RepID=C3ERE6_BACTK
          Length = 229

 Score =  233 bits (595), Expect = 1e-59
 Identities = 117/223 (52%), Positives = 157/223 (70%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE DR I+ G V +NG+  T G+ V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYISEAKSCSRRETDRLIKAGRVAINGEICTHGELVSDGDVVTIDGQVIVKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  D   DNI+D++N+ +R+FP+GRLDK S+GLI LTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAADHIEDNIIDYINYPERIFPVGRLDKVSEGLILLTNDGGIANRI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ FI  MS+GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFINEMSSGVKIKDGMTKPCKVTRVDQSTFRIVLTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ V KL+R RIMN+ L+ + +G+WR +T +EL
Sbjct: 180 RQIRRMSRAFGFTVIKLKRVRIMNIELNELEVGKWRSVTAEEL 222



>UniRef100_Q72ZJ4 Pseudouridine synthase n=1 Tax=Bacillus cereus
           ATCC 10987 RepID=Q72ZJ4_BACC1
          Length = 229

 Score =  233 bits (594), Expect = 2e-59
 Identities = 117/223 (52%), Positives = 156/223 (69%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE DR I+ G V +NG+  T G  V  GDVV ++GQ++   E E 
Sbjct: 1   MKINQYISEAKSCSRRETDRLIKAGRVAINGEICTHGAIVNDGDVVTIDGQVLAKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  D   DNI+D++N+ +R+FP+GRLDK S+GLI LTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAADHIEDNIIDYINYPERIFPVGRLDKASEGLILLTNDGAIANQI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ FI  MS+GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFIDEMSSGVKIKDGMTKPCKVTRVDQSTFRIVLTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ V KL+R RIMN+ L  + +G+WR++TD EL
Sbjct: 180 RQIRRMSRAFGFTVTKLKRERIMNIELDDLEVGKWRNITDGEL 222



>UniRef100_B5UNA1 Pseudouridine synthase n=5 Tax=Bacillus cereus
           RepID=B5UNA1_BACCE
          Length = 229

 Score =  233 bits (594), Expect = 2e-59
 Identities = 117/223 (52%), Positives = 157/223 (70%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE DR I+ G V +NG+  T G+ V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYISEAKSCSRRETDRLIKAGRVAINGEICTHGELVSDGDVVTIDGQVIVKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  D   DNI+D++N+ +R+FP+GRLDK S+GLI LTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAADHIEDNIIDYINYPERIFPVGRLDKASEGLILLTNDGGIANRI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ FI  MS+GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFIDEMSSGVKIKDGMTKPCKVTRVDQSTFRIVLTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ V KL+R RIMN+ L+ + +G+WR +T +EL
Sbjct: 180 RQIRRMSRAFGFTVIKLKRVRIMNIELNELEVGKWRSVTAEEL 222



>UniRef100_C1ETY9 RNA pseudouridine synthase family protein n=4
           Tax=Bacillus cereus group RepID=C1ETY9_BACC3
          Length = 229

 Score =  233 bits (594), Expect = 2e-59
 Identities = 116/223 (52%), Positives = 157/223 (70%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE DR I+ G V +NG+  T G  V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYISEANSCSRRETDRLIKAGRVAINGEICTHGALVNEGDVVTIDGQVIAKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  D   DNI++++N+ +R+FP+GRLDK S+GLI LTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAADHIDDNIIEYINYPERIFPVGRLDKASEGLILLTNDGGIANQI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ F+  MS+GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFMNEMSSGVKIKDGMTKPCKVTRVDQSTFRIVLTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ V KL+R RIMN+ L+ + +G+WRD+T +EL
Sbjct: 180 RQIRRMSRAFGFTVTKLKRERIMNIELNDLEVGKWRDITAEEL 222



>UniRef100_B7JR56 Pseudouridine synthase n=5 Tax=Bacillus cereus
           group RepID=B7JR56_BACC0
          Length = 229

 Score =  233 bits (594), Expect = 2e-59
 Identities = 116/223 (52%), Positives = 156/223 (69%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE DR I+ G V +NG+  T G  V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYISEANSCSRRETDRLIKAGRVAINGEICTHGALVNEGDVVTIDGQVIAKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  +    NI+D++N+ +R+FP+GRLDK S+GLI LTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAAEHIEGNIIDYINYPERIFPVGRLDKASEGLILLTNDGGIANQI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ FI  MS+GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFINEMSSGVKIKDGITKPCKVTRVDKSTFRIVLTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ V KL+R RIMN+ L+ + +G+WRD+T +EL
Sbjct: 180 RQIRRMSRAFGFTVTKLKRERIMNIELNDLEVGKWRDITAEEL 222



>UniRef100_C3DR30 RNA pseudouridine synthase n=1 Tax=Bacillus
           thuringiensis serovar sotto str. T04001
           RepID=C3DR30_BACTS
          Length = 229

 Score =  233 bits (593), Expect = 2e-59
 Identities = 117/223 (52%), Positives = 156/223 (69%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE DR I+ G V +NG+  T G  V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYISEAKSCSRRETDRLIKAGRVAINGEICTHGALVSDGDVVTIDGQVIAKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  D   DNI+D++N+ +R+FP+GRLDK S+GLI LTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAADHIEDNIIDYINYPERIFPVGRLDKASEGLILLTNDGTIANQI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ FI  MS+GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFINEMSSGVKIKDGMTKPCKVTRVDQSTFRIILTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ V KL+R RIMN+ L+ + +G+WR +T +EL
Sbjct: 180 RQIRRMSRAFGFTVIKLKRVRIMNIELNELEVGKWRSVTSEEL 222



>UniRef100_C2VZT0 RNA pseudouridine synthase n=1 Tax=Bacillus cereus
           Rock3-42 RepID=C2VZT0_BACCE
          Length = 229

 Score =  233 bits (593), Expect = 2e-59
 Identities = 116/223 (52%), Positives = 157/223 (70%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE DR I+ G V +NG+  T G  V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYISEANSCSRRETDRLIKAGRVAINGEICTHGALVNEGDVVTIDGQVIAKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  +    NI+D++N+ +R+FP+GRLDK S+GLIFLTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAAEHIEGNIIDYINYPERIFPVGRLDKASEGLIFLTNDGGIANQI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ F+  MS+GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFMNEMSSGVKIKDGMTKPCKVTRVDQSTFRIVLTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ V KL+R RIMN+ L+ + +G+WRD+T +EL
Sbjct: 180 RQIRRMSRAFGFTVIKLKRERIMNIELNDLEVGKWRDITAEEL 222



>UniRef100_C3F7W0 RNA pseudouridine synthase n=1 Tax=Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1
           RepID=C3F7W0_BACTU
          Length = 229

 Score =  232 bits (592), Expect = 3e-59
 Identities = 115/223 (51%), Positives = 156/223 (69%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+Y+SE+  CSRRE DR I+ G V +NG+  T G  V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYLSEANSCSRRETDRLIKAGRVAINGEICTHGALVNEGDVVTIDGQVIAKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  +    NI+D++N+ +R+FP+GRLDK S+GLI LTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAAEHIEGNIIDYINYPERIFPVGRLDKASEGLILLTNDGGIANQI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ FI  MS+GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFINEMSSGVKIKDGITKPCKVTRVDKSTFRIVLTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ V KL+R RIMN+ L+ + +G+WRD+T +EL
Sbjct: 180 RQIRRMSRAFGFTVTKLKRERIMNIELNDLEVGKWRDITAEEL 222



>UniRef100_B3ZG68 Pseudouridine synthase n=1 Tax=Bacillus cereus
           NVH0597-99 RepID=B3ZG68_BACCE
          Length = 229

 Score =  232 bits (591), Expect = 3e-59
 Identities = 116/223 (52%), Positives = 156/223 (69%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE D  I+ G V +NG+  T G  V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYISEANSCSRRETDHLIKAGRVAINGEICTHGALVNEGDVVTIDGQVIAKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  +    NI+D++N+ +R+FP+GRLDK S+GLIFLTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAAEHIEGNIIDYINYPERIFPVGRLDKASEGLIFLTNDGGIANQI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ FI  MS+GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFINEMSSGVKIKDGMTKPCKVTRVDQSTFRIVLTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ V KL+R RIMN+ L+ + +G+WRD+T +EL
Sbjct: 180 RQIRRMSRAFGFTVIKLKRERIMNIELNDLEVGKWRDITAEEL 222



>UniRef100_B7IJV0 Pseudouridine synthase n=1 Tax=Bacillus cereus
           G9842 RepID=B7IJV0_BACC2
          Length = 229

 Score =  231 bits (589), Expect = 6e-59
 Identities = 116/223 (52%), Positives = 156/223 (69%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE DR I+ G V +NG+  T G  V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYISEAKSCSRRETDRLIKAGRVAINGEICTHGALVSDGDVVTIDGQVIAKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  +   DNI+D++N+ +R+FP+GRLDK S+GLI LTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAAEHIEDNIIDYINYPERIFPVGRLDKASEGLILLTNDGTIANQI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ FI  MS+GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFINEMSSGVKIKDGMTKPCKVTRVDQSTFRIILTQGMN 179

Query: 187 RQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDEL 229
           RQIRRM   FG+ V KL+R RIMN+ L+ + +G+WR +T +EL
Sbjct: 180 RQIRRMSRAFGFTVIKLKRVRIMNIELNELEVGKWRSVTSEEL 222



>UniRef100_B7HF66 Pseudouridine synthase n=1 Tax=Bacillus cereus
           B4264 RepID=B7HF66_BACC4
          Length = 229

 Score =  231 bits (588), Expect = 8e-59
 Identities = 117/223 (52%), Positives = 155/223 (69%), Gaps = 1/223 (0%)

Query: 7   VRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAED 66
           +++N+YISE+  CSRRE DR I+ G V +NG+  T G  V  GDVV ++GQ+I   E E 
Sbjct: 1   MKINQYISEAKSCSRRETDRLIKAGRVAINGEICTHGALVSDGDVVTIDGQVIAKEEKEK 60

Query: 67  LVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 126
            V IA +KPVGI  T  D   DNI+D++N+ +R+FP+GRLDK S+GLI LTN G + N+I
Sbjct: 61  -VYIAFHKPVGITCTAADHIEDNIIDYINYPERIFPVGRLDKASEGLILLTNDGGIANQI 119

Query: 127 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLN 186
           L   ++HEKEY+VTVDKP T+ FI  MS GV I   +TK CKV +     FRI L QG+N
Sbjct: 120 LHGDHEHEKEYVVTVDKPFTDWFIDEMSRGVKIKDGMTKPCKVTRVDQSTFRIVLTQGMN 179

Query: 187 RQIRRMCEH