Score E
Sequences producing significant alignments: (bits) Value
UniRef100_P24200 5-methylcytosine-specific restriction enzyme A ... 568 e-160
UniRef100_A9BU78 HNH endonuclease n=1 Tax=Delftia acidovorans SP... 130 2e-28
UniRef100_C3K0B7 Putative 5-methylcytosine-specific restriction ... 122 3e-26
UniRef100_Q6ALL3 Probable 5-methylcytosine-specific restriction ... 121 6e-26
UniRef100_Q2Y8M1 HNH nuclease n=1 Tax=Nitrosospira multiformis A... 118 5e-25
UniRef100_A0KIQ7 Probable 5-methylcytosine-specific restriction ... 117 1e-24
UniRef100_A9AKD6 5-methylcytosine-specific restriction enzyme A ... 115 3e-24
UniRef100_A6QD09 5-methylcytosine-specific restriction enzyme A ... 115 3e-24
UniRef100_B4EJL0 Putative restriction endonuclease n=1 Tax=Burkh... 114 7e-24
UniRef100_Q1YK78 Putative 5-methylcytosine-specific restriction ... 107 9e-22
UniRef100_UPI00016A2859 HNH endonuclease n=1 Tax=Burkholderia th... 105 4e-21
UniRef100_C2UHE5 HNH nuclease n=1 Tax=Bacillus cereus Rock1-15 R... 102 5e-20
UniRef100_Q3K870 HNH endonuclease n=1 Tax=Pseudomonas fluorescen... 101 6e-20
UniRef100_C3HSW4 HNH nuclease n=1 Tax=Bacillus thuringiensis ser... 98 9e-19
UniRef100_C3FAM5 HNH nuclease n=1 Tax=Bacillus thuringiensis ser... 98 9e-19
UniRef100_B1FDV2 HNH endonuclease n=1 Tax=Burkholderia ambifaria... 98 9e-19
UniRef100_C2P748 HNH nuclease n=1 Tax=Bacillus cereus 172560W Re... 95 6e-18
UniRef100_Q312Y0 HNH nuclease n=1 Tax=Desulfovibrio desulfurican... 94 2e-17
UniRef100_B3HG69 HNH endonuclease n=1 Tax=Escherichia coli B7A R... 93 2e-17
UniRef100_C0CKB6 Putative uncharacterized protein n=1 Tax=Blauti... 93 3e-17
UniRef100_A2SMM5 Putative uncharacterized protein n=1 Tax=Methyl... 91 9e-17
UniRef100_A8ZWC1 HNH endonuclease n=1 Tax=Desulfococcus oleovora... 90 2e-16
UniRef100_B5EI94 HNH endonuclease n=1 Tax=Geobacter bemidjiensis... 90 3e-16
UniRef100_B0NHX5 Putative uncharacterized protein n=1 Tax=Clostr... 90 3e-16
UniRef100_A6VSV6 HNH endonuclease n=1 Tax=Marinomonas sp. MWYL1 ... 89 3e-16
UniRef100_A3UNY9 Putative restriction endonuclease n=1 Tax=Vibri... 89 4e-16
UniRef100_A3XSF8 HNH endonuclease n=1 Tax=Vibrio sp. MED222 RepI... 88 7e-16
UniRef100_UPI00005F99AE COG1403: Restriction endonuclease n=1 Ta... 88 1e-15
UniRef100_A4SC99 HNH endonuclease n=1 Tax=Chlorobium phaeovibrio... 88 1e-15
UniRef100_C2KXT9 Putative uncharacterized protein n=1 Tax=Oribac... 87 1e-15
UniRef100_A1HS87 HNH endonuclease n=1 Tax=Thermosinus carboxydiv... 87 1e-15
UniRef100_C2WFU8 Restriction endonuclease n=1 Tax=Bacillus cereu... 86 3e-15
UniRef100_A3JQK6 HNH nuclease n=1 Tax=Rhodobacterales bacterium ... 86 4e-15
UniRef100_B7S191 HNH endonuclease domain protein n=1 Tax=marine ... 86 5e-15
UniRef100_Q1QEV2 HNH endonuclease n=1 Tax=Psychrobacter cryohalo... 85 6e-15
UniRef100_C0WRI9 Possible HNH endonuclease n=1 Tax=Lactobacillus... 85 6e-15
UniRef100_B4S2Y7 HNH nuclease n=1 Tax=Alteromonas macleodii 'Dee... 84 1e-14
UniRef100_A2PX36 HNH endonuclease (Fragment) n=1 Tax=Vibrio chol... 83 2e-14
UniRef100_C0N619 HNH endonuclease domain protein n=1 Tax=Methylo... 80 2e-13
UniRef100_C3I9U4 Restriction endonuclease n=1 Tax=Bacillus thuri... 80 2e-13
UniRef100_C3C627 Restriction endonuclease n=1 Tax=Bacillus thuri... 80 3e-13
UniRef100_Q080H4 HNH endonuclease n=1 Tax=Shewanella frigidimari... 79 3e-13
UniRef100_Q4A110 Putative restriction endonuclease n=1 Tax=Staph... 79 6e-13
UniRef100_C2Z778 Restriction endonuclease n=2 Tax=Bacillus cereu... 76 3e-12
UniRef100_Q0BZ66 Conserved domain protein n=1 Tax=Hyphomonas nep... 75 8e-12
UniRef100_B5HVM7 Putative uncharacterized protein n=1 Tax=Strept... 70 2e-10
UniRef100_A9F818 Putative restriction endonuclease n=1 Tax=Phaeo... 69 5e-10
UniRef100_B1ZMM6 HNH endonuclease n=1 Tax=Opitutus terrae PB90-1... 69 6e-10
UniRef100_B0N4T9 Putative uncharacterized protein n=1 Tax=Clostr... 66 3e-09
UniRef100_A8R8M0 Putative uncharacterized protein n=1 Tax=Eubact... 65 7e-09
UniRef100_Q3K789 HNH endonuclease n=1 Tax=Pseudomonas fluorescen... 64 1e-08
UniRef100_Q1L9I8 HNH nuclease n=1 Tax=Ralstonia metallidurans CH... 64 2e-08
UniRef100_B9NKB9 Predicted protein n=1 Tax=Populus trichocarpa R... 64 2e-08
UniRef100_Q9L0M9 Putative uncharacterized protein SCO4631 n=1 Ta... 63 3e-08
UniRef100_C2WLR5 5-methylcytosine-specific restriction enzyme A ... 61 1e-07
UniRef100_C2XB44 5-methylcytosine-specific restriction enzyme A ... 60 2e-07
UniRef100_A3US95 Putative restriction endonuclease n=1 Tax=Vibri... 60 2e-07
UniRef100_C2U711 Putative uncharacterized protein n=1 Tax=Bacill... 60 3e-07
UniRef100_Q0KFQ5 Predicted restriction endonuclease n=1 Tax=Rals... 59 5e-07
UniRef100_A0YK66 Putative uncharacterized protein n=1 Tax=Lyngby... 56 3e-06
UniRef100_UPI000196C23B hypothetical protein BRYFOR_03279 n=1 Ta... 56 4e-06
UniRef100_A3U4A6 E14 prophage-like protein n=1 Tax=Oceanicola ba... 56 4e-06
UniRef100_Q81E47 5-methylcytosine-specific restriction enzyme A ... 55 5e-06
UniRef100_Q4ZJH6 Putative recombinase n=1 Tax=Listeria monocytog... 55 7e-06
UniRef100_B4BAD4 Putative uncharacterized protein n=1 Tax=Clostr... 55 7e-06
UniRef100_Q723Z7 Conserved domain protein n=1 Tax=Listeria monoc... 55 9e-06
UniRef100_C0ZFI2 Putative uncharacterized protein n=1 Tax=Brevib... 54 1e-05
UniRef100_B0ACA5 Putative uncharacterized protein n=1 Tax=Clostr... 54 1e-05
UniRef100_Q8PRX6 5-methylcytosine-specific restriction enzyme A ... 54 1e-05
UniRef100_B2Q7M1 HNH endonuclease n=1 Tax=Exiguobacterium sp. AT... 54 2e-05
UniRef100_A7Z277 Putative uncharacterized protein n=1 Tax=Bacill... 53 3e-05
UniRef100_B3CDE4 Putative uncharacterized protein n=1 Tax=Bacter... 52 4e-05
UniRef100_UPI00006DCE53 hypothetical protein CdifQ_04003636 n=1 ... 52 6e-05
UniRef100_Q64YP3 Putative uncharacterized protein n=1 Tax=Bacter... 52 8e-05
UniRef100_A6TVA6 HNH endonuclease n=1 Tax=Alkaliphilus metallire... 51 1e-04
UniRef100_C0QGN0 Putative 5-methylcytosine-specific restriction ... 51 1e-04
UniRef100_Q3EYN0 HNH endonuclease family protein n=1 Tax=Bacillu... 51 1e-04
UniRef100_Q2BBA0 Putative uncharacterized protein n=1 Tax=Bacill... 51 1e-04
UniRef100_C3GU40 HNH endonuclease n=2 Tax=Bacillus thuringiensis... 51 1e-04
UniRef100_C2HHV6 Bacteriophage endonuclease n=1 Tax=Finegoldia m... 51 1e-04
UniRef100_Q6MJA3 Putative membrane protein n=1 Tax=Bdellovibrio ... 50 2e-04
UniRef100_B8KVR3 HNH endonuclease domain protein n=1 Tax=gamma p... 50 2e-04
UniRef100_B5G9G0 HNH endonuclease n=1 Tax=Streptomyces sp. SPB74... 50 2e-04
UniRef100_Q39IU3 Putative uncharacterized protein n=1 Tax=Burkho... 50 2e-04
UniRef100_B1ZSH9 Restriction endonuclease-like protein n=1 Tax=O... 50 2e-04
UniRef100_A3WFM1 5-methylcytosine-specific restriction enzyme A ... 50 3e-04
UniRef100_UPI0001A457FB hypothetical protein NEISUBOT_00645 n=1 ... 49 4e-04
UniRef100_Q3IBU7 Putative HNH endonuclease n=1 Tax=Pseudoalterom... 49 4e-04
UniRef100_UPI00016600C4 HNH endonuclease n=1 Tax=Klebsiella pneu... 49 6e-04
UniRef100_Q65MN2 McrA n=1 Tax=Bacillus licheniformis ATCC 14580 ... 49 6e-04
UniRef100_Q3ZAC8 HNH endonuclease domain protein n=1 Tax=Dehaloc... 49 6e-04
UniRef100_B3EB35 HNH endonuclease n=1 Tax=Geobacter lovleyi SZ R... 49 6e-04
UniRef100_Q6U5M9 Hnh n=1 Tax=Klebsiella pneumoniae RepID=Q6U5M9_... 49 6e-04
UniRef100_B3X2L2 Hnh n=1 Tax=Shigella dysenteriae 1012 RepID=B3X... 49 6e-04
UniRef100_Q8DMK2 Maturase; reverse transcriptase n=1 Tax=Thermos... 48 8e-04
UniRef100_C1MEX8 HNH endonuclease n=1 Tax=Citrobacter sp. 30_2 R... 48 8e-04
UniRef100_Q3Z7J0 HNH endonuclease domain protein n=1 Tax=Dehaloc... 48 0.001
UniRef100_Q5YRW6 Putative endonuclease n=1 Tax=Nocardia farcinic... 47 0.001
UniRef100_Q6EME6 Hnh endonuclease n=1 Tax=Escherichia coli RepID... 47 0.001
UniRef100_A1F1U9 HNH endonuclease domain protein n=1 Tax=Vibrio ... 47 0.001
UniRef100_Q2FQI6 HNH endonuclease n=1 Tax=Methanospirillum hunga... 47 0.001
UniRef100_Q8DMT0 Reverse transcriptase n=1 Tax=Thermosynechococc... 47 0.002
UniRef100_Q8DJR1 Reverse transcriptase n=1 Tax=Thermosynechococc... 47 0.002
UniRef100_Q8CM00 Reverse transcriptase n=1 Tax=Thermosynechococc... 47 0.002
UniRef100_Q0HF94 Putative uncharacterized protein n=1 Tax=Shewan... 47 0.002
UniRef100_A0L1U4 HNH endonuclease n=1 Tax=Shewanella sp. ANA-3 R... 47 0.002
UniRef100_Q4C8B3 HNH endonuclease n=1 Tax=Crocosphaera watsonii ... 47 0.002
UniRef100_C3G8U4 HNH endonuclease n=1 Tax=Bacillus thuringiensis... 47 0.002
UniRef100_Q8SDH4 Putative uncharacterized protein n=1 Tax=Lactob... 47 0.002
UniRef100_Q46AN8 Putative uncharacterized protein n=1 Tax=Methan... 47 0.002
UniRef100_Q0RPY1 Tellurium resistance protein terE n=1 Tax=Frank... 46 0.003
UniRef100_B0K6Q9 HNH endonuclease n=1 Tax=Thermoanaerobacter sp.... 46 0.003
UniRef100_B4D4V1 HNH endonuclease n=1 Tax=Chthoniobacter flavus ... 46 0.003
UniRef100_A0ZAT3 Putative uncharacterized protein n=1 Tax=Nodula... 46 0.003
UniRef100_Q8TKB6 Hnh endonuclease n=1 Tax=Methanosarcina acetivo... 46 0.003
UniRef100_Q4C974 RNA-directed DNA polymerase n=1 Tax=Crocosphaer... 46 0.004
UniRef100_Q4C783 RNA-directed DNA polymerase (Reverse transcript... 46 0.004
UniRef100_Q4C6E0 HNH endonuclease n=1 Tax=Crocosphaera watsonii ... 46 0.004
UniRef100_C3RB64 Predicted protein n=1 Tax=Bacteroides sp. D4 Re... 46 0.004
UniRef100_B2Q9N3 HNH endonuclease n=1 Tax=Exiguobacterium sp. AT... 46 0.004
UniRef100_Q8DL77 Reverse transcriptase n=1 Tax=Thermosynechococc... 45 0.005
UniRef100_Q8DK67 Reverse transcriptase n=1 Tax=Thermosynechococc... 45 0.005
UniRef100_B8I839 HNH endonuclease n=1 Tax=Clostridium cellulolyt... 45 0.005
UniRef100_B8I0D2 HNH endonuclease n=1 Tax=Clostridium cellulolyt... 45 0.005
UniRef100_A4T2Q8 HNH endonuclease n=1 Tax=Mycobacterium gilvum P... 45 0.005
UniRef100_A3DFY5 HNH endonuclease n=1 Tax=Clostridium thermocell... 45 0.005
UniRef100_Q4CA22 RNA-directed DNA polymerase (Reverse transcript... 45 0.005
UniRef100_Q4BZL5 HNH endonuclease n=1 Tax=Crocosphaera watsonii ... 45 0.005
UniRef100_Q4BXV9 HNH endonuclease n=1 Tax=Crocosphaera watsonii ... 45 0.005
UniRef100_B5CRX9 Putative uncharacterized protein n=1 Tax=Rumino... 45 0.005
UniRef100_B4BFN4 HNH endonuclease n=1 Tax=Clostridium thermocell... 45 0.005
UniRef100_A0YT41 Putative uncharacterized protein n=1 Tax=Lyngby... 45 0.005
UniRef100_Q538B5 MnlI restriction endonuclease n=1 Tax=Moraxella... 45 0.007
UniRef100_Q4BZ69 HNH endonuclease n=1 Tax=Crocosphaera watsonii ... 45 0.007
UniRef100_C2ECC9 Recombinase n=1 Tax=Lactobacillus ruminis ATCC ... 45 0.007
UniRef100_B6G4P2 Putative uncharacterized protein n=1 Tax=Collin... 45 0.007
UniRef100_B4AUS3 RNA-directed DNA polymerase (Reverse transcript... 45 0.007
UniRef100_B0MB23 Putative uncharacterized protein n=1 Tax=Anaero... 45 0.007
UniRef100_A5P8I1 Putative uncharacterized protein n=1 Tax=Erythr... 45 0.007
UniRef100_UPI00005F8CDE COG0419: ATPase involved in DNA repair n... 45 0.009
UniRef100_B9MNG3 HNH endonuclease n=1 Tax=Anaerocellum thermophi... 45 0.009
UniRef100_A6THN6 Putative uncharacterized protein n=1 Tax=Klebsi... 45 0.009
UniRef100_A5V9C7 HNH endonuclease n=1 Tax=Sphingomonas wittichii... 45 0.009
UniRef100_C3AFV2 Putative uncharacterized protein n=1 Tax=Bacill... 45 0.009
UniRef100_B3Z1Y7 Gp45 n=1 Tax=Bacillus cereus W RepID=B3Z1Y7_BACCE 45 0.009
UniRef100_A6FSV0 HNH nuclease n=1 Tax=Roseobacter sp. AzwK-3b Re... 45 0.009
UniRef100_Q82CY5 Putative uncharacterized protein n=1 Tax=Strept... 44 0.012
UniRef100_Q3A0C0 HNH endonuclease family protein n=1 Tax=Pelobac... 44 0.012
UniRef100_Q0VRW5 Reverse transcriptase/maturase homolog n=1 Tax=... 44 0.012
UniRef100_B9JB56 Putative uncharacterized protein n=1 Tax=Agroba... 44 0.012
UniRef100_B1MMU0 Probable HNH endonuclease n=1 Tax=Mycobacterium... 44 0.012
UniRef100_A0LM25 HNH endonuclease n=1 Tax=Syntrophobacter fumaro... 44 0.012
UniRef100_Q4CAS8 HNH endonuclease n=1 Tax=Crocosphaera watsonii ... 44 0.012
UniRef100_Q4C0L4 RNA-directed DNA polymerase (Reverse transcript... 44 0.012
UniRef100_Q4BXA1 HNH endonuclease n=1 Tax=Crocosphaera watsonii ... 44 0.012
UniRef100_C3M8C3 Group II intron encoded reverse transcriptase n... 44 0.012
UniRef100_C2LK08 Putative uncharacterized protein n=1 Tax=Proteu... 44 0.012
UniRef100_A7I926 HNH endonuclease n=1 Tax=Candidatus Methanoregu... 44 0.012
UniRef100_Q0HZ96 RNA-directed DNA polymerase n=1 Tax=Shewanella ... 44 0.016
UniRef100_A5N0L8 Phage-related protein n=2 Tax=Clostridium kluyv... 44 0.016
UniRef100_B0JVV8 RNA-directed DNA polymerase n=1 Tax=Microcystis... 44 0.016
UniRef100_A8ZKQ7 RNA-directed DNA polymerase n=1 Tax=Acaryochlor... 44 0.016
UniRef100_B0N9V8 Putative uncharacterized protein n=1 Tax=Clostr... 44 0.016
UniRef100_B2IX42 HNH endonuclease n=1 Tax=Nostoc punctiforme PCC... 44 0.021
UniRef100_B1YFT2 HNH endonuclease n=1 Tax=Exiguobacterium sibiri... 44 0.021
UniRef100_A9IAX2 Reverse transcriptase n=1 Tax=Bordetella petrii... 44 0.021
UniRef100_Q9R669 Group II SELF-splicing intron ORF (Fragments) n... 44 0.021
UniRef100_Q8GMB4 Group II intron-associated open reading frame n... 44 0.021
UniRef100_Q4C4V3 RNA-directed DNA polymerase n=1 Tax=Crocosphaer... 44 0.021
UniRef100_Q4C417 HNH endonuclease n=1 Tax=Crocosphaera watsonii ... 44 0.021
UniRef100_Q4BYQ4 HNH endonuclease n=2 Tax=Crocosphaera watsonii ... 44 0.021
UniRef100_Q1YWU8 Putative uncharacterized protein n=1 Tax=Photob... 44 0.021
UniRef100_C3X695 Predicted protein n=1 Tax=Oxalobacter formigene... 44 0.021
UniRef100_C3IFK0 5-methylcytosine-specific restriction enzyme A ... 44 0.021
UniRef100_C3BJL8 Paclitaxel/taxanoid biosynthesis susceptibility... 44 0.021
UniRef100_C3AIY7 Hnh endonuclease n=1 Tax=Bacillus mycoides Rock... 44 0.021
UniRef100_C1DQC3 RNA-directed DNA polymerase n=1 Tax=Azotobacter... 44 0.021
UniRef100_C1AET6 Putative uncharacterized protein n=3 Tax=Mycoba... 44 0.021
UniRef100_B0MFF1 Putative uncharacterized protein n=1 Tax=Anaero... 44 0.021
UniRef100_A3YQ82 MnlI restriction endonuclease n=1 Tax=Campyloba... 44 0.021
UniRef100_A1ZG09 Paclitaxel/taxanoid biosynthesis susceptibility... 44 0.021
UniRef100_O53196 HNH endonuclease family protein n=5 Tax=Mycobac... 44 0.021
UniRef100_Q8YJX0 Alr8560 protein n=1 Tax=Nostoc sp. PCC 7120 Rep... 43 0.027
UniRef100_Q5YZE7 Putative uncharacterized protein n=1 Tax=Nocard... 43 0.027
UniRef100_B8ZRA7 Putative uncharacterized protein n=2 Tax=Mycoba... 43 0.027
UniRef100_B8G6B2 HNH endonuclease n=1 Tax=Chloroflexus aggregans... 43 0.027
UniRef100_B7GM48 Restriction endonuclease, McrA/HNH family, phag... 43 0.027
UniRef100_B5Y2L5 HNH endonuclease domain protein n=1 Tax=Klebsie... 43 0.027
UniRef100_B4SDY4 HNH nuclease n=1 Tax=Pelodictyon phaeoclathrati... 43 0.027
UniRef100_A1REN7 HNH nuclease n=1 Tax=Shewanella sp. W3-18-1 Rep... 43 0.027
UniRef100_Q4C651 HNH endonuclease n=1 Tax=Crocosphaera watsonii ... 43 0.027
UniRef100_Q4C5H9 RNA-directed DNA polymerase n=1 Tax=Crocosphaer... 43 0.027
UniRef100_Q4C2F9 HNH endonuclease n=1 Tax=Crocosphaera watsonii ... 43 0.027
UniRef100_Q4C286 RNA-directed DNA polymerase (Reverse transcript... 43 0.027
UniRef100_C2AHV9 Restriction endonuclease n=1 Tax=Thermomonospor... 43 0.027
UniRef100_Q67M53 Conserved domain protein n=1 Tax=Symbiobacteriu... 43 0.036
UniRef100_Q2JH75 HNH endonuclease domain protein n=2 Tax=Synecho... 43 0.036
UniRef100_B7JSJ9 DNA helicase, putative n=1 Tax=Bacillus cereus ... 43 0.036
UniRef100_Q4C739 RNA-directed DNA polymerase (Reverse transcript... 43 0.036
UniRef100_Q4C2M6 RNA-directed DNA polymerase (Reverse transcript... 43 0.036
UniRef100_Q4C2H4 HNH endonuclease n=1 Tax=Crocosphaera watsonii ... 43 0.036
UniRef100_Q4C1P0 RNA-directed DNA polymerase (Reverse transcript... 43 0.036
UniRef100_Q4BYS8 RNA-directed DNA polymerase (Reverse transcript... 43 0.036
UniRef100_Q4BUJ8 HNH endonuclease n=1 Tax=Crocosphaera watsonii ... 43 0.036
UniRef100_C3H0B3 Putative uncharacterized protein n=1 Tax=Bacill... 43 0.036
UniRef100_B0VJM1 Putative ATP dependant helicase yprA n=1 Tax=Ca... 43 0.036
UniRef100_A7C7H9 HNH endonuclease n=1 Tax=Beggiatoa sp. PS RepID... 43 0.036
UniRef100_B9ZDV6 HNH endonuclease n=1 Tax=Natrialba magadii ATCC... 43 0.036
UniRef100_Q8YYJ2 Alr0856 protein n=1 Tax=Nostoc sp. PCC 7120 Rep... 42 0.046
UniRef100_Q73EG9 HNH endonuclease domain protein n=1 Tax=Bacillu... 42 0.046
UniRef100_Q6LSI1 Putative uncharacterized protein MLL7993 n=1 Ta... 42 0.046
UniRef100_Q21AN9 HNH endonuclease n=1 Tax=Rhodopseudomonas palus... 42 0.046
UniRef100_B7K683 HNH endonuclease n=1 Tax=Cyanothece sp. PCC 880... 42 0.046
UniRef100_B4SCA5 HNH nuclease n=1 Tax=Pelodictyon phaeoclathrati... 42 0.046
UniRef100_B2JR48 Putative uncharacterized protein n=1 Tax=Burkho... 42 0.046
UniRef100_A9B2D5 HNH endonuclease n=1 Tax=Herpetosiphon aurantia... 42 0.046
UniRef100_A4G659 Putative restriction endonuclease n=1 Tax=Hermi... 42 0.046
UniRef100_A0QDE3 HNH endonuclease family protein n=2 Tax=Mycobac... 42 0.046
UniRef100_Q1PZ76 Conserved hypothetical endonuclease protein n=1... 42 0.046
UniRef100_B9NZ87 HNH nuclease n=1 Tax=Prochlorococcus marinus st... 42 0.046
UniRef100_B4AYW5 HNH endonuclease n=1 Tax=Cyanothece sp. PCC 782... 42 0.046
UniRef100_A6FSB3 HNH nuclease n=1 Tax=Roseobacter sp. AzwK-3b Re... 42 0.046
UniRef100_A4F3L2 Putative uncharacterized protein ORF6 n=1 Tax=P... 42 0.046
UniRef100_A4BER6 Putative uncharacterized protein n=1 Tax=Reinek... 42 0.046
UniRef100_A3YTT4 Putative uncharacterized protein n=1 Tax=Synech... 42 0.046
UniRef100_Q8HA82 Sb56 n=2 Tax=root RepID=Q8HA82_9CAUD 42 0.046
UniRef100_Q6UAS2 Gp60 n=1 Tax=Klebsiella phage phiKO2 RepID=Q6UA... 42 0.046
UniRef100_A5YK77 Gp109 n=1 Tax=Mycobacterium phage Tweety RepID=... 42 0.046
UniRef100_Q8YZ58 Asl0629 protein n=1 Tax=Nostoc sp. PCC 7120 Rep... 42 0.061
UniRef100_Q7V3P2 HNH endonuclease:HNH nuclease n=1 Tax=Prochloro... 42 0.061
UniRef100_Q02TI9 Putative reverse transcriptase n=1 Tax=Pseudomo... 42 0.061
UniRef100_B2HNH7 Putative uncharacterized protein n=1 Tax=Mycoba... 42 0.061
UniRef100_A0PU44 Putative uncharacterized protein n=1 Tax=Mycoba... 42 0.061
UniRef100_C1SP87 Predicted restriction endonuclease n=1 Tax=Deni... 42 0.061
UniRef100_B9APN7 Putative uncharacterized protein n=1 Tax=Prevot... 42 0.061
UniRef100_B4AXL5 HNH endonuclease n=1 Tax=Cyanothece sp. PCC 782... 42 0.061
UniRef100_A9GYN9 Putative uncharacterized protein n=1 Tax=Roseob... 42 0.061
UniRef100_A3X5U3 Putative uncharacterized protein n=1 Tax=Roseob... 42 0.061
UniRef100_A1ZX32 RNA-directed DNA polymerase n=1 Tax=Microscilla... 42 0.061
UniRef100_Q9RZ97 TerF-related protein n=1 Tax=Deinococcus radiod... 42 0.079
UniRef100_Q3M4C7 HNH endonuclease n=1 Tax=Anabaena variabilis AT... 42 0.079
UniRef100_Q31DF3 HNH nuclease n=1 Tax=Prochlorococcus marinus st... 42 0.079
UniRef100_B0RAZ3 Putative uncharacterized protein n=1 Tax=Clavib... 42 0.079
UniRef100_A9B5H7 HNH endonuclease n=1 Tax=Herpetosiphon aurantia... 42 0.079
UniRef100_A8ZX65 HNH endonuclease n=1 Tax=Desulfococcus oleovora... 42 0.079
UniRef100_A8LGA4 Stress protein n=1 Tax=Frankia sp. EAN1pec RepI... 42 0.079
UniRef100_A5CTW1 Putative restriction endonuclease n=1 Tax=Clavi... 42 0.079
UniRef100_A0R1B7 HNH endonuclease family protein n=1 Tax=Mycobac... 42 0.079
UniRef100_Q8VUW2 Putative uncharacterized protein 5'-methylcytos... 42 0.079
UniRef100_Q8VTF0 Putative HP0052-like protein n=1 Tax=Helicobact... 42 0.079
UniRef100_Q8VTD5 Putative HP0052-like protein n=1 Tax=Helicobact... 42 0.079
UniRef100_Q4MK42 Putative uncharacterized protein n=1 Tax=Bacill... 42 0.079
UniRef100_C2XQ54 HNH endonuclease n=1 Tax=Bacillus cereus AH603 ... 42 0.079
UniRef100_C2D7Q9 Putative uncharacterized protein n=1 Tax=Atopob... 42 0.079
UniRef100_C1U9W9 Restriction endonuclease n=1 Tax=Eggerthella le... 42 0.079
UniRef100_C1AVR9 Putative uncharacterized protein n=1 Tax=Rhodoc... 42 0.079
UniRef100_C0EP64 Putative uncharacterized protein n=1 Tax=Neisse... 42 0.079
UniRef100_A0YCZ6 Putative uncharacterized protein n=1 Tax=marine... 42 0.079
UniRef100_B9LX84 HNH endonuclease n=1 Tax=Halorubrum lacusprofun... 42 0.079
>UniRef100_P24200 5-methylcytosine-specific restriction enzyme A n=1
Tax=Escherichia coli K-12 RepID=MCRA_ECOLI
Length = 277
Score = 568 bits (1464), Expect = e-160
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVV 60
MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVV
Sbjct: 1 MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVV 60
Query: 61 VYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNR 120
VYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNR
Sbjct: 61 VYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNR 120
Query: 121 TKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPV 180
TKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPV
Sbjct: 121 TKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPV 180
Query: 181 EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT 240
EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT
Sbjct: 181 EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT 240
Query: 241 TDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
TDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK
Sbjct: 241 TDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
>UniRef100_A9BU78 HNH endonuclease n=1 Tax=Delftia acidovorans SPH-1
RepID=A9BU78_DELAS
Length = 330
Score = 130 bits (326), Expect = 2e-28
Identities = 57/111 (51%), Positives = 75/111 (67%)
Query: 165 LIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPY 224
L K ++P G+ P + R + RDP VKAW+L+++ G+CE C NAPF DG P+
Sbjct: 217 LENKKQAKPAGNSNPGTIIRQVAQFERDPAVKAWVLKKAAGVCECCSSNAPFESTDGQPF 276
Query: 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRL 275
LEVHH+ L+ GG+DT N VALCPNCHR LHY AKELIE +++ +NRL
Sbjct: 277 LEVHHIRKLAEGGSDTVSNTVALCPNCHRALHYGMRAKELIESIFIKVNRL 327
>UniRef100_C3K0B7 Putative 5-methylcytosine-specific restriction
enzyme n=1 Tax=Pseudomonas fluorescens SBW25
RepID=C3K0B7_PSEFL
Length = 237
Score = 122 bits (307), Expect = 3e-26
Identities = 61/133 (45%), Positives = 84/133 (63%), Gaps = 2/133 (1%)
Query: 146 SELSQPTDDESLLNMRVSKLIKKTLSQ-PEGSRKPVEVERLQKVYVRDPMVKAWILQQSK 204
S+ + T DE L R SKL ++ +Q P+G +P +V + +VRDP V+AW+L+++K
Sbjct: 105 SDDAAQTADEQTLIRRASKLQQQPFTQLPDGIAQPQKVSTVSTAFVRDPKVRAWVLKEAK 164
Query: 205 GICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKEL 264
GICE CG NAPF + DG P+LEVHHV L+ G+D N VALCPNCH+ H S +
Sbjct: 165 GICEGCGSNAPFEV-DGLPFLEVHHVKHLAQKGSDRISNAVALCPNCHQRCHRSSDRDAF 223
Query: 265 IEMLYVNINRLQK 277
E LY + RL +
Sbjct: 224 TEGLYAKVGRLAR 236
>UniRef100_Q6ALL3 Probable 5-methylcytosine-specific restriction
enzyme A n=1 Tax=Desulfotalea psychrophila
RepID=Q6ALL3_DESPS
Length = 237
Score = 121 bits (304), Expect = 6e-26
Identities = 81/220 (36%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 64 ASSSVRKHMHSLDERK---IHPGEYFTL---IGNSPRDIRLKMCGYQAYFSRTGRKEIPS 117
AS MHSL+ R + Y TL G + + +M +S GR+ +
Sbjct: 22 ASVDAYVEMHSLEARGKPFVKKAYYETLANTFGRTVKSYEYRMQNISYVYSLQGRQWVSG 81
Query: 118 GNRTKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLS-QPEGS 176
+ + +NV + D I + E L + N V KL K+ S P+G+
Sbjct: 82 LKPARNVGVNVIQMLEDL----IAKSEGQHLVAI----AYFNAAVEKLRKRPPSLPPKGN 133
Query: 177 RKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSG 236
+KP +VRDP V AW+L ++ G CE C +APF DG+P+LEVHHV L+
Sbjct: 134 KKPASFLSSGTRFVRDPEVVAWVLAEAAGHCECCESSAPFLREDGSPFLEVHHVQHLADH 193
Query: 237 GADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQ 276
G DT +N VALCPNCH ELHY KEL E L I RLQ
Sbjct: 194 GEDTINNAVALCPNCHSELHYGMGKKELAEELRAKITRLQ 233
>UniRef100_Q2Y8M1 HNH nuclease n=1 Tax=Nitrosospira multiformis ATCC
25196 RepID=Q2Y8M1_NITMU
Length = 226
Score = 118 bits (296), Expect = 5e-25
Identities = 57/115 (49%), Positives = 77/115 (66%), Gaps = 8/115 (6%)
Query: 167 KKTLSQPEGSRKP----VEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN 222
+K L +P G+ +P + V +L+ RDP VKAW+LQQ+ G CE+C K APF DG+
Sbjct: 115 QKDLPKPSGNPRPKRRRISVAQLE----RDPNVKAWVLQQAAGTCESCEKPAPFQGADGS 170
Query: 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
PYLE+H+V L+ GGAD N VALCPNCHRE+HY NA+ + LY + RL++
Sbjct: 171 PYLELHYVQGLADGGADAVSNAVALCPNCHREIHYGANAQAVEAWLYDTVQRLER 225
>UniRef100_A0KIQ7 Probable 5-methylcytosine-specific restriction
enzyme A n=1 Tax=Aeromonas hydrophila subsp. hydrophila
ATCC 7966 RepID=A0KIQ7_AERHH
Length = 246
Score = 117 bits (293), Expect = 1e-24
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
Query: 138 ASIIRGELSELS-QPTDDESLLNMRVSKL-IKKTLSQPEGSRKPVEVERLQKVYVRDPMV 195
A II L EL QP ++ +VS+ IK TL P G ++P + Y RDP V
Sbjct: 104 APIIERLLCELDGQPYTGKAAFEHQVSRYKIKPTLPMPIGIQEPQQRYGANTSYGRDPKV 163
Query: 196 KAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHREL 255
KAW+L + G CE+C + APF+ G+ +LEVHH+ L+ GG+DT N VALCPNCHREL
Sbjct: 164 KAWVLMTAVGRCESCAQPAPFHATTGDAFLEVHHLRTLAEGGSDTISNTVALCPNCHREL 223
Query: 256 HYSKNAKELIEMLYVNINRL 275
HY N + E LY + RL
Sbjct: 224 HYGVNQAQKREALYQALPRL 243
>UniRef100_A9AKD6 5-methylcytosine-specific restriction enzyme A n=2
Tax=Burkholderia multivorans RepID=A9AKD6_BURM1
Length = 242
Score = 115 bits (289), Expect = 3e-24
Identities = 55/112 (49%), Positives = 70/112 (62%)
Query: 164 KLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNP 223
+L + ++ P G+ +P RDP VKAW+L Q++G CE CG APF DG P
Sbjct: 128 RLKRVPVAPPTGNARPEVGYATVAQVRRDPAVKAWVLAQARGTCECCGNPAPFADADGLP 187
Query: 224 YLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRL 275
YLEVHHV L+ G D N VA+CPNCHRELHY + A+EL+E LY + RL
Sbjct: 188 YLEVHHVRRLAERGPDVISNAVAICPNCHRELHYGEKARELVERLYTRVPRL 239
>UniRef100_A6QD09 5-methylcytosine-specific restriction enzyme A n=1
Tax=Sulfurovum sp. NBC37-1 RepID=A6QD09_SULNB
Length = 225
Score = 115 bits (289), Expect = 3e-24
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Query: 141 IRGELSELSQPTDDESL-----LNMRVSKLIKKTLS-QPEGSRKPVEVERLQKVYVRDPM 194
+ E+ E+ + ++++L V KL+ K L +P+ +P + Y RDP
Sbjct: 82 VASEIEEIIKEIENQALSEPVSFQAEVDKLVHKKLQDKPKAVLEPKRYDIAITKYDRDPQ 141
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
+ AW+L +KGICE C K APF +DG P+LEVHH+ L+ G+D+ N +A+CPNCHRE
Sbjct: 142 IVAWVLMNAKGICECCNKEAPFVKDDGVPFLEVHHLRRLADDGSDSITNAIAICPNCHRE 201
Query: 255 LHYSKNAKELIEMLYVNINRL 275
LHY +N L+ +Y ++RL
Sbjct: 202 LHYGQNKDILLTTIYSQVSRL 222
>UniRef100_B4EJL0 Putative restriction endonuclease n=1
Tax=Burkholderia cenocepacia J2315 RepID=B4EJL0_BURCJ
Length = 242
Score = 114 bits (286), Expect = 7e-24
Identities = 54/111 (48%), Positives = 68/111 (61%)
Query: 165 LIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPY 224
L K ++ P G+ P RDP VKAW+L Q+ G CE C + APF DG PY
Sbjct: 129 LKKPQIAPPPGNASPEATRATVTQIRRDPSVKAWVLAQANGTCECCSRPAPFKGADGLPY 188
Query: 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRL 275
LEVHHV L+ G D N VA+CPNCHRELHY ++A++L+E LY + RL
Sbjct: 189 LEVHHVRKLAERGPDLVSNTVAVCPNCHRELHYGESARQLVERLYARLPRL 239
>UniRef100_Q1YK78 Putative 5-methylcytosine-specific restriction
enzyme n=1 Tax=Aurantimonas sp. SI85-9A1
RepID=Q1YK78_MOBAS
Length = 125
Score = 107 bits (268), Expect = 9e-22
Identities = 53/116 (45%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Query: 158 LNMRVSKL-IKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPF 216
L RVS+L + T++ P+G +P R V++RDP VKA++L+++ GICE C APF
Sbjct: 3 LERRVSRLSARATIAFPKGIVQPKHTTRTTIVFLRDPGVKAYVLRRAGGICEACDFPAPF 62
Query: 217 YLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNI 272
G +LEVHH+ PL+ GG+D N VALCPNCHR +H++ +A + E LY I
Sbjct: 63 KTALGGDFLEVHHLKPLAEGGSDRAQNAVALCPNCHRAMHHASDAGQRTERLYAKI 118
>UniRef100_UPI00016A2859 HNH endonuclease n=1 Tax=Burkholderia
thailandensis TXDOH RepID=UPI00016A2859
Length = 214
Score = 105 bits (262), Expect = 4e-21
Identities = 51/111 (45%), Positives = 73/111 (65%), Gaps = 2/111 (1%)
Query: 166 IKKTLSQ-PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPY 224
I+KTL + P+G++ P +VRD VKAW+L+++K CE C + APF +G P+
Sbjct: 102 IRKTLDERPDGNKAPGTATSTTTSFVRDLKVKAWVLKRAKDNCEACDQPAPFSGANG-PF 160
Query: 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRL 275
LEVHH+ L+ GG+DT N VA+CPNCHR LH+SK+A+ E +Y + L
Sbjct: 161 LEVHHLRKLADGGSDTVTNAVAVCPNCHRRLHFSKDARAYRETIYEKVTEL 211
>UniRef100_C2UHE5 HNH nuclease n=1 Tax=Bacillus cereus Rock1-15
RepID=C2UHE5_BACCE
Length = 350
Score = 102 bits (253), Expect = 5e-20
Identities = 57/111 (51%), Positives = 67/111 (60%), Gaps = 10/111 (9%)
Query: 155 ESLLNMRVSKLI-------KKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGIC 207
ES L +RV K K L Q E + VEV Q Y R+P V A IL+++ G C
Sbjct: 241 ESNLEIRVEKSRNIDSSKRKNRLEQAEKIPEVVEVVTTQ--YKRNPDVIAEILERANGYC 298
Query: 208 ENCGKNAPFY-LNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
E CG+ APF DG PYLEVHHV+PLS GG DT +N ALCPNCHR+ HY
Sbjct: 299 EECGQEAPFKRTKDGTPYLEVHHVVPLSEGGEDTVENATALCPNCHRKAHY 349
>UniRef100_Q3K870 HNH endonuclease n=1 Tax=Pseudomonas fluorescens
Pf0-1 RepID=Q3K870_PSEPF
Length = 237
Score = 101 bits (252), Expect = 6e-20
Identities = 47/104 (45%), Positives = 61/104 (58%)
Query: 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
P G P + R VK W+L++S+GICE CG+ APF DG P+LEVHH+
Sbjct: 132 PPGVLNPKQTSATVVRLSRKLNVKKWVLKRSQGICEGCGQKAPFQDADGKPFLEVHHLKH 191
Query: 233 LSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQ 276
L +GG D T N VALCPNCHR HYS + +E Y ++ L+
Sbjct: 192 LVNGGTDRTSNAVALCPNCHRRCHYSSDKEEFTAKFYRSVEGLE 235
>UniRef100_C3HSW4 HNH nuclease n=1 Tax=Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1 RepID=C3HSW4_BACTU
Length = 350
Score = 97.8 bits (242), Expect = 9e-19
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFY-LNDGNPYLEVHHVIP 232
+ +RKP VE + Y R+P V A +L+++ G CE C + APF DG PYLEVHHVIP
Sbjct: 265 KAARKPDVVEVVTTQYKRNPDVIAEVLERANGYCEECKQEAPFKRAKDGTPYLEVHHVIP 324
Query: 233 LSSGGADTTDNCVALCPNCHRELHY 257
L+ GG D+ +N V LCPNCHR+ HY
Sbjct: 325 LAQGGEDSVENAVGLCPNCHRKAHY 349
>UniRef100_C3FAM5 HNH nuclease n=1 Tax=Bacillus thuringiensis
serovar monterrey BGSC 4AJ1 RepID=C3FAM5_BACTU
Length = 350
Score = 97.8 bits (242), Expect = 9e-19
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFY-LNDGNPYLEVHHVIP 232
+ +RKP VE + Y R+P V A +L+++ G CE C + APF DG PYLEVHHVIP
Sbjct: 265 KAARKPDVVEVVTTQYKRNPDVIAEVLERANGYCEECKQEAPFKRAKDGTPYLEVHHVIP 324
Query: 233 LSSGGADTTDNCVALCPNCHRELHY 257
L+ GG D+ +N V LCPNCHR+ HY
Sbjct: 325 LAQGGEDSVENAVGLCPNCHRKAHY 349
>UniRef100_B1FDV2 HNH endonuclease n=1 Tax=Burkholderia ambifaria
IOP40-10 RepID=B1FDV2_9BURK
Length = 244
Score = 97.8 bits (242), Expect = 9e-19
Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 179 PVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN-PYLEVHHVIPLSSGG 237
P +V+ + +VYVR+P V A +L+++KG CE C K APF G+ PYLEVHH L+ GG
Sbjct: 161 PKKVQVVTQVYVRNPDVVADVLERAKGACERCTKPAPFVRRRGDAPYLEVHHRKQLADGG 220
Query: 238 ADTTDNCVALCPNCHRELHYSK 259
DT +N +ALCPNCHRE+HY K
Sbjct: 221 EDTVENAIALCPNCHREMHYGK 242
>UniRef100_C2P748 HNH nuclease n=1 Tax=Bacillus cereus 172560W
RepID=C2P748_BACCE
Length = 350
Score = 95.1 bits (235), Expect = 6e-18
Identities = 42/82 (51%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 177 RKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFY-LNDGNPYLEVHHVIPLSS 235
RKP VE + Y R+P V A +L+++ G CE C + APF DG PYLEVHHV+PL+
Sbjct: 268 RKPEVVEVVTSQYKRNPDVIAEVLERANGYCEECKQEAPFKRAKDGTPYLEVHHVVPLAQ 327
Query: 236 GGADTTDNCVALCPNCHRELHY 257
GG D+ +N V +CPNCHR+ H+
Sbjct: 328 GGEDSVENAVGMCPNCHRKAHF 349
>UniRef100_Q312Y0 HNH nuclease n=1 Tax=Desulfovibrio desulfuricans
subsp. desulfuricans str. G20 RepID=Q312Y0_DESDG
Length = 260
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 184 RLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN-PYLEVHHVIPLSSGGADTTD 242
R Q V+ R P+V A +L ++ G CE CG APF N PYLEVHHV PL+ GGADT
Sbjct: 173 REQAVFRRSPVVAARVLLRAGGFCECCGAPAPFVSRADNLPYLEVHHVRPLAEGGADTPA 232
Query: 243 NCVALCPNCHRELHY 257
NC+ALCPNCHR+ HY
Sbjct: 233 NCMALCPNCHRQFHY 247
>UniRef100_B3HG69 HNH endonuclease n=1 Tax=Escherichia coli B7A
RepID=B3HG69_ECOLX
Length = 241
Score = 93.2 bits (230), Expect = 2e-17
Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 161 RVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLND 220
++S + +K + E S+ P +E +VY R P V A +L ++ G C+ C ++APF D
Sbjct: 136 KLSSVERKQILATE-SKIPELIEVTTRVYKRSPYVVAEVLLRANGKCQYCKRDAPFLKED 194
Query: 221 GNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
G P+LEVHH+ LS GG D+ +N +ALCPNCHR+ HY
Sbjct: 195 GTPFLEVHHIEWLSKGGEDSVENAIALCPNCHRQAHY 231
>UniRef100_C0CKB6 Putative uncharacterized protein n=1 Tax=Blautia
hydrogenotrophica DSM 10507 RepID=C0CKB6_9FIRM
Length = 270
Score = 92.8 bits (229), Expect = 3e-17
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 147 ELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGI 206
EL +P D L+ S+ +++ R+P VE VY RDP +K I + ++G
Sbjct: 137 ELDEPED--RALSQLSSRELERRSKISRRERRPKTVETT--VYYRDPYLKELIKRIAEGK 192
Query: 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIE 266
C+ CG +APF + PYLE HH+ L+ GG DT DN VA+CPNCHR +H +++++
Sbjct: 193 CQFCGADAPFLDRNHEPYLEEHHIKRLADGGTDTIDNIVAICPNCHRRMHVLNREEDILK 252
Query: 267 MLYV 270
+ ++
Sbjct: 253 LRFI 256
>UniRef100_A2SMM5 Putative uncharacterized protein n=1
Tax=Methylibium petroleiphilum PM1 RepID=A2SMM5_METPP
Length = 220
Score = 91.3 bits (225), Expect = 9e-17
Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 175 GSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN-DGNPYLEVHHVIPL 233
G KP V V++R+P V A +L ++ G CE C ++APF DG PYLEVHH PL
Sbjct: 136 GQAKPERVIVQTTVFMRNPAVAAEVLLRANGHCELCRQSAPFKRRKDGTPYLEVHHRKPL 195
Query: 234 SSGGADTTDNCVALCPNCHRELHYS 258
S GG DT N +ALCPNCHR HY+
Sbjct: 196 SDGGNDTVQNAIALCPNCHRRAHYA 220
>UniRef100_A8ZWC1 HNH endonuclease n=1 Tax=Desulfococcus oleovorans
Hxd3 RepID=A8ZWC1_DESOH
Length = 303
Score = 90.1 bits (222), Expect = 2e-16
Identities = 41/97 (42%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDG-NPYLEVHHVI 231
P G +P ++ R+ Y RDP +++++++++KG CE CG+ F ++DG N YLE HH+I
Sbjct: 201 PPGISEPEKISRMSPSYSRDPKIRSFVIKRAKGRCEYCGEQG-FLMSDGQNYYLEAHHII 259
Query: 232 PLSSGGADTTDNCVALCPNCHRELHYSKNAKEL-IEM 267
L+ G DT +N +ALCP HRE H+ N ++L +EM
Sbjct: 260 ALADEGEDTVENVIALCPKHHREAHFGANKEKLEVEM 296
>UniRef100_B5EI94 HNH endonuclease n=1 Tax=Geobacter bemidjiensis
Bem RepID=B5EI94_GEOBB
Length = 233
Score = 89.7 bits (221), Expect = 3e-16
Identities = 45/128 (35%), Positives = 68/128 (53%)
Query: 150 QPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICEN 209
+PT +E ++ S I P+G +P Y RD V+A+++ ++KG CE
Sbjct: 95 EPTMNEEKVHEFASNAINDLDEIPQGVAEPERSSHTTSSYARDHKVRAYVIARAKGTCEY 154
Query: 210 CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLY 269
CG+ N + YLE HHVI L+ G DT DN +ALCP H+E H+ N E+ E +
Sbjct: 155 CGELGFLMSNGKSYYLEAHHVIALADEGRDTPDNVIALCPKHHKEAHFGINRDEIEEEMM 214
Query: 270 VNINRLQK 277
+ ++ L K
Sbjct: 215 IFLSTLSK 222
>UniRef100_B0NHX5 Putative uncharacterized protein n=1
Tax=Clostridium scindens ATCC 35704 RepID=B0NHX5_EUBSP
Length = 277
Score = 89.7 bits (221), Expect = 3e-16
Identities = 42/80 (52%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
YVRD V + +++ GIC+ C K APF DGNP+LE HH+I L+ GGAD+ +N VALC
Sbjct: 191 YVRDRYVSEYAKRRAHGICQLCDKPAPFSDCDGNPFLETHHIIWLADGGADSIENTVALC 250
Query: 249 PNCHRELHYSKNAKELIEML 268
PNCHR++H + N E +E L
Sbjct: 251 PNCHRKMH-TLNLSEDVEKL 269
>UniRef100_A6VSV6 HNH endonuclease n=1 Tax=Marinomonas sp. MWYL1
RepID=A6VSV6_MARMS
Length = 240
Score = 89.4 bits (220), Expect = 3e-16
Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLN-DGNPYLEVHHVIPLSSGGADTTDNCVA 246
VY R+P V L+++ G+CE CGK APF + DG+PYLEVHH+ L+ G DT +N A
Sbjct: 169 VYQRNPDVITETLERAAGVCERCGKGAPFIRSKDGSPYLEVHHIQRLADNGPDTLENTKA 228
Query: 247 LCPNCHRELHY 257
LCPNCHRELH+
Sbjct: 229 LCPNCHRELHF 239
>UniRef100_A3UNY9 Putative restriction endonuclease n=1 Tax=Vibrio
splendidus 12B01 RepID=A3UNY9_VIBSP
Length = 273
Score = 89.0 bits (219), Expect = 4e-16
Identities = 49/119 (41%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 146 SELSQPTDDESLLNMRVSKLIKKTL-SQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSK 204
S L++PT +SL +R L L + P+ E+L V R +K + +++
Sbjct: 147 SYLTKPTKSKSLKQLRDIALASTPLQADPK--------EQLTHVKYRSEAIKLYAKKRAN 198
Query: 205 GICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKE 263
GICE CG +PF G PYLEVHH+ L+ GGAD +N +ALCP CHRE HYS A +
Sbjct: 199 GICEGCGVPSPFETKSG-PYLEVHHLTRLADGGADCPENVIALCPTCHREAHYSVGAAD 256
>UniRef100_A3XSF8 HNH endonuclease n=1 Tax=Vibrio sp. MED222
RepID=A3XSF8_9VIBR
Length = 273
Score = 88.2 bits (217), Expect = 7e-16
Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 144 ELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQS 203
++S L++PT +SL +R L L K E+L V R +K + +++
Sbjct: 145 KVSYLTKPTKSKSLKQLRDIALASTPL-------KADPKEQLTHVKYRSEAIKLYAKKRA 197
Query: 204 KGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKE 263
G+CE CG +PF G PYLEVHH+ L+ GGAD +N +ALCP CHR+ HYS A +
Sbjct: 198 NGLCEGCGVPSPFETKSG-PYLEVHHLTRLADGGADCPENVIALCPTCHRKAHYSVEAAD 256
>UniRef100_UPI00005F99AE COG1403: Restriction endonuclease n=1
Tax=Yersinia frederiksenii ATCC 33641
RepID=UPI00005F99AE
Length = 238
Score = 87.8 bits (216), Expect = 1e-15
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
+ R+P+V A +L + G C++C ++APF DG PYLEVHHV L++GG D+ +N +ALC
Sbjct: 159 FKRNPLVVAEVLALAGGKCQSCLRDAPFKREDGRPYLEVHHVEWLANGGEDSVENAIALC 218
Query: 249 PNCHRELHY 257
PNCHRE HY
Sbjct: 219 PNCHREAHY 227
>UniRef100_A4SC99 HNH endonuclease n=1 Tax=Chlorobium
phaeovibrioides DSM 265 RepID=A4SC99_PROVI
Length = 222
Score = 87.8 bits (216), Expect = 1e-15
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 139 SIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAW 198
++I E +E+++ D S+ R +++ ++P Y R+P +
Sbjct: 111 ALIETETAEIAKSRTDTSVA--RNERILN-------AEKRPKRQRVYSYTYQRNPDIVVE 161
Query: 199 ILQQSKGICENCGKNAPFY-LNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
L +++G CENC APF +DG P+LEVHH+ LS GG DT +N VALCPNCHRE HY
Sbjct: 162 ALHRAEGFCENCKNPAPFKRASDGTPFLEVHHIRSLSDGGEDTLENVVALCPNCHREKHY 221
>UniRef100_C2KXT9 Putative uncharacterized protein n=1
Tax=Oribacterium sinus F0268 RepID=C2KXT9_9FIRM
Length = 324
Score = 87.4 bits (215), Expect = 1e-15
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Query: 151 PTDDESLLNMR--VSKLIK--KTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGI 206
PT D+ L + +S+L K K + +K EVE +Q R +V + + +++ G+
Sbjct: 201 PTVDKGLAKKKSKLSQLKKDLKDFDKQHPKKKLTEVEVVQ----RSSLVSSIVKERAAGV 256
Query: 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKEL 264
C+ C K APFY G YLE HHV+ ++ GGAD +N VALCPNCHR++H +++++
Sbjct: 257 CQLCNKPAPFYNKSGEAYLECHHVVWIAKGGADEVNNAVALCPNCHRKMHILDDSEDV 314
>UniRef100_A1HS87 HNH endonuclease n=1 Tax=Thermosinus
carboxydivorans Nor1 RepID=A1HS87_9FIRM
Length = 275
Score = 87.4 bits (215), Expect = 1e-15
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Query: 159 NMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYL 218
N ++K K++ S+ R V +Y R+ V + +++ GIC+ C + APF
Sbjct: 165 NETLAKRAKESQSEKTSVRNAVTT-----IYERNAYVSEYAKRRANGICQLCEREAPFKN 219
Query: 219 NDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
DG PYLE HH+ LS GG DT DN VALCPNCHR++H
Sbjct: 220 KDGEPYLETHHIEWLSRGGTDTLDNTVALCPNCHRKMH 257
>UniRef100_C2WFU8 Restriction endonuclease n=1 Tax=Bacillus cereus
Rock3-44 RepID=C2WFU8_BACCE
Length = 254
Score = 86.3 bits (212), Expect = 3e-15
Identities = 54/141 (38%), Positives = 83/141 (58%), Gaps = 7/141 (4%)
Query: 138 ASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQ-KVYVRDPMVK 196
++II EL L Q D + R++ K +Q E S V V +Q K + R+P V
Sbjct: 115 STIINEEL--LKQNYDKKEQKARRLTNEEVKNKAQ-EASSNRVGVRNIQSKTFDRNPYVT 171
Query: 197 AWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+ + + GIC+ C K APF +G PYLE HH+ LS GG D+ +N VALCPNCH+++H
Sbjct: 172 IYAKRWADGICQLCEKPAPFINKEGEPYLETHHIEWLSQGGPDSIENTVALCPNCHKKMH 231
Query: 257 Y--SKNAKE-LIEMLYVNINR 274
S++ K+ L++ ++ NI++
Sbjct: 232 VVDSQDDKDKLLKKVHQNISQ 252
>UniRef100_A3JQK6 HNH nuclease n=1 Tax=Rhodobacterales bacterium
HTCC2150 RepID=A3JQK6_9RHOB
Length = 371
Score = 85.9 bits (211), Expect = 4e-15
Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
Query: 145 LSELSQPTDDESLLNMRVSKLIK-----KTLSQPEGSRKPVEVERLQKVYVRDPMVKAWI 199
LS+L E+ L +V K +K + + + P + + ++ R+P V A +
Sbjct: 246 LSDLQSVAAAETSLVEQVQKSLKLDPKARQKRLADAPKLPEKQKATTTIFKRNPDVIAEV 305
Query: 200 LQQSKGICENCGKNAPF-YLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
L ++ G CE C ++APF +DG PYLEVHH IPL+ G D+ DN VALCPNCHR H
Sbjct: 306 LFRANGTCEGCRQSAPFDRRSDGTPYLEVHHKIPLAKDGHDSVDNAVALCPNCHRREH 363
>UniRef100_B7S191 HNH endonuclease domain protein n=1 Tax=marine
gamma proteobacterium HTCC2148 RepID=B7S191_9GAMM
Length = 273
Score = 85.5 bits (210), Expect = 5e-15
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 11/121 (9%)
Query: 147 ELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGI 206
+++ D+ LLN SK G+ + VE K Y RDP + + +++ G
Sbjct: 156 KMAHKLSDQELLNRAASK-------SSAGASRSVET----KYYERDPWISEYAKRRAGGK 204
Query: 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIE 266
C+ C +APF G PYLE HH+ L++GG D+ N VALCPNCHR++H + ++++
Sbjct: 205 CQLCESDAPFISKAGEPYLETHHIEWLANGGEDSISNTVALCPNCHRKMHNIADNNDVVK 264
Query: 267 M 267
+
Sbjct: 265 L 265
>UniRef100_Q1QEV2 HNH endonuclease n=1 Tax=Psychrobacter
cryohalolentis K5 RepID=Q1QEV2_PSYCK
Length = 282
Score = 85.1 bits (209), Expect = 6e-15
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 183 ERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
E++Q + R +K + +++ GICE C + APF G PYLEVHH+ L+ GGAD
Sbjct: 185 EKIQSIQNRSTAIKLYAKKRANGICEGCNEIAPFETKSG-PYLEVHHLTRLADGGADLPQ 243
Query: 243 NCVALCPNCHRELHYSKNAKELIEML 268
N +ALCP CHR+ HYS N E L
Sbjct: 244 NVIALCPTCHRKAHYSLNHLEFNNQL 269
>UniRef100_C0WRI9 Possible HNH endonuclease n=1 Tax=Lactobacillus
buchneri ATCC 11577 RepID=C0WRI9_LACBU
Length = 193
Score = 85.1 bits (209), Expect = 6e-15
Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Query: 140 IIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQK-VYVRDPMVKAW 198
I E+ S+ ++++ M + KLI+ + +G + ++VR+ +
Sbjct: 49 IANKEVLHQSEIKQEQAVKKMPIKKLIESVKTHEQGKTAKTSCREVTTTMFVRNANNRHL 108
Query: 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
L SKG+C+ CG+ APF G PYLEVHH+ S GG D +N +A+CPNCHR++H
Sbjct: 109 ALYFSKGVCQLCGEPAPFKDKTGQPYLEVHHIDWFSQGGKDVIENEIAICPNCHRKMHII 168
Query: 259 KNAKELI 265
++ +++
Sbjct: 169 QDPNDVL 175
>UniRef100_B4S2Y7 HNH nuclease n=1 Tax=Alteromonas macleodii 'Deep
ecotype' RepID=B4S2Y7_ALTMD
Length = 116
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 180 VEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN-DGNPYLEVHHVIPLSSGGA 238
VEV LQ R+P V A +L ++KGIC +C APF DG+PYLEVHH+ L+ GG
Sbjct: 41 VEVSVLQ----RNPDVVAEVLFRAKGICGSCKNPAPFSRRKDGSPYLEVHHIQQLAHGGE 96
Query: 239 DTTDNCVALCPNCHRELHY 257
DT +N +ALCPNCHR+ H+
Sbjct: 97 DTLENAIALCPNCHRQKHF 115
>UniRef100_A2PX36 HNH endonuclease (Fragment) n=1 Tax=Vibrio
cholerae MZO-3 RepID=A2PX36_VIBCH
Length = 263
Score = 83.2 bits (204), Expect = 2e-14
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 183 ERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
E++ + R +K + +++ G+CE CG +PF G PY+EVHH+ L+ GGAD +
Sbjct: 167 EQVTHIRYRSEDIKLYAKKRANGVCEACGSKSPFETKTG-PYIEVHHLTRLADGGADCPE 225
Query: 243 NCVALCPNCHRELHYSKNAKELIEML 268
N +ALCP CHR HYS + KE E L
Sbjct: 226 NVIALCPTCHRRAHYSIDNKEFNEKL 251
>UniRef100_C0N619 HNH endonuclease domain protein n=1
Tax=Methylophaga thiooxidans RepID=C0N619_9GAMM
Length = 274
Score = 80.5 bits (197), Expect = 2e-13
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 155 ESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNA 214
+SLL +R + L K + ++ ER Q Y R ++ ++ +++ G CE C A
Sbjct: 157 KSLLELREAALEKPSHTKNAS-------ERRQSAYYRSKALRLYVRKRAGGKCEACAVPA 209
Query: 215 PFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINR 274
PF G PY+E HH+ ++ GG D N + LCPNCHR HY+KN +E + L +
Sbjct: 210 PFESRKG-PYIECHHLHRVADGGPDHPMNVIGLCPNCHRRAHYAKNFREFNDSLKPVVRE 268
Query: 275 LQK 277
L+K
Sbjct: 269 LEK 271
>UniRef100_C3I9U4 Restriction endonuclease n=1 Tax=Bacillus
thuringiensis IBL 200 RepID=C3I9U4_BACTU
Length = 212
Score = 80.1 bits (196), Expect = 2e-13
Identities = 38/74 (51%), Positives = 45/74 (60%)
Query: 183 ERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
E K YVRD V + +++ GICE C + APF GNPYLE HHV LS GG D+
Sbjct: 118 EATTKTYVRDEYVAQYAKERANGICELCDQPAPFLDKKGNPYLESHHVEWLSRGGKDSIY 177
Query: 243 NCVALCPNCHRELH 256
N V +C NCHR LH
Sbjct: 178 NTVGVCANCHRRLH 191
>UniRef100_C3C627 Restriction endonuclease n=1 Tax=Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1
RepID=C3C627_BACTU
Length = 333
Score = 79.7 bits (195), Expect = 3e-13
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 159 NMRVSKLIKKTLSQPEGSRKPVEVERLQKV--YVRDPMVKAWILQQSKGICENCGKNAPF 216
N + KL + L + P +R K Y R+ V + +++ GICE C + APF
Sbjct: 210 NKKARKLDYQKLKERAKKATPSSNKRYTKTETYQRNEFVAEFSKRRANGICELCEQQAPF 269
Query: 217 YLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEM 267
+GNPYLE HHV LS GG DT N V +C NCHR LH + +++++
Sbjct: 270 EDKEGNPYLESHHVEWLSEGGEDTIYNTVGVCANCHRRLHVLNDENDVMKL 320
>UniRef100_Q080H4 HNH endonuclease n=1 Tax=Shewanella frigidimarina
NCIMB 400 RepID=Q080H4_SHEFN
Length = 309
Score = 79.3 bits (194), Expect = 3e-13
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQ 202
GE++E + +DDE L ++ ++ + P + Y R VK + L+
Sbjct: 184 GEINEATFISDDE---------LWERICTENPKRKSPKKTTTETVGYERSEFVKEYALRH 234
Query: 203 SKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAK 262
+ G C+ C PF G +LEVHH+ LS GG D +N V LCPNCHR++H +AK
Sbjct: 235 ANGKCQLCNNAGPFATKSGRNFLEVHHIDWLSKGGLDMPENVVGLCPNCHRKMHNINDAK 294
Query: 263 EL 264
++
Sbjct: 295 DI 296
>UniRef100_Q4A110 Putative restriction endonuclease n=1
Tax=Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305 RepID=Q4A110_STAS1
Length = 328
Score = 78.6 bits (192), Expect = 6e-13
Identities = 37/74 (50%), Positives = 48/74 (64%)
Query: 183 ERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
E + KVY R+ V A + +S G C+ C K APF +G YLE HHV L++GG D+ D
Sbjct: 232 EAVTKVYARNIHVAAHVKNRSNGYCDLCNKPAPFKDRNGRAYLECHHVDWLANGGKDSID 291
Query: 243 NCVALCPNCHRELH 256
N VAL PNCHR++H
Sbjct: 292 NAVALDPNCHRKMH 305
>UniRef100_C2Z778 Restriction endonuclease n=2 Tax=Bacillus cereus
RepID=C2Z778_BACCE
Length = 331
Score = 76.3 bits (186), Expect = 3e-12
Identities = 42/95 (44%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 164 KLIKKTLSQPEGSRKPVEVERLQKV--YVRDPMVKAWILQQSKGICENCGKNAPFYLNDG 221
KL + L + PV +R K Y R+ V + +++ GICE C + APF G
Sbjct: 213 KLDCQELKERAKKAVPVSNKRYTKTETYQRNEFVAEFSKRRANGICELCEQKAPFEDKKG 272
Query: 222 NPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
NPYLE HHV LS GG DT N V +C NCHR LH
Sbjct: 273 NPYLESHHVEWLSEGGEDTIYNTVGVCANCHRRLH 307
>UniRef100_Q0BZ66 Conserved domain protein n=1 Tax=Hyphomonas
neptunium ATCC 15444 RepID=Q0BZ66_HYPNA
Length = 343
Score = 74.7 bits (182), Expect = 8e-12
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 139 SIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAW 198
++ E E + D S+ ++R S T + + P E R+ + R +KA+
Sbjct: 206 AVADSETDEEIEDQPDTSIDDLRTSAYEAATAVR---NSNPKEARRVYRQ--RSAKIKAY 260
Query: 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
IL ++ G+CE G+ APF G+PYLEVHH LS G D A+ P HRE+H+
Sbjct: 261 ILARAGGVCELTGEKAPFLTKSGHPYLEVHHTQRLSDDGLDHPRWVAAISPTAHREIHFG 320
Query: 259 KNAKELIEML 268
+ EL E L
Sbjct: 321 ERGDELNERL 330
>UniRef100_B5HVM7 Putative uncharacterized protein n=1
Tax=Streptomyces sviceus ATCC 29083 RepID=B5HVM7_9ACTO
Length = 479
Score = 70.1 bits (170), Expect = 2e-10
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 148 LSQPTDDESLLNM--RVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKG 205
L PT +ES + R+++ + + G +KP ++ YVRDP +A ++++ +G
Sbjct: 346 LEAPTTEESDEDAYRRLAQKAEANAERRRGLKKPTLADK----YVRDPSARAAVIKRCRG 401
Query: 206 ICEN--CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKE 263
CEN C + G P L+V HV L+ G D N +ALCPNCH Y +N +
Sbjct: 402 RCENPQCAGHPTELTTAGLPILQVDHVKDLAKKGPDVPWNMIALCPNCHALKTYGENREN 461
Query: 264 LIEMLYVNINRLQK 277
L +L RL +
Sbjct: 462 LRRLLTATARRLHE 475
>UniRef100_A9F818 Putative restriction endonuclease n=1
Tax=Phaeobacter gallaeciensis 2.10 RepID=A9F818_9RHOB
Length = 220
Score = 68.9 bits (167), Expect = 5e-10
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
V+VR+ + Q + G+C+ C K F G+ +LEVHH LS GG DT +N VAL
Sbjct: 146 VFVRNSEFSRRVRQAANGVCDAC-KGKTFQTQSGDWFLEVHHKKWLSEGGTDTIENMVAL 204
Query: 248 CPNCHRELHYSKNAK 262
CPNCHR+ H+ +
Sbjct: 205 CPNCHRQEHFGSTRR 219
>UniRef100_B1ZMM6 HNH endonuclease n=1 Tax=Opitutus terrae PB90-1
RepID=B1ZMM6_OPITP
Length = 279
Score = 68.6 bits (166), Expect = 6e-10
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R+P V+ W+L++S+G+CE G + +L+VHH++ + G D NCVALCPN
Sbjct: 194 RNPKVRRWVLKRSRGVCERLGCHIT---RSFAGFLDVHHILGAAKG--DRVWNCVALCPN 248
Query: 251 CHRELHYSKNAKEL 264
CHRE H + N K++
Sbjct: 249 CHRETHCAPNRKKI 262
>UniRef100_B0N4T9 Putative uncharacterized protein n=1
Tax=Clostridium ramosum DSM 1402 RepID=B0N4T9_9FIRM
Length = 329
Score = 66.2 bits (160), Expect = 3e-09
Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 178 KPVEVE-RLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN-DGNPYLEVHHVIPLS- 234
KP VE + KVY R+ V L + CE K+ F DG PY E HH+IP++
Sbjct: 206 KPKLVENKFNKVYKRNKAVAINALGIANFSCEIDKKHKTFKRKKDGVPYTEPHHLIPMAF 265
Query: 235 ----SGGADTTDNCVALCPNCHRELHYSKNAKELIEMLY 269
D +N V+LC NCH E+HY +NA+ELI LY
Sbjct: 266 QDEFDFSIDIEENIVSLCSNCHNEIHYGENARELITKLY 304
>UniRef100_A8R8M0 Putative uncharacterized protein n=1
Tax=Eubacterium dolichum DSM 3991 RepID=A8R8M0_9FIRM
Length = 508
Score = 65.1 bits (157), Expect = 7e-09
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 203 SKGICENCGKNAPFYL-NDGNPYLEVHHVIPLSSG-----GADTTDNCVALCPNCHRELH 256
SK CE K+ F NDG PY+E HH+IP+S D +N V+LC CHRE+H
Sbjct: 411 SKHQCEIDAKHISFKRKNDGFPYMEAHHLIPMSKQDLFEYSLDVEENIVSLCSQCHREIH 470
Query: 257 YSKNAKELIEMLYVNINRLQK 277
+ +NA LI+ LY + +L K
Sbjct: 471 HGENADALIKKLYNDRKKLLK 491
>UniRef100_Q3K789 HNH endonuclease n=1 Tax=Pseudomonas fluorescens
Pf0-1 RepID=Q3K789_PSEPF
Length = 323
Score = 64.3 bits (155), Expect = 1e-08
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 13/111 (11%)
Query: 162 VSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICEN--CGKNAPFYLN 219
V+ L L + E SR V R+ RDP V+ ++ + G CE CG + +
Sbjct: 212 VAGLDLSLLGRDEASRYQATVSRV----ARDPSVRKAVIDRCNGRCERPGCGASRSY--- 264
Query: 220 DGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYV 270
+ +L+VHH++ + +D NCVALCPNCHR+ H+S + ++L + L +
Sbjct: 265 --SGFLDVHHILGVEI--SDRVANCVALCPNCHRDAHFSADRQKLNDSLLI 311
>UniRef100_Q1L9I8 HNH nuclease n=1 Tax=Ralstonia metallidurans CH34
RepID=Q1L9I8_RALME
Length = 348
Score = 63.5 bits (153), Expect = 2e-08
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 17/100 (17%)
Query: 175 GSRKPVEVERLQKVYV-RDPMVKAWILQQSKGICEN--CGKNAPFYLNDGNPYLEVHHVI 231
GS P E ++ YV RD V+ +L ++ G+CEN C APF +L+VHH+
Sbjct: 248 GSDSP-ERRTAERSYVKRDDRVRRQVLDRADGVCENPTCSIRAPF-----PSFLDVHHIF 301
Query: 232 PLSSGGADTTD---NCVALCPNCHRELHYSKNAKELIEML 268
G +T+D NCVA+CPNCHR HY+ + + E L
Sbjct: 302 -----GVETSDRAWNCVAICPNCHRAAHYAPDRSAINEEL 336
>UniRef100_B9NKB9 Predicted protein n=1 Tax=Populus trichocarpa
RepID=B9NKB9_POPTR
Length = 222
Score = 63.5 bits (153), Expect = 2e-08
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 17/100 (17%)
Query: 175 GSRKPVEVERLQKVYV-RDPMVKAWILQQSKGICEN--CGKNAPFYLNDGNPYLEVHHVI 231
GS P E ++ YV RD V+ +L ++ G+CEN C APF +L+VHH+
Sbjct: 122 GSDSP-ERRTAERSYVKRDDRVRRQVLDRADGVCENPTCSIRAPF-----PSFLDVHHIF 175
Query: 232 PLSSGGADTTD---NCVALCPNCHRELHYSKNAKELIEML 268
G +T+D NCVA+CPNCHR HY+ + + E L
Sbjct: 176 -----GVETSDRAWNCVAICPNCHRAAHYAPDRSAINEEL 210
>UniRef100_Q9L0M9 Putative uncharacterized protein SCO4631 n=1
Tax=Streptomyces coelicolor RepID=Q9L0M9_STRCO
Length = 560
Score = 63.2 bits (152), Expect = 3e-08
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 152 TDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICEN-- 209
+DDE+ R+++ + + +KP ++ YVRDP + +L++ + CEN
Sbjct: 435 SDDEAY--RRLAQKAEANAERRGQLKKPTVADK----YVRDPSARGAVLKRCQKRCENPE 488
Query: 210 CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLY 269
C + G P L+V HV L+ GG D N +ALCPNCH Y N L +L
Sbjct: 489 CAGHPTELTKAGLPILQVDHVNDLAKGGPDVPWNMIALCPNCHALKTYGANKVRLQRLLA 548
Query: 270 VNINRLQK 277
RL +
Sbjct: 549 ATARRLHE 556
>UniRef100_C2WLR5 5-methylcytosine-specific restriction enzyme A n=2
Tax=Bacillus cereus group RepID=C2WLR5_BACCE
Length = 166
Score = 60.8 bits (146), Expect = 1e-07
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 148 LSQPTDDESLLNMRVSKLIKKTL----SQPEGSRKPVEVERLQKVYVRDPMVKAWILQQS 203
LS+ +E + + K +PE +RK ++E ++V+ RDP ++Q+
Sbjct: 7 LSEDEQEEDMYQANIDSDFSKVKIAEEEKPE-NRKKTKMESGREVWPRDPKKAKQAIKQA 65
Query: 204 KGICENCGKNAPFYLNDGNP-YLEVHHVIPLS-----SGGADTTDNCVALCPNCHRELHY 257
+ CE + F Y+E HH+IPL D N V++CPNCHR +HY
Sbjct: 66 EFKCEIDDTHETFVSEASRKNYMEAHHLIPLRMQHDFENSLDVVGNIVSICPNCHRLIHY 125
Query: 258 --SKNAKELIEMLY 269
K+ K+++E+L+
Sbjct: 126 GRDKDKKKVLELLF 139
>UniRef100_C2XB44 5-methylcytosine-specific restriction enzyme A n=1
Tax=Bacillus cereus F65185 RepID=C2XB44_BACCE
Length = 166
Score = 60.5 bits (145), Expect = 2e-07
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 148 LSQPTDDESLLNMRVSKLIKKTL----SQPEGSRKPVEVERLQKVYVRDPMVKAWILQQS 203
LS+ +E + + K +PE +RK ++E ++V+ RDP ++Q+
Sbjct: 7 LSEDEQEEDMYQANIDSDFSKVKIAEEEKPE-NRKKTKMESGREVWPRDPKKAKQAIKQA 65
Query: 204 KGICENCGKNAPFYLNDGNP-YLEVHHVIPLS-----SGGADTTDNCVALCPNCHRELHY 257
+ CE + F Y+E HH+IPL D N V++CPNCHR +HY
Sbjct: 66 EFKCEIDDTHETFVSEASRKNYMEAHHLIPLRMQHDFEDSLDVVGNIVSICPNCHRLIHY 125
Query: 258 --SKNAKELIEMLY 269
K+ K+++E+L+
Sbjct: 126 GRDKDKKKVLELLF 139
>UniRef100_A3US95 Putative restriction endonuclease n=1 Tax=Vibrio
splendidus 12B01 RepID=A3US95_VIBSP
Length = 259
Score = 60.1 bits (144), Expect = 2e-07
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 153 DDESLLNMRVSKLIKKTLSQ-----PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGIC 207
D +S+ ++RV K K T+ + +G + ++ Y R+ V + +KG C
Sbjct: 146 DRDSVESVRVRKAKKLTVEELQALAAKGRKTATRYQQKSTSYERNIWVAELAKRLAKGQC 205
Query: 208 ENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
+ C K APF G PYLE HH+ LS GG DT +N + P +E +S
Sbjct: 206 QLCLKPAPFKNTKGEPYLETHHIAWLSKGGEDTAENTSRIVPQLPQENAHS 256
>UniRef100_C2U711 Putative uncharacterized protein n=1 Tax=Bacillus
cereus Rock1-3 RepID=C2U711_BACCE
Length = 72
Score = 59.7 bits (143), Expect = 3e-07
Identities = 26/47 (55%), Positives = 31/47 (65%)
Query: 210 CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
C ++APF GNPYLE HHV L+ G DT N V +C NCHR+LH
Sbjct: 2 CEQHAPFQDKKGNPYLEAHHVKWLAEDGEDTIYNTVGVCANCHRKLH 48
>UniRef100_Q0KFQ5 Predicted restriction endonuclease n=1
Tax=Ralstonia eutropha H16 RepID=Q0KFQ5_RALEH
Length = 371
Score = 58.9 bits (141), Expect = 5e-07
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN-PYLEVHHVIPLSSGG-----ADTTD 242
Y RDP+V A ++ ++ CE ++ F + N PY+E HH+IPLS D T
Sbjct: 251 YPRDPLVAAEAVKSAEYRCELFPEHQTFKSSSKNVPYVEAHHLIPLSRQADFQFSLDITA 310
Query: 243 NCVALCPNCHRELHY---SKNAKELIEMLYVNINRLQK 277
N +ALCP CH+ LH+ S+ L +L +RLQ+
Sbjct: 311 NIIALCPTCHQRLHHGHASERRSPLRRLLSQRKDRLQE 348
>UniRef100_A0YK66 Putative uncharacterized protein n=1 Tax=Lyngbya
sp. PCC 8106 RepID=A0YK66_9CYAN
Length = 245
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 174 EGSRKPVEVERLQ-KVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
+G E E +Q K R + + + KG C+ F +G+ Y E HH++P
Sbjct: 135 DGVLSTSETEEIQIKRVKRYQKITDQLKTKYKGCCQIKDCGFTFIQKNGDNYAEAHHLVP 194
Query: 233 LSSGGADTTDNCVALCPNCHRELHYS 258
LS GG+ N V LCPN HR HY+
Sbjct: 195 LSEGGSQDASNVVILCPNHHRMFHYA 220
>UniRef100_UPI000196C23B hypothetical protein BRYFOR_03279 n=1
Tax=Bryantella formatexigens DSM 14469
RepID=UPI000196C23B
Length = 380
Score = 55.8 bits (133), Expect = 4e-06
Identities = 44/161 (27%), Positives = 65/161 (40%), Gaps = 21/161 (13%)
Query: 124 ILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVE 183
++I SDS + ++ ++ D S K I + S +P
Sbjct: 219 VMITGAEAISDSIYQQLV-------NEADGDISPAEYAAEKYIPPAAERSVSSDRPATNP 271
Query: 184 RLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGA----- 238
RL K ++ K ++ + F DG PYLEVHH+IPL A
Sbjct: 272 RLGKAAIKRSGYKCIFSTDAE-------PHKTFLKPDGTPYLEVHHLIPLKQQPAFEYKL 324
Query: 239 DTTDNCVALCPNCHRELHYSKNA--KELIEMLYVNINRLQK 277
DT N + LCP CHR LH+ A E++ LY + + K
Sbjct: 325 DTMANLIPLCPLCHRRLHHGCRADVDEMLTQLYEERHEILK 365
>UniRef100_A3U4A6 E14 prophage-like protein n=1 Tax=Oceanicola
batsensis HTCC2597 RepID=A3U4A6_9RHOB
Length = 201
Score = 55.8 bits (133), Expect = 4e-06
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 161 RVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWI--LQQSKGICENCGKNAPFYL 218
R + I L Q + S + EV++ QKV + + L++ C+ G + F
Sbjct: 58 RTEEAIAADLFQDDSSSE--EVKKTQKVIETFERNRKAVRDLKRLYKTCQVTGDDFVFSK 115
Query: 219 NDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
+G PYLEVHH++PL GG+D N V + + HR LHY+
Sbjct: 116 VNGEPYLEVHHLVPLGEGGSDDPANLVVISAHIHRMLHYA 155
>UniRef100_Q81E47 5-methylcytosine-specific restriction enzyme A n=6
Tax=Bacillus cereus group RepID=Q81E47_BACCR
Length = 97
Score = 55.5 bits (132), Expect = 5e-06
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 182 VERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNP-YLEVHHVIPLS-----S 235
+E ++V+ RDP ++Q++ CE + F Y+E HH+IPL
Sbjct: 1 MESGREVWPRDPKKAKQAIKQAEFKCEIDDTHETFVSEASRKNYMEAHHLIPLRMQHDFE 60
Query: 236 GGADTTDNCVALCPNCHRELHY--SKNAKELIEMLY 269
D N V++CPNCHR +HY K+ K+++E+L+
Sbjct: 61 NSLDVVGNIVSICPNCHRLIHYGRDKDKKKVLELLF 96
>UniRef100_Q4ZJH6 Putative recombinase n=1 Tax=Listeria
monocytogenes RepID=Q4ZJH6_LISMO
Length = 284
Score = 55.1 bits (131), Expect = 7e-06
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 206 ICENCGKNAPFY-LNDGNPYLEVHHVIPLS-----SGGADTTDNCVALCPNCHRELHYSK 259
ICE ++ F + DG PY+E HH+IP++ D DN + LCP CHR++HY+
Sbjct: 187 ICEFNQEHKTFINIKDGKPYVEGHHLIPMAVQDYYDNTIDFADNIICLCPTCHRKIHYAV 246
Query: 260 NAKELIEMLYVNINRLQK 277
+ E EML N +K
Sbjct: 247 QS-EKKEMLIKIFNEREK 263
>UniRef100_B4BAD4 Putative uncharacterized protein n=1
Tax=Clostridium thermocellum DSM 4150 RepID=B4BAD4_CLOTM
Length = 367
Score = 55.1 bits (131), Expect = 7e-06
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN-PYLEVHHVIPLSSGGA-----DTTD 242
++R+P V L++++ CE + F N PY+E HH+IP+S+ D T
Sbjct: 253 FLRNPKVAIQALKKAQYKCEINDAHETFIAKSSNKPYVESHHLIPISNSAMFGFSIDITA 312
Query: 243 NCVALCPNCHRELHYSKN--AKELIEMLY 269
N +LCPNCHR +H + + +E++ LY
Sbjct: 313 NICSLCPNCHRAIHSATDEVKREMLTKLY 341
>UniRef100_Q723Z7 Conserved domain protein n=1 Tax=Listeria
monocytogenes str. 4b F2365 RepID=Q723Z7_LISMF
Length = 284
Score = 54.7 bits (130), Expect = 9e-06
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 206 ICENCGKNAPFY-LNDGNPYLEVHHVIPLS-----SGGADTTDNCVALCPNCHRELHYSK 259
+CE ++ F + DG PY+E HH+IP++ D DN + LCP CHR++HY+
Sbjct: 187 VCEFNQEHKTFINIKDGKPYVEGHHLIPMAVQDYYDNTIDFADNIICLCPTCHRKIHYAV 246
Query: 260 NAKELIEMLYVNINRLQK 277
+ E EML N +K
Sbjct: 247 QS-EKKEMLIKIFNEREK 263
>UniRef100_C0ZFI2 Putative uncharacterized protein n=1
Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFI2_BREBN
Length = 360
Score = 54.3 bits (129), Expect = 1e-05
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 8/61 (13%)
Query: 224 YLEVHHVIPLS-----SGGADTTDNCVALCPNCHRELHYSKNA--KELIEMLY-VNINRL 275
++E HH+IP+ S D N V+LCPNCHR++H++ + KELIE+LY INRL
Sbjct: 283 FVEAHHLIPMKLQALFSWSLDVPGNIVSLCPNCHRKIHHASKSERKELIEVLYSKKINRL 342
Query: 276 Q 276
+
Sbjct: 343 K 343
>UniRef100_B0ACA5 Putative uncharacterized protein n=1
Tax=Clostridium bartlettii DSM 16795 RepID=B0ACA5_9CLOT
Length = 305
Score = 54.3 bits (129), Expect = 1e-05
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 129 PGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKK-------TLSQPEGSRKPVE 181
P S+ I E+ + + +E+ + + I K T + ++
Sbjct: 128 PSKVSEELANYIKSNEIDMIKETLQEENNIEYDLKNYIDKINVDENFTYKYDKKKKQKYT 187
Query: 182 VERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNP-YLEVHHVIPLSSG---- 236
++ K Y+RD V L+++ CE ++ F + Y E HH++P++
Sbjct: 188 IQNGIKTYIRDRKVAMNALKKANHKCEVDSEHEVFLRRNVEVGYTESHHLVPMAYSDIFD 247
Query: 237 -GADTTDNCVALCPNCHRELHYSKNAKELIEMLYV-NINRLQK 277
D +N V+LC +CH LHY K + ++E LY +N L K
Sbjct: 248 VSLDVEENIVSLCSHCHNLLHYGKEFERVLEQLYYERVNHLNK 290
>UniRef100_Q8PRX6 5-methylcytosine-specific restriction enzyme A n=1
Tax=Methanosarcina mazei RepID=Q8PRX6_METMA
Length = 257
Score = 54.3 bits (129), Expect = 1e-05
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 20/140 (14%)
Query: 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQ 202
G + E P+++E L + + E + + R Y R+P+ + ++
Sbjct: 129 GLVDEKKFPSEEEELKSYSI-----------ENRKDGKIIMRYTTQYERNPINRRNAIRI 177
Query: 203 SKGICENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTTDNC----VALCPNCHRELHY 257
+C+ CG + Y G Y+EVHH+ PL GG N + +C NCHR +H
Sbjct: 178 HGTVCQGCGFDFEKVYGEIGKDYIEVHHIKPLYEGGGSVPINAETDLICVCANCHRMIHR 237
Query: 258 SK----NAKELIEMLYVNIN 273
K + KEL ++L N N
Sbjct: 238 RKDKVLSLKELQKLLLANKN 257
>UniRef100_B2Q7M1 HNH endonuclease n=1 Tax=Exiguobacterium sp. AT1b
RepID=B2Q7M1_9BACL
Length = 272
Score = 53.9 bits (128), Expect = 2e-05
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 165 LIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPY 224
++K+ L + GS + R Q++ R V IL ++ CE CG +PF DG Y
Sbjct: 158 IVKQNLQKVSGSSTAI---RKQQIRERSAAVYYSILARANNHCEACGSPSPFETEDG-AY 213
Query: 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEML 268
LE+H + S A+CPNCH LH K+ + E L
Sbjct: 214 LELHSLYSHSDQIILLPGLGAAVCPNCHMRLHKGKDRSQYNEQL 257
>UniRef100_A7Z277 Putative uncharacterized protein n=1 Tax=Bacillus
amyloliquefaciens FZB42 RepID=A7Z277_BACA2
Length = 388
Score = 52.8 bits (125), Expect = 3e-05
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 162 VSKLIKKT--LSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN 219
+S+ +KKT ++Q + +P+ + QK + R+ + + + S CE + F
Sbjct: 241 ISESVKKTYEVNQKKVRPEPIYNKGGQKQWTRNASLASMAMMLSNYTCEIEDSHKTFISK 300
Query: 220 DGN-PYLEVHHVIPLSSGGA-----DTTDNCVALCPNCHRELHYSKN 260
N P++E HH++P+S G D +N V+LCP CHR +H ++
Sbjct: 301 STNKPFVECHHLVPISKQGEFQYDLDQLENMVSLCPLCHRLIHLGRD 347
>UniRef100_B3CDE4 Putative uncharacterized protein n=1
Tax=Bacteroides intestinalis DSM 17393
RepID=B3CDE4_9BACE
Length = 261
Score = 52.4 bits (124), Expect = 4e-05
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EGS + V R Y R+P+ + +++ IC+ CG + + Y GN ++ VHH++P
Sbjct: 162 EGSLQQALVNR----YERNPIARKKCIEKHGCICQVCGMDFSKVYGELGNGFIHVHHIVP 217
Query: 233 LSS--GGA---DTTDNCVALCPNCHRELHYSK-NAKELIEML 268
+S+ G A + + V +CPNCH LH K + +EL ++L
Sbjct: 218 ISALKGEAHKIEPENGLVPVCPNCHAMLHKGKLSIEELRKIL 259
>UniRef100_UPI00006DCE53 hypothetical protein CdifQ_04003636 n=1
Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCE53
Length = 214
Score = 52.0 bits (123), Expect = 6e-05
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 13/130 (10%)
Query: 136 FWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMV 195
F A I L E+SQ ++ LN+ + +T + EG K V K Y R+P
Sbjct: 77 FTAEIEDDVLEEISQ----DNPLNINTINIELETEIRKEGKVKYV----YGKQYERNPRN 128
Query: 196 KAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTTDN----CVALCPN 250
+ ++ C CG + Y + G Y+E+HH+ PLSS G ++ N V +C N
Sbjct: 129 RIEAIKYHGTKCIVCGFDFEKTYGDRGKGYIEIHHIKPLSSVGEESNINPKTDLVPICSN 188
Query: 251 CHRELHYSKN 260
CHR +H K+
Sbjct: 189 CHRMIHRKKD 198
>UniRef100_Q64YP3 Putative uncharacterized protein n=1
Tax=Bacteroides fragilis RepID=Q64YP3_BACFR
Length = 216
Score = 51.6 bits (122), Expect = 8e-05
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PE +R ++ R + +R+ + + + +C+ CG + + Y EVHH+ P
Sbjct: 96 PEEAR---QIRREIEAILRNQKLVDELKIRYNNVCQICGTQIK--IGENKYYSEVHHIWP 150
Query: 233 LSS--GGADTTDNCVALCPNCHRELHYS--KNAKELIEMLYVNI 272
L G+DT DN V +CPNCH L Y KE+ ++L NI
Sbjct: 151 LGKPHNGSDTLDNMVCVCPNCHTLLDYKAIHLNKEIFKVLKHNI 194
>UniRef100_A6TVA6 HNH endonuclease n=1 Tax=Alkaliphilus
metalliredigens QYMF RepID=A6TVA6_ALKMQ
Length = 124
Score = 51.2 bits (121), Expect = 1e-04
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 164 KLIKKTLSQPEGSRKPVEVERLQKVY--VRDPMVKAWILQQSKGICENCGKNAPFYLNDG 221
K++ K +Q + R P +R + + +RD +KA L CE C +N +
Sbjct: 29 KVVTKRYNQYQ--RDPASNKRYGRSWKRIRDRYIKAHPL------CEECDRNGRIKAAE- 79
Query: 222 NPYLEVHHVIPLSSGGADTTDNCVALCPNCHREL 255
EVHH++PLS GG + T N +ALC +CH ++
Sbjct: 80 ----EVHHILPLSKGGGNETSNLMALCKSCHSKI 109
>UniRef100_C0QGN0 Putative 5-methylcytosine-specific restriction
enzyme A n=1 Tax=Desulfobacterium autotrophicum HRM2
RepID=C0QGN0_DESAH
Length = 375
Score = 51.2 bits (121), Expect = 1e-04
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EG+++ V + + Y RD + ++ C+ CG + Y G Y+ VHH+IP
Sbjct: 275 EGAKQTVTINK----YERDHNARKACIEYHGYNCKVCGFDFEKTYGELGRNYIHVHHLIP 330
Query: 233 LSSGGADTTDN----CVALCPNCHRELHYSKNAKELIEM 267
LS G + + N + +CPNCH LH S+N +L +
Sbjct: 331 LSKIGKEYSINPQTDLIPVCPNCHAMLHKSENPNDLYSL 369
>UniRef100_Q3EYN0 HNH endonuclease family protein n=1 Tax=Bacillus
thuringiensis serovar israelensis ATCC 35646
RepID=Q3EYN0_BACTI
Length = 422
Score = 50.8 bits (120), Expect = 1e-04
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 140 IIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPE--------GSRKPVEVERLQKVYVR 191
++ GE Q ++DE L + + + + K ++ + G +V+ + V
Sbjct: 214 VVEGEEKPEVQLSNDEVLAILEMGEALDKEINPDDFGSMGDMFGEVTHQDVKNRKPV--- 270
Query: 192 DPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNC 251
DP++K L + C CG +L+ + HH++P+ +GG DT N + LC +C
Sbjct: 271 DPIIKQQTLARDDYRCRCCGTGGKAFLST----IIFHHIVPVHAGGPDTVANGLTLCDSC 326
Query: 252 HRELH 256
H LH
Sbjct: 327 HITLH 331
>UniRef100_Q2BBA0 Putative uncharacterized protein n=1 Tax=Bacillus
sp. NRRL B-14911 RepID=Q2BBA0_9BACI
Length = 339
Score = 50.8 bits (120), Expect = 1e-04
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 171 SQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHH 229
S EG RK V V VY R+P+ + ++ C+ C N Y G ++ VHH
Sbjct: 232 SLEEGKRKSVTVN----VYERNPIARKLCIEHYGLQCQVCNLNFEDTYGGVGKDFIHVHH 287
Query: 230 VIPLSSGGADTTDN----CVALCPNCHRELHYSKNAKELIEMLYVNINRLQ 276
+IPL D N + +CPNCH LH +N +Y+++ +L+
Sbjct: 288 IIPLYEIQQDYEVNPILDLIPVCPNCHAMLHRKENG------IYLSVEQLK 332
>UniRef100_C3GU40 HNH endonuclease n=2 Tax=Bacillus thuringiensis
RepID=C3GU40_BACTU
Length = 622
Score = 50.8 bits (120), Expect = 1e-04
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 140 IIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPE--------GSRKPVEVERLQKVYVR 191
++ GE Q ++DE L + + + + K ++ + G +V+ + V
Sbjct: 414 VVEGEEKPEVQLSNDEVLAILEMGEALDKEINPDDFGSMGDMFGEVTHQDVKNRKPV--- 470
Query: 192 DPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNC 251
DP++K L + C CG +L+ + HH++P+ +GG DT N + LC +C
Sbjct: 471 DPIIKQQTLARDDYRCRCCGTGGKAFLST----IIFHHIVPVHAGGPDTVANGLTLCDSC 526
Query: 252 HRELH 256
H LH
Sbjct: 527 HITLH 531
>UniRef100_C2HHV6 Bacteriophage endonuclease n=1 Tax=Finegoldia
magna ATCC 53516 RepID=C2HHV6_PEPMA
Length = 132
Score = 50.8 bits (120), Expect = 1e-04
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 181 EVERLQKVYVRDPMV-----KAWILQQSKGI-----CENCGKNAPFYLNDGNPYLEVHHV 230
E R + Y RDP K W + + + + CE C K N EVHH+
Sbjct: 43 EYNRNYEKYKRDPKTHKRYGKTWRIIRKRYVAEHPLCEMCLKE-----NRMTKVEEVHHI 97
Query: 231 IPLSSGGADTTDNCVALCPNCHRELH 256
+PLS GG + DN ++LC +CH ++H
Sbjct: 98 LPLSRGGTNNEDNLMSLCKSCHSKIH 123
>UniRef100_Q6MJA3 Putative membrane protein n=1 Tax=Bdellovibrio
bacteriovorus RepID=Q6MJA3_BDEBA
Length = 140
Score = 50.4 bits (119), Expect = 2e-04
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 176 SRKPVEVERLQKVYVRDPMVKAWILQQ-SKGICENCGKNAPFYLNDGNPYLEVHHVIPLS 234
S P E ++ +K R+ W Q+ KG+C +CGK F D L + H+IP++
Sbjct: 34 SAAPPEHQKREKAKARELRQSQWWKQELGKGLCYHCGKR--FKPAD----LTMDHLIPIA 87
Query: 235 SGGADTTDNCVALCPNCHRELHYSKNAKELIEML 268
GG +NCV C +C+ + Y A+ +E L
Sbjct: 88 RGGKSNKNNCVPSCKDCNSKKGYKTRAEMALEEL 121
>UniRef100_B8KVR3 HNH endonuclease domain protein n=1 Tax=gamma
proteobacterium NOR51-B RepID=B8KVR3_9GAMM
Length = 289
Score = 50.4 bits (119), Expect = 2e-04
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 167 KKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICE-NCGKNAPFYLNDGNPYL 225
+K ++ PE + P E ++ Y R V L+ + CE + P G P +
Sbjct: 158 QKLVAAPEDAVVPKEYRAMR--YERSAAVGREALESAGYACEFDNTHETPLSAVTGQPIM 215
Query: 226 EVHHVIPLSSGGA-----DTTDNCVALCPNCHRELHYS 258
EVHH++P+S D N V+LCPNCH +H S
Sbjct: 216 EVHHLVPISKSAEFRCSLDVLANVVSLCPNCHSAIHRS 253
>UniRef100_B5G9G0 HNH endonuclease n=1 Tax=Streptomyces sp. SPB74
RepID=B5G9G0_9ACTO
Length = 272
Score = 50.4 bits (119), Expect = 2e-04
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 197 AWILQQSKGI-CENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTT--DNCVALCPNCH 252
A +L+Q + CE CG + FY G+ Y+E HHV+PL G TT + +C NCH
Sbjct: 171 ASVLKQGGALSCEACGFDFGKFYGERGDGYIECHHVVPLHEAGEGTTRLADLALICSNCH 230
Query: 253 RELHYSKNAKELIEMLYVNINR 274
R +H S E+ V ++R
Sbjct: 231 RMIHRSAPWPTPAELRLVVLDR 252
>UniRef100_Q39IU3 Putative uncharacterized protein n=1
Tax=Burkholderia sp. 383 RepID=Q39IU3_BURS3
Length = 122
Score = 50.1 bits (118), Expect = 2e-04
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNC 251
+L +++ CE CG A + DG P+L+ HH+ L+ +DT N ++CPNC
Sbjct: 23 LLDRAETTCEACGHPATYSGADGFPFLDTHHLRKLTDSESDTVTNAFSVCPNC 75
>UniRef100_B1ZSH9 Restriction endonuclease-like protein n=1
Tax=Opitutus terrae PB90-1 RepID=B1ZSH9_OPITP
Length = 261
Score = 50.1 bits (118), Expect = 2e-04
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 165 LIKKTLSQPEGSRKP----VEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAP-FYLN 219
L++ +PEG +P V ++RL+ DP + ++ +C+ CG Y
Sbjct: 139 LVRGDFEEPEGFFRPGVATVVIDRLE----HDPFARRACIEHYGSVCQACGMRFDKVYGK 194
Query: 220 DGNPYLEVHHVIPLSS--GGADTTDNCVALCPNCHRELHYSKNAKELIEM 267
G ++EVH + P+S AD + LC NCHR +H A + E+
Sbjct: 195 IGAGFIEVHRLRPVSRPVDSADPVKELIPLCSNCHRMIHRRSPALSVAEL 244
>UniRef100_A3WFM1 5-methylcytosine-specific restriction enzyme A n=1
Tax=Erythrobacter sp. NAP1 RepID=A3WFM1_9SPHN
Length = 288
Score = 49.7 bits (117), Expect = 3e-04
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 28/146 (19%)
Query: 136 FWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGS----------------RKP 179
FW RG+ L Q TD + + ++ K L+ +G + P
Sbjct: 114 FWGVFERGDDIWLFQATD------VFMDRIRKHGLASEDGGSILEPEVDDYQSEINQKAP 167
Query: 180 VEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPF-YLNDGNPYLEVHHVIPLSSG-- 236
++ QK + RDP V A L+ + CE + F + G P++E HH+IP+ +
Sbjct: 168 SQITSTQKAWSRDPKVAAEALKNASFECELYPELPTFTSRSTGYPFMEAHHLIPMKAQAD 227
Query: 237 ---GADTTDNCVALCPNCHRELHYSK 259
D DN L P HR+LH ++
Sbjct: 228 FDVSLDVVDNICCLSPFAHRKLHMAE 253
>UniRef100_UPI0001A457FB hypothetical protein NEISUBOT_00645 n=1
Tax=Neisseria subflava NJ9703 RepID=UPI0001A457FB
Length = 255
Score = 49.3 bits (116), Expect = 4e-04
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EGS + V V R Y RDP + L++ C C N FY G ++ VHH+ P
Sbjct: 150 EGSVQQVMVNR----YERDPKAREACLKKYGYNCSVCNFNFEDFYGEIGKNFIHVHHLTP 205
Query: 233 LSSGGADTTD---NCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
+S+ G T+ + +CPNCH LH N + IE L + I ++QK
Sbjct: 206 VSNNGERYTNPEKDLRPVCPNCHAMLH-KTNRPQRIEDLKLLI-KMQK 251
>UniRef100_Q3IBU7 Putative HNH endonuclease n=1
Tax=Pseudoalteromonas haloplanktis TAC125
RepID=Q3IBU7_PSEHT
Length = 420
Score = 49.3 bits (116), Expect = 4e-04
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VKA++LQ+ C++ K N L VHH + S GG D N +ALC CH +
Sbjct: 184 VKAYVLQRDNYKCQSGRKTKH------NAKLHVHHKVFRSQGGTDALSNLIALCETCHND 237
Query: 255 LHYSK 259
LH K
Sbjct: 238 LHVGK 242
>UniRef100_UPI00016600C4 HNH endonuclease n=1 Tax=Klebsiella
pneumoniae NTUH-K2044 RepID=UPI00016600C4
Length = 304
Score = 48.5 bits (114), Expect = 6e-04
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 189 YVRDPMVKAWILQQSKGICE-NCGKNAPFYLNDGNP--YLEVHHVIPLSS-----GGADT 240
Y R V L ++ CE NC + P + +P Y E HH++P+S D
Sbjct: 190 YPRSKSVSKNALNKADYKCEINC--DHPTFRRRNSPLNYTEPHHIVPMSKQDYFENSLDV 247
Query: 241 TDNCVALCPNCHRELHYSKNAKELIEMLY 269
+N ++LC NCH+++H K ++++ +Y
Sbjct: 248 EENIISLCCNCHKQIHLGKGFEDMLRKIY 276
>UniRef100_Q65MN2 McrA n=1 Tax=Bacillus licheniformis ATCC 14580
RepID=Q65MN2_BACLD
Length = 140
Score = 48.5 bits (114), Expect = 6e-04
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 170 LSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN-PYLEVH 228
+SQ +P+ + Q+ + R+ + + + S CE + F N PY+E H
Sbjct: 5 VSQKRKRPQPIINQGGQRHWTRNASLASKAMMLSNYTCEIDHTHRTFISKSTNMPYVECH 64
Query: 229 HVIPLSSGGA-----DTTDNCVALCPNCHRELHYSKN--AKELIEMLY 269
H++P++ D N V+LCP+CHR +HY ++ +++++ LY
Sbjct: 65 HLVPIAKQEGFKYDLDQLANLVSLCPHCHRLIHYGQDEEKEKMLKKLY 112
>UniRef100_Q3ZAC8 HNH endonuclease domain protein n=1
Tax=Dehalococcoides ethenogenes 195 RepID=Q3ZAC8_DEHE1
Length = 118
Score = 48.5 bits (114), Expect = 6e-04
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 164 KLIKKTLSQPEGSRKPVEVERLQKVY--VRDPMVKAWILQQSKGICENCGKNAPFYLNDG 221
K++ K +Q E R P +R + + +RD +K L CE C K
Sbjct: 29 KVVDKQYNQYE--RDPKSNKRYGRSWKRIRDRYIKLHPL------CEECDKQGKL----- 75
Query: 222 NPYLEVHHVIPLSSGGADTTDNCVALCPNCHREL 255
P EVHH++PLS GG++ N +ALC +CH +
Sbjct: 76 TPAEEVHHILPLSKGGSNEKSNLMALCKSCHSRI 109
>UniRef100_B3EB35 HNH endonuclease n=1 Tax=Geobacter lovleyi SZ
RepID=B3EB35_GEOLS
Length = 281
Score = 48.5 bits (114), Expect = 6e-04
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVI 231
PEG+ V V + Y R P+ +A + +C CG + Y G Y+EVHH I
Sbjct: 177 PEGACIKVIVNK----YERSPVNRAVCIAVYGTVCHVCGFDFGKVYGQIGKGYIEVHHRI 232
Query: 232 PLSSGGA----DTTDNCVALCPNCHRELHYSKNAKEL 264
P+S GA D + V LC NCH +H + EL
Sbjct: 233 PVSKMGASYVIDPIRDLVPLCSNCHSAVHRTDPPVEL 269
>UniRef100_Q6U5M9 Hnh n=1 Tax=Klebsiella pneumoniae
RepID=Q6U5M9_KLEPN
Length = 304
Score = 48.5 bits (114), Expect = 6e-04
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 189 YVRDPMVKAWILQQSKGICE-NCGKNAPFYLNDGNP--YLEVHHVIPLSS-----GGADT 240
Y R V L ++ CE NC + P + +P Y E HH++P+S D
Sbjct: 190 YPRSKSVSKNALNKADYKCEINC--DHPTFRRRNSPLNYTEPHHIVPMSKQDYFENSLDV 247
Query: 241 TDNCVALCPNCHRELHYSKNAKELIEMLY 269
+N ++LC NCH+++H K ++++ +Y
Sbjct: 248 EENIISLCCNCHKQIHLGKGFEDMLRKIY 276
>UniRef100_B3X2L2 Hnh n=1 Tax=Shigella dysenteriae 1012
RepID=B3X2L2_SHIDY
Length = 302
Score = 48.5 bits (114), Expect = 6e-04
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 189 YVRDPMVKAWILQQSKGICE-NCGKNAPFYLNDGNP--YLEVHHVIPLSS-----GGADT 240
Y R V L ++ CE NC + P + +P Y E HH++P+S D
Sbjct: 188 YPRSKSVSKNALNKADYKCEINC--DHPTFRRRNSPLNYTEPHHIVPMSKQDYFENSLDV 245
Query: 241 TDNCVALCPNCHRELHYSKNAKELIEMLY 269
+N ++LC NCH+++H K ++++ +Y
Sbjct: 246 EENIISLCCNCHKQIHLGKGFEDMLRKIY 274
>UniRef100_Q8DMK2 Maturase; reverse transcriptase n=1
Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DMK2_THEEB
Length = 562
Score = 48.1 bits (113), Expect = 8e-04
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PE + E ++L++ + ++ + ++ GIC CG + + E+HH++P
Sbjct: 469 PEWAEYFEERKKLKEAPAQYRRIRRELWKKQGGICPVCGGEI-----EQDMLTEIHHILP 523
Query: 233 LSSGGADTTDNCVALCPNCHRELH 256
GG+D DN V + NCH+++H
Sbjct: 524 KHKGGSDDLDNLVLIHANCHKQVH 547
>UniRef100_C1MEX8 HNH endonuclease n=1 Tax=Citrobacter sp. 30_2
RepID=C1MEX8_9ENTR
Length = 304
Score = 48.1 bits (113), Expect = 8e-04
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 202 QSKGICENCGKNAPFYL------------NDGNPYLEVHHVIPLSSGGA-----DTTDNC 244
+SKG+ +N A + N Y E HH++P+S A D +N
Sbjct: 192 RSKGVSQNALNKAGYRCEVDSDHPTFRRRNSSLNYTEPHHIVPMSRQDAFDTSLDVEENI 251
Query: 245 VALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
++LC NCH+++H + +++++ +Y RL K
Sbjct: 252 ISLCCNCHKQIHLGQGYEDMLKEIYTARKRLLK 284
>UniRef100_Q3Z7J0 HNH endonuclease domain protein n=1
Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z7J0_DEHE1
Length = 115
Score = 47.8 bits (112), Expect = 0.001
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 206 ICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSK 259
+CE C K + + EVHH+IPL+ GG + N ++LC +CH ++H+ +
Sbjct: 64 LCEQCLKAGRYVAVE-----EVHHIIPLADGGTNEESNLMSLCRSCHEKIHHER 112
>UniRef100_Q5YRW6 Putative endonuclease n=1 Tax=Nocardia farcinica
RepID=Q5YRW6_NOCFA
Length = 123
Score = 47.4 bits (111), Expect = 0.001
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 203 SKGICENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTT--DNCVALCPNCHRELHYSK 259
S+ CE CG + Y G Y+E HH++PL G T + V LC NCHR +H+
Sbjct: 35 SRVFCEVCGFDFEAVYGERGAGYIECHHIVPLHVSGETVTKLSDLVLLCSNCHRMIHHGS 94
Query: 260 ---NAKELIEMLYVN 271
+ +EL E++ V+
Sbjct: 95 RWLSPEELREVVQVS 109
>UniRef100_Q6EME6 Hnh endonuclease n=1 Tax=Escherichia coli
RepID=Q6EME6_ECOLX
Length = 302
Score = 47.4 bits (111), Expect = 0.001
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 189 YVRDPMVKAWILQQSKGICE-NCGKNAPFYLNDGNP--YLEVHHVIPLSS-----GGADT 240
Y R V L ++ C+ NC + P + +P Y E HH++P+S D
Sbjct: 188 YPRSKSVSKNALNKADYKCQINC--DHPTFRRRNSPLNYTEPHHIVPMSKQDYFENSLDV 245
Query: 241 TDNCVALCPNCHRELHYSKNAKELIEMLY 269
+N ++LC NCH+++H K ++++ +Y
Sbjct: 246 EENIISLCCNCHKQIHLGKGFEDMLRKIY 274
>UniRef100_A1F1U9 HNH endonuclease domain protein n=1 Tax=Vibrio
cholerae 2740-80 RepID=A1F1U9_VIBCH
Length = 210
Score = 47.4 bits (111), Expect = 0.001
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 168 KTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEV 227
K P G+++P +RD + + C+ CG L +G Y E
Sbjct: 86 KAADLPTGTKEPEREYTTTYRVLRDTNLARKLKLLYNNSCQICGLQ--IQLPNGKLYSEA 143
Query: 228 HHVIPLSSG--GADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
HH+IPL + G+DT +N + LCPN H Y L E+ V+ + + +
Sbjct: 144 HHIIPLGNPHHGSDTPENIIVLCPNHHVMCDYGAIELSLKEVKQVSSHSISQ 195
>UniRef100_Q2FQI6 HNH endonuclease n=1 Tax=Methanospirillum hungatei
JF-1 RepID=Q2FQI6_METHJ
Length = 163
Score = 47.4 bits (111), Expect = 0.001
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 194 MVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
+++ IL++ C+ CG+ L VHH+IPLS GG T N LC +CH+
Sbjct: 61 VIRRQILERDGYRCQICGEQRD---------LSVHHIIPLSEGGDSTASNLRVLCHSCHQ 111
Query: 254 ELHYSKNAKE 263
+ H + ++
Sbjct: 112 QAHGKRAVRD 121
>UniRef100_Q8DMT0 Reverse transcriptase n=1 Tax=Thermosynechococcus
elongatus BP-1 RepID=Q8DMT0_THEEB
Length = 564
Score = 47.0 bits (110), Expect = 0.002
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PE + + ++L+K + ++ + ++ GIC CG + + ++HH++P
Sbjct: 471 PEWAEYFEKRKKLKKAPAQYRRIRRELWKKQGGICPVCGGEI-----EQDMLTDIHHILP 525
Query: 233 LSSGGADTTDNCVALCPNCHRELH 256
GG+D DN V + NCH+++H
Sbjct: 526 KHKGGSDDLDNLVLIHANCHKQVH 549
>UniRef100_Q8DJR1 Reverse transcriptase n=1 Tax=Thermosynechococcus
elongatus BP-1 RepID=Q8DJR1_THEEB
Length = 564
Score = 47.0 bits (110), Expect = 0.002
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PE + + ++L+K + ++ + ++ GIC CG + + ++HH++P
Sbjct: 471 PEWAEYFEKRKKLKKAPAQYRRIRRELWKKQGGICPVCGGEI-----EQDMLTDIHHILP 525
Query: 233 LSSGGADTTDNCVALCPNCHRELH 256
GG+D DN V + NCH+++H
Sbjct: 526 KHKGGSDDLDNLVLIHANCHKQVH 549
>UniRef100_Q8CM00 Reverse transcriptase n=1 Tax=Thermosynechococcus
elongatus BP-1 RepID=Q8CM00_THEEB
Length = 564
Score = 47.0 bits (110), Expect = 0.002
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PE + + ++L+K + ++ + ++ GIC CG + + ++HH++P
Sbjct: 471 PEWAEYFEKRKKLKKAPAQYRRIRRELWKKQGGICPVCGGEI-----EQDMLTDIHHILP 525
Query: 233 LSSGGADTTDNCVALCPNCHRELH 256
GG+D DN V + NCH+++H
Sbjct: 526 KHKGGSDDLDNLVLIHANCHKQVH 549
>UniRef100_Q0HF94 Putative uncharacterized protein n=1
Tax=Shewanella sp. MR-4 RepID=Q0HF94_SHESM
Length = 295
Score = 46.6 bits (109), Expect = 0.002
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 219 NDGNPYLEVHHVIPLSSG-----GADTTDNCVALCPNCHRELHYSKNAK--ELIEMLY-V 270
+ G ++E HH++P++ D N V LCPNCHR +HY+++ EL+ Y
Sbjct: 213 SSGKAFVEAHHLVPVAKSPDFDVSLDVEPNIVVLCPNCHRAIHYAESQYKIELLTRFYNQ 272
Query: 271 NINRLQK 277
IN L++
Sbjct: 273 RINELRQ 279
>UniRef100_A0L1U4 HNH endonuclease n=1 Tax=Shewanella sp. ANA-3
RepID=A0L1U4_SHESA
Length = 224
Score = 46.6 bits (109), Expect = 0.002
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EGS K V V + Y RD + + C+ CG N + Y G ++EVHH+ P
Sbjct: 123 EGSVKRVLVNK----YERDAKARKACIAHHGCQCKVCGFNFSETYGLHGEGFIEVHHITP 178
Query: 233 LS----SGGADTTDNCVALCPNCHRELHYSKNAKELIEM 267
LS S D ++ + +C NCH LH K + E+
Sbjct: 179 LSTISKSYQVDPINDLIPVCSNCHSMLHRGKEPLSIDEL 217
>UniRef100_Q4C8B3 HNH endonuclease n=1 Tax=Crocosphaera watsonii WH
8501 RepID=Q4C8B3_CROWT
Length = 214
Score = 46.6 bits (109), Expect = 0.002
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 16/108 (14%)
Query: 163 SKLIKKTLSQPEGSRKPVEVE-----RLQKVYVRDPMVKAWILQQSKGICENCGKNAPFY 217
+++ + TL +PE S P++ + + Y P + +L++ KGIC C ++ F
Sbjct: 96 TEIKRHTLVKPESS--PLDGNWTYGRKRRGTYTGTPTRVSKLLKKQKGICPQCKQH--FT 151
Query: 218 LNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELI 265
D +EV H+IP S GG DT +N AL HR HY K+ + +
Sbjct: 152 PED---LIEVDHIIPKSKGGKDTYNNLQAL----HRHCHYVKSKNDYL 192
>UniRef100_C3G8U4 HNH endonuclease n=1 Tax=Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1 RepID=C3G8U4_BACTU
Length = 258
Score = 46.6 bits (109), Expect = 0.002
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 166 IKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPY 224
+ + LS EG+RK V V + Y R + + ++ C C + Y + G +
Sbjct: 147 VPEQLSIMEGNRKTVVVNQ----YERSAVARRKCIEHHGCYCHVCHLDFKKQYGSLGKGF 202
Query: 225 LEVHHVIPLSSGG----ADTTDNCVALCPNCHRELH-YSKNAKEL-IEMLYVNINR 274
+ VHH IPLS G D ++ + +CPNCH LH S N L IE L V +N+
Sbjct: 203 IHVHHKIPLSEIGDEYEVDYVNDLIPVCPNCHAMLHRKSMNGSFLTIEELKVLMNK 258
>UniRef100_Q8SDH4 Putative uncharacterized protein n=1
Tax=Lactobacillus phage LL-H RepID=Q8SDH4_BPLLH
Length = 112
Score = 46.6 bits (109), Expect = 0.002
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 15/84 (17%)
Query: 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
P+G R + + +++YVRD KGIC CGK+ F N + H+ P
Sbjct: 26 PKGQRPKISKAKRKRIYVRD-----------KGICAYCGKHLEFKPNG----FHIDHIKP 70
Query: 233 LSSGGADTTDNCVALCPNCHRELH 256
L+ GG + N C C+ H
Sbjct: 71 LAKGGNNEDSNLTVSCRECNLSKH 94
>UniRef100_Q46AN8 Putative uncharacterized protein n=1
Tax=Methanosarcina barkeri str. Fusaro
RepID=Q46AN8_METBF
Length = 268
Score = 46.6 bits (109), Expect = 0.002
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD--NCVALCPNCHRELHYSKNAKEL 264
C CG F +G Y EVHH+I L+ +T N + +CP CHR+LHY+ E
Sbjct: 193 CMICGYPG-FLKKNGEKYAEVHHMIELNQKAPETLQSWNLLVVCPLCHRKLHYADVKSEF 251
Query: 265 IE 266
++
Sbjct: 252 LD 253
>UniRef100_Q0RPY1 Tellurium resistance protein terE n=1 Tax=Frankia
alni ACN14a RepID=Q0RPY1_FRAAA
Length = 644
Score = 46.2 bits (108), Expect = 0.003
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
VKA + ++ G+C CG G +LE HVIP S GGA + +N LC C+R
Sbjct: 589 VKAEVWRRDGGVCVECG---------GGEHLEFDHVIPFSRGGASSVNNLQLLCRRCNR 638
>UniRef100_B0K6Q9 HNH endonuclease n=1 Tax=Thermoanaerobacter sp.
X514 RepID=B0K6Q9_THEPX
Length = 119
Score = 46.2 bits (108), Expect = 0.003
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 18/90 (20%)
Query: 173 PEGSRKPVEVERLQKVYVRDPMVK-----AWILQQSKGI-----CENCGKNAPFYLNDGN 222
PE ++K E R +K Y RDP + AW + + I CE C +
Sbjct: 24 PEHAKK--EASRYEK-YQRDPETRKRYGRAWKRIRDRYITAHPLCEECKRQGKL-----T 75
Query: 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P EVHH++PL+ GG N +ALC CH
Sbjct: 76 PATEVHHILPLARGGTHDESNLMALCTPCH 105
>UniRef100_B4D4V1 HNH endonuclease n=1 Tax=Chthoniobacter flavus
Ellin428 RepID=B4D4V1_9BACT
Length = 212
Score = 46.2 bits (108), Expect = 0.003
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 170 LSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHH 229
+SQP S+ ++R+ ++ +RD + + + IC+ CG Y E HH
Sbjct: 90 ISQP--SQPDRVLQRISRI-IRDTAISSELKLLYDHICQLCGTQLVVC---DRLYSEAHH 143
Query: 230 VIPLSS--GGADTTDNCVALCPNCHRELHYS 258
+ PL G+DT DN + +CPNCH L Y+
Sbjct: 144 IRPLGRPHDGSDTRDNLLCVCPNCHVLLDYA 174
>UniRef100_A0ZAT3 Putative uncharacterized protein n=1 Tax=Nodularia
spumigena CCY 9414 RepID=A0ZAT3_NODSP
Length = 394
Score = 46.2 bits (108), Expect = 0.003
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 206 ICENCGKNAPFYLNDGNPYLEVHHVIPLSS-----GGADTTDNCVALCPNCHRELH 256
+C+ C N + LE+HH++PLSS G + ++ V LCPNCHR +H
Sbjct: 305 VCDMCSCNTRHRYPWTDNLLEIHHLLPLSSAITVTGEGTSLEDVVGLCPNCHRSVH 360
>UniRef100_Q8TKB6 Hnh endonuclease n=1 Tax=Methanosarcina
acetivorans RepID=Q8TKB6_METAC
Length = 279
Score = 46.2 bits (108), Expect = 0.003
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 206 ICENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTTDNC----VALCPNCHRELHYSKN 260
+C+ CG + Y G Y+EVHHV PL N + +C NCHR +H K+
Sbjct: 203 VCQGCGFDFEKTYGEIGRDYIEVHHVKPLCEEEGSVPINAETDLICVCANCHRMIHRRKD 262
Query: 261 A----KELIEMLYVN 271
+ KEL E+L N
Sbjct: 263 SVLSLKELQELLLAN 277
>UniRef100_Q4C974 RNA-directed DNA polymerase n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4C974_CROWT
Length = 594
Score = 45.8 bits (107), Expect = 0.004
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
+Y PM + +L++ KGIC C ++ F +D +EV H+IP S GG D DN AL
Sbjct: 504 IYTGTPMRVSKLLKKQKGICPICKQH--FTPDD---LIEVDHIIPKSKGGKDRYDNLQAL 558
Query: 248 CPNCH 252
+CH
Sbjct: 559 HRHCH 563
>UniRef100_Q4C783 RNA-directed DNA polymerase (Reverse
transcriptase):HNH endonuclease n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4C783_CROWT
Length = 536
Score = 45.8 bits (107), Expect = 0.004
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
+Y PM + +L++ KGIC C ++ F +D +EV H+IP S GG D DN AL
Sbjct: 446 IYTGTPMRVSKLLKKQKGICPICKQH--FTPDD---LIEVDHIIPKSKGGKDRYDNLQAL 500
Query: 248 CPNCH 252
+CH
Sbjct: 501 HRHCH 505
>UniRef100_Q4C6E0 HNH endonuclease n=1 Tax=Crocosphaera watsonii WH
8501 RepID=Q4C6E0_CROWT
Length = 165
Score = 45.8 bits (107), Expect = 0.004
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
+Y PM + +L++ KGIC C ++ F +D +EV H+IP S GG D DN AL
Sbjct: 75 IYTGTPMRVSKLLKKQKGICPICKQH--FTPDD---LIEVDHIIPKSKGGKDRYDNLQAL 129
Query: 248 CPNCH 252
+CH
Sbjct: 130 HRHCH 134
>UniRef100_C3RB64 Predicted protein n=1 Tax=Bacteroides sp. D4
RepID=C3RB64_9BACE
Length = 274
Score = 45.8 bits (107), Expect = 0.004
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 16/114 (14%)
Query: 170 LSQPEGSRKPVEVE-RLQKV----YVRDPMVKAWILQQSKGICENCGKNAPFYLND-GNP 223
+S+ E +K V+ E +Q++ Y R+P+ + L + C CG N D G
Sbjct: 160 ISEEEFLQKAVQTEGTIQEIKSIRYERNPINRKLCLYKKGYTCAVCGMNFQDVYGDIGKG 219
Query: 224 YLEVHHVIPLSSGG----ADTTDNCVALCPNCHRELH-----YS-KNAKELIEM 267
++EVHH P+S G D + V LC NCH H YS + KE+I++
Sbjct: 220 FIEVHHTTPVSKMGEGYNLDIERDLVPLCSNCHSMTHRRNPPYSVEELKEIIKL 273
>UniRef100_B2Q9N3 HNH endonuclease n=1 Tax=Exiguobacterium sp. AT1b
RepID=B2Q9N3_9BACL
Length = 346
Score = 45.8 bits (107), Expect = 0.004
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 141 IRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWIL 200
+ GEL + D+ L + + ++L EG RK V V Y R+P+ + +
Sbjct: 204 LMGELKDYITSFFDKDLTAEYYADEVAESLE--EGKRKVVTVN----TYERNPLARKRCM 257
Query: 201 QQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLSSGG----ADTTDNCVALCPNCHREL 255
+ C+ C N Y G ++ VHH+ PL G D + +CPNCH L
Sbjct: 258 EYYGVSCQVCQINFEKIYGEVGRDFIHVHHIKPLHEIGQNYVVDPITDLRPVCPNCHAML 317
Query: 256 HYSKNAKEL-IEML 268
H + + L IE L
Sbjct: 318 HRKEGGEYLTIEQL 331
>UniRef100_Q8DL77 Reverse transcriptase n=1 Tax=Thermosynechococcus
elongatus BP-1 RepID=Q8DL77_THEEB
Length = 562
Score = 45.4 bits (106), Expect = 0.005
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PE + + ++L++ + + + ++ GIC CG + + E+HH++P
Sbjct: 469 PEWAEYFEQRKKLKEAPAQYRRTRRELWKKQGGICPVCGGEI-----EQDMLTEIHHILP 523
Query: 233 LSSGGADTTDNCVALCPNCHRELH 256
GG D DN V + NCH+++H
Sbjct: 524 KHKGGTDDLDNLVLIHTNCHKQVH 547
>UniRef100_Q8DK67 Reverse transcriptase n=1 Tax=Thermosynechococcus
elongatus BP-1 RepID=Q8DK67_THEEB
Length = 317
Score = 45.4 bits (106), Expect = 0.005
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PE + + ++L++ + + + ++ GIC CG + + E+HH++P
Sbjct: 224 PEWAEYFEQRKKLKEAPAQYRRTRRELWKKQGGICPVCGGEI-----EQDMLTEIHHILP 278
Query: 233 LSSGGADTTDNCVALCPNCHRELH 256
GG D DN V + NCH+++H
Sbjct: 279 KHKGGTDDLDNLVLIHTNCHKQVH 302
>UniRef100_B8I839 HNH endonuclease n=1 Tax=Clostridium
cellulolyticum H10 RepID=B8I839_CLOCE
Length = 119
Score = 45.4 bits (106), Expect = 0.005
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVK-----AWILQQSKGI-----CENCGKNAPFYLNDGNP 223
E S+K E R +K Y RDP + AW + + I CE C + P
Sbjct: 25 EHSKK--EAARYEK-YQRDPATRKRYGRAWKRIRDRYIAAHPLCEECKRQEKL-----TP 76
Query: 224 YLEVHHVIPLSSGGADTTDNCVALCPNCH 252
EVHH++PLS GG N +ALC CH
Sbjct: 77 AAEVHHILPLSRGGTHDRSNLMALCTPCH 105
>UniRef100_B8I0D2 HNH endonuclease n=1 Tax=Clostridium
cellulolyticum H10 RepID=B8I0D2_CLOCE
Length = 177
Score = 45.4 bits (106), Expect = 0.005
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 199 ILQQSKGICENCGKNAPFYLNDG-----NPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
IL + C+ CG A + G L+VHH+I +S GG D +N + +C +CH
Sbjct: 93 ILCRDNFTCKECGLFAAYKNKHGLFVPIAVGLDVHHLIQVSEGGTDQQNNLITICNDCHN 152
Query: 254 ELH--YSKNAKELIE 266
++H S + K L++
Sbjct: 153 QIHGIRSNSKKNLVK 167
>UniRef100_A4T2Q8 HNH endonuclease n=1 Tax=Mycobacterium gilvum
PYR-GCK RepID=A4T2Q8_MYCGI
Length = 220
Score = 45.4 bits (106), Expect = 0.005
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 11/65 (16%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R PM +A ++ + + C CG A V HVIP S GGA T +NCVA C
Sbjct: 120 RIPMTRAALMHRDRFRCAYCGSKAD----------TVDHVIPRSRGGAHTWENCVAACSA 169
Query: 251 C-HRE 254
C HR+
Sbjct: 170 CNHRK 174
>UniRef100_A3DFY5 HNH endonuclease n=1 Tax=Clostridium thermocellum
ATCC 27405 RepID=A3DFY5_CLOTH
Length = 119
Score = 45.4 bits (106), Expect = 0.005
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 206 ICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHREL 255
+CE C K P EVHH+IPLS GG + N ++LC CH +
Sbjct: 64 LCEECQKYGRL-----TPAEEVHHIIPLSKGGTNADSNLMSLCKQCHSSI 108
>UniRef100_Q4CA22 RNA-directed DNA polymerase (Reverse
transcriptase):HNH endonuclease n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4CA22_CROWT
Length = 584
Score = 45.4 bits (106), Expect = 0.005
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQK---VYVRDPMVKAWI 199
G+ + + T + L + +++ + TL +PE S K Y P A +
Sbjct: 463 GKQGKWTFQTREYVLYHHTETEIKRHTLVKPESSPYDGNWTYWSKRRGTYTGTPARVAKL 522
Query: 200 LQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
L++ KGIC C ++ F D +EV H+IP S GG DT +N AL +CH
Sbjct: 523 LKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 570
>UniRef100_Q4BZL5 HNH endonuclease n=1 Tax=Crocosphaera watsonii WH
8501 RepID=Q4BZL5_CROWT
Length = 276
Score = 45.4 bits (106), Expect = 0.005
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQK---VYVRDPMVKAWI 199
G+ + + T + L + +++ + TL +PE S K Y P A +
Sbjct: 155 GKQGKWTFQTREYVLYHHTETEIKRHTLVKPESSPYDGNWTYWSKRRGTYTGTPARVAKL 214
Query: 200 LQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
L++ KGIC C ++ F D +EV H+IP S GG DT +N AL +CH
Sbjct: 215 LKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 262
>UniRef100_Q4BXV9 HNH endonuclease n=1 Tax=Crocosphaera watsonii WH
8501 RepID=Q4BXV9_CROWT
Length = 183
Score = 45.4 bits (106), Expect = 0.005
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQK---VYVRDPMVKAWI 199
G+ + + T + L + +++ + TL +PE S K Y P A +
Sbjct: 62 GKQGKWTFQTREYVLYHHTETEIKRHTLVKPESSPYDGNWTYWSKRRGTYTGTPARVAKL 121
Query: 200 LQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
L++ KGIC C ++ F D +EV H+IP S GG DT +N AL +CH
Sbjct: 122 LKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 169
>UniRef100_B5CRX9 Putative uncharacterized protein n=1
Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CRX9_9FIRM
Length = 101
Score = 45.4 bits (106), Expect = 0.005
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
CE C + P E+HH +PLS GG N +ALC +CH ++H
Sbjct: 48 CEKCYERGVLV-----PVEEIHHKLPLSEGGTHDRSNLIALCKSCHSQIH 92
>UniRef100_B4BFN4 HNH endonuclease n=1 Tax=Clostridium thermocellum
DSM 4150 RepID=B4BFN4_CLOTM
Length = 119
Score = 45.4 bits (106), Expect = 0.005
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 206 ICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHREL 255
+CE C K P EVHH+IPLS GG + N ++LC CH +
Sbjct: 64 LCEECQKYGSL-----TPAEEVHHIIPLSRGGTNADSNLMSLCKQCHSSI 108
>UniRef100_A0YT41 Putative uncharacterized protein n=1 Tax=Lyngbya
sp. PCC 8106 RepID=A0YT41_9CYAN
Length = 280
Score = 45.4 bits (106), Expect = 0.005
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P K ++L++ KG C CG + DG+ LE H+IP S GG D DN L +CH
Sbjct: 202 PAEKVYLLKKQKGRCTYCG----LHFQDGD-LLETDHIIPKSKGGKDNRDNKQLLHRHCH 256
>UniRef100_Q538B5 MnlI restriction endonuclease n=1 Tax=Moraxella
nonliquefaciens RepID=Q538B5_MORNO
Length = 386
Score = 45.1 bits (105), Expect = 0.007
Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 9/62 (14%)
Query: 217 YLNDGNPYLEVHHVIPLSSGGA-DTTDNCVALCPNCHRELHYSKN------AKELIEMLY 269
Y + YLEVHHVI +S D DN V +CP CHR L SKN KELI +
Sbjct: 301 YRHSDRYYLEVHHVISFASDRTLDQIDNLVKVCPTCHRAL--SKNRADEQYQKELISEIL 358
Query: 270 VN 271
+N
Sbjct: 359 IN 360
>UniRef100_Q4BZ69 HNH endonuclease n=1 Tax=Crocosphaera watsonii WH
8501 RepID=Q4BZ69_CROWT
Length = 87
Score = 45.1 bits (105), Expect = 0.007
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 185 LQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNC 244
++ Y P A +L++ KGIC C ++ F D +EV H+IP S GG DT +N
Sbjct: 11 IRGTYTGTPTRVAKLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYNNL 65
Query: 245 VALCPNCH 252
AL +CH
Sbjct: 66 QALHRHCH 73
>UniRef100_C2ECC9 Recombinase n=1 Tax=Lactobacillus ruminis ATCC
25644 RepID=C2ECC9_9LACO
Length = 270
Score = 45.1 bits (105), Expect = 0.007
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 135 SFWASIIRGELSELSQ------PTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKV 188
+F+++ I G L L Q ES KL+KK + + PV+ LQ
Sbjct: 105 NFYSATINGYLDYLDQLKIVNAGEIKESPSERYKIKLLKKPVR-----KSPVQTTILQ-- 157
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYL-NDGNPYLEVHHVIPLSSG-----GADTTD 242
Y R+P +S C + F ND ++E HH+IP+ D D
Sbjct: 158 YPRNPHEMLAAKHRSGWKCCYDSSHETFISENDHKNFVEGHHLIPMQHQCDFEYTIDFAD 217
Query: 243 NCVALCPNCHRELHYS--KNAKELIEMLY 269
N + LCP CHR +H++ ++ ++E Y
Sbjct: 218 NIIPLCPTCHRRIHFAIKQDRNRMLEKFY 246
>UniRef100_B6G4P2 Putative uncharacterized protein n=1
Tax=Collinsella intestinalis DSM 13280
RepID=B6G4P2_9ACTN
Length = 154
Score = 45.1 bits (105), Expect = 0.007
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 174 EGSRKPVEVERLQKVYVRD--PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVI 231
+G +KP+ R + P ++ +L++ C+ CG AP + L V H++
Sbjct: 62 DGKKKPMRARRSSGAERKPLPPRIRYEVLERDGYTCQYCGAKAP------SVTLHVDHIV 115
Query: 232 PLSSGGADTTDNCVALCPNCH 252
P++ GG D N VA C C+
Sbjct: 116 PVAEGGTDDLSNLVAACEYCN 136
>UniRef100_B4AUS3 RNA-directed DNA polymerase (Reverse
transcriptase) n=1 Tax=Cyanothece sp. PCC 7822
RepID=B4AUS3_9CHRO
Length = 606
Score = 45.1 bits (105), Expect = 0.007
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
+L++ KG C +CG + ++G+ LEV H+IP SSGG D +N L +CH E
Sbjct: 527 LLKEQKGKCNHCG----LFFSEGDK-LEVDHIIPKSSGGRDEYENLQLLHRHCHDE 577
>UniRef100_B0MB23 Putative uncharacterized protein n=1
Tax=Anaerostipes caccae DSM 14662 RepID=B0MB23_9FIRM
Length = 99
Score = 45.1 bits (105), Expect = 0.007
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
P EVHH +PLS GG DN ++LC +CH ++H
Sbjct: 47 PVDEVHHKLPLSEGGNHNKDNLISLCKSCHAKIH 80
>UniRef100_A5P8I1 Putative uncharacterized protein n=1
Tax=Erythrobacter sp. SD-21 RepID=A5P8I1_9SPHN
Length = 274
Score = 45.1 bits (105), Expect = 0.007
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPL 233
EG+ K V R + R+P + L+ C+ C + D +EVHH+ PL
Sbjct: 173 EGAVKLTVVRRRE----RNPRNRLLCLRIHGASCKICSLSPGQLYGDAGAIIEVHHLQPL 228
Query: 234 SSGGA----DTTDNCVALCPNCHRELH 256
S G D + + LCPNCHR +H
Sbjct: 229 SLVGEPRPYDPATDLIPLCPNCHRAVH 255
>UniRef100_UPI00005F8CDE COG0419: ATPase involved in DNA repair n=1
Tax=Yersinia frederiksenii ATCC 33641
RepID=UPI00005F8CDE
Length = 330
Score = 44.7 bits (104), Expect = 0.009
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 190 VRDPMVKAWILQQSKGICENCGKNAPFYL-NDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
+ DP V+ +L++ C NCG +D LE+HH+ GG +T +N + LC
Sbjct: 245 IPDP-VRVKVLERDHHSCRNCGWQYQLKKPSDPRSLLELHHIEHHVDGGENTVENLITLC 303
Query: 249 PNCHRELH 256
CH E+H
Sbjct: 304 NVCHDEVH 311
>UniRef100_B9MNG3 HNH endonuclease n=1 Tax=Anaerocellum thermophilum
DSM 6725 RepID=B9MNG3_ANATD
Length = 443
Score = 44.7 bits (104), Expect = 0.009
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VK ++L++ C CG G P LEV HVIP S GG D DN V C C+++
Sbjct: 183 VKEYLLEKFNWRCVYCGAT-------GVP-LEVEHVIPKSRGGTDRVDNLVIACHGCNQK 234
Query: 255 LHYSKNAKELIEMLYVNINRLQK 277
K K E Y I +L K
Sbjct: 235 ----KGNKTAEEFGYPEIQKLVK 253
>UniRef100_A6THN6 Putative uncharacterized protein n=1
Tax=Klebsiella pneumoniae subsp. pneumoniae MGH 78578
RepID=A6THN6_KLEP7
Length = 212
Score = 44.7 bits (104), Expect = 0.009
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 169 TLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEV 227
T+ EG+ V + R Y RD + L+ C+ CG + A Y G ++ +
Sbjct: 105 TMEYVEGAAMQVVINR----YERDRQARQAALRLHGCRCQVCGLDMASRYGEIGQGFIHI 160
Query: 228 HHVIPLSSGGADTTDN----CVALCPNCHRELH 256
HH+IPLS D N + +CPNCH LH
Sbjct: 161 HHLIPLSGIKQDYRLNPETDLIPVCPNCHAMLH 193
>UniRef100_A5V9C7 HNH endonuclease n=1 Tax=Sphingomonas wittichii
RW1 RepID=A5V9C7_SPHWW
Length = 426
Score = 44.7 bits (104), Expect = 0.009
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 181 EVERLQKVYV----RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSG 236
E ++QK +V + KA+ +C+ C + +++HH++PLSSG
Sbjct: 304 EGNKVQKTHVTIERNSGLRKAFFAANPTTVCDVCNLDTARSYPWTERVMDLHHLLPLSSG 363
Query: 237 ----GADTT-DNCVALCPNCHRELH 256
G TT D+ V LCP+CHR +H
Sbjct: 364 TRVIGRGTTFDDLVPLCPSCHRAVH 388
>UniRef100_C3AFV2 Putative uncharacterized protein n=1 Tax=Bacillus
mycoides DSM 2048 RepID=C3AFV2_BACMY
Length = 140
Score = 44.7 bits (104), Expect = 0.009
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 181 EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT 240
E E+L++ + R+ + W + +CE C +L HH IPL +GG +
Sbjct: 3 EYEQLRQKF-RNISKQYWKQTKKPKMCEKCFSKTDVHL---------HHKIPLKTGGTND 52
Query: 241 TDNCVALCPNCHRELH 256
DN + LC CH E H
Sbjct: 53 YDNLIPLCEECHWEFH 68
>UniRef100_B3Z1Y7 Gp45 n=1 Tax=Bacillus cereus W RepID=B3Z1Y7_BACCE
Length = 375
Score = 44.7 bits (104), Expect = 0.009
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPL 233
+G K E RL+K R+ K ++L G C CG A + H+IP
Sbjct: 108 DGLEKIREQNRLRKQKQREKE-KQYLLGNDMGTCAYCGDQAN----------TLDHLIPK 156
Query: 234 SSGGADTTDNCVALCPNCH 252
S GG DT +NCV+ C C+
Sbjct: 157 SHGGLDTQENCVSCCKQCN 175
>UniRef100_A6FSV0 HNH nuclease n=1 Tax=Roseobacter sp. AzwK-3b
RepID=A6FSV0_9RHOB
Length = 114
Score = 44.7 bits (104), Expect = 0.009
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 196 KAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
+AW ++++G CE CG LN G+ E H IP GG ++ +NCV LC CHR+
Sbjct: 13 QAW--ERARGKCEECGVK----LNVGDRR-EFDHRIPCGLGGDNSLENCVVLCAACHRD 64
>UniRef100_Q82CY5 Putative uncharacterized protein n=1
Tax=Streptomyces avermitilis RepID=Q82CY5_STRAW
Length = 177
Score = 44.3 bits (103), Expect = 0.012
Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 174 EGSRKP-VEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
+G + P R+Q++ VRD V + G C+ CG DG PY E H+ P
Sbjct: 39 QGEKFPKTRAARIQRL-VRDAAVSRNVKDLYGGECQACGLR--LVGPDGRPYSEGAHIRP 95
Query: 233 LSSG--GADTTDNCVALCPNCHREL 255
L G D N + LCPNCH L
Sbjct: 96 LGKPHCGPDVEPNVLCLCPNCHVRL 120
>UniRef100_Q3A0C0 HNH endonuclease family protein n=1 Tax=Pelobacter
carbinolicus DSM 2380 RepID=Q3A0C0_PELCD
Length = 96
Score = 44.3 bits (103), Expect = 0.012
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 198 WILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
W + + GIC CGK G L + H++PL GG T NCVA C C+ +
Sbjct: 27 WKNRIATGICHYCGKQV------GARALTLDHIVPLVRGGRSTKGNCVAACKECNSQ 77
>UniRef100_Q0VRW5 Reverse transcriptase/maturase homolog n=1
Tax=Alcanivorax borkumensis SK2 RepID=Q0VRW5_ALCBS
Length = 552
Score = 44.3 bits (103), Expect = 0.012
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 227 VHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+HHVI GG D DN V L PNCHR+LH
Sbjct: 518 IHHVIEQHKGGTDKLDNLVLLHPNCHRQLH 547
>UniRef100_B9JB56 Putative uncharacterized protein n=1
Tax=Agrobacterium radiobacter K84 RepID=B9JB56_AGRRK
Length = 219
Score = 44.3 bits (103), Expect = 0.012
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 171 SQPEGS--RKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVH 228
S+ EG+ K V R+ + V VKA L SK C+ CG + L DG Y E H
Sbjct: 97 SEIEGAVLAKEVTTNRIIRDTVMTCKVKA--LHHSK--CQICGTSIS--LPDGRAYSEAH 150
Query: 229 HVIPLSS--GGADTTDNCVALCPNCHREL 255
H+IPL + G D N + +CPN H L
Sbjct: 151 HIIPLGAPHRGPDIPSNIIIVCPNHHAML 179
>UniRef100_B1MMU0 Probable HNH endonuclease n=1 Tax=Mycobacterium
abscessus ATCC 19977 RepID=B1MMU0_MYCA9
Length = 183
Score = 44.3 bits (103), Expect = 0.012
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R PM +A ++ + + C CG A + HVIP S GGA + +NCVA C +
Sbjct: 83 RVPMTRAALMHRDRFRCAYCGGRAD----------TIDHVIPRSKGGAHSWENCVACCSS 132
Query: 251 C-HRE 254
C HR+
Sbjct: 133 CNHRK 137
>UniRef100_A0LM25 HNH endonuclease n=1 Tax=Syntrophobacter
fumaroxidans MPOB RepID=A0LM25_SYNFM
Length = 309
Score = 44.3 bits (103), Expect = 0.012
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
V+ +LQ+ C CG + + +LE HHV P GG +T +N + LC CH
Sbjct: 246 VRRQVLQRDAHKCLRCGWSHERWNPSDPRHLEAHHVDPHGRGGENTPENLITLCNICHDA 305
Query: 255 LH 256
+H
Sbjct: 306 VH 307
>UniRef100_Q4CAS8 HNH endonuclease n=1 Tax=Crocosphaera watsonii WH
8501 RepID=Q4CAS8_CROWT
Length = 164
Score = 44.3 bits (103), Expect = 0.012
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y P A +L++ KGIC C ++ F D +EV H+IP S GG DT N AL
Sbjct: 75 YTGTPTRVAKLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYSNLQALH 129
Query: 249 PNCH 252
+CH
Sbjct: 130 RHCH 133
>UniRef100_Q4C0L4 RNA-directed DNA polymerase (Reverse
transcriptase):HNH endonuclease n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4C0L4_CROWT
Length = 471
Score = 44.3 bits (103), Expect = 0.012
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 165 LIKKTLSQPEGSRKPVEVERLQK---VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDG 221
+++ TL +PE S K Y P A +L++ KGIC C + F D
Sbjct: 355 ILRHTLVKPEASPYDGNWTYWSKRRGTYSGTPTRVAKLLKKQKGICPQCKQY--FTPED- 411
Query: 222 NPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+EV H+IP S GG DT +N AL +CH
Sbjct: 412 --LIEVDHIIPKSKGGKDTYNNLQALHRHCH 440
>UniRef100_Q4BXA1 HNH endonuclease n=1 Tax=Crocosphaera watsonii WH
8501 RepID=Q4BXA1_CROWT
Length = 165
Score = 44.3 bits (103), Expect = 0.012
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 165 LIKKTLSQPEGSRKPVEVERLQK---VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDG 221
+++ TL +PE S K Y P A +L++ KGIC C + F D
Sbjct: 49 ILRHTLVKPEASPYDGNWTYWSKRRGTYSGTPTRVAKLLKKQKGICPQCKQY--FTPED- 105
Query: 222 NPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+EV H+IP S GG DT +N AL +CH
Sbjct: 106 --LIEVDHIIPKSKGGKDTYNNLQALHRHCH 134
>UniRef100_C3M8C3 Group II intron encoded reverse transcriptase n=1
Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum) RepID=C3M8C3_9ENTR
Length = 560
Score = 44.3 bits (103), Expect = 0.012
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VK + ++ KG C C + D L VHH+ P + GG + N L NCHR+
Sbjct: 496 VKVNLYKRQKGYCPLCDQEL-----DNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQ 550
Query: 255 LHYSKNAKEL 264
LH SK K L
Sbjct: 551 LH-SKKGKML 559
>UniRef100_C2LK08 Putative uncharacterized protein n=1 Tax=Proteus
mirabilis ATCC 29906 RepID=C2LK08_PROMI
Length = 98
Score = 44.3 bits (103), Expect = 0.012
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
C CG F DG E+ H+IPL GG DT +NC LC CHR+
Sbjct: 48 CAACGSLLAF--PDG---FELDHIIPLFKGGKDTIENCQVLCIECHRK 90
>UniRef100_A7I926 HNH endonuclease n=1 Tax=Candidatus Methanoregula
boonei 6A8 RepID=A7I926_METB6
Length = 266
Score = 44.3 bits (103), Expect = 0.012
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 155 ESLLNMRVSKLIKKTLSQ-------PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGIC 207
ES ++ ++ K+TL++ PE + E E +Q +Y R+ ++ ++ C
Sbjct: 134 ESEWDILSKEIEKRTLTKYEEIFTCPEYFTEGKEREIIQTIYERNSKLREMAIKMHGTTC 193
Query: 208 ENCGKN-APFYLNDGNPYLEVHHVIPLSS------GGADTTDNCVALCPNCHRELHYSKN 260
CG N A Y Y+E+HH++P S + + + LC NCHR +H +
Sbjct: 194 SVCGFNFAKKYGILSEGYIEIHHLVPHSEHKIKGESEINPETDLIPLCSNCHRIIHKPEK 253
Query: 261 AKELIEM 267
+ E+
Sbjct: 254 MLSIEEL 260
>UniRef100_Q0HZ96 RNA-directed DNA polymerase n=1 Tax=Shewanella sp.
MR-7 RepID=Q0HZ96_SHESR
Length = 549
Score = 43.9 bits (102), Expect = 0.016
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 227 VHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
+HH++ GG+D DN V L PNCHR+LH S
Sbjct: 518 IHHIVERVRGGSDEMDNLVLLHPNCHRQLHSS 549
>UniRef100_A5N0L8 Phage-related protein n=2 Tax=Clostridium kluyveri
RepID=A5N0L8_CLOK5
Length = 119
Score = 43.9 bits (102), Expect = 0.016
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 16/82 (19%)
Query: 181 EVERLQKVYVRDPMVK-----AWILQQSKGI-----CENCGKNAPFYLNDGNPYLEVHHV 230
E R +K Y RDP + AW + + I CE C + P EVHH+
Sbjct: 30 EAARYEK-YDRDPATRKRYGRAWKRIRDRYIAAHPLCEECKRQGKL-----TPATEVHHI 83
Query: 231 IPLSSGGADTTDNCVALCPNCH 252
+PL+ GG N ++LC +CH
Sbjct: 84 LPLARGGTHDRSNLMSLCTSCH 105
>UniRef100_B0JVV8 RNA-directed DNA polymerase n=1 Tax=Microcystis
aeruginosa NIES-843 RepID=B0JVV8_MICAN
Length = 577
Score = 43.9 bits (102), Expect = 0.016
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P KA +L++ +G C CG Y DG+ LE H+IP S GG + DN L H
Sbjct: 501 PPEKAVLLKRQQGRCAYCG----LYFQDGD-ILETDHIIPKSKGGKNNRDNKQLL----H 551
Query: 253 RELHYSKNA 261
R H SK A
Sbjct: 552 RHCHDSKTA 560
>UniRef100_A8ZKQ7 RNA-directed DNA polymerase n=1 Tax=Acaryochloris
marina MBIC11017 RepID=A8ZKQ7_ACAM1
Length = 576
Score = 43.9 bits (102), Expect = 0.016
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P + +L++ KG C CG F+ + LEV H++P S GG D N L H
Sbjct: 506 PKRVSMLLKKQKGKCAQCGM---FFREED--LLEVDHILPTSMGGLDVYKNLQLL----H 556
Query: 253 RELHYSKNAKE 263
R HY K AKE
Sbjct: 557 RHCHYVKTAKE 567
>UniRef100_B0N9V8 Putative uncharacterized protein n=1
Tax=Clostridium scindens ATCC 35704 RepID=B0N9V8_EUBSP
Length = 124
Score = 43.9 bits (102), Expect = 0.016
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 180 VEVERLQKVYVRDPMVK-----AWI-----LQQSKGICENCGKNAPFYLNDGNPYLEVHH 229
+E +R +K Y RDP K AW + +CE C ++ + +VHH
Sbjct: 29 LENQRYEK-YGRDPAAKRRYGRAWKRIRDRYMNAHPLCEQCQRDGRLVKAE-----QVHH 82
Query: 230 VIPLSSGGADTTDNCVALCPNCHRELHYSKNAK 262
+ PL+ GG +N ++LC CH +H + +
Sbjct: 83 IKPLAEGGTHEENNLLSLCKECHARIHAKRGER 115
>UniRef100_B2IX42 HNH endonuclease n=1 Tax=Nostoc punctiforme PCC
73102 RepID=B2IX42_NOSP7
Length = 95
Score = 43.5 bits (101), Expect = 0.021
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P VK ++ ++ K C++CGK ++ + H+IPL+ GG + N LC C+
Sbjct: 25 PEVKKYVFERDKYQCQSCGKTTT------ETHISIDHIIPLARGGQNDISNLQTLCLTCN 78
Query: 253 RE 254
++
Sbjct: 79 QQ 80
>UniRef100_B1YFT2 HNH endonuclease n=1 Tax=Exiguobacterium sibiricum
255-15 RepID=B1YFT2_EXIS2
Length = 418
Score = 43.5 bits (101), Expect = 0.021
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 14/81 (17%)
Query: 195 VKAWILQQSKGICENC-GKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
V+ ++ + K +C++C GK+ LN VHH+ +GG D DN + LC CH+
Sbjct: 182 VREYVFFRDKHMCQHCKGKSKDKILN-------VHHIESRRTGG-DAPDNLITLCETCHK 233
Query: 254 ELHYSKNAKELIEMLYVNINR 274
++H KE +E L+ +R
Sbjct: 234 KIH-----KENLEHLFQRKSR 249
>UniRef100_A9IAX2 Reverse transcriptase n=1 Tax=Bordetella petrii
DSM 12804 RepID=A9IAX2_BORPD
Length = 571
Score = 43.5 bits (101), Expect = 0.021
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 185 LQKVYVRDPMVKAWILQQSKG-ICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDN 243
+Q ++ R +VK W+ Q K ICE P G HH+ GG +T +N
Sbjct: 492 VQSLHERRKLVKLWLAQDGKCLICEQ-----PITKETG---WHAHHIQRRVDGGKNTLEN 543
Query: 244 CVALCPNCHRELH 256
V L PNCH +LH
Sbjct: 544 LVLLHPNCHNQLH 556
>UniRef100_Q9R669 Group II SELF-splicing intron ORF (Fragments) n=1
Tax=Azotobacter vinelandii RepID=Q9R669_AZOVI
Length = 86
Score = 43.5 bits (101), Expect = 0.021
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 227 VHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+HH+I GG D DN V L PNCHR+LH
Sbjct: 57 IHHIIKRHMGGGDELDNLVLLHPNCHRQLH 86
>UniRef100_Q8GMB4 Group II intron-associated open reading frame n=1
Tax=Azotobacter vinelandii RepID=Q8GMB4_AZOVI
Length = 563
Score = 43.5 bits (101), Expect = 0.021
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 227 VHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+HH+I GG D DN V L PNCHR+LH
Sbjct: 519 IHHIIKRHMGGGDELDNLVLLHPNCHRQLH 548
>UniRef100_Q4C4V3 RNA-directed DNA polymerase n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4C4V3_CROWT
Length = 578
Score = 43.5 bits (101), Expect = 0.021
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y P + +L++ KGIC C ++ F D +EV H+IP S GG DT +N AL
Sbjct: 506 YTGTPARVSRLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGLDTYNNLQALH 560
Query: 249 PNCH 252
+CH
Sbjct: 561 RHCH 564
>UniRef100_Q4C417 HNH endonuclease n=1 Tax=Crocosphaera watsonii WH
8501 RepID=Q4C417_CROWT
Length = 104
Score = 43.5 bits (101), Expect = 0.021
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 185 LQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNC 244
++ Y P + +L++ KGIC C ++ F D +EV H+IP S GG DT +N
Sbjct: 11 IRGAYTGTPNRVSKLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYNNL 65
Query: 245 VALCPNCH 252
AL +CH
Sbjct: 66 QALHRHCH 73
>UniRef100_Q4BYQ4 HNH endonuclease n=2 Tax=Crocosphaera watsonii WH
8501 RepID=Q4BYQ4_CROWT
Length = 175
Score = 43.5 bits (101), Expect = 0.021
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y P + +L++ KGIC C ++ F D +EV H+IP S GG DT +N AL
Sbjct: 103 YTGTPARVSRLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGLDTYNNLQALH 157
Query: 249 PNCH 252
+CH
Sbjct: 158 RHCH 161
>UniRef100_Q1YWU8 Putative uncharacterized protein n=1
Tax=Photobacterium profundum 3TCK RepID=Q1YWU8_PHOPR
Length = 244
Score = 43.5 bits (101), Expect = 0.021
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 171 SQPEGSRKPVEVERLQK-VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHH 229
S PEG K V + ++ R+ ++ + L S +CE + A Y G ++ VHH
Sbjct: 138 SFPEGMAKKVVINSFERNKTARNSCIEEYGLSCS--VCEFNFEKA--YGELGTGFIHVHH 193
Query: 230 VIPLSSGG----ADTTDNCVALCPNCHRELHYSKNAKELIEM 267
V+ +SS G D + V +CPNCH LH K A + E+
Sbjct: 194 VVDISSIGYAYQVDPKKDLVPVCPNCHAMLHKRKPAFTVQEL 235
>UniRef100_C3X695 Predicted protein n=1 Tax=Oxalobacter formigenes
HOxBLS RepID=C3X695_OXAFO
Length = 276
Score = 43.5 bits (101), Expect = 0.021
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 203 SKGICEN----CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHREL-HY 257
SK I E+ CG++ +E+HH+ P GG D+ +NC+ LC +CH E+ HY
Sbjct: 4 SKEIVEDALVACGRSCCICHKFCGVRIEMHHLKPKHLGGDDSFENCIPLCFDCHAEVEHY 63
Query: 258 SKN 260
+ N
Sbjct: 64 NNN 66
>UniRef100_C3IFK0 5-methylcytosine-specific restriction enzyme A n=1
Tax=Bacillus thuringiensis IBL 4222 RepID=C3IFK0_BACTU
Length = 260
Score = 43.5 bits (101), Expect = 0.021
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 160 MRVSKLIKKTLSQP---EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-AP 215
M + KL +K + EG+ K + V VY R+ + + ++ C CG N
Sbjct: 139 MNLLKLPEKIIDPEKYIEGATKQINVN----VYERNSVARMKCIEHYGVNCIICGFNFEE 194
Query: 216 FYLNDGNPYLEVHHVIPLSSGG----ADTTDNCVALCPNCHRELHYSKNAKELIEM 267
Y + G ++ VHH+I L D ++ +CPNCH LH K A + EM
Sbjct: 195 IYGSVGKEFIHVHHLIELREINEQYEVDPIEDLRPVCPNCHAILHKRKPAYSIKEM 250
>UniRef100_C3BJL8 Paclitaxel/taxanoid biosynthesis susceptibility
protein TS1 n=1 Tax=Bacillus pseudomycoides DSM 12442
RepID=C3BJL8_9BACI
Length = 374
Score = 43.5 bits (101), Expect = 0.021
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS------KNAKELIEMLYVNINRLQ 276
L HH+I SGG+D DN V + CH++ H K K+ E ++NI RLQ
Sbjct: 163 LHTHHIIERCSGGSDMADNLVTVHEECHQKFHQGTIKHIFKKPKQYKETAFMNILRLQ 220
>UniRef100_C3AIY7 Hnh endonuclease n=1 Tax=Bacillus mycoides Rock1-4
RepID=C3AIY7_BACMY
Length = 206
Score = 43.5 bits (101), Expect = 0.021
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 221 GNPYLEVHHVIPLSS---GGADTTDNCVALCPNCHRELHYSK---NAKELIEMLYVN 271
G Y+E HHVIP+S G ++ + +C NCHR LH K + ++L E+L+ N
Sbjct: 150 GEDYIEGHHVIPVSELEEGSKTKVEDIILVCANCHRMLHRKKPWLSKEQLKEILHSN 206
>UniRef100_C1DQC3 RNA-directed DNA polymerase n=1 Tax=Azotobacter
vinelandii DJ RepID=C1DQC3_AZOVD
Length = 515
Score = 43.5 bits (101), Expect = 0.021
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 227 VHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+HH+I GG D DN V L PNCHR+LH
Sbjct: 471 IHHIIKRHMGGGDELDNLVLLHPNCHRQLH 500
>UniRef100_C1AET6 Putative uncharacterized protein n=3
Tax=Mycobacterium bovis RepID=C1AET6_MYCBO
Length = 222
Score = 43.5 bits (101), Expect = 0.021
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 11/65 (16%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R PM +A ++ + + C CG A V HV+P S GGA + +NCVA C
Sbjct: 122 RVPMTRAALMHRDRFCCAYCGGKAD----------TVDHVVPRSRGGAHSWENCVACCSP 171
Query: 251 C-HRE 254
C HR+
Sbjct: 172 CNHRK 176
>UniRef100_B0MFF1 Putative uncharacterized protein n=1
Tax=Anaerostipes caccae DSM 14662 RepID=B0MFF1_9FIRM
Length = 179
Score = 43.5 bits (101), Expect = 0.021
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAK 262
P++EVHH+IP + G DT +N LC CH +L+ AK
Sbjct: 25 PFVEVHHIIPQNEGDEDTIENAAPLCSRCH-DLYVDNPAK 63
>UniRef100_A3YQ82 MnlI restriction endonuclease n=1
Tax=Campylobacter jejuni subsp. jejuni 260.94
RepID=A3YQ82_CAMJE
Length = 259
Score = 43.5 bits (101), Expect = 0.021
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 206 ICENCGK-----NAPFYLNDGNPYLEVHHVIPLS-SGGADTTDNCVALCPNCHRELHYSK 259
+C C K + F + +G YLE+HH I + S D DN V LCP CHR L ++
Sbjct: 155 LCAACNKTYNIDDRSFKMKNGFYYLELHHNIAFAYSNECDELDNLVKLCPTCHRALTRNR 214
Query: 260 NAKELIEMLYVNI 272
+ + L NI
Sbjct: 215 ADENYQKELIKNI 227
>UniRef100_A1ZG09 Paclitaxel/taxanoid biosynthesis susceptibility
protein TS1 n=1 Tax=Microscilla marina ATCC 23134
RepID=A1ZG09_9SPHI
Length = 453
Score = 43.5 bits (101), Expect = 0.021
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
++ ++L + K C+N + L+VHH++ S GG DT +N + LC CH
Sbjct: 180 IREYVLHRDKHSCQNPDCKNKYK----GKILQVHHIVFKSMGGGDTPNNLITLCTKCHTS 235
Query: 255 LHYSK 259
++ K
Sbjct: 236 ANHKK 240
>UniRef100_O53196 HNH endonuclease family protein n=5
Tax=Mycobacterium tuberculosis RepID=O53196_MYCTU
Length = 222
Score = 43.5 bits (101), Expect = 0.021
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 11/65 (16%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R PM +A ++ + + C CG A V HV+P S GGA + +NCVA C
Sbjct: 122 RVPMTRAALMHRDRFCCAYCGGKAD----------TVDHVVPRSRGGAHSWENCVACCSP 171
Query: 251 C-HRE 254
C HR+
Sbjct: 172 CNHRK 176
>UniRef100_Q8YJX0 Alr8560 protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YJX0_ANASP
Length = 600
Score = 43.1 bits (100), Expect = 0.027
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 157 LLNMRVSKLIKKTLSQPEGSRKPVEVE------RLQKVYVRDPMVKAWILQQSKGICENC 210
LL R +++++ Q +GSR P + + R+ K + P+ A +L+ KG C +C
Sbjct: 481 LLKHRETRIVRHI--QVKGSRSPFDGDWVYWSSRMGK-HPEAPIRVATLLKMQKGKCTHC 537
Query: 211 GKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
G F+ D +E+ H IP S GG D+ DN L +CH
Sbjct: 538 GLF--FHHED---LMEIDHKIPRSQGGKDSYDNLQLLHGHCH 574
>UniRef100_Q5YZE7 Putative uncharacterized protein n=1 Tax=Nocardia
farcinica RepID=Q5YZE7_NOCFA
Length = 760
Score = 43.1 bits (100), Expect = 0.027
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
+KA + Q+ G C CG YLE H+IPLS GGA + N LC C+R
Sbjct: 705 IKAEVWQRDGGRCVECGSGH---------YLEFDHIIPLSRGGATSAANLQILCRACNR 754
>UniRef100_B8ZRA7 Putative uncharacterized protein n=2
Tax=Mycobacterium leprae RepID=B8ZRA7_MYCLB
Length = 215
Score = 43.1 bits (100), Expect = 0.027
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R PM +A ++ + + C CG A V HV+P S GG + +NCVA C
Sbjct: 115 RVPMTRAALMHRDRFCCAYCGAKAD----------TVDHVVPRSRGGDHSWENCVACCST 164
Query: 251 CHRELHYSKNAKELIEMLYV 270
C ++ K K L E+ +V
Sbjct: 165 C----NHRKGDKLLTELGWV 180
>UniRef100_B8G6B2 HNH endonuclease n=1 Tax=Chloroflexus aggregans
DSM 9485 RepID=B8G6B2_CHLAD
Length = 174
Score = 43.1 bits (100), Expect = 0.027
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 190 VRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCP 249
+R P + + + + C+ CGK G YL + HVIP S GG T +N V C
Sbjct: 73 LRLPCSRRGVFARDRETCQYCGKQP------GRAYLTMDHVIPRSQGGQTTWENVVTACR 126
Query: 250 NC-HRE 254
+C HR+
Sbjct: 127 DCNHRK 132
>UniRef100_B7GM48 Restriction endonuclease, McrA/HNH family, phage
related n=1 Tax=Anoxybacillus flavithermus WK1
RepID=B7GM48_ANOFW
Length = 92
Score = 43.1 bits (100), Expect = 0.027
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 13/73 (17%)
Query: 204 KGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKE 263
KG+CE CG+ + L VHH+ P GG +T LC CH+++H +E
Sbjct: 2 KGMCELCGRE--------DVVLTVHHLTPKEYGGTET----AKLCIPCHKQIHALYTNEE 49
Query: 264 LIEMLYVNINRLQ 276
L LY I +LQ
Sbjct: 50 LASRLY-TIEQLQ 61
>UniRef100_B5Y2L5 HNH endonuclease domain protein n=1 Tax=Klebsiella
pneumoniae 342 RepID=B5Y2L5_KLEP3
Length = 212
Score = 43.1 bits (100), Expect = 0.027
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 169 TLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEV 227
T+ EG+ V V R Y RD + L+ C+ CG + A Y + G ++ +
Sbjct: 105 TMEYVEGAAMQVVVNR----YERDRQARQAALRLHGCRCQVCGLDMASRYGDIGQGFIHI 160
Query: 228 HHVIPLSSGGADTTDN----CVALCPNCHRELH 256
HH+IPL D N + +CPNCH LH
Sbjct: 161 HHLIPLYGIKQDYRLNPETDLIPVCPNCHAMLH 193
>UniRef100_B4SDY4 HNH nuclease n=1 Tax=Pelodictyon
phaeoclathratiforme BU-1 RepID=B4SDY4_PELPB
Length = 309
Score = 43.1 bits (100), Expect = 0.027
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
++ +LQ+ C+ CG + + +LE HH+ GG +T +N V LC CH +
Sbjct: 246 IRREVLQRDDYRCQQCGWHQEMWNQSDPRHLEAHHIKQHVEGGENTKENLVTLCNICHDK 305
Query: 255 LH 256
H
Sbjct: 306 EH 307
>UniRef100_A1REN7 HNH nuclease n=1 Tax=Shewanella sp. W3-18-1
RepID=A1REN7_SHESW
Length = 387
Score = 43.1 bits (100), Expect = 0.027
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 183 ERLQKVYVRDPMVKAWILQQSKGICENC---GKNAPFYLNDGNPYLEVHHVIPLSSGGAD 239
++L K + ++A ++ + C C G+ P LE+ + P + GG+
Sbjct: 4 QKLNKRRIPSVAMRAKLIAKHNNQCAMCTISGEEIP---------LELASITPFNEGGSM 54
Query: 240 TTDNCVALCPNCHRELHYSKNAKELIEMLY 269
T +N + LCPNCHR + E + LY
Sbjct: 55 TEENFLLLCPNCHRYMTMGPKEIEFVNFLY 84
>UniRef100_Q4C651 HNH endonuclease n=1 Tax=Crocosphaera watsonii WH
8501 RepID=Q4C651_CROWT
Length = 379
Score = 43.1 bits (100), Expect = 0.027
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 163 SKLIKKTLSQPEGSRKPVEVERLQK---VYVRDPMVKAWILQQSKGICENCGKNAPFYLN 219
+++ + TL +PE S K Y P A +L++ KGIC C ++ F +
Sbjct: 261 TEIKRHTLVKPEASPYDGNWTYWSKRRGTYTGTPTRVAKLLKKQKGICPQCKQH--FTPD 318
Query: 220 DGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
D +EV H+IP S GG D +N AL +CH
Sbjct: 319 D---LIEVDHIIPKSKGGKDEFNNLQALHRHCH 348
>UniRef100_Q4C5H9 RNA-directed DNA polymerase n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4C5H9_CROWT
Length = 594
Score = 43.1 bits (100), Expect = 0.027
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 152 TDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKV---YVRDPMVKAWILQQSKGICE 208
T + SL +K+++ L +PE S K Y P + +L++ KG C
Sbjct: 465 TKEISLYYHAETKIMRHQLVKPEASYYDGNWSYWSKRRGNYTGTPTSVSKLLKKQKGRCP 524
Query: 209 NCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
C ++ F +D +EV H+IP S GG DT +N AL +CH
Sbjct: 525 QCKQH--FTPDD---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 563
>UniRef100_Q4C2F9 HNH endonuclease n=1 Tax=Crocosphaera watsonii WH
8501 RepID=Q4C2F9_CROWT
Length = 165
Score = 43.1 bits (100), Expect = 0.027
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
+Y PM + +L++ K IC C ++ F +D +EV H+IP S GG D DN AL
Sbjct: 75 IYTGTPMRVSKLLKKQKDICPICKQH--FTPDD---LIEVDHIIPKSKGGKDRYDNLQAL 129
Query: 248 CPNCH 252
+CH
Sbjct: 130 HRHCH 134
>UniRef100_Q4C286 RNA-directed DNA polymerase (Reverse
transcriptase):HNH endonuclease n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4C286_CROWT
Length = 441
Score = 43.1 bits (100), Expect = 0.027
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P A +L++ KGIC C ++ F D +EV H+IP S GG DT +N AL +CH
Sbjct: 373 PTRVAKLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGLDTYNNLQALHRHCH 427
>UniRef100_C2AHV9 Restriction endonuclease n=1 Tax=Thermomonospora
curvata DSM 43183 RepID=C2AHV9_THECU
Length = 146
Score = 43.1 bits (100), Expect = 0.027
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R P + + + +G+C CGK P V H++PLS GG DT +N V C
Sbjct: 65 RPPWSRRGVRLRDRGLCAYCGK----------PGNTVDHIVPLSRGGGDTWENTVLACGR 114
Query: 251 CH 252
C+
Sbjct: 115 CN 116
>UniRef100_Q67M53 Conserved domain protein n=1 Tax=Symbiobacterium
thermophilum RepID=Q67M53_SYMTH
Length = 270
Score = 42.7 bits (99), Expect = 0.036
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EG + VE + Y RDP + ++ C CG N Y G ++EVHHV P
Sbjct: 151 EGRIEGGVVEYYGRRYERDPENRRRAIEIHGLNCVVCGFNFEEVYGPRGRDFIEVHHVKP 210
Query: 233 LSS--GGADTTD---NCVALCPNCHRELH 256
L + G A D + V +C NCHR +H
Sbjct: 211 LKAFEGVAQVVDPKVDLVPICANCHRMIH 239
>UniRef100_Q2JH75 HNH endonuclease domain protein n=2
Tax=Synechococcus RepID=Q2JH75_SYNJB
Length = 84
Score = 42.7 bits (99), Expect = 0.036
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
V+ ++ Q+ C CGK+ P L++ H+IP++ GG++ N LC C+R
Sbjct: 16 VREYVFQRDGFRCRGCGKSPP------EVQLQIDHIIPIAQGGSNDISNLQTLCKTCNR 68
>UniRef100_B7JSJ9 DNA helicase, putative n=1 Tax=Bacillus cereus
AH820 RepID=B7JSJ9_BACC0
Length = 278
Score = 42.7 bits (99), Expect = 0.036
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 207 CENCGKNAPFYL--NDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKEL 264
C+ CG + N +EV H+I S GG +T DN LCPNCH +K + +
Sbjct: 196 CQVCGFKEEYIKANNKKGWIIEVDHIIEKSKGGGETFDNLWVLCPNCH-----AKKTRGI 250
Query: 265 IEM 267
IE+
Sbjct: 251 IEI 253
>UniRef100_Q4C739 RNA-directed DNA polymerase (Reverse
transcriptase):HNH endonuclease n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4C739_CROWT
Length = 596
Score = 42.7 bits (99), Expect = 0.036
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y P A +L++ KGIC C + F D +EV H+IP S GG DT +N AL
Sbjct: 507 YSGTPTRVAKLLKKQKGICPQCKQY--FTPED---LIEVDHIIPKSKGGKDTYNNLQALH 561
Query: 249 PNCH 252
+CH
Sbjct: 562 RDCH 565
>UniRef100_Q4C2M6 RNA-directed DNA polymerase (Reverse
transcriptase):HNH endonuclease n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4C2M6_CROWT
Length = 596
Score = 42.7 bits (99), Expect = 0.036
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y P A +L++ KGIC C + F D +EV H+IP S GG DT +N AL
Sbjct: 507 YSGTPTRVAKLLKKQKGICPQCKQY--FTPED---LIEVDHIIPKSKGGKDTYNNLQALH 561
Query: 249 PNCH 252
+CH
Sbjct: 562 RHCH 565
>UniRef100_Q4C2H4 HNH endonuclease n=1 Tax=Crocosphaera watsonii WH
8501 RepID=Q4C2H4_CROWT
Length = 95
Score = 42.7 bits (99), Expect = 0.036
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y P A +L++ KGIC C ++ F +D +EV H+IP S GG D +N AL
Sbjct: 6 YTGTPTRVAKLLKKQKGICPQCKQH--FTPDD---LIEVDHIIPKSKGGKDEFNNLQALH 60
Query: 249 PNCH 252
+CH
Sbjct: 61 RHCH 64
>UniRef100_Q4C1P0 RNA-directed DNA polymerase (Reverse
transcriptase):HNH endonuclease n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4C1P0_CROWT
Length = 596
Score = 42.7 bits (99), Expect = 0.036
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y P A +L++ KGIC C + F D +EV H+IP S GG DT +N AL
Sbjct: 507 YSGTPTRVAKLLKKQKGICPQCKQY--FTPED---LIEVDHIIPKSKGGKDTYNNLQALH 561
Query: 249 PNCH 252
+CH
Sbjct: 562 RHCH 565
>UniRef100_Q4BYS8 RNA-directed DNA polymerase (Reverse
transcriptase):HNH endonuclease n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4BYS8_CROWT
Length = 596
Score = 42.7 bits (99), Expect = 0.036
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y P A +L++ KGIC C + F D +EV H+IP S GG DT +N AL
Sbjct: 507 YSGTPTRVAKLLKKQKGICPQCKQY--FTPED---LIEVDHIIPKSKGGKDTYNNLQALH 561
Query: 249 PNCH 252
+CH
Sbjct: 562 RHCH 565
>UniRef100_Q4BUJ8 HNH endonuclease n=1 Tax=Crocosphaera watsonii WH
8501 RepID=Q4BUJ8_CROWT
Length = 116
Score = 42.7 bits (99), Expect = 0.036
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y P A +L++ KGIC C + F D +EV H+IP S GG DT +N AL
Sbjct: 27 YSGTPTRVAKLLKKQKGICPQCKQY--FTPED---LIEVDHIIPKSKGGKDTYNNLQALH 81
Query: 249 PNCH 252
+CH
Sbjct: 82 RHCH 85
>UniRef100_C3H0B3 Putative uncharacterized protein n=1 Tax=Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1
RepID=C3H0B3_BACTU
Length = 130
Score = 42.7 bits (99), Expect = 0.036
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 200 LQQSKGICENCGKNA-PFYLNDGNPYLEVHHVIPLSS---GGADTTDNCVALCPNCHREL 255
L K CE CG + Y G ++E HH +P+S G ++ + +C NCHR L
Sbjct: 52 LHGGKLFCEVCGFDFYKAYGELGKDFIEGHHTVPVSELKEGSVTKVEDIIMVCANCHRVL 111
Query: 256 HYSKN--AKELIEML 268
H K +KE +++L
Sbjct: 112 HRKKPWLSKEELQLL 126
>UniRef100_B0VJM1 Putative ATP dependant helicase yprA n=1
Tax=Candidatus Cloacamonas acidaminovorans
RepID=B0VJM1_9BACT
Length = 863
Score = 42.7 bits (99), Expect = 0.036
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Query: 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPL----SSGGADTTDNCVALCPNCHR 253
I Q+ C NCG LEVHH+IP A+ DN VALCP CHR
Sbjct: 690 IRQRDNYHCRNCGATGD---------LEVHHIIPFRRFEDPAEANEPDNLVALCPRCHR 739
>UniRef100_A7C7H9 HNH endonuclease n=1 Tax=Beggiatoa sp. PS
RepID=A7C7H9_9GAMM
Length = 101
Score = 42.7 bits (99), Expect = 0.036
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 216 FYLNDGNPYLEVHHVIPLS----SGGADTTDNCVALCPNCHRELHYSK---NAKELIEML 268
FY + G Y+ VHH+IPL+ D + V LCPNCH +H ++ ++L E L
Sbjct: 29 FYGSIGKKYIHVHHIIPLAEIKKEYQLDPLKDLVPLCPNCHAMIHRTQPTLTIQQLKEYL 88
Query: 269 YVNINRLQK 277
N QK
Sbjct: 89 AENGKNTQK 97
>UniRef100_B9ZDV6 HNH endonuclease n=1 Tax=Natrialba magadii ATCC
43099 RepID=B9ZDV6_NATMA
Length = 282
Score = 42.7 bits (99), Expect = 0.036
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 200 LQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSK 259
L++ C CG + + L+ HH++P S+GG D +N + LC CH +H
Sbjct: 67 LRRDNYACTRCGAD--------DRTLQAHHIVPRSAGGPDELENLLTLCRPCHGVIHQHN 118
Query: 260 NA 261
+A
Sbjct: 119 SA 120
>UniRef100_Q8YYJ2 Alr0856 protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YYJ2_ANASP
Length = 181
Score = 42.4 bits (98), Expect = 0.046
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 12/75 (16%)
Query: 178 KPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGG 237
K VER KV P+ + IL++ C+ CG +L + HVIP S GG
Sbjct: 68 KITSVERTWKV---PPVNRREILRRDHHSCQYCGSRK---------HLTLDHVIPRSRGG 115
Query: 238 ADTTDNCVALCPNCH 252
+ T DN VA C C+
Sbjct: 116 SHTWDNVVAACERCN 130
>UniRef100_Q73EG9 HNH endonuclease domain protein n=1 Tax=Bacillus
cereus ATCC 10987 RepID=Q73EG9_BACC1
Length = 119
Score = 42.4 bits (98), Expect = 0.046
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 16/82 (19%)
Query: 181 EVERLQKVYVRDPMVK-----AWILQQSKGI-----CENCGKNAPFYLNDGNPYLEVHHV 230
E R +K Y RDP + AW + I CE C + P EVHH+
Sbjct: 30 EAARYEK-YDRDPATRKRYGRAWKRIRDSYIAAHPLCEECKRQGKL-----TPANEVHHI 83
Query: 231 IPLSSGGADTTDNCVALCPNCH 252
+PL+ GG N +ALC CH
Sbjct: 84 LPLARGGTHDRSNLMALCTPCH 105
>UniRef100_Q6LSI1 Putative uncharacterized protein MLL7993 n=1
Tax=Photobacterium profundum RepID=Q6LSI1_PHOPR
Length = 207
Score = 42.4 bits (98), Expect = 0.046
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 171 SQPEGSRKPVEVERLQKVYVRD-------PMVKAWILQQSKGI-CENCGKN-APFYLNDG 221
S PEG R VER K Y+R+ K + L+ + + CE CG + Y G
Sbjct: 99 SFPEGKR----VER--KHYLRERSSALVEKAKKEYALKNNGRLPCEVCGFDFRECYGFHG 152
Query: 222 NPYLEVHHVIPLS-----SGGADTTDNCVALCPNCHRELH 256
+ Y+E HH++PLS G ++ +C NCHR LH
Sbjct: 153 DSYIEAHHIVPLSELCSADGTKTRLEDLAMVCSNCHRMLH 192
>UniRef100_Q21AN9 HNH endonuclease n=1 Tax=Rhodopseudomonas
palustris BisB18 RepID=Q21AN9_RHOPB
Length = 200
Score = 42.4 bits (98), Expect = 0.046
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
L++HH+ +S+GG D + N +ALCP CH H
Sbjct: 39 LDMHHIWEVSAGGTDDSSNLIALCPTCHALYH 70
>UniRef100_B7K683 HNH endonuclease n=1 Tax=Cyanothece sp. PCC 8801
RepID=B7K683_CYAP8
Length = 80
Score = 42.4 bits (98), Expect = 0.046
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
V+ ++ Q+ C++CGKN L V H+IPL+ GG++ N LC C+++
Sbjct: 13 VREYVFQRDNYNCQSCGKNKQ------QVTLNVDHIIPLAKGGSNDISNLQTLCKQCNQK 66
>UniRef100_B4SCA5 HNH nuclease n=1 Tax=Pelodictyon
phaeoclathratiforme BU-1 RepID=B4SCA5_PELPB
Length = 340
Score = 42.4 bits (98), Expect = 0.046
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 153 DDESLLNMRVSKLIKKTLSQPEGSRKPVEVERL---QKVYVRDPMVKAWILQQSKGICEN 209
+ E L IK+ + + +P + E + +K Y RD A I C+
Sbjct: 205 EQEELAQFYKQAKIKEEILDELNNLQPSDSEEIIVNKKTYKRDNKTIAQIKILRDFKCQI 264
Query: 210 CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
CG D + Y+E H+ G +T DN + LCPN H+E
Sbjct: 265 CG--VTITKKDRSKYIEAAHIKAKHQKGRETIDNIILLCPNHHKE 307
>UniRef100_B2JR48 Putative uncharacterized protein n=1
Tax=Burkholderia phymatum STM815 RepID=B2JR48_BURP8
Length = 106
Score = 42.4 bits (98), Expect = 0.046
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
V++W +C CG+ P D HH++P + GG +T VAL CHR+
Sbjct: 6 VQSWYRPPQDEVCPLCGRTIPPEQRDE------HHMVPKAEGGRET----VALHRICHRQ 55
Query: 255 LHYSKNAKELIEMLYVNINRL 275
LH + +EL Y +++RL
Sbjct: 56 LHALFSEREL-ATTYASVDRL 75
>UniRef100_A9B2D5 HNH endonuclease n=1 Tax=Herpetosiphon aurantiacus
ATCC 23779 RepID=A9B2D5_HERA2
Length = 321
Score = 42.4 bits (98), Expect = 0.046
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
VK + Q+ +G C CG + YLE H+IP S GGA+T N LC C+
Sbjct: 266 VKLAVWQRDQGKCTQCGDAS---------YLEFDHIIPHSKGGANTVGNVQLLCRKCN 314
>UniRef100_A4G659 Putative restriction endonuclease n=1
Tax=Herminiimonas arsenicoxydans RepID=A4G659_HERAR
Length = 269
Score = 42.4 bits (98), Expect = 0.046
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGAD---TTDNCVALCPNCHRELH 256
C+ C KN F G Y+E HH IP+SS + + + LCPNCH+ +H
Sbjct: 194 CDVCQKN--FEKEYGVKYIEAHHKIPISSFSSKHPVKSSDFALLCPNCHKAIH 244
>UniRef100_A0QDE3 HNH endonuclease family protein n=2
Tax=Mycobacterium avium RepID=A0QDE3_MYCA1
Length = 215
Score = 42.4 bits (98), Expect = 0.046
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R PM +A ++ + + C CG A V HV+P S GG + +NCVA C
Sbjct: 115 RVPMTRAALMHRDRFCCAYCGAKAD----------TVDHVVPRSRGGDHSWENCVACCST 164
Query: 251 C-HRE 254
C HR+
Sbjct: 165 CNHRK 169
>UniRef100_Q1PZ76 Conserved hypothetical endonuclease protein n=1
Tax=Candidatus Kuenenia stuttgartiensis
RepID=Q1PZ76_9BACT
Length = 118
Score = 42.4 bits (98), Expect = 0.046
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 198 WILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
W+ + S+GIC C K L + HV+PLS GG T N V C C+ + Y
Sbjct: 30 WLNKISRGICHYCQKTF------SPDKLTMDHVVPLSRGGRSTKGNIVPCCKECNNKKKY 83
Query: 258 SKNAKELIEML 268
A+ ++ L
Sbjct: 84 LTPAEIVLNKL 94
>UniRef100_B9NZ87 HNH nuclease n=1 Tax=Prochlorococcus marinus str.
MIT 9202 RepID=B9NZ87_PROMA
Length = 132
Score = 42.4 bits (98), Expect = 0.046
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
V++ D K + Q K I GK+ + G P + HV+P S GG TT+NCV
Sbjct: 7 VFLEDLCPKFRLRQWRKSIHRFTGKSCIYC---GKPSESIDHVLPRSQGGLSTTENCVPA 63
Query: 248 CPNCH 252
C +C+
Sbjct: 64 CLSCN 68
>UniRef100_B4AYW5 HNH endonuclease n=1 Tax=Cyanothece sp. PCC 7822
RepID=B4AYW5_9CHRO
Length = 80
Score = 42.4 bits (98), Expect = 0.046
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P V+ ++ Q+ C +CGK A L + H+IPL+ GG++ N LC C+
Sbjct: 11 PEVRKYVYQRDNYQCRSCGKTAT------ETSLNIDHIIPLAKGGSNDISNLQTLCQTCN 64
Query: 253 R 253
+
Sbjct: 65 Q 65
>UniRef100_A6FSB3 HNH nuclease n=1 Tax=Roseobacter sp. AzwK-3b
RepID=A6FSB3_9RHOB
Length = 115
Score = 42.4 bits (98), Expect = 0.046
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 196 KAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
+AW ++++G CE CG LN G+ E H IP GG ++ +NCV LC CH +
Sbjct: 13 QAW--ERARGKCEECGVK----LNVGDRR-EFDHRIPCGLGGDNSLENCVVLCAACHSD 64
>UniRef100_A4F3L2 Putative uncharacterized protein ORF6 n=1
Tax=Planktothrix agardhii NIVA-CYA 126
RepID=A4F3L2_OSCAG
Length = 428
Score = 42.4 bits (98), Expect = 0.046
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y P + ++++ KGIC +CG Y + + +EV H+ P S GG DT DN L
Sbjct: 343 YPETPTRVSKLIKKQKGICPHCG----LYFSSTD-IVEVDHIQPTSLGGKDTYDNLQLLH 397
Query: 249 PNCH 252
+CH
Sbjct: 398 KHCH 401
>UniRef100_A4BER6 Putative uncharacterized protein n=1 Tax=Reinekea
sp. MED297 RepID=A4BER6_9GAMM
Length = 446
Score = 42.4 bits (98), Expect = 0.046
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 227 VHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+HHV+ GG+D DN V L PNCHR+ H
Sbjct: 413 IHHVVEKHRGGSDQLDNLVLLHPNCHRQFH 442
>UniRef100_A3YTT4 Putative uncharacterized protein n=1
Tax=Synechococcus sp. WH 5701 RepID=A3YTT4_9SYNE
Length = 725
Score = 42.4 bits (98), Expect = 0.046
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
VK +L +++G CE CG + + LEV H+IP + GG+D N ALC C+
Sbjct: 188 VKYRVLTRARGRCECCGAH------EHQRALEVDHIIPKNQGGSDAITNLQALCFRCN 239
>UniRef100_Q8HA82 Sb56 n=2 Tax=root RepID=Q8HA82_9CAUD
Length = 116
Score = 42.4 bits (98), Expect = 0.046
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 194 MVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
+++A +L++ KG+C+ C ++ V H+IP + GG DT N +LC CH+
Sbjct: 53 VIRARVLKRDKGLCQLCLRSGVV-----REAKTVDHIIPKAHGGTDTDSNLQSLCWPCHK 107
Query: 254 ELHYSKNAKELIE 266
+K A+E ++
Sbjct: 108 ----AKTARERLK 116
>UniRef100_Q6UAS2 Gp60 n=1 Tax=Klebsiella phage phiKO2
RepID=Q6UAS2_9CAUD
Length = 120
Score = 42.4 bits (98), Expect = 0.046
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 194 MVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
+++A ILQ+ K +C+NC + V H+IP + GG D N +LC CHR
Sbjct: 57 IIRARILQRDKYLCQNCRRQGI-----AAKATSVDHIIPKAHGGTDDDSNLESLCWPCHR 111
>UniRef100_A5YK77 Gp109 n=1 Tax=Mycobacterium phage Tweety
RepID=A5YK77_9CAUD
Length = 108
Score = 42.4 bits (98), Expect = 0.046
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
C++CG A G+ L H+ P S GGADT DN LC CH
Sbjct: 54 CQSCGHTA----TPGSGQLHADHIQPRSRGGADTLDNMRTLCKACH 95
>UniRef100_Q8YZ58 Asl0629 protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YZ58_ANASP
Length = 81
Score = 42.0 bits (97), Expect = 0.061
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P V+ ++ Q+ K C++CGK L + H+IPL+ GG + N LC +C+
Sbjct: 11 PEVRQYVFQRDKFQCQSCGKTGL------ETNLTIDHIIPLARGGQNDISNLHTLCFDCN 64
Query: 253 R 253
R
Sbjct: 65 R 65
>UniRef100_Q7V3P2 HNH endonuclease:HNH nuclease n=1
Tax=Prochlorococcus marinus subsp. pastoris str.
CCMP1986 RepID=Q7V3P2_PROMP
Length = 134
Score = 42.0 bits (97), Expect = 0.061
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
V++ D K + Q K I GK+ + G P + HV+P S GG TT+NCV
Sbjct: 7 VFLEDLCPKFRLRQWRKSIHTFTGKSCIYC---GKPSESIDHVLPRSQGGLSTTENCVPA 63
Query: 248 CPNCH 252
C +C+
Sbjct: 64 CLSCN 68
>UniRef100_Q02TI9 Putative reverse transcriptase n=1 Tax=Pseudomonas
aeruginosa UCBPP-PA14 RepID=Q02TI9_PSEAB
Length = 561
Score = 42.0 bits (97), Expect = 0.061
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPL 233
E + + ER+ K ++ L Q KG+C C N P G HH++
Sbjct: 474 EAIGEKLRTERMLKKLKYRTQIRNLYLSQ-KGLCSLC--NQPITRETG---WHDHHILYR 527
Query: 234 SSGGADTTDNCVALCPNCHRELH 256
S GG D+ +N V L P CH++LH
Sbjct: 528 SQGGGDSLENRVLLHPACHQQLH 550
>UniRef100_B2HNH7 Putative uncharacterized protein n=1
Tax=Mycobacterium marinum M RepID=B2HNH7_MYCMM
Length = 213
Score = 42.0 bits (97), Expect = 0.061
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R PM +A ++ + + C CG A V HV+P S GG + +NCVA C
Sbjct: 113 RVPMTRAALMHRDRFCCAYCGAKAD----------TVDHVVPRSRGGEHSWENCVACCSA 162
Query: 251 C-HRE 254
C HR+
Sbjct: 163 CNHRK 167
>UniRef100_A0PU44 Putative uncharacterized protein n=1
Tax=Mycobacterium ulcerans Agy99 RepID=A0PU44_MYCUA
Length = 213
Score = 42.0 bits (97), Expect = 0.061
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R PM +A ++ + + C CG A V HV+P S GG + +NCVA C
Sbjct: 113 RVPMTRAALMHRDRFCCAYCGAKAD----------TVDHVVPRSRGGEHSWENCVACCSA 162
Query: 251 C-HRE 254
C HR+
Sbjct: 163 CNHRK 167
>UniRef100_C1SP87 Predicted restriction endonuclease n=1
Tax=Denitrovibrio acetiphilus DSM 12809
RepID=C1SP87_9BACT
Length = 244
Score = 42.0 bits (97), Expect = 0.061
Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 10/109 (9%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EG++ V V +Y RD + L+ C CG N Y G ++ HH+ P
Sbjct: 141 EGAKTTVTVN----IYERDHDARTKCLESQGCTCSVCGFNFEQAYGLMGIDFIHTHHITP 196
Query: 233 LSSGGA----DTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
S D + V LCPNCH +H K+ IE L + R K
Sbjct: 197 PSEIDKNYIPDPAKDLVPLCPNCHAMIH-RKSPPYTIEQLRAKLRRKVK 244
>UniRef100_B9APN7 Putative uncharacterized protein n=1
Tax=Prevotella copri DSM 18205 RepID=B9APN7_9BACT
Length = 251
Score = 42.0 bits (97), Expect = 0.061
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 172 QPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN--APFYLNDGNPYLEVHH 229
+ EG RK + E V R+P ++ L + C+ CG + + G ++EVHH
Sbjct: 133 ETEGERKHILKET--DVIRRNPQLRQMCLDKYGYQCQCCGMDFEETYGKELGVNFMEVHH 190
Query: 230 VIPLSSGGADTT-----DNCVALCPNCHRELHYSKNAK 262
+ +S+ D +N V LC NCH +H+ K+++
Sbjct: 191 IRMISTYETDGVPENFLENLVPLCSNCHSMIHHIKDSE 228
>UniRef100_B4AXL5 HNH endonuclease n=1 Tax=Cyanothece sp. PCC 7822
RepID=B4AXL5_9CHRO
Length = 83
Score = 42.0 bits (97), Expect = 0.061
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P KA++L++ KG C CG + +G+ +E H+IP GG ++ DN L H
Sbjct: 8 PAEKAYLLKKQKGRCAECG----LHFQEGD-LIETDHIIPKFKGGKNSKDNKQLL----H 58
Query: 253 RELHYSKNAKEL 264
R H K A+++
Sbjct: 59 RHCHDLKTAQDI 70
>UniRef100_A9GYN9 Putative uncharacterized protein n=1
Tax=Roseobacter litoralis Och 149 RepID=A9GYN9_9RHOB
Length = 311
Score = 42.0 bits (97), Expect = 0.061
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 206 ICENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTTDN----CVALCPNCHRELHYSKN 260
IC CG + A FY G ++ VHH+ P+S A + V +CPNCH +H
Sbjct: 240 ICIVCGFDFAAFYGTLGEGFIHVHHLNPISEAEASRIVSPEIDLVPVCPNCHSMIHRGGQ 299
Query: 261 AKELIEM 267
+ + EM
Sbjct: 300 TRSIAEM 306
>UniRef100_A3X5U3 Putative uncharacterized protein n=1
Tax=Roseobacter sp. MED193 RepID=A3X5U3_9RHOB
Length = 275
Score = 42.0 bits (97), Expect = 0.061
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCG-KNAPFYLNDGNPYLEVHHVIP 232
EG+ KP V R + R+P + ++ C CG + Y +D +EVHH+ P
Sbjct: 171 EGAIKPSLVNRRE----RNPRNRLLCIRLHGETCAACGLEPRRRYGDDAGGIIEVHHLEP 226
Query: 233 LSSGGA----DTTDNCVALCPNCHRELH 256
L++ A D + + LCP+CHR H
Sbjct: 227 LANIAAPKPYDPATDLLPLCPSCHRAAH 254
>UniRef100_A1ZX32 RNA-directed DNA polymerase n=1 Tax=Microscilla
marina ATCC 23134 RepID=A1ZX32_9SPHI
Length = 577
Score = 42.0 bits (97), Expect = 0.061
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 172 QPEGSRKPVEVERL-------QKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPY 224
Q G + P + + L K DP KA +L++ KG CE+CG + + +
Sbjct: 491 QVRGGKSPFDGDELYWSRRIGDKYKTYDPQ-KARLLKKQKGRCEHCGLSF-----NPDDI 544
Query: 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+E HH+ P GG++ N + + CH ++H
Sbjct: 545 IEKHHLKPKVKGGSNADKNLILVHLYCHDQIH 576
>UniRef100_Q9RZ97 TerF-related protein n=1 Tax=Deinococcus
radiodurans RepID=Q9RZ97_DEIRA
Length = 579
Score = 41.6 bits (96), Expect = 0.079
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQ 202
G ++ QP + L V ++ K+ L P+G + + + VK + Q+
Sbjct: 482 GTYHDVPQPLILAATLEALV-RIHKRLLLMPQGEKASRSIPQ---------KVKLEVWQR 531
Query: 203 SKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+G C CG D N YLE HVIP S GGA + N LC C+
Sbjct: 532 DQGQCVECG--------DTN-YLEFDHVIPHSLGGASSVGNLQLLCRRCN 572
>UniRef100_Q3M4C7 HNH endonuclease n=1 Tax=Anabaena variabilis ATCC
29413 RepID=Q3M4C7_ANAVT
Length = 81
Score = 41.6 bits (96), Expect = 0.079
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P V+ ++ Q+ K C++CGK L + H+IPL+ GG + N LC +C+
Sbjct: 11 PEVRQYVFQRDKFQCQSCGKTGL------EADLTIDHIIPLARGGQNDMSNLHTLCFDCN 64
Query: 253 R 253
R
Sbjct: 65 R 65
>UniRef100_Q31DF3 HNH nuclease n=1 Tax=Prochlorococcus marinus str.
MIT 9312 RepID=Q31DF3_PROM9
Length = 133
Score = 41.6 bits (96), Expect = 0.079
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
V++ D K Q K I GK+ + G P + HV+P S GG TT+NCV
Sbjct: 7 VFLEDLCPKFRFRQWRKSIHRFTGKSCIYC---GKPSESIDHVLPRSQGGLSTTENCVPA 63
Query: 248 CPNCH 252
C +C+
Sbjct: 64 CLSCN 68
>UniRef100_B0RAZ3 Putative uncharacterized protein n=1
Tax=Clavibacter michiganensis subsp. sepedonicus
RepID=B0RAZ3_CLAMS
Length = 227
Score = 41.6 bits (96), Expect = 0.079
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R P+ + +L++ G C C +NA + HV+P S GG DT +N VA C +
Sbjct: 129 RVPVSRRGVLRRDGGRCAYCARNAT----------TIDHVLPRSRGGKDTWENLVACCLS 178
Query: 251 CH 252
C+
Sbjct: 179 CN 180
>UniRef100_A9B5H7 HNH endonuclease n=1 Tax=Herpetosiphon aurantiacus
ATCC 23779 RepID=A9B5H7_HERA2
Length = 223
Score = 41.6 bits (96), Expect = 0.079
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 168 KTLSQPEGSRKPVE----VERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNP 223
K ++P G+R ++R+Q RD V +W+ C+ CG +
Sbjct: 101 KVNNKPAGNRLTRRTINTIDRIQ----RDTKVSSWVKYIYNYACQICGIR--LQIGQDKF 154
Query: 224 YLEVHHVIPLSS--GGADTTDNCVALCPNCHRELHY 257
Y E HH+ PL G D +N + +CPN H L Y
Sbjct: 155 YAECHHIRPLGGVHQGEDIVENVLCVCPNHHALLDY 190
>UniRef100_A8ZX65 HNH endonuclease n=1 Tax=Desulfococcus oleovorans
Hxd3 RepID=A8ZX65_DESOH
Length = 92
Score = 41.6 bits (96), Expect = 0.079
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 184 RLQKVYVRDPMVKAWILQQ-SKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
R +K RD W Q+ +KG C CGK PF + L + HV+PLS GG T
Sbjct: 8 RREKNKARDLRQTQWWKQRLAKGTCYYCGK--PFRPAE----LTMDHVVPLSRGGKTTKG 61
Query: 243 NCVALCPNCHRE 254
N V C +C+ +
Sbjct: 62 NVVPACKSCNTQ 73
>UniRef100_A8LGA4 Stress protein n=1 Tax=Frankia sp. EAN1pec
RepID=A8LGA4_FRASN
Length = 560
Score = 41.6 bits (96), Expect = 0.079
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VKA + Q+ G C C YLE HVIP S GGA + +N LC C+ E
Sbjct: 505 VKAEVWQRDGGACVQC---------QATEYLEFDHVIPHSRGGASSVNNLQLLCRRCNLE 555
>UniRef100_A5CTW1 Putative restriction endonuclease n=1
Tax=Clavibacter michiganensis subsp. michiganensis NCPPB
382 RepID=A5CTW1_CLAM3
Length = 165
Score = 41.6 bits (96), Expect = 0.079
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R P+ + +L++ G C C +NA + HV+P S GG DT +N VA C +
Sbjct: 67 RVPVSRRGVLRRDGGRCAYCARNAT----------TIDHVLPRSRGGKDTWENLVACCLS 116
Query: 251 CH 252
C+
Sbjct: 117 CN 118
>UniRef100_A0R1B7 HNH endonuclease family protein n=1
Tax=Mycobacterium smegmatis str. MC2 155
RepID=A0R1B7_MYCS2
Length = 192
Score = 41.6 bits (96), Expect = 0.079
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R PM +A ++ + + C CG A V HV+P S GG + +NCVA C
Sbjct: 92 RVPMTRAALMHRDRFRCAYCGGRAD----------TVDHVVPRSRGGEHSWENCVAACAT 141
Query: 251 C-HRE 254
C HR+
Sbjct: 142 CNHRK 146
>UniRef100_Q8VUW2 Putative uncharacterized protein
5'-methylcytosine-specific restiction enxyme A of
Methanosarcima mazei n=1 Tax=Staphylococcus hominis
RepID=Q8VUW2_STAHO
Length = 211
Score = 41.6 bits (96), Expect = 0.079
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 207 CENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTTDN----CVALCPNCHRELHYSKNA 261
C+ CG N Y N G ++E+HH+ P+ + N + LC NCH+ +H SK
Sbjct: 138 CKVCGFNFEKKYGNIGKNFIEIHHIKPMYDIRKEILVNPQTDLIPLCSNCHKMIHRSKRK 197
Query: 262 KELIEML 268
IE L
Sbjct: 198 PYTIEQL 204
>UniRef100_Q8VTF0 Putative HP0052-like protein n=1 Tax=Helicobacter
pylori RepID=Q8VTF0_HELPY
Length = 408
Score = 41.6 bits (96), Expect = 0.079
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 215 PFYLNDGNP---YLEVHHVIPLSSGGA-DTTDNCVALCPNCHRELHYSKNAKELIEMLYV 270
P Y NP Y E+HHV+ L D +N LCP CHR L + +E + L
Sbjct: 315 PLYKITQNPNSYYTEIHHVVSLGKNKELDVLENLAKLCPTCHRALKKGSSEEEFQKRLIR 374
Query: 271 NI 272
NI
Sbjct: 375 NI 376
>UniRef100_Q8VTD5 Putative HP0052-like protein n=1 Tax=Helicobacter
pylori RepID=Q8VTD5_HELPY
Length = 408
Score = 41.6 bits (96), Expect = 0.079
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 215 PFYLNDGNP---YLEVHHVIPLSSGGA-DTTDNCVALCPNCHRELHYSKNAKELIEMLYV 270
P Y NP Y E+HHV+ L D +N LCP CHR L + +E + L
Sbjct: 315 PLYKITQNPNSYYTEIHHVVSLGKNKELDVLENLAKLCPTCHRALKKGSSEEEFQKRLIR 374
Query: 271 NI 272
NI
Sbjct: 375 NI 376
>UniRef100_Q4MK42 Putative uncharacterized protein n=1 Tax=Bacillus
cereus G9241 RepID=Q4MK42_BACCE
Length = 508
Score = 41.6 bits (96), Expect = 0.079
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLND-GNPYLEVHHVIP 232
EG+ K V V VY R+P+ + ++ C C N D G ++ VHH+
Sbjct: 407 EGATKQVAVN----VYERNPVARRKCIEHYGCSCVVCDFNFERTYGDLGKDFIHVHHLKE 462
Query: 233 LSSGG----ADTTDNCVALCPNCHRELHYSKNAKELIEM 267
L + G D + +CPNCH LH K A + E+
Sbjct: 463 LHTIGEEYEVDPITDLRPVCPNCHAMLHKRKPAYSIEEL 501
>UniRef100_C2XQ54 HNH endonuclease n=1 Tax=Bacillus cereus AH603
RepID=C2XQ54_BACCE
Length = 281
Score = 41.6 bits (96), Expect = 0.079
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 207 CENCGKNAPFYL--NDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKEL 264
C+ CG + N +EV H+I S GG ++ DN LCPNCH +K + +
Sbjct: 201 CQVCGFKEEYIKANNKKGWIIEVDHIIEKSKGGGESLDNLWVLCPNCH-----AKKTRGI 255
Query: 265 IEM 267
IE+
Sbjct: 256 IEI 258
>UniRef100_C2D7Q9 Putative uncharacterized protein n=1 Tax=Atopobium
vaginae DSM 15829 RepID=C2D7Q9_9ACTN
Length = 82
Score = 41.6 bits (96), Expect = 0.079
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
P +VHH+ P++ GG +N ++LC +CH ++H
Sbjct: 4 PVEQVHHIKPIAEGGTHARENLISLCKSCHSKIH 37
>UniRef100_C1U9W9 Restriction endonuclease n=1 Tax=Eggerthella lenta
DSM 2243 RepID=C1U9W9_9ACTN
Length = 240
Score = 41.6 bits (96), Expect = 0.079
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
I+++ C+NCGK P + L++ H++P++ GG N LC C+ S
Sbjct: 180 IMERDNCTCQNCGKYMPDRVG-----LQIDHIVPVARGGKTVESNLQVLCSRCNG----S 230
Query: 259 KNAKE 263
K AKE
Sbjct: 231 KGAKE 235
>UniRef100_C1AVR9 Putative uncharacterized protein n=1
Tax=Rhodococcus opacus B4 RepID=C1AVR9_RHOOP
Length = 223
Score = 41.6 bits (96), Expect = 0.079
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R PM +A ++ + + C CG A V HV+P S GG + +NCVA C
Sbjct: 123 RVPMTRAALMHRDRFRCAYCGSKAE----------TVDHVVPRSRGGEHSWENCVACCAP 172
Query: 251 C-HRE 254
C HR+
Sbjct: 173 CNHRK 177
>UniRef100_C0EP64 Putative uncharacterized protein n=1 Tax=Neisseria
flavescens NRL30031/H210 RepID=C0EP64_NEIFL
Length = 106
Score = 41.6 bits (96), Expect = 0.079
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 226 EVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAK 262
E H++PL+ GGAD +N LC +CH E S+N +
Sbjct: 65 ECDHIVPLADGGADDVENLQTLCKDCHLEKSVSENRR 101
>UniRef100_A0YCZ6 Putative uncharacterized protein n=1 Tax=marine
gamma proteobacterium HTCC2143 RepID=A0YCZ6_9GAMM
Length = 267
Score = 41.6 bits (96), Expect = 0.079
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 166 IKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPY 224
+ K S EG+ K + V Y R+P + +++ C C + Y + G Y
Sbjct: 155 VPKDNSLKEGAAKKIWVN----AYERNPDARERCIRKWGLNCVVCNFHFEQCYGHLGKRY 210
Query: 225 LEVHHVIPLSS----GGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNIN 273
+ VHH+ PL+ + ++ +CPNCH LH +KN+ IE L +N
Sbjct: 211 IHVHHLKPLAEIQKEYEVNPEEDLRPVCPNCHSMLHRNKNSVLSIEELQTLVN 263
>UniRef100_B9LX84 HNH endonuclease n=1 Tax=Halorubrum lacusprofundi
ATCC 49239 RepID=B9LX84_HALLT
Length = 299
Score = 41.6 bits (96), Expect = 0.079
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 14/73 (19%)
Query: 184 RLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDN 243
R +KVY RD C+ CG + GN L HH P S GG+ N
Sbjct: 12 RRKKVYKRDNYR-----------CQKCGSRGG---SRGNTELHAHHKKPKSKGGSHRFSN 57
Query: 244 CVALCPNCHRELH 256
+C +CH ++H
Sbjct: 58 LTTVCKSCHEDIH 70
