Blast performed on February-2-2012
BLASTP 2.2.24+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: uniref100
15,272,341 sequences; 5,427,816,372 total letters
Query= EG10573 mcrA
Length=277
Score E
Sequences producing significant alignments: (Bits) Value
UniRef100_P24200 5-methylcytosine-specific restriction enzyme A... 574 7e-162
UniRef100_E8DA18 E14 prophage; 5-methylcytosine-specific restri... 543 1e-152
UniRef100_A9BU78 HNH endonuclease n=1 Tax=Delftia acidovorans S... 131 1e-28
UniRef100_C3K0B7 Putative 5-methylcytosine-specific restriction... 128 1e-27
UniRef100_E2XX24 HNH endonuclease n=1 Tax=Pseudomonas fluoresce... 126 3e-27
UniRef100_F9TLW9 5-methylcytosine-specific restriction protein ... 126 4e-27
UniRef100_Q6ALL3 Probable 5-methylcytosine-specific restriction... 124 2e-26
UniRef100_Q2Y8M1 HNH nuclease n=1 Tax=Nitrosospira multiformis ... 122 7e-26
UniRef100_A0KIQ7 Probable 5-methylcytosine-specific restriction... 120 2e-25
UniRef100_A9AKD6 5-methylcytosine-specific restriction enzyme A... 119 4e-25
UniRef100_B9B0B8 HNH nuclease n=1 Tax=Burkholderia multivorans ... 119 6e-25
UniRef100_B4EJL0 Putative restriction endonuclease n=1 Tax=Burk... 117 2e-24
UniRef100_A6QD09 5-methylcytosine-specific restriction enzyme A... 115 1e-23
UniRef100_Q1YK78 Putative 5-methylcytosine-specific restriction... 114 1e-23
UniRef100_F0G3M3 5-methylcytosine-specific restriction enzyme A... 114 1e-23
UniRef100_UPI00016A2859 HNH endonuclease n=1 Tax=Burkholderia t... 110 4e-22
UniRef100_G4QL11 Putative uncharacterized protein n=1 Tax=Glaci... 109 5e-22
UniRef100_Q3K870 Putative 5-methylcytosine-specific restriction... 104 2e-20
UniRef100_C2UHE5 HNH nuclease n=1 Tax=Bacillus cereus Rock1-15 ... 103 3e-20
UniRef100_B1FDV2 HNH endonuclease n=1 Tax=Burkholderia ambifari... 100 2e-19
UniRef100_C3FAM5 HNH nuclease n=1 Tax=Bacillus thuringiensis se... 100 2e-19
UniRef100_C3HSW4 HNH nuclease n=1 Tax=Bacillus thuringiensis se... 100 2e-19
UniRef100_D0KA86 HNH endonuclease n=1 Tax=Pectobacterium wasabi... 99.8 4e-19
UniRef100_D5RS39 5-methylcytosine-specific restriction enzyme A... 98.6 9e-19
UniRef100_G1W0M6 HNH endonuclease n=1 Tax=Dechlorosoma suillum ... 98.6 1e-18
UniRef100_D2C2V7 HNH endonuclease n=1 Tax=Dickeya dadantii Ech5... 98.2 1e-18
UniRef100_C2P748 HNH nuclease n=1 Tax=Bacillus cereus 172560W R... 97.8 2e-18
UniRef100_Q312Y0 HNH endonuclease n=1 Tax=Desulfovibrio alasken... 97.8 2e-18
UniRef100_D0Z3H8 HNH nuclease n=1 Tax=Photobacterium damselae s... 97.1 3e-18
UniRef100_D8D1K6 HNH endonuclease n=1 Tax=Comamonas testosteron... 97.1 3e-18
UniRef100_D7E6N9 HNH endonuclease n=1 Tax=Methanohalobium evest... 95.1 1e-17
UniRef100_C0CKB6 Putative uncharacterized protein n=1 Tax=Blaut... 94.4 2e-17
UniRef100_A2SMM5 Putative uncharacterized protein n=1 Tax=Methy... 94.4 2e-17
UniRef100_B3HG69 HNH endonuclease n=1 Tax=Escherichia coli B7A ... 94.0 2e-17
UniRef100_D8A4Z7 HNH endonuclease domain protein n=2 Tax=Escher... 94.0 3e-17
UniRef100_F0YZB4 5-methylcytosine-specific restriction enzyme A... 93.6 3e-17
UniRef100_C9PPM2 5-methylcytosine-specific restriction enzyme A... 92.8 5e-17
UniRef100_F7VFB1 Putative uncharacterized protein n=1 Tax=Aceto... 92.0 1e-16
UniRef100_G2E8M8 HNH endonuclease n=1 Tax=Thiorhodococcus drews... 91.7 1e-16
UniRef100_E8VMV6 HNH endonuclease n=1 Tax=Vibrio vulnificus MO6... 91.7 1e-16
UniRef100_A3UNY9 Putative restriction endonuclease n=1 Tax=Vibr... 91.3 2e-16
UniRef100_G4T266 HNH nuclease n=1 Tax=Methylomicrobium alcaliph... 91.3 2e-16
UniRef100_A8ZWC1 HNH endonuclease n=1 Tax=Desulfococcus oleovor... 90.9 2e-16
UniRef100_B0NHX5 Putative uncharacterized protein n=1 Tax=Clost... 90.9 2e-16
UniRef100_A6VSV6 HNH endonuclease n=1 Tax=Marinomonas sp. MWYL1... 90.9 2e-16
UniRef100_A4SC99 HNH endonuclease n=1 Tax=Chlorobium phaeovibri... 90.5 3e-16
UniRef100_C4SUH5 Restriction endonuclease n=1 Tax=Yersinia fred... 90.1 3e-16
UniRef100_A1HS87 HNH endonuclease n=1 Tax=Thermosinus carboxydi... 89.7 4e-16
UniRef100_B5EI94 HNH endonuclease n=1 Tax=Geobacter bemidjiensi... 89.7 5e-16
UniRef100_F7PHF3 HNH endonuclease n=1 Tax=Halorhabdus tiamatea ... 89.4 7e-16
UniRef100_D4M0M6 Restriction endonuclease n=1 Tax=Ruminococcus ... 89.0 7e-16
UniRef100_E1VP42 Probable endonuclease n=1 Tax=gamma proteobact... 89.0 7e-16
UniRef100_A3XSF8 HNH endonuclease n=1 Tax=Vibrio sp. MED222 Rep... 89.0 8e-16
UniRef100_C7HJ98 HNH endonuclease n=2 Tax=Clostridium thermocel... 89.0 8e-16
UniRef100_C6ANH6 HNH nuclease n=1 Tax=Aggregatibacter aphrophil... 88.6 1e-15
UniRef100_F4DT09 Putative restriction endonuclease n=1 Tax=Pseu... 87.8 2e-15
UniRef100_F2JIV4 HNH endonuclease n=1 Tax=Clostridium lentocell... 87.8 2e-15
UniRef100_A3JQK6 HNH nuclease n=1 Tax=Rhodobacteraceae bacteriu... 87.4 3e-15
UniRef100_F0HDL9 HNH endonuclease domain protein n=1 Tax=Turici... 87.0 3e-15
UniRef100_D0X1J0 Putative uncharacterized protein n=1 Tax=Vibri... 86.3 5e-15
UniRef100_G1UXR3 Putative uncharacterized protein n=1 Tax=Bilop... 86.3 5e-15
UniRef100_C2WFU8 Restriction endonuclease n=1 Tax=Bacillus cere... 86.3 5e-15
UniRef100_E6VA78 HNH nuclease n=1 Tax=Variovorax paradoxus EPS ... 85.9 6e-15
UniRef100_C2KXT9 Putative uncharacterized protein n=1 Tax=Oriba... 85.5 7e-15
UniRef100_Q1QEV2 HNH endonuclease n=1 Tax=Psychrobacter cryohal... 85.5 9e-15
UniRef100_F2G2V6 HNH nuclease n=1 Tax=Alteromonas macleodii str... 85.1 1e-14
UniRef100_C0WRI9 Possible HNH endonuclease n=1 Tax=Lactobacillu... 84.3 2e-14
UniRef100_D4SNG2 Putative restriction endonuclease n=1 Tax=Ente... 84.3 2e-14
UniRef100_A2PX36 HNH endonuclease (Fragment) n=1 Tax=Vibrio cho... 84.3 2e-14
UniRef100_C3I9U4 Restriction endonuclease n=1 Tax=Bacillus thur... 82.8 6e-14
UniRef100_F1Z2H1 HNH endonuclease domain protein n=1 Tax=Strept... 82.4 7e-14
UniRef100_C0N619 HNH endonuclease domain protein n=1 Tax=Methyl... 82.0 9e-14
UniRef100_C3C627 Restriction endonuclease n=1 Tax=Bacillus thur... 81.6 1e-13
UniRef100_E3H995 HNH endonuclease n=1 Tax=Ilyobacter polytropus... 81.3 2e-13
UniRef100_G2RPA5 HNH endonuclease n=1 Tax=Bacillus megaterium W... 80.9 2e-13
UniRef100_B7S191 HNH endonuclease domain protein n=1 Tax=marine... 80.5 2e-13
UniRef100_Q080H4 HNH endonuclease n=1 Tax=Shewanella frigidimar... 80.1 4e-13
UniRef100_Q4A110 Putative restriction endonuclease n=1 Tax=Stap... 79.7 4e-13
UniRef100_C2Z778 Restriction endonuclease n=2 Tax=Bacillus cere... 79.3 6e-13
UniRef100_D2S1X8 HNH endonuclease n=1 Tax=Haloterrigena turkmen... 79.0 7e-13
UniRef100_G0ERW2 Putative uncharacterized protein n=1 Tax=Cupri... 79.0 9e-13
UniRef100_C9BZK6 Restriction endonuclease (Fragment) n=2 Tax=En... 78.6 1e-12
UniRef100_Q0BZ66 Conserved domain protein n=1 Tax=Hyphomonas ne... 78.6 1e-12
UniRef100_C4WNE8 Putative uncharacterized protein n=1 Tax=Ochro... 77.8 2e-12
UniRef100_F9VAG0 Endonuclease n=2 Tax=Lactococcus garvieae RepI... 77.8 2e-12
UniRef100_D5DUC9 Putative uncharacterized protein n=1 Tax=Bacil... 74.3 2e-11
UniRef100_D5DGC4 Putative uncharacterized protein n=1 Tax=Bacil... 73.9 3e-11
UniRef100_F9RLP2 HNH endonuclease n=1 Tax=Vibrio scophthalmi LM... 73.6 3e-11
UniRef100_E6RKZ3 Restriction endonuclease-like protein n=1 Tax=... 72.4 7e-11
UniRef100_A9F818 Putative restriction endonuclease n=1 Tax=Phae... 71.6 1e-10
UniRef100_B5HVM7 Putative uncharacterized protein n=1 Tax=Strep... 70.5 3e-10
UniRef100_D5SZP5 Putative restriction endonuclease n=1 Tax=Leuc... 69.7 4e-10
UniRef100_UPI0002193DBB putative restriction endonuclease n=1 T... 69.7 5e-10
UniRef100_B1ZMM6 HNH endonuclease n=1 Tax=Opitutus terrae PB90-... 69.3 7e-10
UniRef100_Q1L9I8 HNH endonuclease typeIV restriction enzyme n=1... 65.1 1e-08
UniRef100_A8R8M0 Putative uncharacterized protein n=1 Tax=Eubac... 65.1 1e-08
UniRef100_Q3K789 Putative HNH endonuclease n=1 Tax=Pseudomonas ... 64.7 2e-08
UniRef100_Q9L0M9 Putative uncharacterized protein SCO4631 n=1 T... 64.3 2e-08
UniRef100_B9NKB9 Predicted protein n=1 Tax=Populus trichocarpa ... 63.5 4e-08
UniRef100_B0N4T9 Putative uncharacterized protein n=1 Tax=Clost... 63.5 4e-08
UniRef100_C2XB44 5-methylcytosine-specific restriction enzyme A... 60.8 2e-07
UniRef100_Q0KFQ5 Predicted restriction endonuclease n=1 Tax=Ral... 60.5 3e-07
UniRef100_A3US95 Putative restriction endonuclease n=1 Tax=Vibr... 60.1 4e-07
UniRef100_C2U711 Putative uncharacterized protein n=1 Tax=Bacil... 60.1 4e-07
UniRef100_C2RME9 5-methylcytosine-specific restriction enzyme A... 59.7 5e-07
UniRef100_E0ID74 Putative uncharacterized protein n=1 Tax=Paeni... 58.9 9e-07
UniRef100_D1NJY2 Transcriptional regulator, XRE family n=1 Tax=... 58.5 1e-06
UniRef100_D6X7U9 Predicted protein n=1 Tax=Streptomyces pristin... 58.5 1e-06
UniRef100_D1BJK4 HNH endonuclease n=1 Tax=Sanguibacter keddieii... 58.2 1e-06
UniRef100_A3U4A6 E14 prophage-like protein n=1 Tax=Oceanicola b... 58.2 2e-06
UniRef100_A0YK66 Putative uncharacterized protein n=1 Tax=Lyngb... 57.8 2e-06
UniRef100_E6V7F7 HNH endonuclease n=1 Tax=Variovorax paradoxus ... 57.4 2e-06
UniRef100_D3I4N4 5-methylcytosine-specific restriction enzyme A... 56.2 6e-06
UniRef100_C6LDW0 Product McrA n=1 Tax=Marvinbryantia formatexig... 55.8 6e-06
UniRef100_C8JWG9 Putative uncharacterized protein n=2 Tax=Liste... 55.5 9e-06
UniRef100_C0ZFI2 Putative uncharacterized protein n=1 Tax=Brevi... 55.5 1e-05
UniRef100_A3WFM1 5-methylcytosine-specific restriction enzyme A... 55.1 1e-05
UniRef100_Q81E47 5-methylcytosine-specific restriction enzyme A... 55.1 1e-05
UniRef100_Q723Z7 Conserved domain protein n=1 Tax=Listeria mono... 54.7 1e-05
UniRef100_F7K757 Putative uncharacterized protein n=1 Tax=Lachn... 54.7 2e-05
UniRef100_C4L074 HNH endonuclease n=1 Tax=Exiguobacterium sp. A... 54.7 2e-05
UniRef100_E3Z496 Putative recombinase (Fragment) n=1 Tax=Lister... 54.7 2e-05
UniRef100_E4ML28 HNH endonuclease n=1 Tax=Eubacterium celluloso... 54.3 2e-05
UniRef100_F4CPM0 HNH endonuclease n=1 Tax=Pseudonocardia dioxan... 53.9 3e-05
UniRef100_B5G9G0 HNH endonuclease n=1 Tax=Streptomyces sp. SPB7... 53.9 3e-05
UniRef100_Q8PRX6 5-methylcytosine-specific restriction enzyme A... 53.5 4e-05
UniRef100_B8KVR3 HNH endonuclease domain protein n=1 Tax=gamma ... 53.1 5e-05
UniRef100_A7Z277 Putative uncharacterized protein n=1 Tax=Bacil... 52.0 1e-04
UniRef100_B3CDE4 Putative uncharacterized protein n=1 Tax=Bacte... 52.0 1e-04
UniRef100_B1ZSH9 Restriction endonuclease-like protein n=1 Tax=... 51.6 1e-04
UniRef100_D6JZY9 HNH endonuclease domain-containing protein n=1... 51.6 1e-04
UniRef100_C9XQW3 Putative uncharacterized protein n=2 Tax=Clost... 51.2 2e-04
UniRef100_B0ACA5 Putative uncharacterized protein n=1 Tax=Clost... 50.8 2e-04
UniRef100_G1VR34 Putative uncharacterized protein n=1 Tax=Erysi... 50.8 2e-04
UniRef100_Q39IU3 Putative uncharacterized protein n=1 Tax=Burkh... 50.8 3e-04
UniRef100_C3GU40 HNH endonuclease n=3 Tax=Bacillus thuringiensi... 50.8 3e-04
UniRef100_D6K1C6 Putative uncharacterized protein n=1 Tax=Strep... 50.4 3e-04
UniRef100_F7NR59 Putative restriction endonuclease n=1 Tax=Rhei... 50.4 3e-04
UniRef100_E0ID72 HNH endonuclease n=1 Tax=Paenibacillus curdlan... 50.4 3e-04
UniRef100_D3MR19 Hnh n=1 Tax=Peptostreptococcus anaerobius 653-... 50.4 3e-04
UniRef100_F6DMK5 HNH endonuclease n=1 Tax=Desulfotomaculum rumi... 50.4 3e-04
UniRef100_Q6MJA3 Putative membrane protein n=1 Tax=Bdellovibrio... 50.4 3e-04
UniRef100_G2SM89 Putative uncharacterized protein n=1 Tax=Lacto... 50.1 4e-04
UniRef100_D7E996 HNH endonuclease n=1 Tax=Methanohalobium evest... 50.1 4e-04
UniRef100_B3EB35 HNH endonuclease n=1 Tax=Geobacter lovleyi SZ ... 50.1 4e-04
UniRef100_G4KTL8 Putative uncharacterized protein n=1 Tax=Oscil... 49.7 5e-04
UniRef100_F3ZWE2 HNH endonuclease n=1 Tax=Mahella australiensis... 49.7 5e-04
UniRef100_F0HET7 Putative uncharacterized protein n=1 Tax=Turic... 49.7 6e-04
UniRef100_C0QGN0 Putative 5-methylcytosine-specific restriction... 49.7 6e-04
UniRef100_C9R999 HNH endonuclease n=1 Tax=Ammonifex degensii KC... 49.3 7e-04
UniRef100_A6TVA6 HNH endonuclease n=1 Tax=Alkaliphilus metallir... 49.3 7e-04
UniRef100_Q64YP3 Putative uncharacterized protein n=1 Tax=Bacte... 49.3 7e-04
UniRef100_Q2BBA0 Putative uncharacterized protein n=1 Tax=Bacil... 49.3 8e-04
UniRef100_F9RCY3 Putative restriction endonuclease n=1 Tax=Vibr... 48.9 8e-04
UniRef100_D3A277 5-methylcytosine-specific restriction enzyme A... 48.9 9e-04
UniRef100_G0W2G9 Putative HTH-type transcriptional regulatory p... 48.5 0.001
UniRef100_Q3IBU7 Putative HNH endonuclease n=1 Tax=Pseudoaltero... 48.5 0.001
UniRef100_Q4BZL5 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 48.5 0.001
UniRef100_E2SS26 Product McrA n=1 Tax=Erysipelotrichaceae bacte... 48.5 0.001
UniRef100_Q65MN2 McrA n=1 Tax=Bacillus licheniformis ATCC 14580... 48.1 0.001
UniRef100_E0NJY1 HNH endonuclease domain protein n=1 Tax=Pepton... 48.1 0.001
UniRef100_D7E737 HNH endonuclease n=1 Tax=Methanohalobium evest... 48.1 0.001
UniRef100_G4KZY6 Putative uncharacterized protein n=1 Tax=Oscil... 48.1 0.001
UniRef100_D7E9Q6 HNH endonuclease n=1 Tax=Methanohalobium evest... 48.1 0.002
UniRef100_Q4CA22 RNA-directed DNA polymerase (Reverse transcrip... 48.1 0.002
UniRef100_F3QLA4 HNH endonuclease domain protein n=1 Tax=Parasu... 48.1 0.002
UniRef100_E2Z107 HNH endonuclease domain protein n=1 Tax=Entero... 47.8 0.002
UniRef100_E7QUJ5 HNH endonuclease domain protein n=1 Tax=Halada... 47.8 0.002
UniRef100_Q4BXV9 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 47.8 0.002
UniRef100_E9SPY9 HNH endonuclease n=1 Tax=Clostridium symbiosum... 47.8 0.002
UniRef100_D9VYU5 HNH endonuclease n=1 Tax=Streptomyces sp. C Re... 47.8 0.002
UniRef100_C9RCK4 HNH endonuclease n=1 Tax=Ammonifex degensii KC... 47.8 0.002
UniRef100_C8U495 Endonuclease-like protein n=2 Tax=Escherichia ... 47.8 0.002
UniRef100_E9YS35 HNH endonuclease n=1 Tax=Escherichia coli M863... 47.8 0.002
UniRef100_E5VYM8 HNH endonuclease n=1 Tax=Anaerostipes sp. 3_2_... 47.8 0.002
UniRef100_E4LR58 HNH endonuclease domain protein n=1 Tax=Clostr... 47.8 0.002
UniRef100_D2U9D5 Putative phage-related protein n=1 Tax=Xanthom... 47.8 0.002
UniRef100_E5W5Z5 Putative uncharacterized protein n=1 Tax=Bacil... 47.4 0.002
UniRef100_C7V3C1 Predicted protein n=1 Tax=Enterococcus faecali... 47.4 0.002
UniRef100_E6W4M4 HNH endonuclease n=1 Tax=Desulfurispirillum in... 47.4 0.002
UniRef100_G4NUB4 McrA n=1 Tax=Bacillus subtilis subsp. spizizen... 47.4 0.003
UniRef100_F0ESM3 Putative uncharacterized protein mcrA n=1 Tax=... 47.4 0.003
UniRef100_Q8DMK2 Maturase; reverse transcriptase n=1 Tax=Thermo... 47.4 0.003
UniRef100_D6S6T6 HNH endonuclease domain protein n=1 Tax=Finego... 47.0 0.003
UniRef100_F0GWG0 HNH endonuclease domain protein n=1 Tax=Anaero... 47.0 0.003
UniRef100_Q5YRW6 Putative endonuclease n=1 Tax=Nocardia farcini... 47.0 0.003
UniRef100_E8WU15 HNH endonuclease n=1 Tax=Geobacter sp. M18 Rep... 47.0 0.003
UniRef100_A0ZAT3 Putative uncharacterized protein n=1 Tax=Nodul... 47.0 0.004
UniRef100_Q4C974 RNA-directed DNA polymerase n=1 Tax=Crocosphae... 47.0 0.004
UniRef100_C9RBS6 HNH endonuclease n=1 Tax=Ammonifex degensii KC... 47.0 0.004
UniRef100_D4GRV9 HNH endonuclease domain protein n=1 Tax=Halofe... 46.6 0.004
UniRef100_F6G566 Putative uncharacterized protein n=1 Tax=Ralst... 46.6 0.004
UniRef100_F3S178 Putative uncharacterized protein n=1 Tax=Vibri... 46.6 0.004
UniRef100_Q4C8B3 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 46.6 0.004
UniRef100_Q0HF94 Putative uncharacterized protein n=1 Tax=Shewa... 46.6 0.004
UniRef100_D3LVI3 HNH endonuclease domain protein n=1 Tax=Megasp... 46.6 0.004
UniRef100_A0YT41 Putative uncharacterized protein n=1 Tax=Lyngb... 46.6 0.004
UniRef100_Q538B5 MnlI restriction endonuclease n=2 Tax=Moraxell... 46.6 0.004
UniRef100_F3AKQ4 Putative uncharacterized protein n=1 Tax=Lachn... 46.6 0.004
UniRef100_C7H8C7 Putative HNH endonuclease domain protein n=1 T... 46.6 0.005
UniRef100_E0ID66 HNH endonuclease n=1 Tax=Paenibacillus curdlan... 46.6 0.005
UniRef100_F3ZZW1 HNH endonuclease n=1 Tax=Mahella australiensis... 46.6 0.005
UniRef100_F9QCK9 Putative uncharacterized protein n=1 Tax=Mycop... 46.6 0.005
UniRef100_G2T4Q0 RNA-directed DNA polymerase n=1 Tax=Roseburia ... 46.6 0.005
UniRef100_F7R353 Recombinase n=2 Tax=Lactobacillus ruminis RepI... 46.2 0.005
UniRef100_Q46AN8 Putative uncharacterized protein n=1 Tax=Metha... 46.2 0.005
UniRef100_Q4C783 RNA-directed DNA polymerase (Reverse transcrip... 46.2 0.005
UniRef100_A0L1U4 HNH endonuclease n=1 Tax=Shewanella sp. ANA-3 ... 46.2 0.006
UniRef100_Q4C6E0 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 46.2 0.006
UniRef100_G0GVF2 HNH endonuclease n=2 Tax=Klebsiella pneumoniae... 46.2 0.006
UniRef100_C3AFV2 Putative uncharacterized protein n=1 Tax=Bacil... 46.2 0.006
UniRef100_C4L1L5 HNH endonuclease n=1 Tax=Exiguobacterium sp. A... 46.2 0.006
UniRef100_Q8DK67 Reverse transcriptase n=1 Tax=Thermosynechococ... 46.2 0.006
UniRef100_B3X2L2 Hnh n=2 Tax=Enterobacteriaceae RepID=B3X2L2_SHIDY 46.2 0.006
UniRef100_C4XD96 Endonuclease n=1 Tax=Klebsiella pneumoniae sub... 46.2 0.006
UniRef100_A3YQ82 MnlI restriction endonuclease n=1 Tax=Campylob... 46.2 0.006
UniRef100_D6TC63 RNA-directed DNA polymerase (Reverse transcrip... 46.2 0.006
UniRef100_Q8DL77 Reverse transcriptase n=1 Tax=Thermosynechococ... 46.2 0.006
UniRef100_D6TJ96 RNA-directed DNA polymerase (Reverse transcrip... 46.2 0.006
UniRef100_D6TC34 RNA-directed DNA polymerase (Reverse transcrip... 46.2 0.006
UniRef100_D6TRK9 RNA-directed DNA polymerase (Reverse transcrip... 45.8 0.007
UniRef100_D6TIY0 RNA-directed DNA polymerase (Reverse transcrip... 45.8 0.007
UniRef100_D6TFF7 RNA-directed DNA polymerase (Reverse transcrip... 45.8 0.007
UniRef100_D5CK95 HNH endonuclease n=1 Tax=Enterobacter cloacae ... 45.8 0.007
UniRef100_F4Y301 Restriction endonuclease n=1 Tax=Lyngbya majus... 45.8 0.007
UniRef100_C1MEX8 HNH endonuclease n=1 Tax=Citrobacter sp. 30_2 ... 45.8 0.007
UniRef100_Q8TKB6 Hnh endonuclease n=1 Tax=Methanosarcina acetiv... 45.8 0.007
UniRef100_F7KW75 Putative uncharacterized protein n=1 Tax=Lachn... 45.8 0.007
UniRef100_C4U1S6 HNH nuclease n=1 Tax=Yersinia kristensenii ATC... 45.8 0.007
UniRef100_Q8DMT0 Reverse transcriptase n=1 Tax=Thermosynechococ... 45.8 0.008
UniRef100_Q8DJR1 Reverse transcriptase n=1 Tax=Thermosynechococ... 45.8 0.008
UniRef100_Q4C0L4 RNA-directed DNA polymerase (Reverse transcrip... 45.8 0.008
UniRef100_Q8CM00 Reverse transcriptase n=1 Tax=Thermosynechococ... 45.8 0.008
UniRef100_D7D1K3 HNH endonuclease n=1 Tax=Geobacillus sp. C56-T... 45.8 0.008
UniRef100_Q4CAS8 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 45.8 0.008
UniRef100_A4T2Q8 HNH endonuclease n=2 Tax=Mycobacterium RepID=A... 45.8 0.008
UniRef100_E0UGW6 RNA-directed DNA polymerase n=1 Tax=Cyanothece... 45.8 0.008
UniRef100_Q4BXA1 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 45.8 0.008
UniRef100_C3RB64 Putative uncharacterized protein n=1 Tax=Bacte... 45.8 0.008
UniRef100_F9VXV8 Putative uncharacterized protein n=1 Tax=Gordo... 45.8 0.008
UniRef100_E1KQC7 HNH endonuclease domain protein n=1 Tax=Prevot... 45.4 0.009
UniRef100_A6FSV0 HNH nuclease n=1 Tax=Roseobacter sp. AzwK-3b R... 45.4 0.009
UniRef100_Q3ZAC8 HNH endonuclease domain protein n=1 Tax=Dehalo... 45.4 0.009
UniRef100_C4V1Z5 Putative uncharacterized protein n=1 Tax=Selen... 45.4 0.009
UniRef100_Q4C651 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 45.4 0.009
UniRef100_D0IIJ2 HNH endonuclease n=2 Tax=Vibrio RepID=D0IIJ2_9... 45.4 0.010
UniRef100_D9W784 HNH endonuclease n=1 Tax=Streptomyces himastat... 45.4 0.010
UniRef100_Q8GMB4 Group II intron-associated open reading frame ... 45.4 0.011
UniRef100_C1DQC3 RNA-directed DNA polymerase n=1 Tax=Azotobacte... 45.4 0.011
UniRef100_Q4BZ69 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 45.1 0.011
UniRef100_A0LM25 HNH endonuclease n=1 Tax=Syntrophobacter fumar... 45.1 0.011
UniRef100_C6WXV3 HNH endonuclease n=1 Tax=Methylotenera mobilis... 45.1 0.012
UniRef100_D2QLF4 HNH endonuclease n=1 Tax=Spirosoma linguale DS... 45.1 0.012
UniRef100_C9Y5Y2 Putative uncharacterized protein n=1 Tax=Crono... 45.1 0.012
UniRef100_F5YX87 HNH endonuclease n=1 Tax=Mycobacterium sp. JDM... 45.1 0.012
UniRef100_Q4C739 RNA-directed DNA polymerase (Reverse transcrip... 45.1 0.012
UniRef100_D8G147 RNA-directed DNA polymerase n=1 Tax=Oscillator... 45.1 0.012
UniRef100_Q6EME6 Hnh endonuclease n=1 Tax=Escherichia coli RepI... 45.1 0.013
UniRef100_A5V9C7 HNH endonuclease n=1 Tax=Sphingomonas wittichi... 45.1 0.013
UniRef100_D2S2Y4 HNH endonuclease n=1 Tax=Haloterrigena turkmen... 45.1 0.013
UniRef100_C3BJL8 Paclitaxel/taxanoid biosynthesis susceptibilit... 45.1 0.014
UniRef100_Q0HZ96 RNA-directed DNA polymerase n=1 Tax=Shewanella... 45.1 0.014
UniRef100_B8I839 HNH endonuclease n=1 Tax=Clostridium celluloly... 45.1 0.014
UniRef100_C4UQ38 Putative uncharacterized protein n=1 Tax=Yersi... 44.7 0.015
UniRef100_B0K6Q9 HNH endonuclease n=3 Tax=Thermoanaerobacter Re... 44.7 0.015
UniRef100_D8MQN6 Predicted endonuclease n=1 Tax=Erwinia billing... 44.7 0.015
UniRef100_D2RK49 HNH endonuclease n=1 Tax=Acidaminococcus ferme... 44.7 0.016
UniRef100_Q4C4V3 RNA-directed DNA polymerase n=1 Tax=Crocosphae... 44.7 0.016
UniRef100_Q4C5H9 RNA-directed DNA polymerase n=1 Tax=Crocosphae... 44.7 0.016
UniRef100_B0JVV8 RNA-directed DNA polymerase n=1 Tax=Microcysti... 44.7 0.017
UniRef100_D6TIG6 HNH endonuclease n=1 Tax=Ktedonobacter racemif... 44.7 0.018
UniRef100_D2AT16 Putative uncharacterized protein n=1 Tax=Strep... 44.7 0.018
UniRef100_B7JSJ9 DNA helicase, putative n=1 Tax=Bacillus cereus... 44.7 0.018
UniRef100_C3G8U4 HNH endonuclease n=1 Tax=Bacillus thuringiensi... 44.7 0.018
UniRef100_D0XIE3 Putative uncharacterized protein n=1 Tax=Vibri... 44.7 0.019
UniRef100_D2YH85 Putative uncharacterized protein n=1 Tax=Vibri... 44.7 0.019
UniRef100_F7PFN0 Putative uncharacterized protein n=1 Tax=Halor... 44.3 0.020
UniRef100_Q0VRW5 Reverse transcriptase/maturase homolog n=1 Tax... 44.3 0.020
UniRef100_E5XGH2 HNH endonuclease domain-containing protein n=2... 44.3 0.020
UniRef100_Q4C1P0 RNA-directed DNA polymerase (Reverse transcrip... 44.3 0.020
UniRef100_A3DFY5 HNH endonuclease n=1 Tax=Clostridium thermocel... 44.3 0.020
UniRef100_Q4C2M6 RNA-directed DNA polymerase (Reverse transcrip... 44.3 0.020
UniRef100_F9P945 HNH endonuclease domain protein n=1 Tax=Strept... 44.3 0.020
UniRef100_B3Z1Y7 Gp45 n=1 Tax=Bacillus cereus W RepID=B3Z1Y7_BACCE 44.3 0.020
UniRef100_C4SNR8 HNH nuclease n=1 Tax=Yersinia frederiksenii AT... 44.3 0.021
UniRef100_Q4BYS8 RNA-directed DNA polymerase (Reverse transcrip... 44.3 0.022
UniRef100_Q4C7J9 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 44.3 0.023
UniRef100_F4Y3Z1 RNA-directed DNA polymerase n=1 Tax=Lyngbya ma... 44.3 0.023
UniRef100_C2LK08 Putative uncharacterized protein n=1 Tax=Prote... 44.3 0.023
UniRef100_Q5YZE7 Putative uncharacterized protein n=1 Tax=Nocar... 43.9 0.025
UniRef100_B8G6B2 HNH endonuclease n=1 Tax=Chloroflexus aggregan... 43.9 0.025
UniRef100_D6TRJ9 HNH endonuclease n=1 Tax=Ktedonobacter racemif... 43.9 0.025
UniRef100_A4G659 Putative restriction endonuclease n=1 Tax=Herm... 43.9 0.026
UniRef100_F5VD18 Paclitaxel/taxanoid biosynthesis susceptibilit... 43.9 0.026
UniRef100_Q8SDH4 Putative uncharacterized protein n=1 Tax=Lacto... 43.9 0.026
UniRef100_C3AIY7 Hnh endonuclease n=1 Tax=Bacillus mycoides Rep... 43.9 0.027
UniRef100_F5VFX5 Paclitaxel/taxanoid biosynthesis susceptibilit... 43.9 0.027
UniRef100_A8ZKQ7 RNA-directed DNA polymerase n=1 Tax=Acaryochlo... 43.9 0.028
UniRef100_Q4BYQ4 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 43.9 0.028
UniRef100_Q4C286 RNA-directed DNA polymerase (Reverse transcrip... 43.9 0.028
UniRef100_G1UPM8 Putative uncharacterized protein n=1 Tax=Desul... 43.9 0.028
UniRef100_F3Q756 HNH endonuclease domain protein n=1 Tax=Klebsi... 43.9 0.029
UniRef100_A1F1U9 HNH endonuclease domain protein n=1 Tax=Vibrio... 43.9 0.029
UniRef100_C4X2M1 Putative uncharacterized protein n=1 Tax=Klebs... 43.9 0.030
UniRef100_B8ZRA7 Putative uncharacterized protein n=2 Tax=Mycob... 43.9 0.030
UniRef100_A5N0L8 Phage-related protein n=2 Tax=Clostridium kluy... 43.9 0.030
UniRef100_D6TZ06 HNH endonuclease n=1 Tax=Ktedonobacter racemif... 43.9 0.030
UniRef100_B4SDY4 HNH nuclease n=1 Tax=Pelodictyon phaeoclathrat... 43.9 0.031
UniRef100_A6THN6 Putative uncharacterized protein n=1 Tax=Klebs... 43.9 0.031
UniRef100_F6CQN7 HNH endonuclease n=1 Tax=Desulfotomaculum kuzn... 43.9 0.031
UniRef100_B9JB56 Putative uncharacterized protein n=1 Tax=Agrob... 43.9 0.032
UniRef100_Q1YWU8 Putative uncharacterized protein n=1 Tax=Photo... 43.9 0.032
UniRef100_F4Y310 Group II catalytic intron n=1 Tax=Lyngbya maju... 43.9 0.032
UniRef100_A1REN7 HNH nuclease n=1 Tax=Shewanella sp. W3-18-1 Re... 43.5 0.033
UniRef100_Q3A0C0 HNH endonuclease family protein n=1 Tax=Peloba... 43.5 0.033
UniRef100_E7K1Z0 HNH endonuclease family protein n=1 Tax=Shigel... 43.5 0.034
UniRef100_D6U0E7 HNH endonuclease n=1 Tax=Ktedonobacter racemif... 43.5 0.034
UniRef100_B4D4V1 HNH endonuclease n=1 Tax=Chthoniobacter flavus... 43.5 0.034
UniRef100_D6U4W5 HNH endonuclease n=1 Tax=Ktedonobacter racemif... 43.5 0.035
UniRef100_G4GH93 HNH endonuclease n=1 Tax=Natrinema pellirubrum... 43.5 0.035
UniRef100_B1MMU0 Probable HNH endonuclease n=1 Tax=Mycobacteriu... 43.5 0.035
UniRef100_A6FSB3 HNH nuclease n=1 Tax=Roseobacter sp. AzwK-3b R... 43.5 0.035
UniRef100_C8TC51 Putative uncharacterized protein n=1 Tax=Klebs... 43.5 0.036
UniRef100_B1YFT2 HNH endonuclease n=1 Tax=Exiguobacterium sibir... 43.5 0.036
UniRef100_F4L7M9 RNA-directed DNA polymerase (Reverse transcrip... 43.5 0.037
UniRef100_Q4C2F9 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 43.5 0.037
UniRef100_B0VJM1 Putative ATP dependant helicase yprA n=1 Tax=C... 43.5 0.037
UniRef100_Q3Z7J0 HNH endonuclease domain protein n=1 Tax=Dehalo... 43.5 0.038
UniRef100_B0MB23 Putative uncharacterized protein n=1 Tax=Anaer... 43.5 0.038
UniRef100_Q9R669 Group II SELF-splicing intron ORF (Fragments) ... 43.5 0.039
UniRef100_F8J1B0 Putative HNH endonuclease n=1 Tax=Lactobacillu... 43.5 0.039
UniRef100_A9IAX2 Reverse transcriptase n=1 Tax=Bordetella petri... 43.5 0.040
UniRef100_Q8YJX0 Alr8560 protein n=1 Tax=Nostoc sp. PCC 7120 Re... 43.5 0.041
UniRef100_B2JR48 Putative uncharacterized protein n=1 Tax=Burkh... 43.5 0.041
UniRef100_A1KLG5 Putative uncharacterized protein BCG_2489c n=6... 43.1 0.042
UniRef100_D5Y559 HNH endonuclease n=34 Tax=Mycobacterium tuberc... 43.1 0.043
UniRef100_E6RQ53 Putative uncharacterized protein n=1 Tax=Pseud... 43.1 0.044
UniRef100_UPI000225B7DE UPI000225B7DE related cluster n=1 Tax=u... 43.1 0.048
UniRef100_D9QQ21 HNH endonuclease n=1 Tax=Acetohalobium arabati... 43.1 0.048
UniRef100_C4XM37 Putative uncharacterized protein n=1 Tax=Desul... 43.1 0.048
UniRef100_B0MFF1 Putative uncharacterized protein n=1 Tax=Anaer... 43.1 0.048
UniRef100_B2IX42 HNH endonuclease n=1 Tax=Nostoc punctiforme PC... 43.1 0.049
UniRef100_A4BER6 Putative uncharacterized protein n=1 Tax=Reine... 43.1 0.050
UniRef100_B8I0D2 HNH endonuclease n=1 Tax=Clostridium celluloly... 43.1 0.052
UniRef100_Q2FQI6 HNH endonuclease n=1 Tax=Methanospirillum hung... 43.1 0.052
UniRef100_C4K4G6 Group II intron encoded reverse transcriptase ... 43.1 0.053
UniRef100_D7CEJ3 HNH endonuclease n=1 Tax=Streptomyces bingchen... 43.1 0.053
UniRef100_A7I926 HNH endonuclease n=1 Tax=Methanoregula boonei ... 43.1 0.053
UniRef100_C3M8C3 Group II intron encoded reverse transcriptase ... 43.1 0.054
UniRef100_C4K5R2 Group II intron encoded reverse transcriptase ... 43.1 0.055
UniRef100_C4K431 Group II intron encoded reverse transcriptase ... 42.7 0.055
UniRef100_G4GBX0 HNH endonuclease n=1 Tax=Natronobacterium greg... 42.7 0.055
UniRef100_C4K551 Group II intron encoded reverse transcriptase ... 42.7 0.056
UniRef100_C4F8E8 Putative uncharacterized protein n=1 Tax=Colli... 42.7 0.057
UniRef100_E5X4Y0 HNH endonuclease n=1 Tax=Eggerthella sp. 1_3_5... 42.7 0.058
UniRef100_A5P8I1 Putative uncharacterized protein n=1 Tax=Eryth... 42.7 0.058
UniRef100_B5Y2L5 HNH endonuclease domain protein n=1 Tax=Klebsi... 42.7 0.060
UniRef100_D6U8M0 HNH endonuclease n=1 Tax=Ktedonobacter racemif... 42.7 0.060
UniRef100_Q82CY5 Putative uncharacterized protein n=1 Tax=Strep... 42.7 0.061
UniRef100_F0HLS5 HNH endonuclease domain protein n=1 Tax=Eggert... 42.7 0.061
UniRef100_A9B2D5 HNH endonuclease n=1 Tax=Herpetosiphon auranti... 42.7 0.066
UniRef100_B9MNG3 HNH endonuclease n=1 Tax=Caldicellulosiruptor ... 42.7 0.067
UniRef100_E4SYR6 Paclitaxel/taxanoid biosynthesis susceptibilit... 42.7 0.068
UniRef100_B7GM48 Restriction endonuclease, McrA/HNH family, pha... 42.7 0.069
UniRef100_E9RVF4 Putative uncharacterized protein n=1 Tax=Lachn... 42.7 0.070
UniRef100_B5CRX9 Putative uncharacterized protein n=1 Tax=Rumin... 42.7 0.070
UniRef100_F5LC98 HNH endonuclease domain protein n=1 Tax=Paenib... 42.4 0.072
UniRef100_F2AIG2 HNH endonuclease n=1 Tax=Rhizobium etli CNPAF5... 42.4 0.072
UniRef100_D5PH47 HNH endonuclease n=1 Tax=Mycobacterium parascr... 42.4 0.073
UniRef100_E6U9R5 HNH endonuclease n=1 Tax=Ethanoligenens harbin... 42.4 0.074
UniRef100_C4K5N9 Group II intron encoded reverse transcriptase ... 42.4 0.075
UniRef100_B4SCA5 HNH nuclease n=1 Tax=Pelodictyon phaeoclathrat... 42.4 0.075
UniRef100_C3H0B3 Putative uncharacterized protein n=1 Tax=Bacil... 42.4 0.075
UniRef100_E0RZ58 HNH endonuclease domain-containing protein n=1... 42.4 0.077
UniRef100_UPI0001FFE105 HNH endonuclease n=1 Tax=Pseudonocardia... 42.4 0.079
UniRef100_UPI0001AF68B0 hypothetical protein MkanA1_16649 n=1 T... 42.4 0.079
UniRef100_D8FLX6 HNH endonuclease domain protein n=1 Tax=Lactob... 42.4 0.079
UniRef100_Q4C2H4 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 42.4 0.083
UniRef100_E5CFK9 HNH endonuclease n=1 Tax=Bacteroides sp. D2 Re... 42.4 0.083
UniRef100_Q4C417 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 42.4 0.083
UniRef100_Q4BUJ8 HNH endonuclease n=1 Tax=Crocosphaera watsonii... 42.4 0.084
UniRef100_Q21AN9 HNH endonuclease n=1 Tax=Rhodopseudomonas palu... 42.4 0.085
UniRef100_D1A409 HNH endonuclease n=1 Tax=Thermomonospora curva... 42.4 0.087
UniRef100_F5L4X5 HNH endonuclease n=1 Tax=Caldalkalibacillus th... 42.4 0.088
UniRef100_D6HN55 HNH endonuclease domain protein n=1 Tax=Erysip... 42.4 0.089
UniRef100_B0N9V8 Putative uncharacterized protein n=1 Tax=Clost... 42.4 0.093
UniRef100_Q67M53 Conserved domain protein n=1 Tax=Symbiobacteri... 42.0 0.096
UniRef100_E8LX13 Putative uncharacterized protein n=1 Tax=Vibri... 42.0 0.096
UniRef100_D1NK18 HNH endonuclease n=1 Tax=Clostridium thermocel... 42.0 0.099
> UniRef100_P24200 5-methylcytosine-specific restriction enzyme
A n=40 Tax=Enterobacteriaceae RepID=MCRA_ECOLI
Length=277
Score = 574 bits (1479), Expect = 7e-162, Method: Compositional matrix adjust.
Identities = 277/277 (100%), Positives = 277/277 (100%), Gaps = 0/277 (0%)
Query 1 MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVV 60
MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVV
Sbjct 1 MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVV 60
Query 61 VYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNR 120
VYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNR
Sbjct 61 VYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNR 120
Query 121 TKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPV 180
TKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPV
Sbjct 121 TKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPV 180
Query 181 EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT 240
EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT
Sbjct 181 EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT 240
Query 241 TDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
TDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK
Sbjct 241 TDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
> UniRef100_E8DA18 E14 prophage; 5-methylcytosine-specific restriction
endonuclease B n=1 Tax=Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047 RepID=E8DA18_SALMO
Length=270
Score = 543 bits (1399), Expect = 1e-152, Method: Compositional matrix adjust.
Identities = 261/262 (99%), Positives = 261/262 (99%), Gaps = 0/262 (0%)
Query 1 MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVV 60
MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVV
Sbjct 1 MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVV 60
Query 61 VYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNR 120
VYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNR
Sbjct 61 VYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNR 120
Query 121 TKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPV 180
TKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPV
Sbjct 121 TKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPV 180
Query 181 EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT 240
EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT
Sbjct 181 EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT 240
Query 241 TDNCVALCPNCHRELHYSKNAK 262
TDNCVALCPNCHRELHYSKN K
Sbjct 241 TDNCVALCPNCHRELHYSKNDK 262
> UniRef100_A9BU78 HNH endonuclease n=1 Tax=Delftia acidovorans
SPH-1 RepID=A9BU78_DELAS
Length=330
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 75/111 (67%), Gaps = 0/111 (0%)
Query 165 LIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPY 224
L K ++P G+ P + R + RDP VKAW+L+++ G+CE C NAPF DG P+
Sbjct 217 LENKKQAKPAGNSNPGTIIRQVAQFERDPAVKAWVLKKAAGVCECCSSNAPFESTDGQPF 276
Query 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRL 275
LEVHH+ L+ GG+DT N VALCPNCHR LHY AKELIE +++ +NRL
Sbjct 277 LEVHHIRKLAEGGSDTVSNTVALCPNCHRALHYGMRAKELIESIFIKVNRL 327
> UniRef100_C3K0B7 Putative 5-methylcytosine-specific restriction
enzyme n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K0B7_PSEFS
Length=237
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 84/133 (63%), Gaps = 2/133 (1%)
Query 146 SELSQPTDDESLLNMRVSKLIKKTLSQ-PEGSRKPVEVERLQKVYVRDPMVKAWILQQSK 204
S+ + T DE L R SKL ++ +Q P+G +P +V + +VRDP V+AW+L+++K
Sbjct 105 SDDAAQTADEQTLIRRASKLQQQPFTQLPDGIAQPQKVSTVSTAFVRDPKVRAWVLKEAK 164
Query 205 GICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKEL 264
GICE CG NAPF + DG P+LEVHHV L+ G+D N VALCPNCH+ H S +
Sbjct 165 GICEGCGSNAPFEV-DGLPFLEVHHVKHLAQKGSDRISNAVALCPNCHQRCHRSSDRDAF 223
Query 265 IEMLYVNINRLQK 277
E LY + RL +
Sbjct 224 TEGLYAKVGRLAR 236
> UniRef100_E2XX24 HNH endonuclease n=1 Tax=Pseudomonas fluorescens
WH6 RepID=E2XX24_PSEFL
Length=237
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 2/131 (1%)
Query 146 SELSQPTDDESLLNMRVSKLIKKTLSQ-PEGSRKPVEVERLQKVYVRDPMVKAWILQQSK 204
SE + T DE L R SKL ++ + P+G +P +V + +VRDP V+AW+L+++K
Sbjct 105 SEDAAQTADEQTLIRRASKLQQQPFPKLPDGIAQPQKVSTVSTSFVRDPKVRAWVLKEAK 164
Query 205 GICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKEL 264
GICE CG NAPF + DG P+LEVHHV L+ G+D N VALCPNCH+ H S + +
Sbjct 165 GICEGCGSNAPFEV-DGLPFLEVHHVKHLAQKGSDRITNAVALCPNCHQRCHQSSDREAF 223
Query 265 IEMLYVNINRL 275
E LY I RL
Sbjct 224 TEGLYAKIGRL 234
> UniRef100_F9TLW9 5-methylcytosine-specific restriction protein
A n=1 Tax=Vibrio nigripulchritudo ATCC 27043 RepID=F9TLW9_9VIBR
Length=225
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 85/131 (64%), Gaps = 2/131 (1%)
Query 141 IRGELSEL-SQPTDDESLLNMRVSKLIK-KTLSQPEGSRKPVEVERLQKVYVRDPMVKAW 198
I G ++EL ++P++ E + VS K K +PEG +P +VY R VKAW
Sbjct 86 IEGIIAELENRPSNPEVGFEIEVSSYQKRKATDKPEGINEPKVNYSSTRVYERSAKVKAW 145
Query 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
+L ++ G+CE C + APF G PYLEVHHV LSSGG+D+ NCVALCPNCHR LHYS
Sbjct 146 VLNRANGVCELCLEQAPFTALSGKPYLEVHHVRRLSSGGSDSVSNCVALCPNCHRSLHYS 205
Query 259 KNAKELIEMLY 269
NA++LI+ LY
Sbjct 206 INAQQLIDKLY 216
> UniRef100_Q6ALL3 Probable 5-methylcytosine-specific restriction
enzyme A n=1 Tax=Desulfotalea psychrophila RepID=Q6ALL3_DESPS
Length=237
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query 64 ASSSVRKHMHSLDERK---IHPGEYFTL---IGNSPRDIRLKMCGYQAYFSRTGRKEIPS 117
AS MHSL+ R + Y TL G + + +M +S GR+ +
Sbjct 22 ASVDAYVEMHSLEARGKPFVKKAYYETLANTFGRTVKSYEYRMQNISYVYSLQGRQWVSG 81
Query 118 GNRTKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLS-QPEGS 176
+ + +NV + D I + E L + N V KL K+ S P+G+
Sbjct 82 LKPARNVGVNVIQMLEDL----IAKSEGQHLVAI----AYFNAAVEKLRKRPPSLPPKGN 133
Query 177 RKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSG 236
+KP +VRDP V AW+L ++ G CE C +APF DG+P+LEVHHV L+
Sbjct 134 KKPASFLSSGTRFVRDPEVVAWVLAEAAGHCECCESSAPFLREDGSPFLEVHHVQHLADH 193
Query 237 GADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQ 276
G DT +N VALCPNCH ELHY KEL E L I RLQ
Sbjct 194 GEDTINNAVALCPNCHSELHYGMGKKELAEELRAKITRLQ 233
> UniRef100_Q2Y8M1 HNH nuclease n=1 Tax=Nitrosospira multiformis
ATCC 25196 RepID=Q2Y8M1_NITMU
Length=226
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 77/115 (66%), Gaps = 8/115 (6%)
Query 167 KKTLSQPEGSRKP----VEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN 222
+K L +P G+ +P + V +L+ RDP VKAW+LQQ+ G CE+C K APF DG+
Sbjct 115 QKDLPKPSGNPRPKRRRISVAQLE----RDPNVKAWVLQQAAGTCESCEKPAPFQGADGS 170
Query 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
PYLE+H+V L+ GGAD N VALCPNCHRE+HY NA+ + LY + RL++
Sbjct 171 PYLELHYVQGLADGGADAVSNAVALCPNCHREIHYGANAQAVEAWLYDTVQRLER 225
> UniRef100_A0KIQ7 Probable 5-methylcytosine-specific restriction
enzyme A n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC
7966 RepID=A0KIQ7_AERHH
Length=246
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
Query 138 ASIIRGELSEL-SQPTDDESLLNMRVSKL-IKKTLSQPEGSRKPVEVERLQKVYVRDPMV 195
A II L EL QP ++ +VS+ IK TL P G ++P + Y RDP V
Sbjct 104 APIIERLLCELDGQPYTGKAAFEHQVSRYKIKPTLPMPIGIQEPQQRYGANTSYGRDPKV 163
Query 196 KAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHREL 255
KAW+L + G CE+C + APF+ G+ +LEVHH+ L+ GG+DT N VALCPNCHREL
Sbjct 164 KAWVLMTAVGRCESCAQPAPFHATTGDAFLEVHHLRTLAEGGSDTISNTVALCPNCHREL 223
Query 256 HYSKNAKELIEMLYVNINRL 275
HY N + E LY + RL
Sbjct 224 HYGVNQAQKREALYQALPRL 243
> UniRef100_A9AKD6 5-methylcytosine-specific restriction enzyme
A n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AKD6_BURM1
Length=242
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 74/115 (64%), Gaps = 2/115 (1%)
Query 164 KLIKKTLSQPEGSRKPVEVERLQKVYVR-DPMVKAWILQQSKGICENCGKNAPFYLNDGN 222
+L + ++ P G+ +P EV VR DP VKAW+L Q++G CE CG APF DG
Sbjct 128 RLKRVPVAPPTGNARP-EVGYATVAQVRRDPAVKAWVLAQARGTCECCGNPAPFADADGL 186
Query 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
PYLEVHHV L+ G D N VA+CPNCHRELHY + A+EL+E LY + RL +
Sbjct 187 PYLEVHHVRRLAERGPDVISNAVAICPNCHRELHYGEKARELVERLYTRVPRLVR 241
> UniRef100_B9B0B8 HNH nuclease n=1 Tax=Burkholderia multivorans
CGD1 RepID=B9B0B8_9BURK
Length=205
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 74/115 (64%), Gaps = 2/115 (1%)
Query 164 KLIKKTLSQPEGSRKPVEVERLQKVYVR-DPMVKAWILQQSKGICENCGKNAPFYLNDGN 222
+L + ++ P G+ +P EV VR DP VKAW+L Q++G CE CG APF DG
Sbjct 91 RLKRVPVAPPTGNARP-EVGYATVAQVRRDPAVKAWVLAQARGTCECCGNPAPFADADGL 149
Query 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
PYLEVHHV L+ G D N VA+CPNCHRELHY + A+EL+E LY + RL +
Sbjct 150 PYLEVHHVRRLAERGPDVISNAVAICPNCHRELHYGEKARELVERLYTRVPRLVR 204
> UniRef100_B4EJL0 Putative restriction endonuclease n=1 Tax=Burkholderia
cenocepacia J2315 RepID=B4EJL0_BURCJ
Length=242
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 68/111 (61%), Gaps = 0/111 (0%)
Query 165 LIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPY 224
L K ++ P G+ P RDP VKAW+L Q+ G CE C + APF DG PY
Sbjct 129 LKKPQIAPPPGNASPEATRATVTQIRRDPSVKAWVLAQANGTCECCSRPAPFKGADGLPY 188
Query 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRL 275
LEVHHV L+ G D N VA+CPNCHRELHY ++A++L+E LY + RL
Sbjct 189 LEVHHVRKLAERGPDLVSNTVAVCPNCHRELHYGESARQLVERLYARLPRL 239
> UniRef100_A6QD09 5-methylcytosine-specific restriction enzyme
A n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QD09_SULNB
Length=225
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Query 148 LSQPTDDESLLNMRVSKLIKKTLS-QPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGI 206
LS+P V KL+ K L +P+ +P + Y RDP + AW+L +KGI
Sbjct 98 LSEPVS----FQAEVDKLVHKKLQDKPKAVLEPKRYDIAITKYDRDPQIVAWVLMNAKGI 153
Query 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIE 266
CE C K APF +DG P+LEVHH+ L+ G+D+ N +A+CPNCHRELHY +N L+
Sbjct 154 CECCNKEAPFVKDDGVPFLEVHHLRRLADDGSDSITNAIAICPNCHRELHYGQNKDILLT 213
Query 267 MLYVNINRL 275
+Y ++RL
Sbjct 214 TIYSQVSRL 222
> UniRef100_Q1YK78 Putative 5-methylcytosine-specific restriction
enzyme n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YK78_MOBAS
Length=125
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query 158 LNMRVSKL-IKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPF 216
L RVS+L + T++ P+G +P R V++RDP VKA++L+++ GICE C APF
Sbjct 3 LERRVSRLSARATIAFPKGIVQPKHTTRTTIVFLRDPGVKAYVLRRAGGICEACDFPAPF 62
Query 217 YLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNIN 273
G +LEVHH+ PL+ GG+D N VALCPNCHR +H++ +A + E LY I
Sbjct 63 KTALGGDFLEVHHLKPLAEGGSDRAQNAVALCPNCHRAMHHASDAGQRTERLYAKIG 119
> UniRef100_F0G3M3 5-methylcytosine-specific restriction enzyme
A n=1 Tax=Burkholderia sp. TJI49 RepID=F0G3M3_9BURK
Length=237
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 72/115 (62%), Gaps = 0/115 (0%)
Query 161 RVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLND 220
+V++L K +P GS+ P + VRDP VKAW+L+++ G CE C + APF D
Sbjct 120 KVARLRKTLKQRPAGSKTPQKTTSTTTSIVRDPHVKAWVLERANGTCEACDQPAPFIGAD 179
Query 221 GNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRL 275
G P+LEVHH+ L+ G+DT N VA+CPNCHR LH+S+ A+ E LY + L
Sbjct 180 GFPFLEVHHLRRLADDGSDTPTNAVAVCPNCHRRLHFSEIARAYRETLYEKVAEL 234
> UniRef100_UPI00016A2859 HNH endonuclease n=1 Tax=Burkholderia
thailandensis TXDOH RepID=UPI00016A2859
Length=214
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 73/111 (65%), Gaps = 2/111 (1%)
Query 166 IKKTLSQ-PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPY 224
I+KTL + P+G++ P +VRD VKAW+L+++K CE C + APF +G P+
Sbjct 102 IRKTLDERPDGNKAPGTATSTTTSFVRDLKVKAWVLKRAKDNCEACDQPAPFSGANG-PF 160
Query 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRL 275
LEVHH+ L+ GG+DT N VA+CPNCHR LH+SK+A+ E +Y + L
Sbjct 161 LEVHHLRKLADGGSDTVTNAVAVCPNCHRRLHFSKDARAYRETIYEKVTEL 211
> UniRef100_G4QL11 Putative uncharacterized protein n=1 Tax=Glaciecola
nitratireducens FR1064 RepID=G4QL11_9ALTE
Length=280
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 69/103 (66%), Gaps = 0/103 (0%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
P+G R P + Q+ ++RD V A++L + G CE CG+ +PF +G YLEVHHV
Sbjct 175 PDGQRVPNKCTTSQEAFIRDAAVVAYVLGVANGSCECCGEKSPFIKFNGESYLEVHHVRH 234
Query 233 LSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRL 275
L+ GG+DT N +A+CPNCHRELH+ ++ L+E LY+ ++RL
Sbjct 235 LAKGGSDTISNAIAICPNCHRELHFGIDSNLLVEKLYLKVDRL 277
> UniRef100_Q3K870 Putative 5-methylcytosine-specific restriction
enzyme n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3K870_PSEPF
Length=237
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 0/82 (0%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VK W+L++S+GICE CG+ APF DG P+LEVHH+ L +GG D T N VALCPNCHR
Sbjct 154 VKKWVLKRSQGICEGCGQKAPFQDADGKPFLEVHHLKHLVNGGTDRTSNAVALCPNCHRR 213
Query 255 LHYSKNAKELIEMLYVNINRLQ 276
HYS + +E Y ++ L+
Sbjct 214 CHYSSDKEEFTAKFYRSVEGLE 235
> UniRef100_C2UHE5 HNH nuclease n=1 Tax=Bacillus cereus Rock1-15
RepID=C2UHE5_BACCE
Length=350
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 67/111 (60%), Gaps = 10/111 (9%)
Query 155 ESLLNMRVSK-------LIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGIC 207
ES L +RV K K L Q E + VEV Q Y R+P V A IL+++ G C
Sbjct 241 ESNLEIRVEKSRNIDSSKRKNRLEQAEKIPEVVEVVTTQ--YKRNPDVIAEILERANGYC 298
Query 208 ENCGKNAPF-YLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
E CG+ APF DG PYLEVHHV+PLS GG DT +N ALCPNCHR+ HY
Sbjct 299 EECGQEAPFKRTKDGTPYLEVHHVVPLSEGGEDTVENATALCPNCHRKAHY 349
> UniRef100_B1FDV2 HNH endonuclease n=1 Tax=Burkholderia ambifaria
IOP40-10 RepID=B1FDV2_9BURK
Length=244
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query 179 PVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN-PYLEVHHVIPLSSGG 237
P +V+ + +VYVR+P V A +L+++KG CE C K APF G+ PYLEVHH L+ GG
Sbjct 161 PKKVQVVTQVYVRNPDVVADVLERAKGACERCTKPAPFVRRRGDAPYLEVHHRKQLADGG 220
Query 238 ADTTDNCVALCPNCHRELHYSK 259
DT +N +ALCPNCHRE+HY K
Sbjct 221 EDTVENAIALCPNCHREMHYGK 242
> UniRef100_C3FAM5 HNH nuclease n=1 Tax=Bacillus thuringiensis
serovar monterrey BGSC 4AJ1 RepID=C3FAM5_BACTU
Length=350
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFY-LNDGNPYLEVHHVIP 232
+ +RKP VE + Y R+P V A +L+++ G CE C + APF DG PYLEVHHVIP
Sbjct 265 KAARKPDVVEVVTTQYKRNPDVIAEVLERANGYCEECKQEAPFKRAKDGTPYLEVHHVIP 324
Query 233 LSSGGADTTDNCVALCPNCHRELHY 257
L+ GG D+ +N V LCPNCHR+ HY
Sbjct 325 LAQGGEDSVENAVGLCPNCHRKAHY 349
> UniRef100_C3HSW4 HNH nuclease n=1 Tax=Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1 RepID=C3HSW4_BACTU
Length=350
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFY-LNDGNPYLEVHHVIP 232
+ +RKP VE + Y R+P V A +L+++ G CE C + APF DG PYLEVHHVIP
Sbjct 265 KAARKPDVVEVVTTQYKRNPDVIAEVLERANGYCEECKQEAPFKRAKDGTPYLEVHHVIP 324
Query 233 LSSGGADTTDNCVALCPNCHRELHY 257
L+ GG D+ +N V LCPNCHR+ HY
Sbjct 325 LAQGGEDSVENAVGLCPNCHRKAHY 349
> UniRef100_D0KA86 HNH endonuclease n=1 Tax=Pectobacterium wasabiae
WPP163 RepID=D0KA86_PECWW
Length=240
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 14/115 (12%)
Query 144 ELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQS 203
E+ + SQ T E ++ VS P E + K++VR+P V A +L ++
Sbjct 138 EVRKASQLTSKERKQHLAVSNF-------------PEMKEVITKIFVRNPYVVAEVLHRA 184
Query 204 KGICENCGKNAPFYL-NDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
+G CE C +NAPF DG PYLEVHH +PLS GG DT +N +A+CPNCHR+ H+
Sbjct 185 QGKCELCKRNAPFLRGKDGTPYLEVHHCVPLSQGGEDTVENAIAVCPNCHRQAHF 239
> UniRef100_D5RS39 5-methylcytosine-specific restriction enzyme
A n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RS39_9PROT
Length=279
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 13/130 (10%)
Query 145 LSELSQPTDDESLLNMRVSKLIKKTLSQPEGSR---------KPVEVERLQK-VYVRDPM 194
LS S+ DES N+ I+ ++S+ R +PV + +Q V+ RDP
Sbjct 145 LSIFSEYIFDES--NLDFQSKIQNSMSESSSIRLERIRSKEKQPVRRKIVQTTVFERDPD 202
Query 195 VKAWILQQSKGICENCGKNAPFY-LNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
+ A L Q++G C++C + APF DG PYLEVHH++PLS GG D+ DN ALCPNCHR
Sbjct 203 IVAEALFQARGHCQSCKQPAPFRRFADGRPYLEVHHIVPLSEGGPDSLDNVTALCPNCHR 262
Query 254 ELHYSKNAKE 263
++H+ A++
Sbjct 263 DMHFGPKARK 272
> UniRef100_G1W0M6 HNH endonuclease n=1 Tax=Dechlorosoma suillum
PS RepID=G1W0M6_9RHOO
Length=230
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 10/104 (9%)
Query 164 KLIKKTLSQPEGSRK---------PVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNA 214
K +KK L PE RK P +V R YVR+P V A +L +++G CE C + A
Sbjct 126 KAVKKALDSPESERKERLKNASPEPRKVWRKVSAYVRNPDVVAEVLHRARGSCEECREAA 185
Query 215 PFY-LNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
PF +++G PYLEVHH LS GG DT +N VALCPNCHR+ H+
Sbjct 186 PFVRISNGTPYLEVHHRKQLSDGGYDTVENAVALCPNCHRKKHF 229
> UniRef100_D2C2V7 HNH endonuclease n=1 Tax=Dickeya dadantii Ech586
RepID=D2C2V7_DICD5
Length=245
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 75/131 (57%), Gaps = 17/131 (12%)
Query 140 IIRGELSELSQPTDDESL---LNMRVSKLI---------KKTLSQPEGSRKPVEVERLQK 187
II SELS+ E+L N++V+K I + + S +K +++E
Sbjct 115 IIEFYESELSKTDSFENLTTEFNIQVNKSIADNQRSRQERLSTSPKYPQKKSLQIE---- 170
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLN-DGNPYLEVHHVIPLSSGGADTTDNCVA 246
++R+P V A +L ++ G CE C NAPF D PYLEVHH PLS GGADT DN +A
Sbjct 171 FFIRNPDVVAEVLLRANGKCERCCSNAPFLRKKDNTPYLEVHHKTPLSEGGADTVDNAIA 230
Query 247 LCPNCHRELHY 257
LCPNCHR LHY
Sbjct 231 LCPNCHRYLHY 241
> UniRef100_C2P748 HNH nuclease n=1 Tax=Bacillus cereus 172560W
RepID=C2P748_BACCE
Length=350
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPF-YLNDGNPYLEVHHVIP 232
+ RKP VE + Y R+P V A +L+++ G CE C + APF DG PYLEVHHV+P
Sbjct 265 QAVRKPEVVEVVTSQYKRNPDVIAEVLERANGYCEECKQEAPFKRAKDGTPYLEVHHVVP 324
Query 233 LSSGGADTTDNCVALCPNCHRELHY 257
L+ GG D+ +N V +CPNCHR+ H+
Sbjct 325 LAQGGEDSVENAVGMCPNCHRKAHF 349
> UniRef100_Q312Y0 HNH endonuclease n=1 Tax=Desulfovibrio alaskensis
G20 RepID=Q312Y0_DESDG
Length=203
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query 184 RLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN-PYLEVHHVIPLSSGGADTTD 242
R Q V+ R P+V A +L ++ G CE CG APF N PYLEVHHV PL+ GGADT
Sbjct 116 REQAVFRRSPVVAARVLLRAGGFCECCGAPAPFVSRADNLPYLEVHHVRPLAEGGADTPA 175
Query 243 NCVALCPNCHRELHY 257
NC+ALCPNCHR+ HY
Sbjct 176 NCMALCPNCHRQFHY 190
> UniRef100_D0Z3H8 HNH nuclease n=1 Tax=Photobacterium damselae
subsp. damselae CIP 102761 RepID=D0Z3H8_LISDA
Length=278
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPF-YLNDGNPYLEVHHVIP 232
+ ++KP + R+ K Y R+P + A L ++ GICE CG APF ++G PYLEVHH+IP
Sbjct 193 KANKKPQLISRVVKDYQRNPDIVAEALIRAAGICEACGCQAPFNKKSNGEPYLEVHHLIP 252
Query 233 LSSGGADTTDNCVALCPNCHRELHY 257
LS GG D+ DN +LCPNCHR+LH+
Sbjct 253 LSKGGEDSLDNVQSLCPNCHRKLHF 277
> UniRef100_D8D1K6 HNH endonuclease n=1 Tax=Comamonas testosteroni
S44 RepID=D8D1K6_COMTE
Length=248
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query 167 KKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPF-YLNDGNPYL 225
+K LS S++P V +L K++ R+P V A +L +KGIC +CG PF +DG+ YL
Sbjct 154 RKRLS--SASKRPKRVAKLVKLFQRNPDVVAEVLYLAKGICGSCGSRGPFNRRSDGSLYL 211
Query 226 EVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
EVHH IPL+ GG DT +N +ALCPNCHR H+
Sbjct 212 EVHHKIPLAEGGDDTVENAIALCPNCHRNKHF 243
> UniRef100_D7E6N9 HNH endonuclease n=1 Tax=Methanohalobium evestigatum
Z-7303 RepID=D7E6N9_METEZ
Length=475
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 0/98 (0%)
Query 159 NMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYL 218
++ + +L ++ + S KP E + RDP + + +KG+C+ CG NAPFY
Sbjct 357 DLSIEELKQRVRQSKKNSTKPDRREVNTETPKRDPYISELAKRMAKGVCQLCGNNAPFYD 416
Query 219 NDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
GNPYLE HH+I +S G DT DN VALC NCHR++H
Sbjct 417 RGGNPYLETHHIIRVSKDGDDTIDNVVALCANCHRKMH 454
> UniRef100_C0CKB6 Putative uncharacterized protein n=1 Tax=Blautia
hydrogenotrophica DSM 10507 RepID=C0CKB6_9FIRM
Length=270
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 79/127 (62%), Gaps = 6/127 (4%)
Query 145 LSELSQPTDDESLLNMRVSKLIKKT-LSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQS 203
+ EL +P +D +L + +L +++ +S+ E R+P VE VY RDP +K I + +
Sbjct 135 VRELDEP-EDRALSQLSSRELERRSKISRRE--RRPKTVE--TTVYYRDPYLKELIKRIA 189
Query 204 KGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKE 263
+G C+ CG +APF + PYLE HH+ L+ GG DT DN VA+CPNCHR +H ++
Sbjct 190 EGKCQFCGADAPFLDRNHEPYLEEHHIKRLADGGTDTIDNIVAICPNCHRRMHVLNREED 249
Query 264 LIEMLYV 270
++++ ++
Sbjct 250 ILKLRFI 256
> UniRef100_A2SMM5 Putative uncharacterized protein n=1 Tax=Methylibium
petroleiphilum PM1 RepID=A2SMM5_METPP
Length=220
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query 175 GSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPF-YLNDGNPYLEVHHVIPL 233
G KP V V++R+P V A +L ++ G CE C ++APF DG PYLEVHH PL
Sbjct 136 GQAKPERVIVQTTVFMRNPAVAAEVLLRANGHCELCRQSAPFKRRKDGTPYLEVHHRKPL 195
Query 234 SSGGADTTDNCVALCPNCHRELHYS 258
S GG DT N +ALCPNCHR HY+
Sbjct 196 SDGGNDTVQNAIALCPNCHRRAHYA 220
> UniRef100_B3HG69 HNH endonuclease n=1 Tax=Escherichia coli B7A
RepID=B3HG69_ECOLX
Length=241
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query 161 RVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLND 220
++S + +K + E S+ P +E +VY R P V A +L ++ G C+ C ++APF D
Sbjct 136 KLSSVERKQILATE-SKIPELIEVTTRVYKRSPYVVAEVLLRANGKCQYCKRDAPFLKED 194
Query 221 GNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
G P+LEVHH+ LS GG D+ +N +ALCPNCHR+ HY
Sbjct 195 GTPFLEVHHIEWLSKGGEDSVENAIALCPNCHRQAHY 231
> UniRef100_D8A4Z7 HNH endonuclease domain protein n=2 Tax=Escherichia
coli RepID=D8A4Z7_ECOLX
Length=241
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query 161 RVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLND 220
++S + +K + E S+ P +E +VY R P V A +L ++ G C+ C ++APF D
Sbjct 136 KLSSVERKQILATE-SKIPELIEVTTRVYKRSPYVVAEVLLRANGKCQYCKRDAPFLKED 194
Query 221 GNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
G P+LEVHH+ LS GG D+ +N +ALCPNCHR+ HY
Sbjct 195 GTPFLEVHHIEWLSKGGEDSVENAIALCPNCHRQAHY 231
> UniRef100_F0YZB4 5-methylcytosine-specific restriction enzyme
A (EcoKMcrA) n=1 Tax=Clostridium sp. D5 RepID=F0YZB4_9CLOT
Length=268
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 0/78 (0%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
VY R+P VK + ++G C+ C K APFY D PYLE HHV L+ GG+DT DN VAL
Sbjct 155 VYYRNPYVKEMVKHIAEGKCQMCSKEAPFYDKDSKPYLEEHHVNRLADGGSDTMDNVVAL 214
Query 248 CPNCHRELHYSKNAKELI 265
CPNCHR++H + ++ I
Sbjct 215 CPNCHRKIHVLNDEQDTI 232
> UniRef100_C9PPM2 5-methylcytosine-specific restriction enzyme
A n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PPM2_9PAST
Length=200
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 11/115 (9%)
Query 158 LNMRVSKLIKKTL-SQPEGSRKPVEVERLQKV---------YVRDPMVKAWILQQSKGIC 207
+ K +KK L PE +K ++ ++++K + RDP V A +L Q+ G+C
Sbjct 86 FDSEFDKKVKKALHDSPEKRQKRLDRKKIKKPSYSFVKIRQFHRDPDVVAEVLYQANGVC 145
Query 208 ENCGKNAPFYLN-DGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNA 261
C K APF D PYLEVHH IPLS G D+ NC+ALCPNCHR++H+ N+
Sbjct 146 GACKKPAPFNRKVDNMPYLEVHHKIPLSQNGDDSVSNCIALCPNCHRKIHFGNNS 200
> UniRef100_F7VFB1 Putative uncharacterized protein n=1 Tax=Acetobacter
tropicalis NBRC 101654 RepID=F7VFB1_9PROT
Length=272
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 0/133 (0%)
Query 145 LSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSK 204
LS ++ + + +++ + +L ++ L GS + L KV R V+ ++L ++
Sbjct 140 LSSEAEDLAEGAPIDLSLVELRERALQAAVGSNETSPRVALAKVRARSKAVRDYVLARAA 199
Query 205 GICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKEL 264
G+CE C APF + G PYLE HH+ LS GG D + ALCPNCHR+ H+ + L
Sbjct 200 GVCEACRSPAPFLTSSGQPYLEAHHIYKLSDGGPDHPASVAALCPNCHRQAHFGTDQLSL 259
Query 265 IEMLYVNINRLQK 277
L + R++K
Sbjct 260 NNALLERMRRIEK 272
> UniRef100_G2E8M8 HNH endonuclease n=1 Tax=Thiorhodococcus drewsii
AZ1 RepID=G2E8M8_9GAMM
Length=256
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 75/119 (63%), Gaps = 12/119 (10%)
Query 145 LSELSQPTDDESLLNMRVS-----KLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWI 199
L ++ + ++E L ++++S K + +PE +K VEV +Y R+P V A +
Sbjct 143 LEDVLKNFEEEVLRSLKLSESDRQKRLNSAERKPE--KKTVEV----TIYNRNPDVVAEV 196
Query 200 LQQSKGICENCGKNAPF-YLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
L+++KG+C CGK APF +G PYLEVHH + LS GG DT +N +ALCPNCHRE +Y
Sbjct 197 LEKAKGLCGICGKKAPFNKRTNGLPYLEVHHRVQLSKGGEDTIENTIALCPNCHREQYY 255
> UniRef100_E8VMV6 HNH endonuclease n=1 Tax=Vibrio vulnificus MO6-24/O
RepID=E8VMV6_VIBVM
Length=235
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 12/128 (9%)
Query 140 IIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRK---------PVEVERLQKVYV 190
I+ ++ PT ++ + + + I+++ + G+RK P ++ +
Sbjct 109 ILTSNDEQVGSPTSEQ--IQLELEDAIERSFNDTPGNRKKRLFSSNKRPERIQTTTHTFR 166
Query 191 RDPMVKAWILQQSKGICENCGKNAPFYLN-DGNPYLEVHHVIPLSSGGADTTDNCVALCP 249
R+P V +L ++ G+CE C + APF + DG PYLEVHH+ L+ GG D+ +N ALCP
Sbjct 167 RNPDVIVEVLLRADGVCERCKQQAPFSRSRDGTPYLEVHHIKRLADGGDDSVENAQALCP 226
Query 250 NCHRELHY 257
NCHRELH+
Sbjct 227 NCHRELHF 234
> UniRef100_A3UNY9 Putative restriction endonuclease n=1 Tax=Vibrio
splendidus 12B01 RepID=A3UNY9_VIBSP
Length=273
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 10/135 (7%)
Query 131 IYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTL-SQPEGSRKPVEVERLQKVY 189
I S +I + S L++PT +SL +R L L + P+ E+L V
Sbjct 132 IVPQSVSNTIQTPKASYLTKPTKSKSLKQLRDIALASTPLQADPK--------EQLTHVK 183
Query 190 VRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCP 249
R +K + +++ GICE CG +PF G PYLEVHH+ L+ GGAD +N +ALCP
Sbjct 184 YRSEAIKLYAKKRANGICEGCGVPSPFETKSG-PYLEVHHLTRLADGGADCPENVIALCP 242
Query 250 NCHRELHYSKNAKEL 264
CHRE HYS A +
Sbjct 243 TCHREAHYSVGAADF 257
> UniRef100_G4T266 HNH nuclease n=1 Tax=Methylomicrobium alcaliphilum
RepID=G4T266_METAA
Length=136
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query 177 RKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYL-NDGNPYLEVHHVIPLSS 235
+ P ++E + V+ R+P V A +L ++KG CE+CGK APF D PYLEVHH + LS+
Sbjct 54 KTPSKMETIVTVFKRNPDVVAEVLIRAKGKCESCGKPAPFKRRKDDKPYLEVHHKVFLSN 113
Query 236 GGADTTDNCVALCPNCHRELHY 257
GG DT +N ALCPNCH+E H+
Sbjct 114 GGDDTVENAEALCPNCHKEKHF 135
> UniRef100_A8ZWC1 HNH endonuclease n=1 Tax=Desulfococcus oleovorans
Hxd3 RepID=A8ZWC1_DESOH
Length=303
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDG-NPYLEVHHVI 231
P G +P ++ R+ Y RDP +++++++++KG CE CG+ F ++DG N YLE HH+I
Sbjct 201 PPGISEPEKISRMSPSYSRDPKIRSFVIKRAKGRCEYCGEQG-FLMSDGQNYYLEAHHII 259
Query 232 PLSSGGADTTDNCVALCPNCHRELHYSKNAKEL-IEM 267
L+ G DT +N +ALCP HRE H+ N ++L +EM
Sbjct 260 ALADEGEDTVENVIALCPKHHREAHFGANKEKLEVEM 296
> UniRef100_B0NHX5 Putative uncharacterized protein n=1 Tax=Clostridium
scindens ATCC 35704 RepID=B0NHX5_EUBSP
Length=277
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
YVRD V + +++ GIC+ C K APF DGNP+LE HH+I L+ GGAD+ +N VALC
Sbjct 191 YVRDRYVSEYAKRRAHGICQLCDKPAPFSDCDGNPFLETHHIIWLADGGADSIENTVALC 250
Query 249 PNCHRELHYSKNAKELIEML 268
PNCHR++H + N E +E L
Sbjct 251 PNCHRKMH-TLNLSEDVEKL 269
> UniRef100_A6VSV6 HNH endonuclease n=1 Tax=Marinomonas sp. MWYL1
RepID=A6VSV6_MARMS
Length=240
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLN-DGNPYLEVHHVIPLSSGGADTTDNCVA 246
VY R+P V L+++ G+CE CGK APF + DG+PYLEVHH+ L+ G DT +N A
Sbjct 169 VYQRNPDVITETLERAAGVCERCGKGAPFIRSKDGSPYLEVHHIQRLADNGPDTLENTKA 228
Query 247 LCPNCHRELHY 257
LCPNCHRELH+
Sbjct 229 LCPNCHRELHF 239
> UniRef100_A4SC99 HNH endonuclease n=1 Tax=Chlorobium phaeovibrioides
DSM 265 RepID=A4SC99_PROVI
Length=222
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query 139 SIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAW 198
++I E +E+++ D S+ R +++ ++P Y R+P +
Sbjct 111 ALIETETAEIAKSRTDTSV--ARNERILN-------AEKRPKRQRVYSYTYQRNPDIVVE 161
Query 199 ILQQSKGICENCGKNAPF-YLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
L +++G CENC APF +DG P+LEVHH+ LS GG DT +N VALCPNCHRE HY
Sbjct 162 ALHRAEGFCENCKNPAPFKRASDGTPFLEVHHIRSLSDGGEDTLENVVALCPNCHREKHY 221
> UniRef100_C4SUH5 Restriction endonuclease n=1 Tax=Yersinia frederiksenii
ATCC 33641 RepID=C4SUH5_YERFR
Length=238
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%), Gaps = 0/70 (0%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
+ R+P+V A +L + G C++C ++APF DG PYLEVHHV L++GG D+ +N +AL
Sbjct 158 TFKRNPLVVAEVLALAGGKCQSCLRDAPFKREDGRPYLEVHHVEWLANGGEDSVENAIAL 217
Query 248 CPNCHRELHY 257
CPNCHRE HY
Sbjct 218 CPNCHREAHY 227
> UniRef100_A1HS87 HNH endonuclease n=1 Tax=Thermosinus carboxydivorans
Nor1 RepID=A1HS87_9FIRM
Length=275
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query 157 LLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPF 216
L N ++K K++ S+ R V +Y R+ V + +++ GIC+ C + APF
Sbjct 163 LDNETLAKRAKESQSEKTSVRNAVTT-----IYERNAYVSEYAKRRANGICQLCEREAPF 217
Query 217 YLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
DG PYLE HH+ LS GG DT DN VALCPNCHR++H
Sbjct 218 KNKDGEPYLETHHIEWLSRGGTDTLDNTVALCPNCHRKMH 257
> UniRef100_B5EI94 HNH endonuclease n=1 Tax=Geobacter bemidjiensis
Bem RepID=B5EI94_GEOBB
Length=233
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 0/128 (0%)
Query 150 QPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICEN 209
+PT +E ++ S I P+G +P Y RD V+A+++ ++KG CE
Sbjct 95 EPTMNEEKVHEFASNAINDLDEIPQGVAEPERSSHTTSSYARDHKVRAYVIARAKGTCEY 154
Query 210 CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLY 269
CG+ N + YLE HHVI L+ G DT DN +ALCP H+E H+ N E+ E +
Sbjct 155 CGELGFLMSNGKSYYLEAHHVIALADEGRDTPDNVIALCPKHHKEAHFGINRDEIEEEMM 214
Query 270 VNINRLQK 277
+ ++ L K
Sbjct 215 IFLSTLSK 222
> UniRef100_F7PHF3 HNH endonuclease n=1 Tax=Halorhabdus tiamatea
SARL4B RepID=F7PHF3_9EURY
Length=150
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query 175 GSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLS 234
G R+ E Q Y R +VK + L+ + G+C+ G APF DG P+LEVH++ S
Sbjct 33 GDRRTT-TESSQTQYRRPEIVKQYALRVADGVCQGGGDEAPFLDEDGEPFLEVHYLHRRS 91
Query 235 SGGADTTDNCVALCPNCHRELHYSKNAKELIEML 268
GGAD DN VALCPNCHR +HY +N + L
Sbjct 92 DGGADHPDNVVALCPNCHRRVHYEQNGDAFNQQL 125
> UniRef100_D4M0M6 Restriction endonuclease n=1 Tax=Ruminococcus
torques L2-14 RepID=D4M0M6_9FIRM
Length=324
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query 178 KPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGG 237
KP + V+ RDP++ A + +++ G C+ CG+ APF +G PYLE HH++ L+ GG
Sbjct 221 KPGKSRVNTTVFNRDPVIAAAVKERANGQCDLCGQPAPFNNANGFPYLEEHHLVRLADGG 280
Query 238 ADTTDNCVALCPNCHRELHY---SKNAKELIEMLYVNINRLQK 277
D+ DN VALCPNCHR++H ++ + L + + V +N + K
Sbjct 281 DDSIDNAVALCPNCHRKMHVVNDERDTETLKKRILVYVNAMNK 323
> UniRef100_E1VP42 Probable endonuclease n=1 Tax=gamma proteobacterium
HdN1 RepID=E1VP42_9GAMM
Length=285
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPF-YLNDGNPYLEVHHVIPLSSGGADTTDNCVA 246
VY R+P V +L ++KG+CE C APF D PYLEVHH + L+ GG DT +N VA
Sbjct 210 VYERNPYVVVEVLNRAKGMCERCKSQAPFKRRKDNTPYLEVHHRVRLADGGEDTVENAVA 269
Query 247 LCPNCHRELHYSK 259
LCPNCHR LH+ +
Sbjct 270 LCPNCHRLLHFGR 282
> UniRef100_A3XSF8 HNH endonuclease n=1 Tax=Vibrio sp. MED222 RepID=A3XSF8_9VIBR
Length=273
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query 144 ELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQS 203
++S L++PT +SL +R L L K E+L V R +K + +++
Sbjct 145 KVSYLTKPTKSKSLKQLRDIALASTPL-------KADPKEQLTHVKYRSEAIKLYAKKRA 197
Query 204 KGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKE 263
G+CE CG +PF G PYLEVHH+ L+ GGAD +N +ALCP CHR+ HYS A +
Sbjct 198 NGLCEGCGVPSPFETKSG-PYLEVHHLTRLADGGADCPENVIALCPTCHRKAHYSVEAAD 256
Query 264 L 264
Sbjct 257 F 257
> UniRef100_C7HJ98 HNH endonuclease n=2 Tax=Clostridium thermocellum
RepID=C7HJ98_CLOTM
Length=276
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 50/69 (72%), Gaps = 0/69 (0%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
V++RD V + +++ G+C+ CG+ APF +G PYLE HH+ LS GG+DT +N VAL
Sbjct 187 VFIRDAFVAEYAKRRANGVCQLCGQKAPFNNKEGIPYLECHHIEWLSEGGSDTIENTVAL 246
Query 248 CPNCHRELH 256
CPNCHR++H
Sbjct 247 CPNCHRKMH 255
> UniRef100_C6ANH6 HNH nuclease n=1 Tax=Aggregatibacter aphrophilus
NJ8700 RepID=C6ANH6_AGGAN
Length=194
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Query 176 SRKPVE--VERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDG-NPYLEVHHVIP 232
S+ P++ +E LQ + R+P V A +L ++ G CE C K APF PYLEVHH+IP
Sbjct 111 SKHPIKKIIEVLQ--FQRNPDVVAEVLVRANGYCEKCKKPAPFIRKANLQPYLEVHHIIP 168
Query 233 LSSGGADTTDNCVALCPNCHRELHY 257
LS G DT +NC+ALCPNCHR+ H+
Sbjct 169 LSKDGEDTVENCMALCPNCHRQEHF 193
> UniRef100_F4DT09 Putative restriction endonuclease n=1 Tax=Pseudomonas
mendocina NK-01 RepID=F4DT09_PSEMN
Length=244
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 8/117 (6%)
Query 157 LLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPF 216
L + V KL K+ G+R + + +V + + ++KG CE CG+ APF
Sbjct 133 LSDTEVEKLAKQQGQAKVGTRTVSATQHQRSAWVAENARR-----RAKGHCELCGEPAPF 187
Query 217 YLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY---SKNAKELIEMLYV 270
DG+PYLE HH+ L++GGADT +N VALCPNCHR++H S + K LIE + +
Sbjct 188 KRKDGSPYLETHHIEWLANGGADTVENTVALCPNCHRKMHIVNASADQKILIEKVTI 244
> UniRef100_F2JIV4 HNH endonuclease n=1 Tax=Clostridium lentocellum
DSM 5427 RepID=F2JIV4_CELLD
Length=392
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query 192 DPMVKAWILQQSKGICENCGKNAPFYLN-DGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
+P+V A L +KG CE CG+ APF DG PYLEVHH+ ++ GG DT DN +ALCPN
Sbjct 322 NPVVIATRLALAKGKCEKCGQEAPFISALDGMPYLEVHHIKSIAEGGEDTVDNTIALCPN 381
Query 251 CHRELHYSK 259
CH+E+H+ +
Sbjct 382 CHKEIHFGR 390
> UniRef100_A3JQK6 HNH nuclease n=1 Tax=Rhodobacteraceae bacterium
HTCC2150 RepID=A3JQK6_9RHOB
Length=371
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 8/128 (6%)
Query 137 WASIIRGE--LSELSQPTDDESLLNMRVSKLIK-----KTLSQPEGSRKPVEVERLQKVY 189
W +++ LS+L E+ L +V K +K + + + P + + ++
Sbjct 236 WFTLVEWSDGLSDLQSVAAAETSLVEQVQKSLKLDPKARQKRLADAPKLPEKQKATTTIF 295
Query 190 VRDPMVKAWILQQSKGICENCGKNAPF-YLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
R+P V A +L ++ G CE C ++APF +DG PYLEVHH IPL+ G D+ DN VALC
Sbjct 296 KRNPDVIAEVLFRANGTCEGCRQSAPFDRRSDGTPYLEVHHKIPLAKDGHDSVDNAVALC 355
Query 249 PNCHRELH 256
PNCHR H
Sbjct 356 PNCHRREH 363
> UniRef100_F0HDL9 HNH endonuclease domain protein n=1 Tax=Turicibacter
sp. HGF1 RepID=F0HDL9_9FIRM
Length=297
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query 179 PVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNP-YLEVHHVIPLSSGG 237
P + + K+Y R+P V L+++ G CE CG APF NP YLEVHH IPLS+GG
Sbjct 216 PERITIVSKIYKRNPAVVIATLRRANGYCEKCGCTAPFNRKSDNPPYLEVHHNIPLSNGG 275
Query 238 ADTTDNCVALCPNCHRELHY 257
D +N +A+CPNC+RE H+
Sbjct 276 LDDLENTIAVCPNCYREFHF 295
> UniRef100_D0X1J0 Putative uncharacterized protein n=1 Tax=Vibrio
alginolyticus 40B RepID=D0X1J0_VIBAL
Length=277
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQ 202
G+ L++PT +SL +R I ++ + K E++ V R +K + ++
Sbjct 144 GKAPYLTKPTKSKSLKQLRD---IATAVTPNDVDVK----EQVAHVRYRSEAIKLYAKKR 196
Query 203 SKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAK 262
+ GICE C +PF G PYLEVHH+ L+ GGAD +N +ALCP CHR HYS ++K
Sbjct 197 ANGICEGCRIGSPFETKAG-PYLEVHHLTRLADGGADCPENVIALCPTCHRRAHYSIDSK 255
Query 263 ELIEML 268
E E L
Sbjct 256 EFNEQL 261
> UniRef100_G1UXR3 Putative uncharacterized protein n=1 Tax=Bilophila
sp. 4_1_30 RepID=G1UXR3_9DELT
Length=274
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 75/126 (59%), Gaps = 9/126 (7%)
Query 145 LSELSQPTDDESLLNMRVSKLIKKTLSQPE--GSRKPVEVERLQKVYVRDPMVKAWILQQ 202
L +L+Q ++ + V++L K+ S P+ GS++ V + R+P V ++
Sbjct 146 LEQLAQHKAKQAK-KLSVAELRKRVQSAPKIPGSQRTKTV-----AFQRNPYVCELAQRR 199
Query 203 SKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAK 262
+ G+C+ C + APF D +PYLEVHHVI LS+GG D+ N VALCPNCHR++H K
Sbjct 200 ANGVCQLCQQPAPFSRKDHSPYLEVHHVIWLSAGGEDSLSNTVALCPNCHRKMHVLAR-K 258
Query 263 ELIEML 268
E +E L
Sbjct 259 EDVEQL 264
> UniRef100_C2WFU8 Restriction endonuclease n=1 Tax=Bacillus cereus
Rock3-44 RepID=C2WFU8_BACCE
Length=254
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 7/145 (4%)
Query 134 DSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQ-KVYVRD 192
D ++II EL L Q D + R++ K +Q E S V V +Q K + R+
Sbjct 111 DDKASTIINEEL--LKQNYDKKEQKARRLTNEEVKNKAQ-EASSNRVGVRNIQSKTFDRN 167
Query 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P V + + + GIC+ C K APF +G PYLE HH+ LS GG D+ +N VALCPNCH
Sbjct 168 PYVTIYAKRWADGICQLCEKPAPFINKEGEPYLETHHIEWLSQGGPDSIENTVALCPNCH 227
Query 253 RELHY--SKNAKE-LIEMLYVNINR 274
+++H S++ K+ L++ ++ NI++
Sbjct 228 KKMHVVDSQDDKDKLLKKVHQNISQ 252
> UniRef100_E6VA78 HNH nuclease n=1 Tax=Variovorax paradoxus EPS
RepID=E6VA78_VARPE
Length=282
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query 138 ASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKA 197
A + + EL+ +S+P D +L R + + + +R + +Y R +V+
Sbjct 144 ARLEQDELTGISEPLIDLTLDEARRRAIAAAKVDASKDTRHG-----RRTIYERSRIVRD 198
Query 198 WILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
++L+++ GICE C K+APF G+ YLE HH +S GG D ALCP CHRE+HY
Sbjct 199 YVLRRASGICELCEKSAPFRRTGGSAYLEPHHTTRVSDGGPDHPQFVAALCPACHREVHY 258
Query 258 SKNA----KELIEMLYV 270
+ A KELIE L +
Sbjct 259 GEYAQTRNKELIERLLI 275
> UniRef100_C2KXT9 Putative uncharacterized protein n=1 Tax=Oribacterium
sinus F0268 RepID=C2KXT9_9FIRM
Length=324
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query 168 KTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEV 227
K + +K EVE +Q R +V + + +++ G+C+ C K APFY G YLE
Sbjct 222 KDFDKQHPKKKLTEVEVVQ----RSSLVSSIVKERAAGVCQLCNKPAPFYNKSGEAYLEC 277
Query 228 HHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKEL 264
HHV+ ++ GGAD +N VALCPNCHR++H +++++
Sbjct 278 HHVVWIAKGGADEVNNAVALCPNCHRKMHILDDSEDV 314
> UniRef100_Q1QEV2 HNH endonuclease n=1 Tax=Psychrobacter cryohalolentis
K5 RepID=Q1QEV2_PSYCK
Length=282
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 14/124 (11%)
Query 148 LSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEV---ERLQKVYVRDPMVKAWILQQSK 204
+++P+ +SL +R L S P E++Q + R +K + +++
Sbjct 157 VTKPSKGKSLQQLREIAL----------SSTPTHASTQEKIQSIQNRSTAIKLYAKKRAN 206
Query 205 GICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKEL 264
GICE C + APF G PYLEVHH+ L+ GGAD N +ALCP CHR+ HYS N E
Sbjct 207 GICEGCNEIAPFETKSG-PYLEVHHLTRLADGGADLPQNVIALCPTCHRKAHYSLNHLEF 265
Query 265 IEML 268
L
Sbjct 266 NNQL 269
> UniRef100_F2G2V6 HNH nuclease n=1 Tax=Alteromonas macleodii str.
'Deep ecotype' RepID=F2G2V6_ALTMD
Length=199
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query 180 VEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPF-YLNDGNPYLEVHHVIPLSSGGA 238
VEV LQ R+P V A +L ++KGIC +C APF DG+PYLEVHH+ L+ GG
Sbjct 124 VEVSVLQ----RNPDVVAEVLFRAKGICGSCKNPAPFSRRKDGSPYLEVHHIQQLAHGGE 179
Query 239 DTTDNCVALCPNCHRELHY 257
DT +N +ALCPNCHR+ H+
Sbjct 180 DTLENAIALCPNCHRQKHF 198
> UniRef100_C0WRI9 Possible HNH endonuclease n=1 Tax=Lactobacillus
buchneri ATCC 11577 RepID=C0WRI9_LACBU
Length=193
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Query 140 IIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEV-ERLQKVYVRDPMVKAW 198
I E+ S+ ++++ M + KLI+ + +G E ++VR+ +
Sbjct 49 IANKEVLHQSEIKQEQAVKKMPIKKLIESVKTHEQGKTAKTSCREVTTTMFVRNANNRHL 108
Query 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
L SKG+C+ CG+ APF G PYLEVHH+ S GG D +N +A+CPNCHR++H
Sbjct 109 ALYFSKGVCQLCGEPAPFKDKTGQPYLEVHHIDWFSQGGKDVIENEIAICPNCHRKMHII 168
Query 259 KNAKELI 265
++ +++
Sbjct 169 QDPNDVL 175
> UniRef100_D4SNG2 Putative restriction endonuclease n=1 Tax=Enterococcus
faecium E1039 RepID=D4SNG2_ENTFC
Length=341
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query 187 KVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVA 246
K+Y R+P V ++ + +KGIC+ C + PF + DG PYL HH+ LS GG D +NC+A
Sbjct 247 KIYKRNPFVSEYVKRLAKGICQLCQEKGPF-IKDGVPYLHCHHIEYLSQGGKDVIENCIA 305
Query 247 LCPNCHRELH 256
LCPNCH +H
Sbjct 306 LCPNCHARIH 315
> UniRef100_A2PX36 HNH endonuclease (Fragment) n=1 Tax=Vibrio cholerae
MZO-3 RepID=A2PX36_VIBCH
Length=263
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query 183 ERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
E++ + R +K + +++ G+CE CG +PF G PY+EVHH+ L+ GGAD +
Sbjct 167 EQVTHIRYRSEDIKLYAKKRANGVCEACGSKSPFETKTG-PYIEVHHLTRLADGGADCPE 225
Query 243 NCVALCPNCHRELHYSKNAKELIEML 268
N +ALCP CHR HYS + KE E L
Sbjct 226 NVIALCPTCHRRAHYSIDNKEFNEKL 251
> UniRef100_C3I9U4 Restriction endonuclease n=1 Tax=Bacillus thuringiensis
IBL 200 RepID=C3I9U4_BACTU
Length=212
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 45/74 (60%), Gaps = 0/74 (0%)
Query 183 ERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
E K YVRD V + +++ GICE C + APF GNPYLE HHV LS GG D+
Sbjct 118 EATTKTYVRDEYVAQYAKERANGICELCDQPAPFLDKKGNPYLESHHVEWLSRGGKDSIY 177
Query 243 NCVALCPNCHRELH 256
N V +C NCHR LH
Sbjct 178 NTVGVCANCHRRLH 191
> UniRef100_F1Z2H1 HNH endonuclease domain protein n=1 Tax=Streptococcus
parauberis NCFD 2020 RepID=F1Z2H1_9STRE
Length=284
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query 155 ESLLNMRVSKLIKKTLS-QPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN 213
+++ N S+L+ K LS E ++ + + +VY R+P ++ ++ + GIC+ C +
Sbjct 163 KTVKNFSQSELLTKALSYSKENAQNTIFRKVSTQVYDRNPYIREYVKSLAHGICQLCQQP 222
Query 214 APFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
APF + DG P+L VHH+ L++GG DT +N +A+CPNCH +H
Sbjct 223 APFEV-DGEPFLHVHHIEYLANGGHDTIENSIAICPNCHYRIH 264
> UniRef100_C0N619 HNH endonuclease domain protein n=1 Tax=Methylophaga
thiooxydans DMS010 RepID=C0N619_9GAMM
Length=274
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query 155 ESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNA 214
+SLL +R + L K + ++ ER Q Y R ++ ++ +++ G CE C A
Sbjct 157 KSLLELREAALEKPSHTKNAS-------ERRQSAYYRSKALRLYVRKRAGGKCEACAVPA 209
Query 215 PFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINR 274
PF G PY+E HH+ ++ GG D N + LCPNCHR HY+KN +E + L +
Sbjct 210 PFESRKG-PYIECHHLHRVADGGPDHPMNVIGLCPNCHRRAHYAKNFREFNDSLKPVVRE 268
Query 275 LQK 277
L+K
Sbjct 269 LEK 271
> UniRef100_C3C627 Restriction endonuclease n=1 Tax=Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1 RepID=C3C627_BACTU
Length=333
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query 159 NMRVSKLIKKTLSQPEGSRKPVEVERLQKV--YVRDPMVKAWILQQSKGICENCGKNAPF 216
N + KL + L + P +R K Y R+ V + +++ GICE C + APF
Sbjct 210 NKKARKLDYQKLKERAKKATPSSNKRYTKTETYQRNEFVAEFSKRRANGICELCEQQAPF 269
Query 217 YLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEM 267
+GNPYLE HHV LS GG DT N V +C NCHR LH + +++++
Sbjct 270 EDKEGNPYLESHHVEWLSEGGEDTIYNTVGVCANCHRRLHVLNDENDVMKL 320
> UniRef100_E3H995 HNH endonuclease n=1 Tax=Ilyobacter polytropus
DSM 2926 RepID=E3H995_ILYPC
Length=355
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 12/118 (10%)
Query 139 SIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAW 198
+II +++ + +D++ + N+ S+ + S++ VE Y R+ V +
Sbjct 229 NIIEKRENKIRKLSDEQLIKNIANSRKV--------SSKRNVET----TTYERNQHVVEY 276
Query 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+++KG CE C + APF D PYLEVHH+ LS+GG D+ N ALCPNCHR++H
Sbjct 277 AKRRAKGKCELCEEEAPFLTKDKQPYLEVHHIQWLSNGGEDSITNVAALCPNCHRKMH 334
> UniRef100_G2RPA5 HNH endonuclease n=1 Tax=Bacillus megaterium
WSH-002 RepID=G2RPA5_BACME
Length=269
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 0/92 (0%)
Query 183 ERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
E+ VY + +K ++ +++ GICE CG++APF DG+ +L+++++ LS GG
Sbjct 170 EKKASVYEQTAALKQYVHKRAAGICEACGESAPFIAKDGSSFLQMYYLSKLSEGGLAKPK 229
Query 243 NCVALCPNCHRELHYSKNAKELIEMLYVNINR 274
+ ALCPNCH L Y K+++ E L + IN+
Sbjct 230 DAAALCPNCHSRLRYGKDSEVYKEELIIKINK 261
> UniRef100_B7S191 HNH endonuclease domain protein n=1 Tax=marine
gamma proteobacterium HTCC2148 RepID=B7S191_9GAMM
Length=273
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 0/81 (0%)
Query 187 KVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVA 246
K Y RDP + + +++ G C+ C +APF G PYLE HH+ L++GG D+ N VA
Sbjct 185 KYYERDPWISEYAKRRAGGKCQLCESDAPFISKAGEPYLETHHIEWLANGGEDSISNTVA 244
Query 247 LCPNCHRELHYSKNAKELIEM 267
LCPNCHR++H + +++++
Sbjct 245 LCPNCHRKMHNIADNNDVVKL 265
> UniRef100_Q080H4 HNH endonuclease n=1 Tax=Shewanella frigidimarina
NCIMB 400 RepID=Q080H4_SHEFN
Length=309
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQ 202
GE++E + +DDE L ++ ++ + P + Y R VK + L+
Sbjct 184 GEINEATFISDDE---------LWERICTENPKRKSPKKTTTETVGYERSEFVKEYALRH 234
Query 203 SKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAK 262
+ G C+ C PF G +LEVHH+ LS GG D +N V LCPNCHR++H +AK
Sbjct 235 ANGKCQLCNNAGPFATKSGRNFLEVHHIDWLSKGGLDMPENVVGLCPNCHRKMHNINDAK 294
Query 263 ELIEM 267
++ ++
Sbjct 295 DIKKL 299
> UniRef100_Q4A110 Putative restriction endonuclease n=1 Tax=Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A110_STAS1
Length=328
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 0/74 (0%)
Query 183 ERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
E + KVY R+ V A + +S G C+ C K APF +G YLE HHV L++GG D+ D
Sbjct 232 EAVTKVYARNIHVAAHVKNRSNGYCDLCNKPAPFKDRNGRAYLECHHVDWLANGGKDSID 291
Query 243 NCVALCPNCHRELH 256
N VAL PNCHR++H
Sbjct 292 NAVALDPNCHRKMH 305
> UniRef100_C2Z778 Restriction endonuclease n=2 Tax=Bacillus cereus
RepID=C2Z778_BACCE
Length=331
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query 179 PVEVERLQKV--YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSG 236
PV +R K Y R+ V + +++ GICE C + APF GNPYLE HHV LS G
Sbjct 228 PVSNKRYTKTETYQRNEFVAEFSKRRANGICELCEQKAPFEDKKGNPYLESHHVEWLSEG 287
Query 237 GADTTDNCVALCPNCHRELH 256
G DT N V +C NCHR LH
Sbjct 288 GEDTIYNTVGVCANCHRRLH 307
> UniRef100_D2S1X8 HNH endonuclease n=1 Tax=Haloterrigena turkmenica
DSM 5511 RepID=D2S1X8_HALTV
Length=84
Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 0/74 (0%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
++ + LQ + G+C+ C +APF +D +LEVHH+ S+GGAD N +ALCPNCHR
Sbjct 1 MRKYALQVADGVCQGCSDDAPFLTDDRESFLEVHHLRRRSNGGADHPKNVIALCPNCHRR 60
Query 255 LHYSKNAKELIEML 268
+H+ +N E E L
Sbjct 61 VHHGRNGDEFNEDL 74
> UniRef100_G0ERW2 Putative uncharacterized protein n=1 Tax=Cupriavidus
necator N-1 RepID=G0ERW2_CUPNE
Length=420
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query 150 QPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICEN 209
+ TDD + ++ ++ K+ + S + L+K+Y R VK ++L +++GICE+
Sbjct 291 EATDDPAPTSLEEAR--KRAIEAIHNSSDEMGKAALRKLYRRSKRVKDYVLLRAEGICES 348
Query 210 CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKE 263
C + APF DG+ YLE HH +S GG D A+CP CHR +H+ E
Sbjct 349 CQQPAPFKRKDGSAYLEPHHTTRVSDGGLDHPRYVAAICPACHRHIHHGIGGDE 402
> UniRef100_C9BZK6 Restriction endonuclease (Fragment) n=2 Tax=Enterococcus
faecium RepID=C9BZK6_ENTFC
Length=96
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y R+P V ++ + +KGIC+ C + PF + DG PYL HH+ LS GG D +NC+ALC
Sbjct 4 YKRNPFVSEYVKRLAKGICQLCQEKGPF-IKDGVPYLHCHHIEYLSQGGKDVIENCIALC 62
Query 249 PNCHRELH 256
PNCH +H
Sbjct 63 PNCHARIH 70
> UniRef100_Q0BZ66 Conserved domain protein n=1 Tax=Hyphomonas
neptunium ATCC 15444 RepID=Q0BZ66_HYPNA
Length=343
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query 139 SIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAW 198
++ E E + D S+ ++R S T + + P E R+ + R +KA+
Sbjct 206 AVADSETDEEIEDQPDTSIDDLRTSAYEAATAVR---NSNPKEARRVYRQ--RSAKIKAY 260
Query 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
IL ++ G+CE G+ APF G+PYLEVHH LS G D A+ P HRE+H+
Sbjct 261 ILARAGGVCELTGEKAPFLTKSGHPYLEVHHTQRLSDDGLDHPRWVAAISPTAHREIHFG 320
Query 259 KNAKELIEML 268
+ EL E L
Sbjct 321 ERGDELNERL 330
> UniRef100_C4WNE8 Putative uncharacterized protein n=1 Tax=Ochrobactrum
intermedium LMG 3301 RepID=C4WNE8_9RHIZ
Length=282
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query 145 LSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSK 204
L + + DDE + ++ Q GSR+ R +Y R V+ ++L ++
Sbjct 148 LENIVEAVDDEQPVPAVDLAAMRDLARQAAGSREGKASTR--TIYERSRHVRDYVLARAN 205
Query 205 GICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKEL 264
G CE C APF +G PYLE HH+ +S GG D +ALCP CHR++H+ +
Sbjct 206 GHCEGCSCQAPFLRINGQPYLEPHHIRRVSDGGPDDPSYVIALCPTCHRKVHHGQGGATY 265
Query 265 IEML 268
+ L
Sbjct 266 NDTL 269
> UniRef100_F9VAG0 Endonuclease n=2 Tax=Lactococcus garvieae RepID=F9VAG0_LACGT
Length=292
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 0/93 (0%)
Query 183 ERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
E L K Y R+ + A++ + + GIC C APF +G P+L HH+ LS GG D +
Sbjct 195 EVLVKDYERNINIAAYVKKMANGICALCKLPAPFISKNGEPFLHAHHIEYLSKGGKDILE 254
Query 243 NCVALCPNCHRELHYSKNAKELIEMLYVNINRL 275
NC+A+CPNCH ++H ++ ++++++ RL
Sbjct 255 NCIAVCPNCHAKIHNLEDEEDVLKLRQAVAERL 287
> UniRef100_D5DUC9 Putative uncharacterized protein n=1 Tax=Bacillus
megaterium QM B1551 RepID=D5DUC9_BACMQ
Length=269
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 0/91 (0%)
Query 183 ERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
E+ VY + +K ++ +++ GICE CG++APF DG+ +L+++++ LS G
Sbjct 170 EKKTSVYEQTAALKQYVHKRAAGICEACGESAPFIAKDGSSFLQMYYLSKLSESGLAKPK 229
Query 243 NCVALCPNCHRELHYSKNAKELIEMLYVNIN 273
+ ALCPNC+ L Y K+++ E L IN
Sbjct 230 DAAALCPNCYSRLRYGKDSEVYKEELITKIN 260
> UniRef100_D5DGC4 Putative uncharacterized protein n=1 Tax=Bacillus
megaterium DSM 319 RepID=D5DGC4_BACMD
Length=269
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 0/91 (0%)
Query 183 ERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
E+ VY + K ++ +++ GICE CG++APF DG+ +L+++++ LS G
Sbjct 170 EKKTSVYEQTAAFKQYVHKRAAGICEACGESAPFIAKDGSSFLQMYYLSKLSESGLAKPK 229
Query 243 NCVALCPNCHRELHYSKNAKELIEMLYVNIN 273
+ ALCPNC+ L Y K+++ E L IN
Sbjct 230 DAAALCPNCYSRLRYGKDSEVYKEELITKIN 260
> UniRef100_F9RLP2 HNH endonuclease n=1 Tax=Vibrio scophthalmi
LMG 19158 RepID=F9RLP2_9VIBR
Length=286
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query 168 KTLSQPEGSRKPVEVERLQKVYVRDPMV---KAWILQQSK----GICENCGKNAPFYLND 220
K LS E +R+ + +R V + W+ + +K GIC+ C APF
Sbjct 161 KKLSYAELARRAYQSKRKTSVTKSTATIYERNVWVTEHAKRLASGICQLCMNEAPFSTPK 220
Query 221 GNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRL 275
G PYLE HH+ LS G DT N +ALCPNCH+++H + + ++ L+ +N L
Sbjct 221 GVPYLETHHIQWLSRSGDDTPHNTIALCPNCHKKMHIL-DLQTDVDFLFQRLNTL 274
> UniRef100_E6RKZ3 Restriction endonuclease-like protein n=1 Tax=Pseudoalteromonas
sp. SM9913 RepID=E6RKZ3_PSEU9
Length=277
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query 181 EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT 240
E E+ Y R +++ +L +S G CE C + F N G+ YLE HH++PLS GG D+
Sbjct 178 EYEKYGVEYARSSVIRRKVLLRSNGKCEYCLSDG-FITNSGDKYLETHHILPLSQGGDDS 236
Query 241 TDNCVALCPNCHRELHYSKNA 261
N +ALCP HR+ H+ K++
Sbjct 237 FINVIALCPKDHRKAHFEKDS 257
> UniRef100_A9F818 Putative restriction endonuclease n=1 Tax=Phaeobacter
gallaeciensis 2.10 RepID=A9F818_9RHOB
Length=220
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
V+VR+ + Q + G+C+ C K F G+ +LEVHH LS GG DT +N VAL
Sbjct 146 VFVRNSEFSRRVRQAANGVCDAC-KGKTFQTQSGDWFLEVHHKKWLSEGGTDTIENMVAL 204
Query 248 CPNCHRELHY 257
CPNCHR+ H+
Sbjct 205 CPNCHRQEHF 214
> UniRef100_B5HVM7 Putative uncharacterized protein n=1 Tax=Streptomyces
sviceus ATCC 29083 RepID=B5HVM7_9ACTO
Length=481
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query 148 LSQPTDDESLLNM--RVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKG 205
L PT +ES + R+++ + + G +KP L YVRDP +A ++++ +G
Sbjct 348 LEAPTTEESDEDAYRRLAQKAEANAERRRGLKKPT----LADKYVRDPSARAAVIKRCRG 403
Query 206 ICEN--CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKE 263
CEN C + G P L+V HV L+ G D N +ALCPNCH Y +N +
Sbjct 404 RCENPQCAGHPTELTTAGLPILQVDHVKDLAKKGPDVPWNMIALCPNCHALKTYGENREN 463
Query 264 LIEMLYVNINRLQK 277
L +L RL +
Sbjct 464 LRRLLTATARRLHE 477
> UniRef100_D5SZP5 Putative restriction endonuclease n=1 Tax=Leuconostoc
kimchii IMSNU 11154 RepID=D5SZP5_LEUKI
Length=288
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 0/75 (0%)
Query 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
+ R P + ++ + G C C + APF P+L HH+ LS GG DT +NC+A+C
Sbjct 203 FERSPYIANYVKHIANGYCSLCEQLAPFLDKYNQPFLHAHHINYLSDGGEDTIENCIAVC 262
Query 249 PNCHRELHYSKNAKE 263
PNCH ++H + K+
Sbjct 263 PNCHAKIHALNDPKD 277
> UniRef100_UPI0002193DBB putative restriction endonuclease n=1
Tax=Leuconostoc inhae KCTC 3774 RepID=UPI0002193DBB
Length=288
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 0/75 (0%)
Query 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
+ R P + ++ + G C C + APF P+L HH+ LS GG DT +NC+A+C
Sbjct 203 FERSPYIANYVKHIANGYCSLCEQLAPFLDKYNQPFLHAHHINYLSDGGEDTIENCIAVC 262
Query 249 PNCHRELHYSKNAKE 263
PNCH ++H + K+
Sbjct 263 PNCHAKIHALNDPKD 277
> UniRef100_B1ZMM6 HNH endonuclease n=1 Tax=Opitutus terrae PB90-1
RepID=B1ZMM6_OPITP
Length=279
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R+P V+ W+L++S+G+CE G + +L+VHH++ + G D NCVALCPN
Sbjct 194 RNPKVRRWVLKRSRGVCERLGCHITRSFAG---FLDVHHILGAAKG--DRVWNCVALCPN 248
Query 251 CHRELHYSKNAKEL 264
CHRE H + N K++
Sbjct 249 CHRETHCAPNRKKI 262
> UniRef100_Q1L9I8 HNH endonuclease typeIV restriction enzyme n=1
Tax=Cupriavidus metallidurans CH34 RepID=Q1L9I8_RALME
Length=348
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 17/100 (17%)
Query 175 GSRKPVEVERLQKVYV-RDPMVKAWILQQSKGICEN--CGKNAPFYLNDGNPYLEVHHVI 231
GS P E ++ YV RD V+ +L ++ G+CEN C APF +L+VHH+
Sbjct 248 GSDSP-ERRTAERSYVKRDDRVRRQVLDRADGVCENPTCSIRAPF-----PSFLDVHHIF 301
Query 232 PLSSGGADTTD---NCVALCPNCHRELHYSKNAKELIEML 268
G +T+D NCVA+CPNCHR HY+ + + E L
Sbjct 302 -----GVETSDRAWNCVAICPNCHRAAHYAPDRSAINEEL 336
> UniRef100_A8R8M0 Putative uncharacterized protein n=1 Tax=Eubacterium
dolichum DSM 3991 RepID=A8R8M0_9FIRM
Length=508
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYL-NDGNPYLEVHHVIPLSSG-----GADTT 241
+Y R+ + SK CE K+ F NDG PY+E HH+IP+S D
Sbjct 396 IYKRERKRANNAIIHSKHQCEIDAKHISFKRKNDGFPYMEAHHLIPMSKQDLFEYSLDVE 455
Query 242 DNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
+N V+LC CHRE+H+ +NA LI+ LY + +L K
Sbjct 456 ENIVSLCSQCHREIHHGENADALIKKLYNDRKKLLK 491
> UniRef100_Q3K789 Putative HNH endonuclease n=1 Tax=Pseudomonas
fluorescens Pf0-1 RepID=Q3K789_PSEPF
Length=323
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 13/111 (11%)
Query 162 VSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICE--NCGKNAPFYLN 219
V+ L L + E SR V R+ RDP V+ ++ + G CE CG + +
Sbjct 212 VAGLDLSLLGRDEASRYQATVSRV----ARDPSVRKAVIDRCNGRCERPGCGASRSY--- 264
Query 220 DGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYV 270
+ +L+VHH++ + +D NCVALCPNCHR+ H+S + ++L + L +
Sbjct 265 --SGFLDVHHILGVEI--SDRVANCVALCPNCHRDAHFSADRQKLNDSLLI 311
> UniRef100_Q9L0M9 Putative uncharacterized protein SCO4631 n=1
Tax=Streptomyces coelicolor RepID=Q9L0M9_STRCO
Length=560
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query 189 YVRDPMVKAWILQQSKGICEN--CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVA 246
YVRDP + +L++ + CEN C + G P L+V HV L+ GG D N +A
Sbjct 466 YVRDPSARGAVLKRCQKRCENPECAGHPTELTKAGLPILQVDHVNDLAKGGPDVPWNMIA 525
Query 247 LCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
LCPNCH Y N L +L RL +
Sbjct 526 LCPNCHALKTYGANKVRLQRLLAATARRLHE 556
> UniRef100_B9NKB9 Predicted protein n=1 Tax=Populus trichocarpa
RepID=B9NKB9_POPTR
Length=222
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 17/100 (17%)
Query 175 GSRKPVEVERLQKVYV-RDPMVKAWILQQSKGICEN--CGKNAPFYLNDGNPYLEVHHVI 231
GS P E ++ YV RD V+ +L ++ G+CEN C APF +L+VHH+
Sbjct 122 GSDSP-ERRTAERSYVKRDDRVRRQVLDRADGVCENPTCSIRAPF-----PSFLDVHHIF 175
Query 232 PLSSGGADTTD---NCVALCPNCHRELHYSKNAKELIEML 268
G +T+D NCVA+CPNCHR HY+ + + E L
Sbjct 176 -----GVETSDRAWNCVAICPNCHRAAHYAPDRSAINEEL 210
> UniRef100_B0N4T9 Putative uncharacterized protein n=1 Tax=Clostridium
ramosum DSM 1402 RepID=B0N4T9_9FIRM
Length=329
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query 178 KPVEVE-RLQKVYVRDPMVKAWILQQSKGICE-NCGKNAPFYLNDGNPYLEVHHVIPLS- 234
KP VE + KVY R+ V L + CE + DG PY E HH+IP++
Sbjct 206 KPKLVENKFNKVYKRNKAVAINALGIANFSCEIDKKHKTFKRKKDGVPYTEPHHLIPMAF 265
Query 235 ----SGGADTTDNCVALCPNCHRELHYSKNAKELIEMLY 269
D +N V+LC NCH E+HY +NA+ELI LY
Sbjct 266 QDEFDFSIDIEENIVSLCSNCHNEIHYGENARELITKLY 304
> UniRef100_C2XB44 5-methylcytosine-specific restriction enzyme
A n=1 Tax=Bacillus cereus F65185 RepID=C2XB44_BACCE
Length=166
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query 145 LSELSQPTDD-ESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQS 203
LSE Q D ++ ++ SK+ +PE +RK ++E ++V+ RDP ++Q+
Sbjct 7 LSEDEQEEDMYQANIDSDFSKVKIAEEEKPE-NRKKTKMESGREVWPRDPKKAKQAIKQA 65
Query 204 KGICENCGKNAPFYLNDGNP-YLEVHHVIPLS-----SGGADTTDNCVALCPNCHRELHY 257
+ CE + F Y+E HH+IPL D N V++CPNCHR +HY
Sbjct 66 EFKCEIDDTHETFVSEASRKNYMEAHHLIPLRMQHDFEDSLDVVGNIVSICPNCHRLIHY 125
Query 258 --SKNAKELIEMLY 269
K+ K+++E+L+
Sbjct 126 GRDKDKKKVLELLF 139
> UniRef100_Q0KFQ5 Predicted restriction endonuclease n=1 Tax=Ralstonia
eutropha H16 RepID=Q0KFQ5_CUPNH
Length=371
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN-PYLEVHHVIPLSSGG-----ADTTD 242
Y RDP+V A ++ ++ CE ++ F + N PY+E HH+IPLS D T
Sbjct 251 YPRDPLVAAEAVKSAEYRCELFPEHQTFKSSSKNVPYVEAHHLIPLSRQADFQFSLDITA 310
Query 243 NCVALCPNCHRELHY---SKNAKELIEMLYVNINRLQK 277
N +ALCP CH+ LH+ S+ L +L +RLQ+
Sbjct 311 NIIALCPTCHQRLHHGHASERRSPLRRLLSQRKDRLQE 348
> UniRef100_A3US95 Putative restriction endonuclease n=1 Tax=Vibrio
splendidus 12B01 RepID=A3US95_VIBSP
Length=259
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query 153 DDESLLNMRVSKLIKKTLSQ-----PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGIC 207
D +S+ ++RV K K T+ + +G + ++ Y R+ V + +KG C
Sbjct 146 DRDSVESVRVRKAKKLTVEELQALAAKGRKTATRYQQKSTSYERNIWVAELAKRLAKGQC 205
Query 208 ENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
+ C K APF G PYLE HH+ LS GG DT +N + P +E +S
Sbjct 206 QLCLKPAPFKNTKGEPYLETHHIAWLSKGGEDTAENTSRIVPQLPQENAHS 256
> UniRef100_C2U711 Putative uncharacterized protein n=1 Tax=Bacillus
cereus Rock1-3 RepID=C2U711_BACCE
Length=72
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 0/47 (0%)
Query 210 CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
C ++APF GNPYLE HHV L+ G DT N V +C NCHR+LH
Sbjct 2 CEQHAPFQDKKGNPYLEAHHVKWLAEDGEDTIYNTVGVCANCHRKLH 48
> UniRef100_C2RME9 5-methylcytosine-specific restriction enzyme
A n=3 Tax=Bacillus cereus RepID=C2RME9_BACCE
Length=130
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query 163 SKLIKKTLSQPEGS--RKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLND 220
S K +++ E S RK ++E ++V+ RDP ++Q++ CE + F
Sbjct 13 SDFSKVKIAEEEKSENRKKTKMESGREVWPRDPKKAKQAIKQAEFKCEIDDTHETFVSEA 72
Query 221 GNP-YLEVHHVIPLS-----SGGADTTDNCVALCPNCHRELHY--SKNAKELIEMLY 269
Y+E HH+IPL D N V++CPNCHR +HY K+ K+++E+L+
Sbjct 73 SRKNYMEAHHLIPLRMQHDFENSLDVVGNIVSICPNCHRLIHYGRDKDKKKVLELLF 129
> UniRef100_E0ID74 Putative uncharacterized protein n=1 Tax=Paenibacillus
curdlanolyticus YK9 RepID=E0ID74_9BACL
Length=298
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query 179 PVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGG- 237
P E L+ Y R V L++++ CE + F G P++E HH+IP+S G
Sbjct 174 PTETTVLR--YPRKASVALEALEKARYCCEVDPTHKTFIGVSGKPFMECHHLIPISLQGR 231
Query 238 ----ADTTDNCVALCPNCHRELHYSKNAKEL 264
D +N V+LCP CHR LHYS +L
Sbjct 232 FSVSLDICENIVSLCPTCHRLLHYSSEPSKL 262
> UniRef100_D1NJY2 Transcriptional regulator, XRE family n=1 Tax=Clostridium
thermocellum JW20 RepID=D1NJY2_CLOTM
Length=446
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN-PYLEVHHVIPLSSGGA-----DTTD 242
++R+P V L++++ CE + F N PY+E HH+IP+S+ D T
Sbjct 332 FLRNPKVAIQALKKAQYKCEINDAHETFIAKSSNKPYVESHHLIPISNSAMFGFSIDITA 391
Query 243 NCVALCPNCHRELHYSKN--AKELIEMLY 269
N +LCPNCHR +H + + +E++ LY
Sbjct 392 NICSLCPNCHRAIHSATDEVKREMLTKLY 420
> UniRef100_D6X7U9 Predicted protein n=1 Tax=Streptomyces pristinaespiralis
ATCC 25486 RepID=D6X7U9_STRPR
Length=239
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query 190 VRDPMVKAWILQQSKGICEN--CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
VR + + +L +S+G CEN CG + G P LEV H++ L+ GG D AL
Sbjct 142 VRSAVARRAVLARSRGACENPACGGRPADVTDAGEPILEVDHIMDLAKGGPDHPSRMAAL 201
Query 248 CPNCH 252
CPNCH
Sbjct 202 CPNCH 206
> UniRef100_D1BJK4 HNH endonuclease n=1 Tax=Sanguibacter keddieii
DSM 10542 RepID=D1BJK4_SANKS
Length=395
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query 164 KLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICEN--CGKNAPFYLN-D 220
+L+++ L+ E + +P V R+ Y R + +L +S G CE+ C P LN
Sbjct 271 ELVRR-LADLERTTEPQTVSRI--AYQRQYAARRAVLIRSAGQCESERC-TGMPAELNRK 326
Query 221 GNPYLEVHHVIPLSSGGADTTDNCVALCPNCH----RELHYSKNAKELIEMLYVNINR 274
G P L+V H++ LS GGAD N VALCPNCH R H + KEL + +R
Sbjct 327 GMPILDVDHIVELSQGGADHPLNMVALCPNCHAAKTRGQHAKRWEKELRRIAQAAHDR 384
> UniRef100_A3U4A6 E14 prophage-like protein n=1 Tax=Oceanicola
batsensis HTCC2597 RepID=A3U4A6_9RHOB
Length=201
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query 161 RVSKLIKKTLSQPEGSRKPVEVERLQKVY---------VRDPMVKAWILQQSKGICENCG 211
R + I L Q + S + EV++ QKV VRD L++ C+ G
Sbjct 58 RTEEAIAADLFQDDSSSE--EVKKTQKVIETFERNRKAVRD-------LKRLYKTCQVTG 108
Query 212 KNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
+ F +G PYLEVHH++PL GG+D N V + + HR LHY+
Sbjct 109 DDFVFSKVNGEPYLEVHHLVPLGEGGSDDPANLVVISAHIHRMLHYA 155
> UniRef100_A0YK66 Putative uncharacterized protein n=1 Tax=Lyngbya
sp. PCC 8106 RepID=A0YK66_LYNSP
Length=245
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query 204 KGICE--NCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
KG C+ +CG F +G+ Y E HH++PLS GG+ N V LCPN HR HY+
Sbjct 166 KGCCQIKDCG--FTFIQKNGDNYAEAHHLVPLSEGGSQDASNVVILCPNHHRMFHYA 220
> UniRef100_E6V7F7 HNH endonuclease n=1 Tax=Variovorax paradoxus
EPS RepID=E6V7F7_VARPE
Length=384
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDG-NPYLEVHHVIPLSSG-----GADTTD 242
Y R+P V L + CE + F + G PYLE HH+IP S+ D
Sbjct 264 YQRNPRVAGNALANADYKCEIDSSHQTFTAHAGEKPYLEAHHLIPFSNQRFFNVSLDVMA 323
Query 243 NCVALCPNCHRELHY---SKNAKELIEMLYVNINRLQK 277
N VALCPNCHR LH+ + +K + +L RL++
Sbjct 324 NVVALCPNCHRLLHHGTTKEKSKHIRALLAKRAERLEE 361
> UniRef100_D3I4N4 5-methylcytosine-specific restriction enzyme
A (EcoKMcrA) (Fragment) n=1 Tax=Prevotella melaninogenica D18
RepID=D3I4N4_9BACT
Length=138
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query 187 KVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGA-------- 238
K+ ++P + L +K C K+ F G PY+E HH+IP + A
Sbjct 18 KMVKKNPKIAKQALAHAKYRCVANPKHITFNTAKGKPYMEGHHLIPCTQSNATLFWQTRN 77
Query 239 ---DTTDNCVALCPNCHRELHYS--KNAKELIEMLY 269
D +N V LCP CHR +HY + K LI+ LY
Sbjct 78 RNIDCENNIVCLCPTCHRRIHYGSIQEKKSLIKTLY 113
> UniRef100_C6LDW0 Product McrA n=1 Tax=Marvinbryantia formatexigens
DSM 14469 RepID=C6LDW0_9FIRM
Length=380
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query 216 FYLNDGNPYLEVHHVIPLSSGGA-----DTTDNCVALCPNCHRELHYS--KNAKELIEML 268
F DG PYLEVHH+IPL A DT N + LCP CHR LH+ + E++ L
Sbjct 297 FLKPDGTPYLEVHHLIPLKQQPAFEYKLDTMANLIPLCPLCHRRLHHGCRADVDEMLTQL 356
Query 269 Y 269
Y
Sbjct 357 Y 357
> UniRef100_C8JWG9 Putative uncharacterized protein n=2 Tax=Listeria
monocytogenes RepID=C8JWG9_LISMO
Length=284
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query 206 ICENCGKNAPFY-LNDGNPYLEVHHVIPLS-----SGGADTTDNCVALCPNCHRELHYSK 259
ICE ++ F + DG PY+E HH+IP++ D DN + LCP CHR++HY+
Sbjct 187 ICEFNQEHKTFINIKDGKPYVEGHHLIPMAVQDYYDNTIDFADNIICLCPTCHRKIHYAV 246
Query 260 NAKELIEMLYVNINRLQK 277
+ E EML N +K
Sbjct 247 QS-EKKEMLIKIFNEREK 263
> UniRef100_C0ZFI2 Putative uncharacterized protein n=1 Tax=Brevibacillus
brevis NBRC 100599 RepID=C0ZFI2_BREBN
Length=360
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 8/61 (13%)
Query 224 YLEVHHVIP-----LSSGGADTTDNCVALCPNCHRELHYSKNA--KELIEMLYV-NINRL 275
++E HH+IP L S D N V+LCPNCHR++H++ + KELIE+LY INRL
Sbjct 283 FVEAHHLIPMKLQALFSWSLDVPGNIVSLCPNCHRKIHHASKSERKELIEVLYSKKINRL 342
Query 276 Q 276
+
Sbjct 343 K 343
> UniRef100_A3WFM1 5-methylcytosine-specific restriction enzyme
A n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFM1_9SPHN
Length=288
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 39/172 (22%)
Query 136 FWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEG----------------SRKP 179
FW RG+ L Q TD + + ++ K L+ +G + P
Sbjct 114 FWGVFERGDDIWLFQATD------VFMDRIRKHGLASEDGGSILEPEVDDYQSEINQKAP 167
Query 180 VEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFY-LNDGNPYLEVHHVIPLSSGG- 237
++ QK + RDP V A L+ + CE + F + G P++E HH+IP+ +
Sbjct 168 SQITSTQKAWSRDPKVAAEALKNASFECELYPELPTFTSRSTGYPFMEAHHLIPMKAQAD 227
Query 238 ----ADTTDNCVALCPNCHRELHYSKN-----------AKELIEMLYVNINR 274
D DN L P HR+LH ++ AK + YVNI +
Sbjct 228 FDVSLDVVDNICCLSPFAHRKLHMAEFDDIIDDLERLIAKRAALLDYVNITK 279
> UniRef100_Q81E47 5-methylcytosine-specific restriction enzyme
A n=5 Tax=Bacillus cereus group RepID=Q81E47_BACCR
Length=97
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query 182 VERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNP-YLEVHHVIPLS-----S 235
+E ++V+ RDP ++Q++ CE + F Y+E HH+IPL
Sbjct 1 MESGREVWPRDPKKAKQAIKQAEFKCEIDDTHETFVSEASRKNYMEAHHLIPLRMQHDFE 60
Query 236 GGADTTDNCVALCPNCHRELHY--SKNAKELIEMLY 269
D N V++CPNCHR +HY K+ K+++E+L+
Sbjct 61 NSLDVVGNIVSICPNCHRLIHYGRDKDKKKVLELLF 96
> UniRef100_Q723Z7 Conserved domain protein n=1 Tax=Listeria monocytogenes
serotype 4b str. F2365 RepID=Q723Z7_LISMF
Length=284
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query 206 ICENCGKNAPFY-LNDGNPYLEVHHVIPLS-----SGGADTTDNCVALCPNCHRELHYSK 259
+CE ++ F + DG PY+E HH+IP++ D DN + LCP CHR++HY+
Sbjct 187 VCEFNQEHKTFINIKDGKPYVEGHHLIPMAVQDYYDNTIDFADNIICLCPTCHRKIHYAV 246
Query 260 NAKELIEMLYVNINRLQK 277
+ E EML N +K
Sbjct 247 QS-EKKEMLIKIFNEREK 263
> UniRef100_F7K757 Putative uncharacterized protein n=1 Tax=Lachnospiraceae
bacterium 3_1_57FAA_CT1 RepID=F7K757_9FIRM
Length=300
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query 172 QPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNP-YLEVHHV 230
+P+ KPV +++++ +Y RD + L ++ CE + F + N Y E HH+
Sbjct 174 KPKDKGKPVVIDKIE-IYKRDRKISLNALAYARFECEIDRTHESFIRKNSNTNYTEPHHL 232
Query 231 IPLS-----SGGADTTDNCVALCPNCHRELHYSKNAKELIEMLY 269
+P++ S D +N V+LC NCH LHY ++ L++ LY
Sbjct 233 VPMAFQNNFSVSLDVEENIVSLCSNCHNLLHYGRDYLFLLKRLY 276
> UniRef100_C4L074 HNH endonuclease n=1 Tax=Exiguobacterium sp.
AT1b RepID=C4L074_EXISA
Length=272
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query 165 LIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPY 224
++K+ L + GS + R Q++ R V IL ++ CE CG +PF DG Y
Sbjct 158 IVKQNLQKVSGSSTAI---RKQQIRERSAAVYYSILARANNHCEACGSPSPFETEDG-AY 213
Query 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEML 268
LE+H + S A+CPNCH LH K+ + E L
Sbjct 214 LELHSLYSHSDQIILLPGLGAAVCPNCHMRLHKGKDRSQYNEQL 257
> UniRef100_E3Z496 Putative recombinase (Fragment) n=1 Tax=Listeria
innocua FSL J1-023 RepID=E3Z496_LISIN
Length=261
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query 206 ICENCGKNAPFY-LNDGNPYLEVHHVIPLS-----SGGADTTDNCVALCPNCHRELHYSK 259
ICE ++ F + DG PY+E HH+IP++ D DN + LCP CHR++HY+
Sbjct 187 ICEFNQEHKTFINIKDGKPYVEGHHLIPMAVQDYYDNTIDFADNIICLCPTCHRKIHYAV 246
Query 260 NAKELIEML 268
+ E EML
Sbjct 247 QS-EKKEML 254
> UniRef100_E4ML28 HNH endonuclease n=1 Tax=Eubacterium cellulosolvens
6 RepID=E4ML28_9FIRM
Length=231
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query 172 QPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHV 230
+ EG +K V R Y R P ++ ++ C CG + FY G Y+EVHHV
Sbjct 126 EKEGGKKVYYVTR----YERKPKLRKKAIEIHGTKCMACGFDFESFYGEQGKNYIEVHHV 181
Query 231 IPLSSGGADTTDN----CVALCPNCHRELHYSKNA 261
+PLS+ N + +C NCHR +H +NA
Sbjct 182 VPLSTVDEQVEVNPEKDMIVVCSNCHRMIHRRRNA 216
> UniRef100_F4CPM0 HNH endonuclease n=1 Tax=Pseudonocardia dioxanivorans
CB1190 RepID=F4CPM0_9PSEU
Length=442
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query 175 GSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLS 234
G+ +P++V R ++V + D + +A I + +G C CG+ + E+HHV+P
Sbjct 318 GAGQPLDVGRARRV-IPDGLRRA-IAARDRG-CARCGRP--------PSWCEIHHVVPWE 366
Query 235 SGGADTTDNCVALCPNCHRELHY 257
SGG + DNC LC CHR +H+
Sbjct 367 SGGPTSIDNCAMLCRACHRLVHH 389
> UniRef100_B5G9G0 HNH endonuclease n=1 Tax=Streptomyces sp. SPB74
RepID=B5G9G0_9ACTO
Length=335
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query 197 AWILQQSKGI-CENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTT--DNCVALCPNCH 252
A +L+Q + CE CG + FY G+ Y+E HHV+PL G TT + +C NCH
Sbjct 234 ASVLKQGGALSCEACGFDFGKFYGERGDGYIECHHVVPLHEAGEGTTRLADLALICSNCH 293
Query 253 RELHYSKNAKELIEMLYVNINR 274
R +H S E+ V ++R
Sbjct 294 RMIHRSAPWPTPAELRLVVLDR 315
> UniRef100_Q8PRX6 5-methylcytosine-specific restriction enzyme
A n=1 Tax=Methanosarcina mazei Go1 RepID=Q8PRX6_METMA
Length=257
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query 182 VERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADT 240
+ R Y R+P+ + ++ +C+ CG + Y G Y+EVHH+ PL GG
Sbjct 157 IMRYTTQYERNPINRRNAIRIHGTVCQGCGFDFEKVYGEIGKDYIEVHHIKPLYEGGGSV 216
Query 241 TDNC----VALCPNCHRELHYSKNA----KELIEMLYVNIN 273
N + +C NCHR +H K+ KEL ++L N N
Sbjct 217 PINAETDLICVCANCHRMIHRRKDKVLSLKELQKLLLANKN 257
> UniRef100_B8KVR3 HNH endonuclease domain protein n=1 Tax=gamma
proteobacterium NOR51-B RepID=B8KVR3_9GAMM
Length=289
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query 167 KKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICE-NCGKNAPFYLNDGNPYL 225
+K ++ PE + P E ++ Y R V L+ + CE + P G P +
Sbjct 158 QKLVAAPEDAVVPKEYRAMR--YERSAAVGREALESAGYACEFDNTHETPLSAVTGQPIM 215
Query 226 EVHHVIPLSSGGA-----DTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
EVHH++P+S D N V+LCPNCH +H S V + LQK
Sbjct 216 EVHHLVPISKSAEFRCSLDVLANVVSLCPNCHSAIHRSTKT--------VQVAMLQK 264
> UniRef100_A7Z277 Putative uncharacterized protein n=1 Tax=Bacillus
amyloliquefaciens FZB42 RepID=A7Z277_BACA2
Length=388
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query 162 VSKLIKKT--LSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN 219
+S+ +KKT ++Q + +P+ + QK + R+ + + + S CE + F
Sbjct 241 ISESVKKTYEVNQKKVRPEPIYNKGGQKQWTRNASLASMAMMLSNYTCEIEDSHKTFISK 300
Query 220 DGN-PYLEVHHVIPLSSGGA-----DTTDNCVALCPNCHRELHYSKN 260
N P++E HH++P+S G D +N V+LCP CHR +H ++
Sbjct 301 STNKPFVECHHLVPISKQGEFQYDLDQLENMVSLCPLCHRLIHLGRD 347
> UniRef100_B3CDE4 Putative uncharacterized protein n=1 Tax=Bacteroides
intestinalis DSM 17393 RepID=B3CDE4_9BACE
Length=261
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EGS + V R Y R+P+ + +++ IC+ CG + + Y GN ++ VHH++P
Sbjct 162 EGSLQQALVNR----YERNPIARKKCIEKHGCICQVCGMDFSKVYGELGNGFIHVHHIVP 217
Query 233 LSS--GGA---DTTDNCVALCPNCHRELHYSK 259
+S+ G A + + V +CPNCH LH K
Sbjct 218 ISALKGEAHKIEPENGLVPVCPNCHAMLHKGK 249
> UniRef100_B1ZSH9 Restriction endonuclease-like protein n=1 Tax=Opitutus
terrae PB90-1 RepID=B1ZSH9_OPITP
Length=261
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query 165 LIKKTLSQPEGSRKP----VEVERLQKVYVRDPMVKAWILQQSKGICENCG-KNAPFYLN 219
L++ +PEG +P V ++RL+ DP + ++ +C+ CG + Y
Sbjct 139 LVRGDFEEPEGFFRPGVATVVIDRLEH----DPFARRACIEHYGSVCQACGMRFDKVYGK 194
Query 220 DGNPYLEVHHVIPLSS--GGADTTDNCVALCPNCHRELHYSKNAKELIEM 267
G ++EVH + P+S AD + LC NCHR +H A + E+
Sbjct 195 IGAGFIEVHRLRPVSRPVDSADPVKELIPLCSNCHRMIHRRSPALSVAEL 244
> UniRef100_D6JZY9 HNH endonuclease domain-containing protein n=1
Tax=Streptomyces sp. e14 RepID=D6JZY9_9ACTO
Length=261
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query 190 VRDPMVKAWILQQSKGICENCG---KNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVA 246
VR+P + ++ +S G CEN P+ G P LEV H+ + GG D +A
Sbjct 164 VRNPAARRAVVIRSGGRCENPECLLPELPYRTKAGEPLLEVDHIDDHAGGGRDHPAAMIA 223
Query 247 LCPNCHRELHYSKNAKELIEML 268
LCPNCH + L E L
Sbjct 224 LCPNCHSNKTHGAERAALTERL 245
> UniRef100_C9XQW3 Putative uncharacterized protein n=2 Tax=Clostridium
difficile RepID=C9XQW3_CLODC
Length=375
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 13/130 (10%)
Query 136 FWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMV 195
F A I L E+SQ ++ LN+ + +T + EG K V K Y R+P
Sbjct 238 FTAEIEDDVLEEISQ----DNPLNINTINIELETEIRKEGKVKYV----YGKQYERNPRN 289
Query 196 KAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTTDN----CVALCPN 250
+ ++ C CG + Y + G Y+E+HH+ PLSS G ++ N V +C N
Sbjct 290 RIEAIKYHGTKCIVCGFDFEKTYGDRGKGYIEIHHIKPLSSVGEESNINPKTDLVPICSN 349
Query 251 CHRELHYSKN 260
CHR +H K+
Sbjct 350 CHRMIHRKKD 359
> UniRef100_B0ACA5 Putative uncharacterized protein n=1 Tax=Clostridium
bartlettii DSM 16795 RepID=B0ACA5_9CLOT
Length=305
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query 187 KVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNP-YLEVHHVIPLSSG-----GADT 240
K Y+RD V L+++ CE ++ F + Y E HH++P++ D
Sbjct 193 KTYIRDRKVAMNALKKANHKCEVDSEHEVFLRRNVEVGYTESHHLVPMAYSDIFDVSLDV 252
Query 241 TDNCVALCPNCHRELHYSKNAKELIEMLYVN-INRLQK 277
+N V+LC +CH LHY K + ++E LY +N L K
Sbjct 253 EENIVSLCSHCHNLLHYGKEFERVLEQLYYERVNHLNK 290
> UniRef100_G1VR34 Putative uncharacterized protein n=1 Tax=Erysipelotrichaceae
bacterium 2_2_44A RepID=G1VR34_9FIRM
Length=324
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query 170 LSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDG-NPYLEVH 228
+++ +KP E + K DP KA L+ CE + F G + Y+E H
Sbjct 190 IAEQRKHKKPFENTTIHKRVTTDPHFKATCLENHNYQCEISNDHETFSNTTGLHQYMECH 249
Query 229 HVIPLSSGG------ADTTDNCVALCPNCHRELHY-SKNAKELI 265
H+IP+ + D N + LCP CH ++HY +++KE +
Sbjct 250 HLIPMKAQKDFPNLWLDDMFNLICLCPLCHAQIHYGDRSSKEAV 293
> UniRef100_Q39IU3 Putative uncharacterized protein n=1 Tax=Burkholderia
sp. 383 RepID=Q39IU3_BURS3
Length=122
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 0/53 (0%)
Query 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNC 251
+L +++ CE CG A + DG P+L+ HH+ L+ +DT N ++CPNC
Sbjct 23 LLDRAETTCEACGHPATYSGADGFPFLDTHHLRKLTDSESDTVTNAFSVCPNC 75
> UniRef100_C3GU40 HNH endonuclease n=3 Tax=Bacillus thuringiensis
RepID=C3GU40_BACTU
Length=622
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 15/81 (18%)
Query 176 SRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSS 235
+RKPV DP++K L + C CG +L+ + HH++P+ +
Sbjct 466 NRKPV-----------DPIIKQQTLARDDYRCRCCGTGGKAFLS----TIIFHHIVPVHA 510
Query 236 GGADTTDNCVALCPNCHRELH 256
GG DT N + LC +CH LH
Sbjct 511 GGPDTVANGLTLCDSCHITLH 531
> UniRef100_D6K1C6 Putative uncharacterized protein n=1 Tax=Streptomyces
sp. e14 RepID=D6K1C6_9ACTO
Length=442
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query 199 ILQQSKGICEN--CGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+L +S+G CEN C + +P LEV HV+ L+ GG D VALCPNCH
Sbjct 328 VLGRSEGRCENPRCTGQPADVTDRRHPILEVDHVVELADGGRDHPSQMVALCPNCH 383
> UniRef100_F7NR59 Putative restriction endonuclease n=1 Tax=Rheinheimera
sp. A13L RepID=F7NR59_9GAMM
Length=272
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 23/124 (18%)
Query 142 RGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQ 201
R +LS L+ TDD S ++ + + V+V ++ D M A
Sbjct 128 RFQLSALTDDTDDNSYQDL-----------INQNRQATVDVYNRKRRVALDAMAHA---- 172
Query 202 QSKGICENCGKNAPFYLN-DGNPYLEVHHVIPLSSGGA-----DTTDNCVALCPNCHREL 255
+ CE + F G YLE HH+IP+S G D +N V LCP CHR L
Sbjct 173 --RYRCEATSSHRLFVSKATGKNYLEAHHIIPVSLGSQFNVQLDVIENVVCLCPFCHRAL 230
Query 256 HYSK 259
H+++
Sbjct 231 HHAE 234
> UniRef100_E0ID72 HNH endonuclease n=1 Tax=Paenibacillus curdlanolyticus
YK9 RepID=E0ID72_9BACL
Length=295
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query 165 LIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKG-ICENCGKNAPFYLNDGNP 223
L+ K L++ S P + +RL +V L++ G C+ CG + F +G
Sbjct 158 LVLKLLNEKYRSFSPEKKDRLISTHVDRGTSVTNALKEVLGPQCQICG-HIGFNKKNGGR 216
Query 224 YLEVHHVIPLSSGGADT--TDNCVALCPNCHRELHY 257
Y+E HH++ ++ D+ +DN + +CPNCHRE+H+
Sbjct 217 YIEAHHLVQIALKKEDSLCSDNVILVCPNCHREIHH 252
> UniRef100_D3MR19 Hnh n=1 Tax=Peptostreptococcus anaerobius 653-L
RepID=D3MR19_9FIRM
Length=252
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query 179 PVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPF-YLNDGNPYLEVHHVIPLSSG- 236
P+ ER Q +Y R L++++ +CE + F N Y E HH+IPLS+
Sbjct 132 PLIAERSQYIYPRKQYESKNALKRAQYLCEVDKMHFVFKRRNSPTNYTEPHHLIPLSAHR 191
Query 237 -----GADTTDNCVALCPNCHRELHYSKNAKELIEMLY 269
D N V+LC NCH LHY K+++ LY
Sbjct 192 DFPGIDLDREQNIVSLCSNCHNLLHYGLEYKDVLYDLY 229
> UniRef100_F6DMK5 HNH endonuclease n=1 Tax=Desulfotomaculum ruminis
DSM 2154 RepID=F6DMK5_DESRL
Length=117
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 15/74 (20%)
Query 189 YVRDPMVK-----AWILQQSKGI-----CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGA 238
Y RDP+VK W + + I CE C K P EVHHV+PLS GG
Sbjct 37 YQRDPIVKKRYNRTWKRIRDRYINEHPLCERCQKEGKL-----TPAEEVHHVVPLSRGGT 91
Query 239 DTTDNCVALCPNCH 252
DN +ALC +CH
Sbjct 92 HAADNLMALCTSCH 105
> UniRef100_Q6MJA3 Putative membrane protein n=1 Tax=Bdellovibrio
bacteriovorus RepID=Q6MJA3_BDEBA
Length=140
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query 176 SRKPVEVERLQKVYVRDPMVKAWILQQ-SKGICENCGKNAPFYLNDGNPYLEVHHVIPLS 234
S P E ++ +K R+ W Q+ KG+C +CGK F D L + H+IP++
Sbjct 34 SAAPPEHQKREKAKARELRQSQWWKQELGKGLCYHCGKR--FKPAD----LTMDHLIPIA 87
Query 235 SGGADTTDNCVALCPNCHRELHYSKNAKELIEML 268
GG +NCV C +C+ + Y A+ +E L
Sbjct 88 RGGKSNKNNCVPSCKDCNSKKGYKTRAEMALEEL 121
> UniRef100_G2SM89 Putative uncharacterized protein n=1 Tax=Lactobacillus
ruminis ATCC 27782 RepID=G2SM89_9LACO
Length=265
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query 135 SFWASIIRGELSELSQ-PTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDP 193
+F+++ I G L L Q + + S+ K L + +KPV+ LQ Y R+P
Sbjct 100 NFYSATINGYLDYLDQLKVVNADEIKENPSERYKIKLLKKPTRKKPVQTSILQ--YPRNP 157
Query 194 MVKAWILQQSKGICENCGKNAPFYL-NDGNPYLEVHHVIPLSSG-----GADTTDNCVAL 247
+S C + F N+ ++E HH+IP+ D DN + L
Sbjct 158 HEMLAAKHRSGWKCCYDSSHKTFISENEHKNFVEGHHLIPMQHQCDFEYTIDFADNIIPL 217
Query 248 CPNCHRELHYS--KNAKELIEMLYV 270
CPNCHR +H++ ++ ++E Y
Sbjct 218 CPNCHRRIHFAIKQDRNRMLEKFYF 242
> UniRef100_D7E996 HNH endonuclease n=1 Tax=Methanohalobium evestigatum
Z-7303 RepID=D7E996_METEZ
Length=401
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
++ ++L + C+ C + +P LE HH++ S+GG D DN + LC CH +
Sbjct 184 IRTYVLHRDNYTCQKCKNRSK------DPKLECHHIVFRSNGGTDRPDNLITLCETCHGK 237
Query 255 LH 256
LH
Sbjct 238 LH 239
> UniRef100_B3EB35 HNH endonuclease n=1 Tax=Geobacter lovleyi SZ
RepID=B3EB35_GEOLS
Length=281
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVI 231
PEG+ V V + Y R P+ +A + +C CG + Y G Y+EVHH I
Sbjct 177 PEGACIKVIVNK----YERSPVNRAVCIAVYGTVCHVCGFDFGKVYGQIGKGYIEVHHRI 232
Query 232 PLSSGGA----DTTDNCVALCPNCHRELHYSKNAKEL 264
P+S GA D + V LC NCH +H + EL
Sbjct 233 PVSKMGASYVIDPIRDLVPLCSNCHSAVHRTDPPVEL 269
> UniRef100_G4KTL8 Putative uncharacterized protein n=1 Tax=Oscillibacter
valericigenes Sjm18-20 RepID=G4KTL8_9FIRM
Length=233
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query 178 KPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYL-NDGNPYLEVHHVIPLS-- 234
KP + + R+ +V A ++ + CE+ ++ F + G Y+E HH+IPL
Sbjct 109 KPEIITDTAAQWKRNQIVIAHSIEGANYCCEHNVSHSTFIARSSGKAYMEGHHLIPLKYQ 168
Query 235 ---SGGADTTDNCVALCPNCHRELHYSKNAKE--LIEMLY 269
+ G D N V LCP CHR +H+ ++++ + EML+
Sbjct 169 TKFNCGIDVYANVVCLCPVCHRLMHFGRDSERRYVAEMLF 208
> UniRef100_F3ZWE2 HNH endonuclease n=1 Tax=Mahella australiensis
50-1 BON RepID=F3ZWE2_MAHA5
Length=497
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
++ +I+ + +G C CGK +L HH++P S GG+DT N LC CH +
Sbjct 219 MREYIIAKQEGKCLLCGKRKIEHL---------HHIVPRSKGGSDTYKNIAGLCGKCHEK 269
Query 255 LHYSKNAK 262
+H AK
Sbjct 270 VHKDPKAK 277
> UniRef100_F0HET7 Putative uncharacterized protein n=1 Tax=Turicibacter
sp. HGF1 RepID=F0HET7_9FIRM
Length=316
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query 185 LQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSS--GGADTTD 242
L ++Y RD + + Q+ K +C+ CGK ++++ Y E HH+ PL G D +
Sbjct 195 LTRIY-RDTKIVRALKQEYKDVCQICGKT--IFISENKNYSEGHHIKPLGGIHCGPDIKE 251
Query 243 NCVALCPNCHRELHY 257
N + LCPN H E Y
Sbjct 252 NIIVLCPNHHTEFDY 266
> UniRef100_C0QGN0 Putative 5-methylcytosine-specific restriction
enzyme A n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QGN0_DESAH
Length=375
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EG+++ V + + Y RD + ++ C+ CG + Y G Y+ VHH+IP
Sbjct 275 EGAKQTVTINK----YERDHNARKACIEYHGYNCKVCGFDFEKTYGELGRNYIHVHHLIP 330
Query 233 LSSGGADTTDN----CVALCPNCHRELHYSKNAKELIEM 267
LS G + + N + +CPNCH LH S+N +L +
Sbjct 331 LSKIGKEYSINPQTDLIPVCPNCHAMLHKSENPNDLYSL 369
> UniRef100_C9R999 HNH endonuclease n=1 Tax=Ammonifex degensii
KC4 RepID=C9R999_AMMDK
Length=387
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query 205 GICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNA 261
G C CG L+ HH++P S GG DT +N V LC CHRELH + A
Sbjct 185 GACVLCGSTR---------RLQRHHLVPRSKGGTDTPENQVLLCAECHRELHAGEAA 232
> UniRef100_A6TVA6 HNH endonuclease n=1 Tax=Alkaliphilus metalliredigens
QYMF RepID=A6TVA6_ALKMQ
Length=124
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query 164 KLIKKTLSQPEGSRKPVEVERLQKVY--VRDPMVKAWILQQSKGICENCGKNAPFYLNDG 221
K++ K +Q + R P +R + + +RD +KA L CE C +N +
Sbjct 29 KVVTKRYNQYQ--RDPASNKRYGRSWKRIRDRYIKAHPL------CEECDRNGRIKAAE- 79
Query 222 NPYLEVHHVIPLSSGGADTTDNCVALCPNCHREL 255
EVHH++PLS GG + T N +ALC +CH ++
Sbjct 80 ----EVHHILPLSKGGGNETSNLMALCKSCHSKI 109
> UniRef100_Q64YP3 Putative uncharacterized protein n=1 Tax=Bacteroides
fragilis RepID=Q64YP3_BACFR
Length=216
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PE +R ++ R + +R+ + + + +C+ CG + + Y EVHH+ P
Sbjct 96 PEEAR---QIRREIEAILRNQKLVDELKIRYNNVCQICG--TQIKIGENKYYSEVHHIWP 150
Query 233 LSS--GGADTTDNCVALCPNCHRELHYSKNA--KELIEMLYVNI 272
L G+DT DN V +CPNCH L Y KE+ ++L NI
Sbjct 151 LGKPHNGSDTLDNMVCVCPNCHTLLDYKAIHLNKEIFKVLKHNI 194
> UniRef100_Q2BBA0 Putative uncharacterized protein n=1 Tax=Bacillus
sp. NRRL B-14911 RepID=Q2BBA0_9BACI
Length=339
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query 171 SQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHH 229
S EG RK V V VY R+P+ + ++ C+ C N Y G ++ VHH
Sbjct 232 SLEEGKRKSVTV----NVYERNPIARKLCIEHYGLQCQVCNLNFEDTYGGVGKDFIHVHH 287
Query 230 VIPLSSGGADTTDN----CVALCPNCHRELHYSKNAKELIEMLYVNINRLQ 276
+IPL D N + +CPNCH LH +N +Y+++ +L+
Sbjct 288 IIPLYEIQQDYEVNPILDLIPVCPNCHAMLHRKENG------IYLSVEQLK 332
> UniRef100_F9RCY3 Putative restriction endonuclease n=1 Tax=Vibrio
sp. N418 RepID=F9RCY3_9VIBR
Length=232
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query 168 KTLSQPEGSRKPVEVERLQKVYVRDPMV---KAWILQQSK----GICENCGKNAPFYLND 220
K LS E +R+ + +R V + W+ + +K GIC+ C APF
Sbjct 123 KKLSDAELARRAYQSKRKTSVTKSTATIYERNVWVTEHAKRLANGICQLCITPAPFSTPK 182
Query 221 GNPYLEVHHVIPLSSGGADT 240
G PYLE HH+ LS GG DT
Sbjct 183 GVPYLETHHIHWLSRGGDDT 202
> UniRef100_D3A277 5-methylcytosine-specific restriction enzyme
A n=1 Tax=Neisseria subflava NJ9703 RepID=D3A277_NEISU
Length=255
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EGS + V V R Y RDP + L++ C C N FY G ++ VHH+ P
Sbjct 150 EGSVQQVMVNR----YERDPKAREACLKKYGYNCSVCNFNFEDFYGEIGKNFIHVHHLTP 205
Query 233 LSSGGADTTD---NCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
+S+ G T+ + +CPNCH LH + N + IE L + I ++QK
Sbjct 206 VSNNGERYTNPEKDLRPVCPNCHAMLHKT-NRPQRIEDLKLLI-KMQK 251
> UniRef100_G0W2G9 Putative HTH-type transcriptional regulatory
protein n=1 Tax=Paenibacillus polymyxa M1 RepID=G0W2G9_PAEPO
Length=153
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query 190 VRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCP 249
+ + + A + +++ GICE C APF ++G PYLE + + + + ++ A+CP
Sbjct 73 IENSYIAAEVFERASGICELCNTMAPFIRSNGQPYLETY----ILKDHSISAEHVAAVCP 128
Query 250 NCHREL 255
NC ++L
Sbjct 129 NCLKKL 134
> UniRef100_Q3IBU7 Putative HNH endonuclease n=1 Tax=Pseudoalteromonas
haloplanktis TAC125 RepID=Q3IBU7_PSEHT
Length=420
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VKA++LQ+ C++ K N L VHH + S GG D N +ALC CH +
Sbjct 184 VKAYVLQRDNYKCQSGRKT------KHNAKLHVHHKVFRSQGGTDALSNLIALCETCHND 237
Query 255 LHYSK 259
LH K
Sbjct 238 LHVGK 242
> UniRef100_Q4BZL5 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4BZL5_CROWT
Length=276
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKA 197
G+ + + T + L + +++ + TL +PE S P + + + Y P A
Sbjct 155 GKQGKWTFQTREYVLYHHTETEIKRHTLVKPESS--PYDGNWTYWSKRRGTYTGTPARVA 212
Query 198 WILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+L++ KGIC C ++ F D +EV H+IP S GG DT +N AL +CH
Sbjct 213 KLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 262
> UniRef100_E2SS26 Product McrA n=1 Tax=Erysipelotrichaceae bacterium
3_1_53 RepID=E2SS26_9FIRM
Length=287
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query 170 LSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDG-NPYLEVH 228
+++ +KP E + DP KA L+ CE + F G + Y+E H
Sbjct 153 IAEQRKHKKPCENTTVHNRVATDPHFKATCLENHNYQCEISKDHETFSNTTGLHQYMECH 212
Query 229 HVIPLSSGG------ADTTDNCVALCPNCHRELHY-SKNAKELI 265
H+IP+ + D N V LCP CH ++HY +++KE +
Sbjct 213 HLIPMKAQKDFPDLWLDDLFNLVCLCPLCHAQIHYGDRSSKEAV 256
> UniRef100_Q65MN2 McrA n=1 Tax=Bacillus licheniformis ATCC 14580
RepID=Q65MN2_BACLD
Length=140
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query 170 LSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN-PYLEVH 228
+SQ +P+ + Q+ + R+ + + + S CE + F N PY+E H
Sbjct 5 VSQKRKRPQPIINQGGQRHWTRNASLASKAMMLSNYTCEIDHTHRTFISKSTNMPYVECH 64
Query 229 HVIPLSSGGA-----DTTDNCVALCPNCHRELHYSKN--AKELIEMLY 269
H++P++ D N V+LCP+CHR +HY ++ +++++ LY
Sbjct 65 HLVPIAKQEGFKYDLDQLANLVSLCPHCHRLIHYGQDEEKEKMLKKLY 112
> UniRef100_E0NJY1 HNH endonuclease domain protein n=1 Tax=Peptoniphilus
duerdenii ATCC BAA-1640 RepID=E0NJY1_9FIRM
Length=122
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query 181 EVERLQKVYVRDPMV-----KAWILQQSK-----GICENCGKNAPFYLNDGNPYLEVHHV 230
E R + Y RDP KAW + + + +CE C K N EVHH+
Sbjct 29 EYNRNYEKYKRDPKTHKRYGKAWRVIRKRYVAEHPLCEMCLKE-----NKMTKVEEVHHI 83
Query 231 IPLSSGGADTTDNCVALCPNCHRELH 256
+PLS GG + DN ++LC +CH ++H
Sbjct 84 LPLSRGGTNDEDNLMSLCKSCHSKIH 109
> UniRef100_D7E737 HNH endonuclease n=1 Tax=Methanohalobium evestigatum
Z-7303 RepID=D7E737_METEZ
Length=407
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
++ ++L + C+ C + +P LE HH++ S GG + DN + LC CH +
Sbjct 184 IRTYVLHRDNYTCQKCKNRSK------DPKLECHHIVFRSKGGTNRPDNLITLCETCHGK 237
Query 255 LHYSK 259
LH K
Sbjct 238 LHNGK 242
> UniRef100_G4KZY6 Putative uncharacterized protein n=1 Tax=Oscillibacter
valericigenes Sjm18-20 RepID=G4KZY6_9FIRM
Length=150
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query 164 KLIKKTLSQPEGSRKPVEVERLQKVY--VRDPMVKAWILQQSKGICENCGKNAPFYLNDG 221
K++ K +Q E R P +R + + VRD +KA L CE C K
Sbjct 58 KVMDKRYNQYE--RDPASNKRYGRSWKRVRDRYIKAHPL------CEECKKQGKL----- 104
Query 222 NPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P EVHH++PLS GG +N +ALC CH
Sbjct 105 TPAEEVHHILPLSKGGGSNAENLMALCKACH 135
> UniRef100_D7E9Q6 HNH endonuclease n=1 Tax=Methanohalobium evestigatum
Z-7303 RepID=D7E9Q6_METEZ
Length=407
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
++ ++L + C+ C + +P LE HH+I S GG D +N + LC CH +
Sbjct 184 IRIYVLHRDDYTCQKCKNKSK------DPKLECHHIIFRSKGGTDRPNNLITLCETCHSK 237
Query 255 LH 256
LH
Sbjct 238 LH 239
> UniRef100_Q4CA22 RNA-directed DNA polymerase (Reverse transcriptase):HNH
endonuclease n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4CA22_CROWT
Length=584
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKA 197
G+ + + T + L + +++ + TL +PE S P + + + Y P A
Sbjct 463 GKQGKWTFQTREYVLYHHTETEIKRHTLVKPESS--PYDGNWTYWSKRRGTYTGTPARVA 520
Query 198 WILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+L++ KGIC C ++ F D +EV H+IP S GG DT +N AL +CH
Sbjct 521 KLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 570
> UniRef100_F3QLA4 HNH endonuclease domain protein n=1 Tax=Parasutterella
excrementihominis YIT 11859 RepID=F3QLA4_9BURK
Length=291
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVI 231
PEG + R Y R P ++A +L + C CG + Y G ++EVHH+I
Sbjct 186 PEGKPRTFFTYR----YERSPKLRAAVLNKFGYKCAVCGFDFEKIYGQLGKNFIEVHHMI 241
Query 232 PLSSGGADT-TDNCVALCPNCHRELH--YSKNAKE----LIEMLYVNINR 274
P+S + +N LC NCHR +H YS E I++L + IN+
Sbjct 242 PVSEKERENDVNNLRPLCSNCHRMIHRLYSSLEPEEYAGAIDLLKLTINK 291
> UniRef100_E2Z107 HNH endonuclease domain protein n=1 Tax=Enterococcus
faecalis TX0470 RepID=E2Z107_ENTFA
Length=153
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 27/111 (24%)
Query 144 ELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQS 203
++ +L + D+E+ N++ ++ + ++K ++ Q+V+ RD
Sbjct 53 DIEQLQKEFDNETFFNIKFKRMYQ------TNAKKWKKIS--QEVFERDAYT-------- 96
Query 204 KGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
C+ CGK LEV HVIP S GG+D DN V C C+R+
Sbjct 97 ---CKYCGKIGGI--------LEVDHVIPFSKGGSDELDNLVCACRKCNRQ 136
> UniRef100_E7QUJ5 HNH endonuclease domain protein n=1 Tax=Haladaptatus
paucihalophilus DX253 RepID=E7QUJ5_9EURY
Length=234
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PEG+ P V R + R+ V + ++ C+ CG +G Y E HH+ P
Sbjct 103 PEGTDDPERVRRTVETVTRNRKVVERLKERYDYECQLCGTRRRRSRTEG--YAEAHHIEP 160
Query 233 LSSG--GADTTDNCVALCPNCHRELHY 257
L G D +N + +CPN HR+L Y
Sbjct 161 LGGPHFGPDMPENLLVVCPNHHRDLDY 187
> UniRef100_Q4BXV9 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4BXV9_CROWT
Length=183
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKA 197
G+ + + T + L + +++ + TL +PE S P + + + Y P A
Sbjct 62 GKQGKWTFQTREYVLYHHTETEIKRHTLVKPESS--PYDGNWTYWSKRRGTYTGTPARVA 119
Query 198 WILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+L++ KGIC C ++ F D +EV H+IP S GG DT +N AL +CH
Sbjct 120 KLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 169
> UniRef100_E9SPY9 HNH endonuclease n=1 Tax=Clostridium symbiosum
WAL-14673 RepID=E9SPY9_CLOSY
Length=119
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVK-----AW-----ILQQSKGICENCGKNAPFYLNDGN 222
PE +K E +R +K Y RDP K AW + +CE C +N +
Sbjct 24 PEHEKK--EAKRYEK-YDRDPNAKRRYGRAWKRIRDSYAAAHPLCERCLENGVY-----T 75
Query 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
P ++HHV PLS GG +N +ALC +CH ++H
Sbjct 76 PTEQIHHVKPLSQGGTHDRENLMALCKSCHAKIH 109
> UniRef100_D9VYU5 HNH endonuclease n=1 Tax=Streptomyces sp. C
RepID=D9VYU5_9ACTO
Length=274
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query 207 CENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTT--DNCVALCPNCHRELHYS 258
CE CG + A Y G Y+E HHV+PL G TT + +C NCHR +H S
Sbjct 182 CEACGFDFALVYGERGEGYIECHHVVPLHEAGEGTTKLSDLALICSNCHRMIHRS 236
> UniRef100_C9RCK4 HNH endonuclease n=1 Tax=Ammonifex degensii
KC4 RepID=C9RCK4_AMMDK
Length=234
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 0/32 (0%)
Query 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
L+VHH++P S GG DT N V LC CHR+LH
Sbjct 196 LQVHHLVPRSKGGTDTPANLVVLCRECHRKLH 227
> UniRef100_C8U495 Endonuclease-like protein n=2 Tax=Escherichia
coli RepID=C8U495_ECO10
Length=246
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query 181 EVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLSS---- 235
++ERL Y RDP + + C CG N Y + G Y++VHH+ PL
Sbjct 144 QLERLATYYERDPKARQACIDAHGYTCHICGFNFEKVYGSIGKNYIQVHHIKPLHHIAKY 203
Query 236 GGADTTDNCVALCPNCHRELH 256
D ++ + LC NCH +H
Sbjct 204 HKVDPVNDLIPLCANCHVMIH 224
> UniRef100_E9YS35 HNH endonuclease n=1 Tax=Escherichia coli M863
RepID=E9YS35_ECOLX
Length=246
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query 181 EVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLSS---- 235
++ERL Y RDP + + C CG N Y + G Y++VHH+ PL
Sbjct 144 QLERLATYYERDPKARQACIDAHGYTCHICGFNFEKVYGSIGKNYIQVHHIKPLHHIAKY 203
Query 236 GGADTTDNCVALCPNCHRELH 256
D ++ + LC NCH +H
Sbjct 204 HKVDPVNDLIPLCANCHVMIH 224
> UniRef100_E5VYM8 HNH endonuclease n=1 Tax=Anaerostipes sp. 3_2_56FAA
RepID=E5VYM8_9FIRM
Length=213
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 0/30 (0%)
Query 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P++EVHH+IP S GG DT +N LC CH
Sbjct 25 PFVEVHHIIPQSEGGEDTIENAAPLCSRCH 54
> UniRef100_E4LR58 HNH endonuclease domain protein n=1 Tax=Clostridium
sp. HGF2 RepID=E4LR58_9CLOT
Length=119
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVK-----AW-----ILQQSKGICENCGKNAPFYLNDGN 222
PE +K E +R +K Y RDP K AW + +CE C +N +
Sbjct 24 PEHEKK--EAKRYEK-YDRDPATKRRYGRAWKRIRDSYAAAHPLCEMCLENGVY-----T 75
Query 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
P ++HHV PLS GG +N +ALC +CH ++H
Sbjct 76 PTEQIHHVKPLSQGGTHDRENLMALCKSCHAKIH 109
> UniRef100_D2U9D5 Putative phage-related protein n=1 Tax=Xanthomonas
albilineans GPE PC73 RepID=D2U9D5_XANAP
Length=121
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
++A+++Q+ +G+C+ C ++ P + V H++P S GG D +NC A+C CH
Sbjct 54 LRAFVMQRDQGLCQPCKQSGRL-----TPAVAVDHIVPKSQGGTDHPNNCQAICHRCH 106
> UniRef100_E5W5Z5 Putative uncharacterized protein n=1 Tax=Bacillus
sp. BT1B_CT2 RepID=E5W5Z5_9BACI
Length=371
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query 170 LSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN-PYLEVH 228
++Q +P+ + Q+ + R+ + + + S CE + F N PY+E H
Sbjct 236 INQKRERPQPIINQGGQRQWTRNASLASKAMMLSNYTCEIDHSHQTFISKSTNKPYVECH 295
Query 229 HVIPLSSG-----GADTTDNCVALCPNCHRELHYSKN 260
H++P++ D N V+LCP+CHR +HY ++
Sbjct 296 HLVPIAKQEKFKYDLDQLANLVSLCPHCHRLIHYGQD 332
> UniRef100_C7V3C1 Predicted protein n=1 Tax=Enterococcus faecalis
T11 RepID=C7V3C1_ENTFA
Length=288
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query 224 YLEVHHVIPLSS-----GGADTTDNCVALCPNCHRELHYSKNAKEL 264
Y+E HH+IPLS+ D T N LCP CHR +HY K +L
Sbjct 212 YMETHHIIPLSAQRYYKNKLDCTANLSCLCPTCHRSIHYGKKEDKL 257
> UniRef100_E6W4M4 HNH endonuclease n=1 Tax=Desulfurispirillum
indicum S5 RepID=E6W4M4_DESIS
Length=251
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EG+ K + V Y R+ +A ++ C C + A FY + G Y+ VHHV+P
Sbjct 145 EGASKVIAV----NTYERNAEARAKCIKHHGYECAVCKFDFAAFYGSIGEKYIHVHHVVP 200
Query 233 LSSGGADTTDN----CVALCPNCHRELHYSKNA 261
LS G + N V +CPNCH +H ++ A
Sbjct 201 LSEIGREYILNPIKDLVPICPNCHAIIHRTRPA 233
> UniRef100_G4NUB4 McrA n=1 Tax=Bacillus subtilis subsp. spizizenii
TU-B-10 RepID=G4NUB4_BACPN
Length=386
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query 162 VSKLIKKT--LSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN 219
+S+ +K T ++Q + +P+ + QK + R+ + + + S CE + F
Sbjct 241 ISESVKNTYKVNQKKERPEPIYYKGGQKQWTRNASLASMAMMLSNYTCEIDDSHKTFISK 300
Query 220 DGN-PYLEVHHVIPLSSGGA-----DTTDNCVALCPNCHRELHYSKN 260
N P++E HH++P++ D +N V+LCP CHR +H ++
Sbjct 301 STNKPFVECHHLVPIAKQDEFQYDLDQLENLVSLCPLCHRLIHLGRD 347
> UniRef100_F0ESM3 Putative uncharacterized protein mcrA n=1 Tax=Haemophilus
parainfluenzae ATCC 33392 RepID=F0ESM3_HAEPA
Length=212
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query 185 LQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN--DGNPYLEVHHVIPLSSG-----G 237
+ Y RD V L +++ +CE + F D Y E HH+IPLS
Sbjct 95 ISSAYKRDINVARNALIRARFLCEYDESDRVFLRKGCDEIYYTEAHHLIPLSEHNDFEYS 154
Query 238 ADTTDNCVALCPNCHRELHYSK--NAKELIEMLY 269
D +N V+LC +CH LHY + + KE+++ LY
Sbjct 155 LDIEENVVSLCSHCHNLLHYGRYEDKKEILQKLY 188
> UniRef100_Q8DMK2 Maturase; reverse transcriptase n=1 Tax=Thermosynechococcus
elongatus BP-1 RepID=Q8DMK2_THEEB
Length=562
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PE + E ++L++ + ++ + ++ GIC CG + + E+HH++P
Sbjct 469 PEWAEYFEERKKLKEAPAQYRRIRRELWKKQGGICPVCGGEI-----EQDMLTEIHHILP 523
Query 233 LSSGGADTTDNCVALCPNCHRELH 256
GG+D DN V + NCH+++H
Sbjct 524 KHKGGSDDLDNLVLIHANCHKQVH 547
> UniRef100_D6S6T6 HNH endonuclease domain protein n=1 Tax=Finegoldia
magna ATCC 53516 RepID=D6S6T6_PEPMA
Length=132
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query 181 EVERLQKVYVRDPMV-----KAWILQQSK-----GICENCGKNAPFYLNDGNPYLEVHHV 230
E R + Y RDP K W + + + +CE C K N EVHH+
Sbjct 43 EYNRNYEKYKRDPKTHKRYGKTWRIIRKRYVAEHPLCEMCLKE-----NRMTKVEEVHHI 97
Query 231 IPLSSGGADTTDNCVALCPNCHRELH 256
+PLS GG + DN ++LC +CH ++H
Sbjct 98 LPLSRGGTNNEDNLMSLCKSCHSKIH 123
> UniRef100_F0GWG0 HNH endonuclease domain protein n=1 Tax=Anaerococcus
prevotii ACS-065-V-Col13 RepID=F0GWG0_9FIRM
Length=134
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 15/78 (19%)
Query 189 YVRDPMV-----KAWILQQSK-----GICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGA 238
Y RDP KAW + + + +CE C K N EVHH++PLS GG
Sbjct 51 YKRDPNTHKRYGKAWRIIRKRYVAEHPLCEMCLKE-----NRMTKVEEVHHILPLSRGGT 105
Query 239 DTTDNCVALCPNCHRELH 256
+ DN ++LC +CH ++H
Sbjct 106 NDEDNLMSLCKSCHSKIH 123
> UniRef100_Q5YRW6 Putative endonuclease n=1 Tax=Nocardia farcinica
IFM 10152 RepID=Q5YRW6_NOCFA
Length=123
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query 202 QSKGICENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTT--DNCVALCPNCHRELHYS 258
S+ CE CG + Y G Y+E HH++PL G T + V LC NCHR +H+
Sbjct 34 HSRVFCEVCGFDFEAVYGERGAGYIECHHIVPLHVSGETVTKLSDLVLLCSNCHRMIHHG 93
Query 259 K---NAKELIEMLYVN 271
+ +EL E++ V+
Sbjct 94 SRWLSPEELREVVQVS 109
> UniRef100_E8WU15 HNH endonuclease n=1 Tax=Geobacter sp. M18 RepID=E8WU15_GEOS8
Length=254
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query 187 KVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLSS----GGADTT 241
K Y R+P+ + ++ +C CG N Y G+ Y+EVHHV P+S+ D
Sbjct 160 KRYERNPVNRLEAIRYHGLVCNVCGFNFEEVYGERGSGYIEVHHVEPISTYDGEQPVDPK 219
Query 242 DNCVALCPNCHRELHYSKN 260
+ + +C NCHR +H + N
Sbjct 220 TDLITVCSNCHRMIHRNPN 238
> UniRef100_A0ZAT3 Putative uncharacterized protein n=1 Tax=Nodularia
spumigena CCY9414 RepID=A0ZAT3_NODSP
Length=394
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query 206 ICENCGKNAPFYLNDGNPYLEVHHVIPLSS-----GGADTTDNCVALCPNCHRELH 256
+C+ C N + LE+HH++PLSS G + ++ V LCPNCHR +H
Sbjct 305 VCDMCSCNTRHRYPWTDNLLEIHHLLPLSSAITVTGEGTSLEDVVGLCPNCHRSVH 360
> UniRef100_Q4C974 RNA-directed DNA polymerase n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4C974_CROWT
Length=594
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
+Y PM + +L++ KGIC C ++ F +D +EV H+IP S GG D DN AL
Sbjct 504 IYTGTPMRVSKLLKKQKGICPICKQH--FTPDD---LIEVDHIIPKSKGGKDRYDNLQAL 558
Query 248 CPNCH 252
+CH
Sbjct 559 HRHCH 563
> UniRef100_C9RBS6 HNH endonuclease n=1 Tax=Ammonifex degensii
KC4 RepID=C9RBS6_AMMDK
Length=388
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Query 205 GICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
G C CG L+ HH++P S GG DT +N V LC CHR+LH
Sbjct 185 GACVLCGSTR---------RLQRHHLVPRSKGGTDTPENQVLLCAECHRKLH 227
> UniRef100_D4GRV9 HNH endonuclease domain protein n=1 Tax=Haloferax
volcanii DS2 RepID=D4GRV9_HALVD
Length=498
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 57/137 (41%), Gaps = 23/137 (16%)
Query 132 YSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVE-------- 183
Y+ S++ I EL L Q DE +K ++T P PV+VE
Sbjct 321 YNPSYFEEIWSDEL--LLQENRDED------TKTRQRTDPFPREDFDPVQVEPELYEDIG 372
Query 184 RLQKVY---VRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSS--GGA 238
R Q V RD V + + C+ CG NDG Y EVHH++PL G
Sbjct 373 RYQTVLDRVRRDREVVNELKRLYDDKCQVCGTT--LLRNDGTRYSEVHHIVPLGEPHSGP 430
Query 239 DTTDNCVALCPNCHREL 255
D N + LCPN H +
Sbjct 431 DKRSNMLVLCPNHHTDF 447
> UniRef100_F6G566 Putative uncharacterized protein n=1 Tax=Ralstonia
solanacearum Po82 RepID=F6G566_RALS8
Length=233
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EG+ K V V + Y RDP ++ +Q K IC CG + Y G ++ VHH+
Sbjct 126 EGAAKQVVVNQ----YERDPKARSACIQHWKPICYVCGFDFHKTYGEMGRGFIHVHHLTD 181
Query 233 LSSGGAD-TTDNCVAL---CPNCHRELHYSKNAKEL 264
++S G + D C L CPNCH LH + A ++
Sbjct 182 IASIGKEYQVDPCKDLRPVCPNCHAMLHTQRPALDI 217
> UniRef100_F3S178 Putative uncharacterized protein n=1 Tax=Vibrio
parahaemolyticus 10329 RepID=F3S178_VIBPA
Length=258
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 22/158 (13%)
Query 104 QAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVS 163
+ YF+ GR+++ ++I I D W EL+ + D+E +
Sbjct 94 ETYFTFHGREDMDFAWHKQQIQIAC-----DCNWVD----ELNRRNIDIDNE----FSYA 140
Query 164 KLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGN 222
I + S EGS+K + V Y R + ++ C CG N FY
Sbjct 141 DEITEPTSVVEGSKKTITV----NAYERSTFARNECIRLKGDSCIVCGFNFGKFYGEKAE 196
Query 223 PYLEVHHVIPLSSGG----ADTTDNCVALCPNCHRELH 256
++ VHH++PL D ++ V +CPNCH LH
Sbjct 197 GFIHVHHLVPLHEINEEYEVDPEEHLVPVCPNCHAMLH 234
> UniRef100_Q4C8B3 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4C8B3_CROWT
Length=214
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEV-----ERLQKVYVRDPMVKA 197
G+ + + T L + +++ + TL +PE S P++ + + Y P +
Sbjct 76 GKHGKWTFQTGKTVLYHHAETEIKRHTLVKPESS--PLDGNWTYGRKRRGTYTGTPTRVS 133
Query 198 WILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHY 257
+L++ KGIC C ++ F D +EV H+IP S GG DT +N AL HR HY
Sbjct 134 KLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYNNLQAL----HRHCHY 184
Query 258 SKNAKELI 265
K+ + +
Sbjct 185 VKSKNDYL 192
> UniRef100_Q0HF94 Putative uncharacterized protein n=1 Tax=Shewanella
sp. MR-4 RepID=Q0HF94_SHESM
Length=295
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query 221 GNPYLEVHHVIPLSSG-----GADTTDNCVALCPNCHRELHYSKNAK--ELIEMLY-VNI 272
G ++E HH++P++ D N V LCPNCHR +HY+++ EL+ Y I
Sbjct 215 GKAFVEAHHLVPVAKSPDFDVSLDVEPNIVVLCPNCHRAIHYAESQYKIELLTRFYNQRI 274
Query 273 NRLQK 277
N L++
Sbjct 275 NELRQ 279
> UniRef100_D3LVI3 HNH endonuclease domain protein n=1 Tax=Megasphaera
genomosp. type_1 str. 28L RepID=D3LVI3_9FIRM
Length=90
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 13/77 (16%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH-- 252
VK ++++ G+C CG A ++VHHV S GG D NCV LC CH
Sbjct 9 VKRLVIKRDNGLCVLCGALA----------VDVHHVKFRSQGGKDDVRNCVCLCRKCHDM 58
Query 253 -RELHYSKNAKELIEML 268
LH +AKE+ ML
Sbjct 59 AHGLHKYISAKEVKAML 75
> UniRef100_A0YT41 Putative uncharacterized protein n=1 Tax=Lyngbya
sp. PCC 8106 RepID=A0YT41_LYNSP
Length=280
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P K ++L++ KG C CG + DG+ LE H+IP S GG D DN L +CH
Sbjct 202 PAEKVYLLKKQKGRCTYCG----LHFQDGD-LLETDHIIPKSKGGKDNRDNKQLLHRHCH 256
> UniRef100_Q538B5 MnlI restriction endonuclease n=2 Tax=Moraxella
nonliquefaciens RepID=Q538B5_MORNO
Length=386
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 31/55 (56%), Gaps = 9/55 (16%)
Query 224 YLEVHHVIPLSSGGA-DTTDNCVALCPNCHRELHYSKN------AKELIEMLYVN 271
YLEVHHVI +S D DN V +CP CHR L SKN KELI + +N
Sbjct 308 YLEVHHVISFASDRTLDQIDNLVKVCPTCHRAL--SKNRADEQYQKELISEILIN 360
> UniRef100_F3AKQ4 Putative uncharacterized protein n=1 Tax=Lachnospiraceae
bacterium 9_1_43BFAA RepID=F3AKQ4_9FIRM
Length=160
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query 186 QKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGN-PYLEVHHVIPLS-----SGGAD 239
+ ++ R +++ + + CE ++ F N PY+E HH +P+S S D
Sbjct 42 KTIWKRSGVLRTQAFELANYKCELNREHETFIAESTNKPYMEGHHALPMSLQDQFSVSLD 101
Query 240 TTDNCVALCPNCHRELHY--SKNAKELIEMLYV 270
N V LCP CHR++HY K +++ +YV
Sbjct 102 VYSNIVCLCPLCHRKIHYGMENEKKIMLDSIYV 134
> UniRef100_C7H8C7 Putative HNH endonuclease domain protein n=1
Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8C7_9FIRM
Length=367
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query 183 ERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
ER + P + ++ KGIC CGK+ F + + ++ H+ P S GG T +
Sbjct 298 ERHLNIRAFSPEMARAAYERQKGICPKCGKH--FEIEE----MQADHITPWSKGGKTTAE 351
Query 243 NCVALCPNCHR 253
NC LC +C+R
Sbjct 352 NCQMLCADCNR 362
> UniRef100_E0ID66 HNH endonuclease n=1 Tax=Paenibacillus curdlanolyticus
YK9 RepID=E0ID66_9BACL
Length=482
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query 167 KKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLE 226
K + +P G+ PV V+ VR + ++ C+ CG+ L G + E
Sbjct 270 KNLVVKPIGTLLPVRVKNTVSRVVRSSSLVRYLRDLYSDACQICGQRID--LGPGGTFSE 327
Query 227 VHHVIPLSSG-GADTTDNCVALCPNCH 252
VHH+ PL GAD +N + +CPN H
Sbjct 328 VHHIQPLGKHRGADVIENMIVVCPNHH 354
> UniRef100_F3ZZW1 HNH endonuclease n=1 Tax=Mahella australiensis
50-1 BON RepID=F3ZZW1_MAHA5
Length=125
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 16/85 (18%)
Query 181 EVERLQKVYVRDPMVK-----AWILQQSKGI-----CENCGKNAPFYLNDGNPYLEVHHV 230
E +R ++ Y RDP V+ W + + I CE C K P EVHH+
Sbjct 30 EAKRYER-YDRDPAVRKRYNRTWKRIRDRYIAEHPLCERCEKQGRI-----TPAEEVHHI 83
Query 231 IPLSSGGADTTDNCVALCPNCHREL 255
PLS GG + T N ++LC +CH E+
Sbjct 84 KPLSCGGTNETSNLMSLCTSCHSEI 108
> UniRef100_F9QCK9 Putative uncharacterized protein n=1 Tax=Mycoplasma
anatis 1340 RepID=F9QCK9_9MOLU
Length=393
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query 205 GICENCG-----KNAPF-YLNDGNPYLEVHHVIPLSS-GGADTTDNCVALCPNCHRELHY 257
IC C +N F + N YLE+HHVI S +D DN V LCP+CH+ L
Sbjct 287 DICYACNDLYPIENRTFKFRNKDMWYLEIHHVISFSKDSSSDQIDNLVKLCPSCHKAL-- 344
Query 258 SKNAKE 263
+KN E
Sbjct 345 TKNRAE 350
> UniRef100_G2T4Q0 RNA-directed DNA polymerase n=1 Tax=Roseburia
hominis A2-183 RepID=G2T4Q0_9FIRM
Length=556
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
+ + KGIC +CG+ P + G +H + GAD + V L +CHRELHYS
Sbjct 494 LYKMQKGICPHCGE--PITVERG---FRIHTEV-----GADFKETNVLLHADCHRELHYS 543
Query 259 KNAKELI 265
KN EL+
Sbjct 544 KNVDELV 550
> UniRef100_F7R353 Recombinase n=2 Tax=Lactobacillus ruminis RepID=F7R353_9LACO
Length=285
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query 135 SFWASIIRGELSELSQ-PTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDP 193
+F+++ I G L L Q + + S+ K L + + PV+ LQ Y R+P
Sbjct 120 NFYSATINGYLDYLDQLKIVNAGEIKESPSERYKIKLLKKPVRKSPVQTTILQ--YPRNP 177
Query 194 MVKAWILQQSKGICENCGKNAPFYL-NDGNPYLEVHHVIPLSSG-----GADTTDNCVAL 247
+S C + F ND ++E HH+IP+ D DN + L
Sbjct 178 HEMLAAKHRSGWKCCYDSSHETFISENDHKNFVEGHHLIPMQHQCDFEYTIDFADNIIPL 237
Query 248 CPNCHRELHYS--KNAKELIEMLYV 270
CP CHR +H++ ++ ++E Y
Sbjct 238 CPTCHRRIHFAIKQDRNRMLEKFYF 262
> UniRef100_Q46AN8 Putative uncharacterized protein n=1 Tax=Methanosarcina
barkeri str. Fusaro RepID=Q46AN8_METBF
Length=268
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD--NCVALCPNCHRELHYSKNAKEL 264
C CG F +G Y EVHH+I L+ +T N + +CP CHR+LHY+ E
Sbjct 193 CMICGYPG-FLKKNGEKYAEVHHMIELNQKAPETLQSWNLLVVCPLCHRKLHYADVKSEF 251
Query 265 IE 266
++
Sbjct 252 LD 253
> UniRef100_Q4C783 RNA-directed DNA polymerase (Reverse transcriptase):HNH
endonuclease n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C783_CROWT
Length=536
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
+Y PM + +L++ KGIC C ++ F +D +EV H+IP S GG D DN AL
Sbjct 446 IYTGTPMRVSKLLKKQKGICPICKQH--FTPDD---LIEVDHIIPKSKGGKDRYDNLQAL 500
Query 248 CPNCH 252
+CH
Sbjct 501 HRHCH 505
> UniRef100_A0L1U4 HNH endonuclease n=1 Tax=Shewanella sp. ANA-3
RepID=A0L1U4_SHESA
Length=224
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EGS K V V + Y RD + + C+ CG N + Y G ++EVHH+ P
Sbjct 123 EGSVKRVLVNK----YERDAKARKACIAHHGCQCKVCGFNFSETYGLHGEGFIEVHHITP 178
Query 233 LS----SGGADTTDNCVALCPNCHRELHYSKNAKELIEM 267
LS S D ++ + +C NCH LH K + E+
Sbjct 179 LSTISKSYQVDPINDLIPVCSNCHSMLHRGKEPLSIDEL 217
> UniRef100_Q4C6E0 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4C6E0_CROWT
Length=165
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
+Y PM + +L++ KGIC C ++ F +D +EV H+IP S GG D DN AL
Sbjct 75 IYTGTPMRVSKLLKKQKGICPICKQH--FTPDD---LIEVDHIIPKSKGGKDRYDNLQAL 129
Query 248 CPNCH 252
+CH
Sbjct 130 HRHCH 134
> UniRef100_G0GVF2 HNH endonuclease n=2 Tax=Klebsiella pneumoniae
RepID=G0GVF2_KLEPN
Length=304
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query 189 YVRDPMVKAWILQQSKGICE-NCGKNAPFYLNDGNP--YLEVHHVIPLSS-----GGADT 240
Y R V L ++ CE NC + P + +P Y E HH++P+S D
Sbjct 190 YPRSKSVSKNALNKADYKCEINC--DHPTFRRRNSPLNYTEPHHIVPMSKQDYFENSLDV 247
Query 241 TDNCVALCPNCHRELHYSKNAKELIEMLYV 270
+N ++LC NCH+++H K ++++ +Y
Sbjct 248 EENIISLCCNCHKQIHLGKGFEDMLRKIYA 277
> UniRef100_C3AFV2 Putative uncharacterized protein n=1 Tax=Bacillus
mycoides DSM 2048 RepID=C3AFV2_BACMY
Length=140
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query 181 EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT 240
E E+L++ + R+ + W + +CE C +L HH IPL +GG +
Sbjct 3 EYEQLRQKF-RNISKQYWKQTKKPKMCEKCFSKTDVHL---------HHKIPLKTGGTND 52
Query 241 TDNCVALCPNCHRELH 256
DN + LC CH E H
Sbjct 53 YDNLIPLCEECHWEFH 68
> UniRef100_C4L1L5 HNH endonuclease n=1 Tax=Exiguobacterium sp.
AT1b RepID=C4L1L5_EXISA
Length=346
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query 141 IRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWIL 200
+ GEL + D+ L + + ++L EG RK V V Y R+P+ + +
Sbjct 204 LMGELKDYITSFFDKDLTAEYYADEVAESLE--EGKRKVVTV----NTYERNPLARKRCM 257
Query 201 QQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLSSGG----ADTTDNCVALCPNCHREL 255
+ C+ C N Y G ++ VHH+ PL G D + +CPNCH L
Sbjct 258 EYYGVSCQVCQINFEKIYGEVGRDFIHVHHIKPLHEIGQNYVVDPITDLRPVCPNCHAML 317
Query 256 HYSKNAKEL-IEML 268
H + + L IE L
Sbjct 318 HRKEGGEYLTIEQL 331
> UniRef100_Q8DK67 Reverse transcriptase n=1 Tax=Thermosynechococcus
elongatus BP-1 RepID=Q8DK67_THEEB
Length=317
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+ ++ GIC CG + + E+HH++P GG D DN V + NCH+++H
Sbjct 250 LWKKQGGICPVCGGEI-----EQDMLTEIHHILPKHKGGTDDLDNLVLIHTNCHKQVH 302
> UniRef100_B3X2L2 Hnh n=2 Tax=Enterobacteriaceae RepID=B3X2L2_SHIDY
Length=302
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query 189 YVRDPMVKAWILQQSKGICE-NCGKNAPFYLNDGNP--YLEVHHVIPLSS-----GGADT 240
Y R V L ++ CE NC + P + +P Y E HH++P+S D
Sbjct 188 YPRSKSVSKNALNKADYKCEINC--DHPTFRRRNSPLNYTEPHHIVPMSKQDYFENSLDV 245
Query 241 TDNCVALCPNCHRELHYSKNAKELIEMLYV 270
+N ++LC NCH+++H K ++++ +Y
Sbjct 246 EENIISLCCNCHKQIHLGKGFEDMLRKIYA 275
> UniRef100_C4XD96 Endonuclease n=1 Tax=Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044 RepID=C4XD96_KLEPN
Length=304
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query 189 YVRDPMVKAWILQQSKGICE-NCGKNAPFYLNDGNP--YLEVHHVIPLSS-----GGADT 240
Y R V L ++ CE NC + P + +P Y E HH++P+S D
Sbjct 190 YPRSKSVSKNALNKADYKCEINC--DHPTFRRRNSPLNYTEPHHIVPMSKQDYFENSLDV 247
Query 241 TDNCVALCPNCHRELHYSKNAKELIEMLYV 270
+N ++LC NCH+++H K ++++ +Y
Sbjct 248 EENIISLCCNCHKQIHLGKGFEDMLRKIYA 277
> UniRef100_A3YQ82 MnlI restriction endonuclease n=1 Tax=Campylobacter
jejuni subsp. jejuni 260.94 RepID=A3YQ82_CAMJE
Length=259
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query 205 GICENCGK-----NAPFYLNDGNPYLEVHHVIPLS-SGGADTTDNCVALCPNCHREL 255
+C C K + F + +G YLE+HH I + S D DN V LCP CHR L
Sbjct 154 DLCAACNKTYNIDDRSFKMKNGFYYLELHHNIAFAYSNECDELDNLVKLCPTCHRAL 210
> UniRef100_D6TC63 RNA-directed DNA polymerase (Reverse transcriptase)
n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TC63_9CHLR
Length=598
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VKA +LQ+ +G C CG Y D + +E+ H+ P S GG + N AL +CH E
Sbjct 505 VKAKLLQKQEGKCRWCG----LYFKDED-LIEIDHITPKSEGGGEELSNKFALHRHCHDE 559
Query 255 LHYSK 259
H K
Sbjct 560 RHSKK 564
> UniRef100_Q8DL77 Reverse transcriptase n=1 Tax=Thermosynechococcus
elongatus BP-1 RepID=Q8DL77_THEEB
Length=562
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+ ++ GIC CG + + E+HH++P GG D DN V + NCH+++H
Sbjct 495 LWKKQGGICPVCGGEI-----EQDMLTEIHHILPKHKGGTDDLDNLVLIHTNCHKQVH 547
> UniRef100_D6TJ96 RNA-directed DNA polymerase (Reverse transcriptase)
n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJ96_9CHLR
Length=598
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VKA +LQ+ +G C CG Y D + +E+ H+ P S GG + N AL +CH E
Sbjct 505 VKAKLLQKQEGKCRWCG----LYFKDED-LIEIDHITPKSEGGGEELSNKFALHRHCHDE 559
Query 255 LHYSK 259
H K
Sbjct 560 RHSKK 564
> UniRef100_D6TC34 RNA-directed DNA polymerase (Reverse transcriptase)
n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TC34_9CHLR
Length=598
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VKA +LQ+ +G C CG Y D + +E+ H+ P S GG + N AL +CH E
Sbjct 505 VKAKLLQKQEGKCRWCG----LYFKDED-LIEIDHITPKSEGGGEELSNKFALHRHCHDE 559
Query 255 LHYSK 259
H K
Sbjct 560 RHSKK 564
> UniRef100_D6TRK9 RNA-directed DNA polymerase (Reverse transcriptase)
n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRK9_9CHLR
Length=598
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VKA +LQ+ +G C CG Y D + +E+ H+ P S GG + N AL +CH E
Sbjct 505 VKAKLLQKQEGKCRWCG----LYFKDED-LIEIDHITPKSEGGGEELSNKFALHRHCHDE 559
Query 255 LHYSK 259
H K
Sbjct 560 RHSKK 564
> UniRef100_D6TIY0 RNA-directed DNA polymerase (Reverse transcriptase)
n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TIY0_9CHLR
Length=598
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VKA +LQ+ +G C CG Y D + +E+ H+ P S GG + N AL +CH E
Sbjct 505 VKAKLLQKQEGKCRWCG----LYFKDED-LIEIDHITPKSEGGGEELSNKFALHRHCHDE 559
Query 255 LHYSK 259
H K
Sbjct 560 RHSKK 564
> UniRef100_D6TFF7 RNA-directed DNA polymerase (Reverse transcriptase)
n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFF7_9CHLR
Length=598
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VKA +LQ+ +G C CG Y D + +E+ H+ P S GG + N AL +CH E
Sbjct 505 VKAKLLQKQEGKCRWCG----LYFKDED-LIEIDHITPKSEGGGEELSNKFALHRHCHDE 559
Query 255 LHYSK 259
H K
Sbjct 560 RHSKK 564
> UniRef100_D5CK95 HNH endonuclease n=1 Tax=Enterobacter cloacae
subsp. cloacae ATCC 13047 RepID=D5CK95_ENTCC
Length=302
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query 224 YLEVHHVIPLSSGGA-----DTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
Y E HH++P+S A D +N ++LC NCH+++H + +++++ +Y RL K
Sbjct 224 YTEPHHIVPMSRQDAFDTSLDVEENIISLCCNCHKQIHLGQGYEDMLKEIYTARKRLLK 282
> UniRef100_F4Y301 Restriction endonuclease n=1 Tax=Lyngbya majuscula
3L RepID=F4Y301_9CYAN
Length=156
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query 196 KAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHREL 255
KA +L++ KG C +CG D + +E+HH++P ++GG + +N L +CH
Sbjct 87 KAKLLKRQKGKCSHCG----LTFRDRDE-MEMHHILPRANGGTNKDENLELLHLHCHDAK 141
Query 256 HYSK-NAKELIE 266
H +K NAKEL E
Sbjct 142 HGTKVNAKELDE 153
> UniRef100_C1MEX8 HNH endonuclease n=1 Tax=Citrobacter sp. 30_2
RepID=C1MEX8_9ENTR
Length=304
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query 224 YLEVHHVIPLSSGGA-----DTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
Y E HH++P+S A D +N ++LC NCH+++H + +++++ +Y RL K
Sbjct 226 YTEPHHIVPMSRQDAFDTSLDVEENIISLCCNCHKQIHLGQGYEDMLKEIYTARKRLLK 284
> UniRef100_Q8TKB6 Hnh endonuclease n=1 Tax=Methanosarcina acetivorans
C2A RepID=Q8TKB6_METAC
Length=279
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query 171 SQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHH 229
S PEG + R Y R+ + + +C+ CG + Y G Y+EVHH
Sbjct 172 STPEGKKILCYTTR----YERNAQNRRNAIAIHGTVCQGCGFDFEKTYGEIGRDYIEVHH 227
Query 230 VIPL----SSGGADTTDNCVALCPNCHRELHYSKNA----KELIEMLYVN 271
V PL S + + + +C NCHR +H K++ KEL E+L N
Sbjct 228 VKPLCEEEGSVPINAETDLICVCANCHRMIHRRKDSVLSLKELQELLLAN 277
> UniRef100_F7KW75 Putative uncharacterized protein n=1 Tax=Lachnospiraceae
bacterium 5_1_57FAA RepID=F7KW75_9FIRM
Length=263
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNP-YLEVHHVIPLSSGG------ADT 240
+Y R V + L ++ +CE ++ F N Y E HH++PL + D
Sbjct 151 LYQRSKEVSSNALMKAGFLCEVDAEHPVFIRKHSNENYTEPHHLVPLFAQNDFPDINLDR 210
Query 241 TDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK 277
N V+LC +CH LHY + E++ LY++ L K
Sbjct 211 EQNVVSLCSHCHNLLHYGSDIDEVLYKLYMSRKELLK 247
> UniRef100_C4U1S6 HNH nuclease n=1 Tax=Yersinia kristensenii ATCC
33638 RepID=C4U1S6_YERKR
Length=330
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query 192 DPMVKAWILQQSKGICENCGKNAPFYL-NDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
DP V+ +L++ C NCG ND LE+HH+ GG +T +N + LC
Sbjct 247 DP-VRVKVLERDHHSCRNCGWQYQLKKPNDPRSLLELHHIEHHVDGGENTVENLLTLCNV 305
Query 251 CHRELH 256
CH E+H
Sbjct 306 CHDEVH 311
> UniRef100_Q8DMT0 Reverse transcriptase n=1 Tax=Thermosynechococcus
elongatus BP-1 RepID=Q8DMT0_THEEB
Length=564
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PE + + ++L+K + ++ + ++ GIC CG + + ++HH++P
Sbjct 471 PEWAEYFEKRKKLKKAPAQYRRIRRELWKKQGGICPVCGGEI-----EQDMLTDIHHILP 525
Query 233 LSSGGADTTDNCVALCPNCHRELH 256
GG+D DN V + NCH+++H
Sbjct 526 KHKGGSDDLDNLVLIHANCHKQVH 549
> UniRef100_Q8DJR1 Reverse transcriptase n=1 Tax=Thermosynechococcus
elongatus BP-1 RepID=Q8DJR1_THEEB
Length=564
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PE + + ++L+K + ++ + ++ GIC CG + + ++HH++P
Sbjct 471 PEWAEYFEKRKKLKKAPAQYRRIRRELWKKQGGICPVCGGEI-----EQDMLTDIHHILP 525
Query 233 LSSGGADTTDNCVALCPNCHRELH 256
GG+D DN V + NCH+++H
Sbjct 526 KHKGGSDDLDNLVLIHANCHKQVH 549
> UniRef100_Q4C0L4 RNA-directed DNA polymerase (Reverse transcriptase):HNH
endonuclease n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C0L4_CROWT
Length=471
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query 165 LIKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN 219
+++ TL +PE S P + + + Y P A +L++ KGIC C + F
Sbjct 355 ILRHTLVKPEAS--PYDGNWTYWSKRRGTYSGTPTRVAKLLKKQKGICPQCKQY--FTPE 410
Query 220 DGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
D +EV H+IP S GG DT +N AL +CH
Sbjct 411 D---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 440
> UniRef100_Q8CM00 Reverse transcriptase n=1 Tax=Thermosynechococcus
elongatus BP-1 RepID=Q8CM00_THEEB
Length=564
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
PE + + ++L+K + ++ + ++ GIC CG + + ++HH++P
Sbjct 471 PEWAEYFEKRKKLKKAPAQYRRIRRELWKKQGGICPVCGGEI-----EQDMLTDIHHILP 525
Query 233 LSSGGADTTDNCVALCPNCHRELH 256
GG+D DN V + NCH+++H
Sbjct 526 KHKGGSDDLDNLVLIHANCHKQVH 549
> UniRef100_D7D1K3 HNH endonuclease n=1 Tax=Geobacillus sp. C56-T3
RepID=D7D1K3_GEOSC
Length=253
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EG +K V V R Y R+ + LQ+ C C + Y G ++EVHH+IP
Sbjct 144 EGGKKLVAVNR----YERNARARRLCLQKYGYRCVVCQFDFEEVYGEIGKGFIEVHHLIP 199
Query 233 LSSGGADTT----DNCVALCPNCHRELH 256
LS G T D+ +CPNCH LH
Sbjct 200 LSEIGEQYTVNPFDDLRPVCPNCHAMLH 227
> UniRef100_Q4CAS8 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4CAS8_CROWT
Length=164
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query 152 TDDESLLNMRVSKLIKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKAWILQQSKGI 206
T D L + +++ + L +PE S P + + + Y P A +L++ KGI
Sbjct 35 TRDYVLYHHAETEIKRHQLVKPEAS--PYDGNWTYWSKRRGTYTGTPTRVAKLLKKQKGI 92
Query 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
C C ++ F D +EV H+IP S GG DT N AL +CH
Sbjct 93 CPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYSNLQALHRHCH 133
> UniRef100_A4T2Q8 HNH endonuclease n=2 Tax=Mycobacterium RepID=A4T2Q8_MYCGI
Length=220
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query 190 VRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCP 249
R PM +A ++ + + C CG A V HVIP S GGA T +NCVA C
Sbjct 119 ARIPMTRAALMHRDRFRCAYCGSKAD----------TVDHVIPRSRGGAHTWENCVAACS 168
Query 250 NC-HRE 254
C HR+
Sbjct 169 ACNHRK 174
> UniRef100_E0UGW6 RNA-directed DNA polymerase n=1 Tax=Cyanothece
sp. PCC 7822 RepID=E0UGW6_CYAP2
Length=606
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
+L++ KG C +CG + ++G+ LEV H+IP SSGG D +N L +CH E
Sbjct 527 LLKEQKGKCNHCG----LFFSEGDK-LEVDHIIPKSSGGRDEYENLQLLHRHCHDE 577
> UniRef100_Q4BXA1 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4BXA1_CROWT
Length=165
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query 165 LIKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN 219
+++ TL +PE S P + + + Y P A +L++ KGIC C + F
Sbjct 49 ILRHTLVKPEAS--PYDGNWTYWSKRRGTYSGTPTRVAKLLKKQKGICPQCKQY--FTPE 104
Query 220 DGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
D +EV H+IP S GG DT +N AL +CH
Sbjct 105 D---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 134
> UniRef100_C3RB64 Putative uncharacterized protein n=1 Tax=Bacteroides
dorei 5_1_36/D4 RepID=C3RB64_9BACE
Length=274
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query 158 LNMRVSKLIKKTLSQPEGSRKPVEVE-RLQKV----YVRDPMVKAWILQQSKGICENCGK 212
+ S L +S+ E +K V+ E +Q++ Y R+P+ + L + C CG
Sbjct 148 FELIFSLLTITDISEEEFLQKAVQTEGTIQEIKSIRYERNPINRKLCLYKKGYTCAVCGM 207
Query 213 N-APFYLNDGNPYLEVHHVIPLSSGGA----DTTDNCVALCPNCHRELH 256
N Y + G ++EVHH P+S G D + V LC NCH H
Sbjct 208 NFQDVYGDIGKGFIEVHHTTPVSKMGEGYNLDIERDLVPLCSNCHSMTH 256
> UniRef100_F9VXV8 Putative uncharacterized protein n=1 Tax=Gordonia
alkanivorans NBRC 16433 RepID=F9VXV8_9ACTO
Length=474
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query 148 LSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGIC 207
LS+ +E+ + + + + ++ G R + + R Q+ + M++A L+
Sbjct 294 LSEAEVEEAACGASLREALSRRVAGSPGKRALLGLGRKQRAPSK-AMIRALFLRDRCCQT 352
Query 208 ENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNA 261
CG+ +L HHV+ S+GG DN + LC +CHR LH + A
Sbjct 353 PGCGRTR---------HLHAHHVVFWSAGGETELDNLILLCGSCHRALHRGEFA 397
> UniRef100_E1KQC7 HNH endonuclease domain protein n=1 Tax=Prevotella
disiens FB035-09AN RepID=E1KQC7_9BACT
Length=367
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
+ ++ KGIC CGK+ F + + +E H+IP GG DNC LC C+R
Sbjct 314 VYEEQKGICPICGKH--FEIEE----MEADHIIPWHKGGKTEKDNCQMLCMKCNR 362
> UniRef100_A6FSV0 HNH nuclease n=1 Tax=Roseobacter sp. AzwK-3b
RepID=A6FSV0_9RHOB
Length=114
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query 196 KAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
+AW ++++G CE CG LN G+ E H IP GG ++ +NCV LC CHR+
Sbjct 13 QAW--ERARGKCEECG----VKLNVGD-RREFDHRIPCGLGGDNSLENCVVLCAACHRD 64
> UniRef100_Q3ZAC8 HNH endonuclease domain protein n=1 Tax=Dehalococcoides
ethenogenes 195 RepID=Q3ZAC8_DEHE1
Length=118
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query 206 ICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+CE C K P EVHH++PLS GG++ N +ALC +CH
Sbjct 65 LCEECDKQGKL-----TPAEEVHHILPLSKGGSNEKSNLMALCKSCH 106
> UniRef100_C4V1Z5 Putative uncharacterized protein n=1 Tax=Selenomonas
flueggei ATCC 43531 RepID=C4V1Z5_9FIRM
Length=363
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query 201 QQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
Q+ KGIC CGK F + + ++ H+ P S GG T +NC LC C+R
Sbjct 312 QRQKGICPKCGKQ--FQIEE----MQADHITPWSKGGKTTPENCQMLCAPCNR 358
> UniRef100_Q4C651 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4C651_CROWT
Length=379
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query 163 SKLIKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFY 217
+++ + TL +PE S P + + + Y P A +L++ KGIC C ++ F
Sbjct 261 TEIKRHTLVKPEAS--PYDGNWTYWSKRRGTYTGTPTRVAKLLKKQKGICPQCKQH--FT 316
Query 218 LNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+D +EV H+IP S GG D +N AL +CH
Sbjct 317 PDD---LIEVDHIIPKSKGGKDEFNNLQALHRHCH 348
> UniRef100_D0IIJ2 HNH endonuclease n=2 Tax=Vibrio RepID=D0IIJ2_9VIBR
Length=244
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLND-GNPYLEVHHVIP 232
EG+RK + V Y R+ +A ++ C C N Y D G Y+ VHH +
Sbjct 140 EGARKQITV----NAYERNHRARAQCIEHYGNSCYICSFNFFEYFGDLGAGYIHVHHQVD 195
Query 233 LSSGG----ADTTDNCVALCPNCHRELHYSKNA 261
L+ G + ++ +CPNCH LH +K A
Sbjct 196 LAHVGEAYIVNPIEDLKPVCPNCHAMLHKTKPA 228
> UniRef100_D9W784 HNH endonuclease n=1 Tax=Streptomyces himastatinicus
ATCC 53653 RepID=D9W784_9ACTO
Length=356
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query 197 AWILQQSKGI-CENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTT--DNCVALCPNCH 252
A +L+ + + CE CG + Y G Y+E HHV+PL G T + +C NCH
Sbjct 248 AAVLKSGRTLACEACGFDFGAVYGERGEGYIECHHVVPLHEAGEGKTKLSDLALICSNCH 307
Query 253 RELHYS 258
R +H S
Sbjct 308 RMIHRS 313
> UniRef100_Q8GMB4 Group II intron-associated open reading frame
n=1 Tax=Azotobacter vinelandii RepID=Q8GMB4_AZOVI
Length=563
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query 183 ERLQKVYVRD-----PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGG 237
ERL+ + R ++ W+ Q + C C + F +HH+I GG
Sbjct 477 ERLEYAWRRSDEGKRKTLRLWLGQSKR--CPMCKQLITFETG-----WNIHHIIKRHMGG 529
Query 238 ADTTDNCVALCPNCHRELHYSKNA 261
D DN V L PNCHR+LH + A
Sbjct 530 GDELDNLVLLHPNCHRQLHSAAPA 553
> UniRef100_C1DQC3 RNA-directed DNA polymerase n=1 Tax=Azotobacter
vinelandii DJ RepID=C1DQC3_AZOVD
Length=515
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query 183 ERLQKVYVRD-----PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGG 237
ERL+ + R ++ W+ Q + C C + F +HH+I GG
Sbjct 429 ERLEYAWRRSDEGKRKTLRLWLGQSKR--CPMCKQLITFETG-----WNIHHIIKRHMGG 481
Query 238 ADTTDNCVALCPNCHRELHYSKNA 261
D DN V L PNCHR+LH + A
Sbjct 482 GDELDNLVLLHPNCHRQLHSAAPA 505
> UniRef100_Q4BZ69 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4BZ69_CROWT
Length=87
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query 185 LQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNC 244
++ Y P A +L++ KGIC C ++ F D +EV H+IP S GG DT +N
Sbjct 11 IRGTYTGTPTRVAKLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYNNL 65
Query 245 VALCPNCH 252
AL +CH
Sbjct 66 QALHRHCH 73
> UniRef100_A0LM25 HNH endonuclease n=1 Tax=Syntrophobacter fumaroxidans
MPOB RepID=A0LM25_SYNFM
Length=309
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNP-YLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
V+ +LQ+ C CG + + N +P +LE HHV P GG +T +N + LC CH
Sbjct 246 VRRQVLQRDAHKCLRCGWSHERW-NPSDPRHLEAHHVDPHGRGGENTPENLITLCNICHD 304
Query 254 ELH 256
+H
Sbjct 305 AVH 307
> UniRef100_C6WXV3 HNH endonuclease n=1 Tax=Methylotenera mobilis
JLW8 RepID=C6WXV3_METML
Length=238
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query 191 RDPMVKAWILQQSKG----ICENCGKNAPFYLNDG---NPYLEVHHVIPLSSGGADTT-- 241
R+P ++ +L + CE CG AP + ++ + E HH+IPLS+ G T
Sbjct 145 REPKLRGQLLSSRRVSGNLFCEMCG--APPHTSNAMLQEAHFEAHHIIPLSNTGVRKTRL 202
Query 242 DNCVALCPNCHRELHYS 258
+ LC NCHR LH +
Sbjct 203 SDLALLCANCHRLLHRA 219
> UniRef100_D2QLF4 HNH endonuclease n=1 Tax=Spirosoma linguale
DSM 74 RepID=D2QLF4_SPILD
Length=367
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query 166 IKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPY 224
+ T + EG+ K + V R Y RD + + C+ C + Y N G Y
Sbjct 238 VPSTKTYVEGAVKQITVNR----YERDQDARTDCINHYGAKCQACEFDFEEIYGNIGKGY 293
Query 225 LEVHHVIPL----SSGGADTTDNCVALCPNCHRELHYSKNAKELIEM 267
+ VHH+ P +S D + + +CPNCH LH K ++ ++
Sbjct 294 IHVHHIKPFNEIKTSYRVDPIKDLIPVCPNCHAMLHTGKEVMDIADL 340
> UniRef100_C9Y5Y2 Putative uncharacterized protein n=1 Tax=Cronobacter
turicensis z3032 RepID=C9Y5Y2_CROTZ
Length=208
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query 224 YLEVHHVIPLSSGGA-----DTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRL 275
Y E HH++P+S A D +N ++LC NCH+++H + +++++ +Y RL
Sbjct 130 YTEPHHIVPMSRQDAFDTSLDVEENIISLCCNCHKQIHLGQGYEDMLKEIYTARKRL 186
> UniRef100_F5YX87 HNH endonuclease n=1 Tax=Mycobacterium sp. JDM601
RepID=F5YX87_MYCSD
Length=329
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query 145 LSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSK 204
+ +L P DDE + +L+++ E +K + +++ R P V
Sbjct 208 VEQLLTPIDDEDD-EAKEGRLLQRQHFVRERDKK-LRAKKIADFLTRHPRVH-------- 257
Query 205 GICENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTTD--NCVALCPNCHRELH 256
CE C + Y G+ Y EVHHV+PL + G T + V LC NCHR +H
Sbjct 258 --CEVCTFDFEATYGERGHEYTEVHHVVPLHASGETKTKLADLVLLCANCHRMIH 310
> UniRef100_Q4C739 RNA-directed DNA polymerase (Reverse transcriptase):HNH
endonuclease n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C739_CROWT
Length=596
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 19/120 (15%)
Query 136 FWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSR---KPVEVERLQKVYVRD 192
FW I+G + L + + +++ T +PE S + + Y
Sbjct 462 FWTFQIKGAV-----------LYHHAETGILRHTWVKPEASLYDGNWTYWSKRRGTYSGT 510
Query 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P A +L++ KGIC C + F D +EV H+IP S GG DT +N AL +CH
Sbjct 511 PTRVAKLLKKQKGICPQCKQY--FTPED---LIEVDHIIPKSKGGKDTYNNLQALHRDCH 565
> UniRef100_D8G147 RNA-directed DNA polymerase n=1 Tax=Oscillatoria
sp. PCC 6506 RepID=D8G147_9CYAN
Length=571
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y P A ++++ KG+C +CG Y + +EV H+ P SSGG DT DN L
Sbjct 494 YPETPNRVATLIKKQKGVCPHCG----LYFTSTD-IVEVDHIKPTSSGGKDTYDNLQLL- 547
Query 249 PNCHRELHYSKNAKE 263
HR H +K A++
Sbjct 548 ---HRHCHDTKTAQD 559
> UniRef100_Q6EME6 Hnh endonuclease n=1 Tax=Escherichia coli RepID=Q6EME6_ECOLX
Length=302
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query 189 YVRDPMVKAWILQQSKGICE-NCGKNAPFYLNDGNP--YLEVHHVIPLSS-----GGADT 240
Y R V L ++ C+ NC + P + +P Y E HH++P+S D
Sbjct 188 YPRSKSVSKNALNKADYKCQINC--DHPTFRRRNSPLNYTEPHHIVPMSKQDYFENSLDV 245
Query 241 TDNCVALCPNCHRELHYSKNAKELIEMLYV 270
+N ++LC NCH+++H K ++++ +Y
Sbjct 246 EENIISLCCNCHKQIHLGKGFEDMLRKIYA 275
> UniRef100_A5V9C7 HNH endonuclease n=1 Tax=Sphingomonas wittichii
RW1 RepID=A5V9C7_SPHWW
Length=426
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query 181 EVERLQKVYVR----DPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSG 236
E ++QK +V + KA+ +C+ C + +++HH++PLSSG
Sbjct 304 EGNKVQKTHVTIERNSGLRKAFFAANPTTVCDVCNLDTARSYPWTERVMDLHHLLPLSSG 363
Query 237 ----GADTT-DNCVALCPNCHRELH 256
G TT D+ V LCP+CHR +H
Sbjct 364 TRVIGRGTTFDDLVPLCPSCHRAVH 388
> UniRef100_D2S2Y4 HNH endonuclease n=1 Tax=Haloterrigena turkmenica
DSM 5511 RepID=D2S2Y4_HALTV
Length=221
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPL 233
G+R P R + VY D C++CG+ + + + L HH++PL
Sbjct 19 SGNRPPDWEARRKTVYRHD-----------NWTCQSCGRQSGPHAGNEGVRLHAHHIVPL 67
Query 234 SSGGADTTDNCVALCPNCHRELH 256
S GG++ N LC CH+ H
Sbjct 68 SEGGSNRLSNLETLCEPCHQNQH 90
> UniRef100_C3BJL8 Paclitaxel/taxanoid biosynthesis susceptibility
protein TS1 n=1 Tax=Bacillus pseudomycoides DSM 12442 RepID=C3BJL8_9BACI
Length=374
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
+ ++ + C+ C K L HH+I SGG+D DN V + CH++
Sbjct 141 TRYYVFTRDHYTCQICKKKGGI--------LHTHHIIERCSGGSDMADNLVTVHEECHQK 192
Query 255 LHYS------KNAKELIEMLYVNINRLQ 276
H K K+ E ++NI RLQ
Sbjct 193 FHQGTIKHIFKKPKQYKETAFMNILRLQ 220
> UniRef100_Q0HZ96 RNA-directed DNA polymerase n=1 Tax=Shewanella
sp. MR-7 RepID=Q0HZ96_SHESR
Length=549
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 0/32 (0%)
Query 227 VHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
+HH++ GG+D DN V L PNCHR+LH S
Sbjct 518 IHHIVERVRGGSDEMDNLVLLHPNCHRQLHSS 549
> UniRef100_B8I839 HNH endonuclease n=1 Tax=Clostridium cellulolyticum
H10 RepID=B8I839_CLOCE
Length=119
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 16/82 (19%)
Query 181 EVERLQKVYVRDPMVK-----AWILQQSKGI-----CENCGKNAPFYLNDGNPYLEVHHV 230
E R +K Y RDP + AW + + I CE C + P EVHH+
Sbjct 30 EAARYEK-YQRDPATRKRYGRAWKRIRDRYIAAHPLCEECKRQEKL-----TPAAEVHHI 83
Query 231 IPLSSGGADTTDNCVALCPNCH 252
+PLS GG N +ALC CH
Sbjct 84 LPLSRGGTHDRSNLMALCTPCH 105
> UniRef100_C4UQ38 Putative uncharacterized protein n=1 Tax=Yersinia
rohdei ATCC 43380 RepID=C4UQ38_YERRO
Length=206
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 35/177 (19%)
Query 111 GRKEIPSGNRTKRILINVPG-IYSDSF----------WASIIRGELSELSQPTDDESLLN 159
R I S R++ + G Y+DSF + S + ELS P + +LN
Sbjct 41 NRTTISSNEEITRLISKMSGGYYADSFVSNCSTAMRRYLSFVNSELSYFHYP---DEILN 97
Query 160 MRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYL 218
S+ I EG++K + V Y RD + ++ C C N Y
Sbjct 98 H--SEYI-------EGAKKQIIVNS----YERDRDARNKAIEIHGLNCSVCDMNFEDVYG 144
Query 219 NDGNPYLEVHHVIPLSSGG----ADTTDNCVALCPNCHRELHYSKN---AKELIEML 268
G ++ VHH+ PL D D+ + +CPNCH LH KN KEL +++
Sbjct 145 EIGVGFIHVHHLKPLHEINKEYHVDPEDDLITVCPNCHAMLHRLKNRPSKKELKDLI 201
> UniRef100_B0K6Q9 HNH endonuclease n=3 Tax=Thermoanaerobacter
RepID=B0K6Q9_THEPX
Length=119
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 18/90 (20%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVK-----AWILQQSKGI-----CENCGKNAPFYLNDGN 222
PE ++K E R +K Y RDP + AW + + I CE C +
Sbjct 24 PEHAKK--EASRYEK-YQRDPETRKRYGRAWKRIRDRYITAHPLCEECKRQGKL-----T 75
Query 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P EVHH++PL+ GG N +ALC CH
Sbjct 76 PATEVHHILPLARGGTHDESNLMALCTPCH 105
> UniRef100_D8MQN6 Predicted endonuclease n=1 Tax=Erwinia billingiae
Eb661 RepID=D8MQN6_ERWBE
Length=240
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EG++ V V Y RDP + ++ C+ CG + Y G ++ VHH+ P
Sbjct 139 EGAKTRVTVNS----YERDPRARQECIRHYGTACKGCGFDFGKVYGEHGKGFIHVHHIKP 194
Query 233 LSSGGA----DTTDNCVALCPNCHRELH 256
+ + G D + + LCPNCH +H
Sbjct 195 IHTLGEGYSIDPIVDLIPLCPNCHAMVH 222
> UniRef100_D2RK49 HNH endonuclease n=1 Tax=Acidaminococcus fermentans
DSM 20731 RepID=D2RK49_ACIFV
Length=128
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query 164 KLIKKTLSQPEGSRKPVEVERLQKVY--VRDPMVKAWILQQSKGICENCGKNAPFYLNDG 221
K+I K + E R P +R K + +RD V S +CE C KN + + +
Sbjct 28 KIIAKRYEKYE--RSPATKKRYGKSWKKIRDAYV------SSHPLCELCLKNGRYVVAE- 78
Query 222 NPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
EVHH PL+ GG +N +ALC CH +H
Sbjct 79 ----EVHHKKPLAEGGTHAWNNLIALCKACHARIH 109
> UniRef100_Q4C4V3 RNA-directed DNA polymerase n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4C4V3_CROWT
Length=578
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
Y P + +L++ KGIC C ++ F D +EV H+IP S GG DT +N AL
Sbjct 505 TYTGTPARVSRLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGLDTYNNLQAL 559
Query 248 CPNCH 252
+CH
Sbjct 560 HRHCH 564
> UniRef100_Q4C5H9 RNA-directed DNA polymerase n=1 Tax=Crocosphaera
watsonii WH 8501 RepID=Q4C5H9_CROWT
Length=594
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKV---YVRDPMVKAWI 199
G+ + T + SL +K+++ L +PE S K Y P + +
Sbjct 456 GKHGHWTFQTKEISLYYHAETKIMRHQLVKPEASYYDGNWSYWSKRRGNYTGTPTSVSKL 515
Query 200 LQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
L++ KG C C ++ F +D +EV H+IP S GG DT +N AL +CH
Sbjct 516 LKKQKGRCPQCKQH--FTPDD---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 563
> UniRef100_B0JVV8 RNA-directed DNA polymerase n=1 Tax=Microcystis
aeruginosa NIES-843 RepID=B0JVV8_MICAN
Length=577
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P KA +L++ +G C CG Y DG+ LE H+IP S GG + DN L +CH
Sbjct 501 PPEKAVLLKRQQGRCAYCG----LYFQDGD-ILETDHIIPKSKGGKNNRDNKQLLHRHCH 555
> UniRef100_D6TIG6 HNH endonuclease n=1 Tax=Ktedonobacter racemifer
DSM 44963 RepID=D6TIG6_9CHLR
Length=411
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Query 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSK 259
C++CGK LE HH+I GG DT N + LC CH++LH K
Sbjct 194 CQHCGKQ--------KVRLEAHHLIFKGEGGKDTLTNLLTLCEACHKKLHQGK 238
> UniRef100_D2AT16 Putative uncharacterized protein n=1 Tax=Streptosporangium
roseum DSM 43021 RepID=D2AT16_STRRD
Length=419
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query 190 VRDPMVKAWILQQSKGICENCGKNAPFYLND----GNPYLEVHHVIPLSSGGADTTDNCV 245
R K +L + KG CEN P +D G P L+V H+ + GG D + +
Sbjct 323 ARSTPAKRAVLLRCKGACENPDCENPGRPSDTSVGGGPILDVDHIDDHAKGGRDYPELMI 382
Query 246 ALCPNCH 252
ALCPNCH
Sbjct 383 ALCPNCH 389
> UniRef100_B7JSJ9 DNA helicase, putative n=1 Tax=Bacillus cereus
AH820 RepID=B7JSJ9_BACC0
Length=278
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query 207 CENCGKNAPFYL--NDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKEL 264
C+ CG + N +EV H+I S GG +T DN LCPNCH +K + +
Sbjct 196 CQVCGFKEEYIKANNKKGWIIEVDHIIEKSKGGGETFDNLWVLCPNCH-----AKKTRGI 250
Query 265 IEM 267
IE+
Sbjct 251 IEI 253
> UniRef100_C3G8U4 HNH endonuclease n=1 Tax=Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1 RepID=C3G8U4_BACTU
Length=258
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query 166 IKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPY 224
+ + LS EG+RK V V + Y R + + ++ C C + Y + G +
Sbjct 147 VPEQLSIMEGNRKTVVVNQ----YERSAVARRKCIEHHGCYCHVCHLDFKKQYGSLGKGF 202
Query 225 LEVHHVIPLSSGG----ADTTDNCVALCPNCHRELHY-SKNAKEL-IEMLYVNINR 274
+ VHH IPLS G D ++ + +CPNCH LH S N L IE L V +N+
Sbjct 203 IHVHHKIPLSEIGDEYEVDYVNDLIPVCPNCHAMLHRKSMNGSFLTIEELKVLMNK 258
> UniRef100_D0XIE3 Putative uncharacterized protein n=1 Tax=Vibrio
harveyi 1DA3 RepID=D0XIE3_VIBHA
Length=266
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLSSGG----ADTTD 242
Y R+P ++ + C CG + Y + G Y+ +HH +P+S G D
Sbjct 173 TYERNPKLRRQAIAIHGATCAACGFDYGKVYGSIGEGYIHIHHKVPVSRLGISTLVDPEK 232
Query 243 NCVALCPNCHRELHYSKNAKELIEMLYV 270
+ V LC NCH +H K+ +E L V
Sbjct 233 DLVPLCANCHAMVHRKKDQTLSVEELKV 260
> UniRef100_D2YH85 Putative uncharacterized protein n=1 Tax=Vibrio
mimicus VM603 RepID=D2YH85_VIBMI
Length=208
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSS--GGADTTDNCVA 246
++RD + + +++ C+ C F L +G PY E HH+ PL G D N +
Sbjct 106 FIRDSKLSQLVKKKNNYKCQICA--FTFLLPNGKPYAEAHHLKPLGKEHDGPDIEGNLIC 163
Query 247 LCPNCHRELHYS----------KNAKELIEMLYVNIN 273
+CPN H L Y KN+K I +++ N
Sbjct 164 VCPNHHAMLDYCSLKLDVNAIVKNSKHEIMKEFIDYN 200
> UniRef100_F7PFN0 Putative uncharacterized protein n=1 Tax=Halorhabdus
tiamatea SARL4B RepID=F7PFN0_9EURY
Length=90
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELH--YSKNAKELIE 266
LE HH+IP G D+ +N V +CPNCH+ L Y ++ EL+E
Sbjct 18 LEEHHLIPARRNGPDSDENLVTVCPNCHKALENIYDRSFWELVE 61
> UniRef100_Q0VRW5 Reverse transcriptase/maturase homolog n=1 Tax=Alcanivorax
borkumensis SK2 RepID=Q0VRW5_ALCBS
Length=552
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 20/30 (66%), Gaps = 0/30 (0%)
Query 227 VHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+HHVI GG D DN V L PNCHR+LH
Sbjct 518 IHHVIEQHKGGTDKLDNLVLLHPNCHRQLH 547
> UniRef100_E5XGH2 HNH endonuclease domain-containing protein n=2
Tax=unclassified Lachnospiraceae RepID=E5XGH2_9FIRM
Length=86
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query 206 ICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAK 262
+CE C K + + EVHH++PL+ GG++ N ++LC +CH ++H + +
Sbjct 35 LCEQCLKEGRYVAVE-----EVHHIVPLAEGGSNDESNLMSLCRSCHEKIHRERGDR 86
> UniRef100_Q4C1P0 RNA-directed DNA polymerase (Reverse transcriptase):HNH
endonuclease n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C1P0_CROWT
Length=596
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query 165 LIKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN 219
+++ T +PE S P + + + Y P A +L++ KGIC C + F
Sbjct 480 ILRHTWVKPEAS--PYDGNWTYWSKRRGTYSGTPTRVAKLLKKQKGICPQCKQY--FTPE 535
Query 220 DGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
D +EV H+IP S GG DT +N AL +CH
Sbjct 536 D---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 565
> UniRef100_A3DFY5 HNH endonuclease n=1 Tax=Clostridium thermocellum
ATCC 27405 RepID=A3DFY5_CLOTH
Length=119
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 15/74 (20%)
Query 189 YVRDPMVKAWILQQSKGI----------CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGA 238
Y RDP + ++ K I CE C K P EVHH+IPLS GG
Sbjct 37 YERDPQTRKRYDRRWKRIRDRYISEHPLCEECQKYGRL-----TPAEEVHHIIPLSKGGT 91
Query 239 DTTDNCVALCPNCH 252
+ N ++LC CH
Sbjct 92 NADSNLMSLCKQCH 105
> UniRef100_Q4C2M6 RNA-directed DNA polymerase (Reverse transcriptase):HNH
endonuclease n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C2M6_CROWT
Length=596
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query 165 LIKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN 219
+++ T +PE S P + + + Y P A +L++ KGIC C + F
Sbjct 480 ILRHTWVKPEAS--PYDGNWTYWSKRRGTYSGTPTRVAKLLKKQKGICPQCKQY--FTPE 535
Query 220 DGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
D +EV H+IP S GG DT +N AL +CH
Sbjct 536 D---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 565
> UniRef100_F9P945 HNH endonuclease domain protein n=1 Tax=Streptococcus
constellatus subsp. pharyngis SK1060 RepID=F9P945_STRCV
Length=124
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Query 177 RKPVEVERLQKVY--VRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLS 234
R P R +V+ VRD VK CE C K P EVHH+ PLS
Sbjct 42 RNPAVRRRYGRVWKRVRDAYVK------EHPFCEECFKKKILV-----PVEEVHHIKPLS 90
Query 235 SGGADTTDNCVALCPNCHRELHYSK 259
GG N ++LC +CH +H S+
Sbjct 91 EGGNHNKSNLISLCKSCHARIHASR 115
> UniRef100_B3Z1Y7 Gp45 n=1 Tax=Bacillus cereus W RepID=B3Z1Y7_BACCE
Length=375
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPL 233
+G K E RL+K R+ K ++L G C CG A + H+IP
Sbjct 108 DGLEKIREQNRLRKQKQREKE-KQYLLGNDMGTCAYCGDQAN----------TLDHLIPK 156
Query 234 SSGGADTTDNCVALCPNCH 252
S GG DT +NCV+ C C+
Sbjct 157 SHGGLDTQENCVSCCKQCN 175
> UniRef100_C4SNR8 HNH nuclease n=1 Tax=Yersinia frederiksenii
ATCC 33641 RepID=C4SNR8_YERFR
Length=298
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query 192 DPMVKAWILQQSKGICENCGKNAPFYL-NDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
DP V+ +L++ C NCG +D LE+HH+ GG +T +N + LC
Sbjct 215 DP-VRVKVLERDHHSCRNCGWQYQLKKPSDPRSLLELHHIEHHVDGGENTVENLITLCNV 273
Query 251 CHRELH 256
CH E+H
Sbjct 274 CHDEVH 279
> UniRef100_Q4BYS8 RNA-directed DNA polymerase (Reverse transcriptase):HNH
endonuclease n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4BYS8_CROWT
Length=596
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query 165 LIKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN 219
+++ T +PE S P + + + Y P A +L++ KGIC C + F
Sbjct 480 ILRHTWVKPEAS--PYDGNWTYWSKRRGTYSGTPTRVAKLLKKQKGICPQCKQY--FTPE 535
Query 220 DGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
D +EV H+IP S GG DT +N AL +CH
Sbjct 536 D---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 565
> UniRef100_Q4C7J9 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4C7J9_CROWT
Length=148
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKA 197
G+ + + T++ L +++ + L +P+ S P + + + Y P +
Sbjct 27 GKYGKWTFQTEEAVLYYHAETEIKRHQLVKPDAS--PYDGNWTYWSKRRGTYTGTPARVS 84
Query 198 WILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+L++ KGIC C ++ F D +EV H+IP S GG DT +N AL +CH
Sbjct 85 RLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGLDTYNNLQALHRHCH 134
> UniRef100_F4Y3Z1 RNA-directed DNA polymerase n=1 Tax=Lyngbya
majuscula 3L RepID=F4Y3Z1_9CYAN
Length=570
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query 152 TDDESLLNMRVSKLIKKTLSQPEGSRKPVE---VERLQKVYVRDPMV--KAWILQQSKGI 206
++D+ L +K+I+ + G R P + V L++V M K +L++ +G
Sbjct 454 SEDQFLPKHAKTKIIRH--KKVAGVRSPYDGNLVYWLERVRKHPEMTSQKGKLLKRQEGK 511
Query 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSK-NAKEL 264
C +CG DG+ +E HH++P + GG D N L +CH ++H + N+KEL
Sbjct 512 CTHCG----LTFRDGD-LMETHHILPRALGGKDNIGNLELLHLHCHDKIHGKQINSKEL 565
> UniRef100_C2LK08 Putative uncharacterized protein n=1 Tax=Proteus
mirabilis ATCC 29906 RepID=C2LK08_PROMI
Length=98
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
C CG F DG E+ H+IPL GG DT +NC LC CHR+
Sbjct 48 CAACGSLLAF--PDG---FELDHIIPLFKGGKDTIENCQVLCIECHRK 90
> UniRef100_Q5YZE7 Putative uncharacterized protein n=1 Tax=Nocardia
farcinica IFM 10152 RepID=Q5YZE7_NOCFA
Length=760
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
+KA + Q+ G C CG YLE H+IPLS GGA + N LC C+R
Sbjct 705 IKAEVWQRDGGRCVECGSGH---------YLEFDHIIPLSRGGATSAANLQILCRACNR 754
> UniRef100_B8G6B2 HNH endonuclease n=1 Tax=Chloroflexus aggregans
DSM 9485 RepID=B8G6B2_CHLAD
Length=174
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query 190 VRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCP 249
+R P + + + + C+ CGK G YL + HVIP S GG T +N V C
Sbjct 73 LRLPCSRRGVFARDRETCQYCGKQ------PGRAYLTMDHVIPRSQGGQTTWENVVTACR 126
Query 250 NC-HRE 254
+C HR+
Sbjct 127 DCNHRK 132
> UniRef100_D6TRJ9 HNH endonuclease n=1 Tax=Ktedonobacter racemifer
DSM 44963 RepID=D6TRJ9_9CHLR
Length=432
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query 195 VKAWILQQSKGICENC-GKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
KA++L + +C++C GK+ LEVHH+I S G+D N + LC CH
Sbjct 189 TKAYVLTRDGYLCQHCKGKSK-------ETRLEVHHIIFRSQNGSDEEANLLTLCKTCHD 241
Query 254 ELH 256
LH
Sbjct 242 GLH 244
> UniRef100_A4G659 Putative restriction endonuclease n=1 Tax=Herminiimonas
arsenicoxydans RepID=A4G659_HERAR
Length=269
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGAD---TTDNCVALCPNCHRELH 256
C+ C KN F G Y+E HH IP+SS + + + LCPNCH+ +H
Sbjct 194 CDVCQKN--FEKEYGVKYIEAHHKIPISSFSSKHPVKSSDFALLCPNCHKAIH 244
> UniRef100_F5VD18 Paclitaxel/taxanoid biosynthesis susceptibility
protein TS1 n=1 Tax=Lactobacillus salivarius NIAS840 RepID=F5VD18_9LACO
Length=434
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
VK ++L + C+ C K + ++HH+I S GG +T DN + +C NCH
Sbjct 186 VKQFVLARDNYTCQVCKKKGGKF--------KIHHIIYRSLGGTNTVDNLITVCSNCH 235
> UniRef100_Q8SDH4 Putative uncharacterized protein n=1 Tax=Lactobacillus
phage LL-H RepID=Q8SDH4_BPLLH
Length=112
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 15/84 (17%)
Query 173 PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIP 232
P+G R + + +++YVRD KGIC CGK+ F N + H+ P
Sbjct 26 PKGQRPKISKAKRKRIYVRD-----------KGICAYCGKHLEFKPNG----FHIDHIKP 70
Query 233 LSSGGADTTDNCVALCPNCHRELH 256
L+ GG + N C C+ H
Sbjct 71 LAKGGNNEDSNLTVSCRECNLSKH 94
> UniRef100_C3AIY7 Hnh endonuclease n=1 Tax=Bacillus mycoides RepID=C3AIY7_BACMY
Length=206
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query 204 KGICENCGKN-APFYLNDGNPYLEVHHVIPLSS---GGADTTDNCVALCPNCHRELHYSK 259
K CE C + Y G Y+E HHVIP+S G ++ + +C NCHR LH K
Sbjct 132 KLFCEICKFDYKEKYGELGEDYIEGHHVIPVSELEEGSKTKVEDIILVCANCHRMLHRKK 191
Query 260 ---NAKELIEMLYVN 271
+ ++L E+L+ N
Sbjct 192 PWLSKEQLKEILHSN 206
> UniRef100_F5VFX5 Paclitaxel/taxanoid biosynthesis susceptibility
protein TS1 n=1 Tax=Lactobacillus salivarius NIAS840 RepID=F5VFX5_9LACO
Length=318
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
VK ++L + C+ C K L++HH+I S GG +T DN + +C NCH
Sbjct 186 VKQFVLARDNYTCQVCKKKGG--------KLKIHHIIYRSLGGTNTVDNLITVCSNCH 235
> UniRef100_A8ZKQ7 RNA-directed DNA polymerase n=1 Tax=Acaryochloris
marina MBIC11017 RepID=A8ZKQ7_ACAM1
Length=576
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYS 258
+L++ KG C CG F+ + LEV H++P S GG D N L HR HY
Sbjct 512 LLKKQKGKCAQCGM---FFREED--LLEVDHILPTSMGGLDVYKNLQLL----HRHCHYV 562
Query 259 KNAKE 263
K AKE
Sbjct 563 KTAKE 567
> UniRef100_Q4BYQ4 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4BYQ4_CROWT
Length=175
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query 143 GELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKA 197
G+ + + T++ L +++ + L +P+ S P + + + Y P +
Sbjct 54 GKYGKWTFQTEEAVLYYHAETEIKRHQLVKPDAS--PYDGNWTYWSKRRGTYTGTPARVS 111
Query 198 WILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+L++ KGIC C ++ F D +EV H+IP S GG DT +N AL +CH
Sbjct 112 RLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGLDTYNNLQALHRHCH 161
> UniRef100_Q4C286 RNA-directed DNA polymerase (Reverse transcriptase):HNH
endonuclease n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C286_CROWT
Length=441
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P A +L++ KGIC C ++ F D +EV H+IP S GG DT +N AL +CH
Sbjct 373 PTRVAKLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGLDTYNNLQALHRHCH 427
> UniRef100_G1UPM8 Putative uncharacterized protein n=1 Tax=Desulfovibrio
sp. 6_1_46AFAA RepID=G1UPM8_9DELT
Length=284
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query 225 LEVHHVIPLSSGGADTTDNCVALCPNCHREL-HYS 258
+E+HH+ P S G+DT +NC+ LC +CH E+ HY+
Sbjct 30 IELHHIKPKSKSGSDTFENCIPLCFDCHAEVGHYN 64
> UniRef100_F3Q756 HNH endonuclease domain protein n=1 Tax=Klebsiella
sp. MS 92-3 RepID=F3Q756_9ENTR
Length=212
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query 167 KKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYL 225
+ T+ EG+ V V R Y RD + L+ C+ CG + A Y G ++
Sbjct 103 QTTMEFVEGAAMQVVVNR----YERDRQARQAALRLHGCRCQVCGLDMASRYGEIGQGFI 158
Query 226 EVHHVIPLSSGGADTTDN----CVALCPNCHRELH 256
+HH+IPLS D N + +CPNCH LH
Sbjct 159 HIHHLIPLSGIKQDYRLNPETDLIPVCPNCHAMLH 193
> UniRef100_A1F1U9 HNH endonuclease domain protein n=1 Tax=Vibrio
cholerae 2740-80 RepID=A1F1U9_VIBCH
Length=210
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 20/134 (14%)
Query 137 WASIIRGELSELSQPTD---DESLLNMRVSKL-------------IKKTLSQPEGSRKPV 180
W ++IR + +LS +D + L V+ L K P G+++P
Sbjct 39 WKAVIRRRIQDLSSDSDGFKNGQDLFYSVNGLGGGMWGLRNKLAYTPKAADLPTGTKEPE 98
Query 181 EVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSS--GGA 238
+RD + + C+ CG L +G Y E HH+IPL + G+
Sbjct 99 REYTTTYRVLRDTNLARKLKLLYNNSCQICG--LQIQLPNGKLYSEAHHIIPLGNPHHGS 156
Query 239 DTTDNCVALCPNCH 252
DT +N + LCPN H
Sbjct 157 DTPENIIVLCPNHH 170
> UniRef100_C4X2M1 Putative uncharacterized protein n=1 Tax=Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044 RepID=C4X2M1_KLEPN
Length=212
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query 167 KKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYL 225
+ T+ EG+ V V R Y RD + L+ C+ CG + A Y G ++
Sbjct 103 QTTMEFVEGAAMQVVVNR----YERDRQARQAALRLHGCRCQVCGLDMASRYGEIGQGFI 158
Query 226 EVHHVIPLSSGGADTTDN----CVALCPNCHRELH 256
+HH+IPLS D N + +CPNCH LH
Sbjct 159 HIHHLIPLSGIKQDYRLNPETDLIPVCPNCHAMLH 193
> UniRef100_B8ZRA7 Putative uncharacterized protein n=2 Tax=Mycobacterium
leprae RepID=B8ZRA7_MYCLB
Length=215
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query 190 VRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCP 249
R PM +A ++ + + C CG A V HV+P S GG + +NCVA C
Sbjct 114 ARVPMTRAALMHRDRFCCAYCGAKAD----------TVDHVVPRSRGGDHSWENCVACCS 163
Query 250 NCHRELHYSKNAKELIEMLYV 270
C ++ K K L E+ +V
Sbjct 164 TC----NHRKGDKLLTELGWV 180
> UniRef100_A5N0L8 Phage-related protein n=2 Tax=Clostridium kluyveri
RepID=A5N0L8_CLOK5
Length=119
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 16/82 (19%)
Query 181 EVERLQKVYVRDPMVK-----AWILQQSKGI-----CENCGKNAPFYLNDGNPYLEVHHV 230
E R +K Y RDP + AW + + I CE C + P EVHH+
Sbjct 30 EAARYEK-YDRDPATRKRYGRAWKRIRDRYIAAHPLCEECKRQGKL-----TPATEVHHI 83
Query 231 IPLSSGGADTTDNCVALCPNCH 252
+PL+ GG N ++LC +CH
Sbjct 84 LPLARGGTHDRSNLMSLCTSCH 105
> UniRef100_D6TZ06 HNH endonuclease n=1 Tax=Ktedonobacter racemifer
DSM 44963 RepID=D6TZ06_9CHLR
Length=432
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query 195 VKAWILQQSKGICENC-GKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
KA++L + +C+ C GK+ + LEVHH+I S G+D N + LC CH
Sbjct 189 TKAYVLTRDGYLCQQCKGKSK-------DRRLEVHHIIFRSRNGSDEEANLLTLCKTCHD 241
Query 254 ELH 256
LH
Sbjct 242 GLH 244
> UniRef100_B4SDY4 HNH nuclease n=1 Tax=Pelodictyon phaeoclathratiforme
BU-1 RepID=B4SDY4_PELPB
Length=309
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 0/58 (0%)
Query 199 ILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+LQ+ C+ CG + + +LE HH+ GG +T +N V LC CH + H
Sbjct 250 VLQRDDYRCQQCGWHQEMWNQSDPRHLEAHHIKQHVEGGENTKENLVTLCNICHDKEH 307
> UniRef100_A6THN6 Putative uncharacterized protein n=1 Tax=Klebsiella
pneumoniae subsp. pneumoniae MGH 78578 RepID=A6THN6_KLEP7
Length=212
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query 167 KKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYL 225
+ T+ EG+ V + R Y RD + L+ C+ CG + A Y G ++
Sbjct 103 QTTMEYVEGAAMQVVINR----YERDRQARQAALRLHGCRCQVCGLDMASRYGEIGQGFI 158
Query 226 EVHHVIPLSSGGADTTDN----CVALCPNCHRELH 256
+HH+IPLS D N + +CPNCH LH
Sbjct 159 HIHHLIPLSGIKQDYRLNPETDLIPVCPNCHAMLH 193
> UniRef100_F6CQN7 HNH endonuclease n=1 Tax=Desulfotomaculum kuznetsovii
DSM 6115 RepID=F6CQN7_DESK7
Length=388
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 0/32 (0%)
Query 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
L+ HH++P S GG+DT N V LC CHR++H
Sbjct 196 LQRHHLVPRSKGGSDTPMNQVVLCEKCHRKIH 227
> UniRef100_B9JB56 Putative uncharacterized protein n=1 Tax=Agrobacterium
radiobacter K84 RepID=B9JB56_AGRRK
Length=219
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query 171 SQPEGS--RKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVH 228
S+ EG+ K V R+ + V VKA L SK C+ CG + L DG Y E H
Sbjct 97 SEIEGAVLAKEVTTNRIIRDTVMTCKVKA--LHHSK--CQICGTS--ISLPDGRAYSEAH 150
Query 229 HVIPLSSG--GADTTDNCVALCPNCHREL 255
H+IPL + G D N + +CPN H L
Sbjct 151 HIIPLGAPHRGPDIPSNIIIVCPNHHAML 179
> UniRef100_Q1YWU8 Putative uncharacterized protein n=1 Tax=Photobacterium
profundum 3TCK RepID=Q1YWU8_PHOPR
Length=244
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query 171 SQPEGSRKPVEVERLQK-VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHH 229
S PEG K V + ++ R+ ++ + L S +CE + A Y G ++ VHH
Sbjct 138 SFPEGMAKKVVINSFERNKTARNSCIEEYGLSCS--VCEFNFEKA--YGELGTGFIHVHH 193
Query 230 VIPLSSGG----ADTTDNCVALCPNCHRELHYSKNAKELIEM 267
V+ +SS G D + V +CPNCH LH K A + E+
Sbjct 194 VVDISSIGYAYQVDPKKDLVPVCPNCHAMLHKRKPAFTVQEL 235
> UniRef100_F4Y310 Group II catalytic intron n=1 Tax=Lyngbya majuscula
3L RepID=F4Y310_9CYAN
Length=327
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 0/39 (0%)
Query 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKE 263
+E HH+IP+ GG++ DN V L CH+ LH K K+
Sbjct 287 IETHHIIPIKEGGSNLADNLVHLHKACHKLLHGKKKTKQ 325
> UniRef100_A1REN7 HNH nuclease n=1 Tax=Shewanella sp. W3-18-1
RepID=A1REN7_SHESW
Length=387
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query 183 ERLQKVYVRDPMVKAWILQQSKGICENC---GKNAPFYLNDGNPYLEVHHVIPLSSGGAD 239
++L K + ++A ++ + C C G+ P LE+ + P + GG+
Sbjct 4 QKLNKRRIPSVAMRAKLIAKHNNQCAMCTISGEEIP---------LELASITPFNEGGSM 54
Query 240 TTDNCVALCPNCHRELHYSKNAKELIEMLY 269
T +N + LCPNCHR + E + LY
Sbjct 55 TEENFLLLCPNCHRYMTMGPKEIEFVNFLY 84
> UniRef100_Q3A0C0 HNH endonuclease family protein n=1 Tax=Pelobacter
carbinolicus DSM 2380 RepID=Q3A0C0_PELCD
Length=96
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query 184 RLQKVYVRDPMVKAWILQQ-SKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTD 242
R ++ RD W + + GIC CGK G L + H++PL GG T
Sbjct 12 RRERQKARDLRRSQWWKNRIATGICHYCGKQV------GARALTLDHIVPLVRGGRSTKG 65
Query 243 NCVALCPNC 251
NCVA C C
Sbjct 66 NCVAACKEC 74
> UniRef100_E7K1Z0 HNH endonuclease family protein n=1 Tax=Shigella
sonnei 53G RepID=E7K1Z0_SHISO
Length=247
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EG++K V V Y RDP + + C C N Y ++ VHH+ P
Sbjct 142 EGAKKQVTVNS----YERDPKARQACIDHHGTSCGCCEFNFEKVYGEHAKGFIHVHHIKP 197
Query 233 LSSGGADTTDN----CVALCPNCHRELHYSK---NAKELIEMLYVNINRL 275
L + G D N V LCPNCH +H + + L +L+ + N++
Sbjct 198 LHTVGEDYEVNPITDMVPLCPNCHAMVHRGNEVLSVESLKALLFKDSNKI 247
> UniRef100_D6U0E7 HNH endonuclease n=1 Tax=Ktedonobacter racemifer
DSM 44963 RepID=D6U0E7_9CHLR
Length=432
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query 195 VKAWILQQSKGICENC-GKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
KA++L + +C+ C GK+ + LEVHH+I S G+D N + LC CH
Sbjct 189 TKAYVLTRDGYLCQQCKGKSK-------DRRLEVHHIIFRSRNGSDEEANLLTLCKTCHD 241
Query 254 ELH 256
LH
Sbjct 242 GLH 244
> UniRef100_B4D4V1 HNH endonuclease n=1 Tax=Chthoniobacter flavus
Ellin428 RepID=B4D4V1_9BACT
Length=212
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query 160 MRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLN 219
+R +SQP S+ ++R+ ++ +RD + + + IC+ CG +
Sbjct 80 VRCDARAANDISQP--SQPDRVLQRISRI-IRDTAISSELKLLYDHICQLCGTQ--LVVC 134
Query 220 DGNPYLEVHHVIPLS--SGGADTTDNCVALCPNCHRELHYS 258
D Y E HH+ PL G+DT DN + +CPNCH L Y+
Sbjct 135 D-RLYSEAHHIRPLGRPHDGSDTRDNLLCVCPNCHVLLDYA 174
> UniRef100_D6U4W5 HNH endonuclease n=1 Tax=Ktedonobacter racemifer
DSM 44963 RepID=D6U4W5_9CHLR
Length=392
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query 195 VKAWILQQSKGICENC-GKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
KA++L + C++C GK+ + LEVHH+I S G+D N + LC CH
Sbjct 187 TKAYVLTRDGYTCQHCQGKSK-------DQRLEVHHIIFRSQHGSDEESNLLTLCKTCHD 239
Query 254 ELH 256
LH
Sbjct 240 ALH 242
> UniRef100_G4GH93 HNH endonuclease n=1 Tax=Natrinema pellirubrum
DSM 15624 RepID=G4GH93_9EURY
Length=285
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
++ +L++ C NC + L VHHV+P+S G + N V LC CHR
Sbjct 13 IREQVLERDNWTCRNCSDES---------NLVVHHVVPISDRGTNRLQNLVTLCRECHRA 63
Query 255 LH 256
H
Sbjct 64 AH 65
> UniRef100_B1MMU0 Probable HNH endonuclease n=1 Tax=Mycobacterium
abscessus ATCC 19977 RepID=B1MMU0_MYCA9
Length=183
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query 190 VRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCP 249
R PM +A ++ + + C CG A + HVIP S GGA + +NCVA C
Sbjct 82 ARVPMTRAALMHRDRFRCAYCGGRAD----------TIDHVIPRSKGGAHSWENCVACCS 131
Query 250 NC-HRE 254
+C HR+
Sbjct 132 SCNHRK 137
> UniRef100_A6FSB3 HNH nuclease n=1 Tax=Roseobacter sp. AzwK-3b
RepID=A6FSB3_9RHOB
Length=115
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query 196 KAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+AW ++++G CE CG LN G+ E H IP GG ++ +NCV LC CH
Sbjct 13 QAW--ERARGKCEECG----VKLNVGD-RREFDHRIPCGLGGDNSLENCVVLCAACH 62
> UniRef100_C8TC51 Putative uncharacterized protein n=1 Tax=Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8TC51_KLEPR
Length=212
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query 167 KKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYL 225
+ T+ EG+ V V R Y RD + L+ C+ CG + A Y + G ++
Sbjct 103 QTTMEFVEGAAMQVVVNR----YERDRQARQAALRLHGCRCQVCGLDMASRYGDIGQGFI 158
Query 226 EVHHVIPLSSGGADTTDN----CVALCPNCHRELH 256
+HH+IPL+ D N + +CPNCH LH
Sbjct 159 HIHHLIPLAGIKQDYRLNPETDLIPVCPNCHAMLH 193
> UniRef100_B1YFT2 HNH endonuclease n=1 Tax=Exiguobacterium sibiricum
255-15 RepID=B1YFT2_EXIS2
Length=418
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 14/81 (17%)
Query 195 VKAWILQQSKGICENC-GKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
V+ ++ + K +C++C GK+ LN VHH+ +GG D DN + LC CH+
Sbjct 182 VREYVFFRDKHMCQHCKGKSKDKILN-------VHHIESRRTGG-DAPDNLITLCETCHK 233
Query 254 ELHYSKNAKELIEMLYVNINR 274
++H KE +E L+ +R
Sbjct 234 KIH-----KENLEHLFQRKSR 249
> UniRef100_F4L7M9 RNA-directed DNA polymerase (Reverse transcriptase)
n=1 Tax=Haliscomenobacter hydrossis DSM 1100 RepID=F4L7M9_HALH1
Length=576
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R ++ W + KGIC C + N HH++ GG DT+DN + L P+
Sbjct 499 RKQLIYLW--NEQKGICPICQQRITTETGWHN-----HHIVWRVHGGKDTSDNRILLHPD 551
Query 251 CHRELH 256
CHR++H
Sbjct 552 CHRKVH 557
> UniRef100_Q4C2F9 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4C2F9_CROWT
Length=165
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query 188 VYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVAL 247
+Y PM + +L++ K IC C ++ F +D +EV H+IP S GG D DN AL
Sbjct 75 IYTGTPMRVSKLLKKQKDICPICKQH--FTPDD---LIEVDHIIPKSKGGKDRYDNLQAL 129
Query 248 CPNCH 252
+CH
Sbjct 130 HRHCH 134
> UniRef100_B0VJM1 Putative ATP dependant helicase yprA n=1 Tax=Candidatus
Cloacamonas acidaminovorans RepID=B0VJM1_CLOAI
Length=863
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 13/51 (25%)
Query 207 CENCGKNAPFYLNDGNPYLEVHHVIPL----SSGGADTTDNCVALCPNCHR 253
C NCG LEVHH+IP A+ DN VALCP CHR
Sbjct 698 CRNCGATGD---------LEVHHIIPFRRFEDPAEANEPDNLVALCPRCHR 739
> UniRef100_Q3Z7J0 HNH endonuclease domain protein n=1 Tax=Dehalococcoides
ethenogenes 195 RepID=Q3Z7J0_DEHE1
Length=115
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query 206 ICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSK 259
+CE C K + + EVHH+IPL+ GG + N ++LC +CH ++H+ +
Sbjct 64 LCEQCLKAGRYVAVE-----EVHHIIPLADGGTNEESNLMSLCRSCHEKIHHER 112
> UniRef100_B0MB23 Putative uncharacterized protein n=1 Tax=Anaerostipes
caccae DSM 14662 RepID=B0MB23_9FIRM
Length=99
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
P EVHH +PLS GG DN ++LC +CH ++H
Sbjct 47 PVDEVHHKLPLSEGGNHNKDNLISLCKSCHAKIH 80
> UniRef100_Q9R669 Group II SELF-splicing intron ORF (Fragments)
n=1 Tax=Azotobacter vinelandii RepID=Q9R669_AZOVI
Length=86
Score = 43.5 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 0/30 (0%)
Query 227 VHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+HH+I GG D DN V L PNCHR+LH
Sbjct 57 IHHIIKRHMGGGDELDNLVLLHPNCHRQLH 86
> UniRef100_F8J1B0 Putative HNH endonuclease n=1 Tax=Lactobacillus
phage JCL1032 RepID=F8J1B0_9CAUD
Length=132
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADT-----TDNCVALCP 249
++ +LQ+ +C+ C + L D VHH+ PL G D+ DN + +C
Sbjct 41 IRQQVLQRDMHLCQICKAEGRYTLGDT-----VHHIEPLRKTGDDSYKAFSMDNLITVCR 95
Query 250 NCHRELHYSKNAKELIEMLYV 270
CH LH K K ++ Y+
Sbjct 96 QCHNRLHREKGMKLQKKIRYI 116
> UniRef100_A9IAX2 Reverse transcriptase n=1 Tax=Bordetella petrii
DSM 12804 RepID=A9IAX2_BORPD
Length=571
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query 185 LQKVYVRDPMVKAWILQQSKG-ICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDN 243
+Q ++ R +VK W+ Q K ICE P G HH+ GG +T +N
Sbjct 492 VQSLHERRKLVKLWLAQDGKCLICEQ-----PITKETG---WHAHHIQRRVDGGKNTLEN 543
Query 244 CVALCPNCHRELH 256
V L PNCH +LH
Sbjct 544 LVLLHPNCHNQLH 556
> UniRef100_Q8YJX0 Alr8560 protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YJX0_NOSS1
Length=600
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query 157 LLNMRVSKLIKKTLSQPEGSRKPVEVE------RLQKVYVRDPMVKAWILQQSKGICENC 210
LL R +++++ Q +GSR P + + R+ K + P+ A +L+ KG C +C
Sbjct 481 LLKHRETRIVRHI--QVKGSRSPFDGDWVYWSSRMGK-HPEAPIRVATLLKMQKGKCTHC 537
Query 211 GKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
G F+ D +E+ H IP S GG D+ DN L +CH
Sbjct 538 G--LFFHHED---LMEIDHKIPRSQGGKDSYDNLQLLHGHCH 574
> UniRef100_B2JR48 Putative uncharacterized protein n=1 Tax=Burkholderia
phymatum STM815 RepID=B2JR48_BURP8
Length=106
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
V++W +C CG+ P D HH++P + GG +T VAL CHR+
Sbjct 6 VQSWYRPPQDEVCPLCGRTIPPEQRDE------HHMVPKAEGGRET----VALHRICHRQ 55
Query 255 LHYSKNAKELIEMLYVNINRL 275
LH + +EL Y +++RL
Sbjct 56 LHALFSERELA-TTYASVDRL 75
> UniRef100_A1KLG5 Putative uncharacterized protein BCG_2489c n=6
Tax=Mycobacterium tuberculosis complex RepID=A1KLG5_MYCBP
Length=222
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query 190 VRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCP 249
R PM +A ++ + + C CG A V HV+P S GGA + +NCVA C
Sbjct 121 ARVPMTRAALMHRDRFCCAYCGGKAD----------TVDHVVPRSRGGAHSWENCVACCS 170
Query 250 NC-HRE 254
C HR+
Sbjct 171 PCNHRK 176
> UniRef100_D5Y559 HNH endonuclease n=34 Tax=Mycobacterium tuberculosis
complex RepID=D5Y559_MYCTU
Length=222
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query 190 VRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCP 249
R PM +A ++ + + C CG A V HV+P S GGA + +NCVA C
Sbjct 121 ARVPMTRAALMHRDRFCCAYCGGKAD----------TVDHVVPRSRGGAHSWENCVACCS 170
Query 250 NC-HRE 254
C HR+
Sbjct 171 PCNHRK 176
> UniRef100_E6RQ53 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas
sp. SM9913 RepID=E6RQ53_PSEU9
Length=350
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EG+RK + V Y R+P + +++ C C + FY G Y+ VHH+ P
Sbjct 242 EGARKTITV----NAYERNPEARNLCIKEYGTRCCVCDFSFVEFYGKRGEGYIHVHHLTP 297
Query 233 LSSGGADTTDNCV----ALCPNCHRELHYSKN 260
+S ++ N + +CPNCH LH N
Sbjct 298 VSEIKSEYDINPIRDLRPVCPNCHAMLHRKGN 329
> UniRef100_UPI000225B7DE UPI000225B7DE related cluster n=1 Tax=unknown
RepID=UPI000225B7DE
Length=90
Score = 43.1 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query 194 MVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
+VK + Q+ KG C CG + L HH+ + GG T +N LC +CH
Sbjct 21 LVKLRVYQRDKGKCTECGTK--------DKKLHFHHIKHFADGGQHTVENLKLLCVSCHA 72
Query 254 ELHYSKNAKELIE 266
E H + L++
Sbjct 73 EAHKGETVYHLLK 85
> UniRef100_D9QQ21 HNH endonuclease n=1 Tax=Acetohalobium arabaticum
DSM 5501 RepID=D9QQ21_ACEAZ
Length=445
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
V+ ++L + C+ CG + G+P LEV H IP S GG D+ N C C+++
Sbjct 181 VREYLLYKHNHTCQYCGGES------GDPVLEVEHKIPSSRGGTDSIKNLTLSCKTCNQD 234
> UniRef100_C4XM37 Putative uncharacterized protein n=1 Tax=Desulfovibrio
magneticus RS-1 RepID=C4XM37_DESMR
Length=251
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query 185 LQKVYVRDPMVKAWILQQSKGI--------CENCGKNA-PFYLNDGNPYLEVHHVIPLSS 235
L K++V+ K+ I + K + CE CG + FY G + EVHH+ PLS
Sbjct 150 LTKIHVQRERSKSLIESKKKYVMNTCGVLECEVCGFSFHKFYGERGKNFAEVHHIKPLSY 209
Query 236 GGADTT---DNCVALCPNCHRELH 256
A+ + ++ +C NCHR +H
Sbjct 210 LDAEASTKIEDLAIVCSNCHRMIH 233
> UniRef100_B0MFF1 Putative uncharacterized protein n=1 Tax=Anaerostipes
caccae DSM 14662 RepID=B0MFF1_9FIRM
Length=179
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAK 262
P++EVHH+IP + G DT +N LC CH +L+ AK
Sbjct 25 PFVEVHHIIPQNEGDEDTIENAAPLCSRCH-DLYVDNPAK 63
> UniRef100_B2IX42 HNH endonuclease n=1 Tax=Nostoc punctiforme
PCC 73102 RepID=B2IX42_NOSP7
Length=95
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
P VK ++ ++ K C++CGK ++ + H+IPL+ GG + N LC C+
Sbjct 25 PEVKKYVFERDKYQCQSCGKTT------TETHISIDHIIPLARGGQNDISNLQTLCLTCN 78
Query 253 RE 254
++
Sbjct 79 QQ 80
> UniRef100_A4BER6 Putative uncharacterized protein n=1 Tax=Reinekea
blandensis MED297 RepID=A4BER6_9GAMM
Length=446
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 0/30 (0%)
Query 227 VHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+HHV+ GG+D DN V L PNCHR+ H
Sbjct 413 IHHVVEKHRGGSDQLDNLVLLHPNCHRQFH 442
> UniRef100_B8I0D2 HNH endonuclease n=1 Tax=Clostridium cellulolyticum
H10 RepID=B8I0D2_CLOCE
Length=177
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 35/166 (21%)
Query 109 RTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNM---RVSKL 165
+ G K +P N+ KR +W S+ + Q +D L M R K
Sbjct 7 KEGEKNLPYNNKGKR------------YWLSL----WNYAKQYPNDNILYQMPDYRADKN 50
Query 166 IKKTLSQPEGSRK---------PVEVERLQKVYVRDPMVKAW-ILQQSKGICENCGKNAP 215
K Q S++ +E +RL V+ R + IL + C+ CG A
Sbjct 51 TCKWCGQSLKSKRQQSYCCEDCKIEFQRL-AVWGRGVAPLPYRILCRDNFTCKECGLFAA 109
Query 216 FYLNDG-----NPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+ G L+VHH+I +S GG D +N + +C +CH ++H
Sbjct 110 YKNKHGLFVPIAVGLDVHHLIQVSEGGTDQQNNLITICNDCHNQIH 155
> UniRef100_Q2FQI6 HNH endonuclease n=1 Tax=Methanospirillum hungatei
JF-1 RepID=Q2FQI6_METHJ
Length=163
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query 194 MVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
+++ IL++ C+ CG+ L VHH+IPLS GG T N LC +CH+
Sbjct 61 VIRRQILERDGYRCQICGEQRD---------LSVHHIIPLSEGGDSTASNLRVLCHSCHQ 111
Query 254 ELHYSKNAKE 263
+ H + ++
Sbjct 112 QAHGKRAVRD 121
> UniRef100_C4K4G6 Group II intron encoded reverse transcriptase
n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum) RepID=C4K4G6_HAMD5
Length=560
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VK + ++ KG C C + D L VHH+ P + GG + N L NCHR+
Sbjct 496 VKVNLYKRQKGYCPLCDQEL-----DNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQ 550
Query 255 LHYSKNAKEL 264
LH SK K L
Sbjct 551 LH-SKKGKML 559
> UniRef100_D7CEJ3 HNH endonuclease n=1 Tax=Streptomyces bingchenggensis
BCW-1 RepID=D7CEJ3_STRBB
Length=245
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query 207 CENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTT--DNCVALCPNCHRELH 256
CE C + FY G Y+EVHHV+PL G T D+ LC NCHR H
Sbjct 170 CEVCRFHFGRFYGRLGEGYIEVHHVLPLHISGPRETQLDDLALLCSNCHRMCH 222
> UniRef100_A7I926 HNH endonuclease n=1 Tax=Methanoregula boonei
6A8 RepID=A7I926_METB6
Length=266
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 18/118 (15%)
Query 155 ESLLNMRVSKLIKKTLSQ-------PEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGIC 207
ES ++ ++ K+TL++ PE + E E +Q +Y R+ ++ ++ C
Sbjct 134 ESEWDILSKEIEKRTLTKYEEIFTCPEYFTEGKEREIIQTIYERNSKLREMAIKMHGTTC 193
Query 208 ENCGKN-APFY--LNDGNPYLEVHHVIPLSS------GGADTTDNCVALCPNCHRELH 256
CG N A Y L++G Y+E+HH++P S + + + LC NCHR +H
Sbjct 194 SVCGFNFAKKYGILSEG--YIEIHHLVPHSEHKIKGESEINPETDLIPLCSNCHRIIH 249
> UniRef100_C3M8C3 Group II intron encoded reverse transcriptase
n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum) RepID=C3M8C3_HAMD5
Length=560
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VK + ++ KG C C + D L VHH+ P + GG + N L NCHR+
Sbjct 496 VKVNLYKRQKGYCPLCDQEL-----DNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQ 550
Query 255 LHYSKNAKEL 264
LH SK K L
Sbjct 551 LH-SKKGKML 559
> UniRef100_C4K5R2 Group II intron encoded reverse transcriptase
n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum) RepID=C4K5R2_HAMD5
Length=560
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VK + ++ KG C C + D L VHH+ P + GG + N L NCHR+
Sbjct 496 VKVNLYKRQKGYCPLCDQEL-----DNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQ 550
Query 255 LHYSKNAKEL 264
LH SK K L
Sbjct 551 LH-SKKGKML 559
> UniRef100_C4K431 Group II intron encoded reverse transcriptase
n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum) RepID=C4K431_HAMD5
Length=560
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VK + ++ KG C C + D L VHH+ P + GG + N L NCHR+
Sbjct 496 VKVNLYKRQKGYCPLCDQEL-----DNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQ 550
Query 255 LHYSKNAKEL 264
LH SK K L
Sbjct 551 LH-SKKGKML 559
> UniRef100_G4GBX0 HNH endonuclease n=1 Tax=Natronobacterium gregoryi
SP2 RepID=G4GBX0_9EURY
Length=413
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query 167 KKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCG--KNAPFYLNDGNPY 224
++ +Q + P +E + VR+ + + + +C+ CG + P +G+PY
Sbjct 275 RQEPAQDLATPDPDRIETTRSRVVRNTELTHDMKRMYNHMCQICGSSRRGP----NGDPY 330
Query 225 LEVHHVIPLSS--GGADTTDNCVALCPNCHRELHYSK 259
E HH+ PL G D +N + LCPN H + Y +
Sbjct 331 AEAHHIRPLGRPHDGPDEPENILVLCPNHHTDFDYGR 367
> UniRef100_C4K551 Group II intron encoded reverse transcriptase
n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum) RepID=C4K551_HAMD5
Length=560
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VK + ++ KG C C + D L VHH+ P + GG + N L NCHR+
Sbjct 496 VKVNLYKRQKGYCPLCDQEL-----DNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQ 550
Query 255 LHYSKNAKEL 264
LH SK K L
Sbjct 551 LH-SKKGKML 559
> UniRef100_C4F8E8 Putative uncharacterized protein n=1 Tax=Collinsella
intestinalis DSM 13280 RepID=C4F8E8_9ACTN
Length=154
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query 174 EGSRKPVEVERLQKVYVRD--PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVI 231
+G +KP+ R + P ++ +L++ C+ CG AP + L V H++
Sbjct 62 DGKKKPMRARRSSGAERKPLPPRIRYEVLERDGYTCQYCGAKAP------SVTLHVDHIV 115
Query 232 PLSSGGADTTDNCVALCPNCH 252
P++ GG D N VA C C+
Sbjct 116 PVAEGGTDDLSNLVAACEYCN 136
> UniRef100_E5X4Y0 HNH endonuclease n=1 Tax=Eggerthella sp. 1_3_56FAA
RepID=E5X4Y0_9ACTN
Length=222
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query 182 VERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLS-SGGA- 238
VER Y R P + L+ C CG + + + + +EVHH+ PLS S G
Sbjct 122 VERRSVAYERSPQARRACLRHYGCKCSICGIDFGKEFGEEFSGVIEVHHLEPLSLSKGER 181
Query 239 --DTTDNCVALCPNCHRELH 256
D + V LCPNCH+ +H
Sbjct 182 EIDPIKDLVPLCPNCHKMVH 201
> UniRef100_A5P8I1 Putative uncharacterized protein n=1 Tax=Erythrobacter
sp. SD-21 RepID=A5P8I1_9SPHN
Length=274
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query 207 CENCGKNAPFYLNDGNPYLEVHHVIPLSSGGA----DTTDNCVALCPNCHRELHYSK 259
C+ C + D +EVHH+ PLS G D + + LCPNCHR +H +
Sbjct 202 CKICSLSPGQLYGDAGAIIEVHHLQPLSLVGEPRPYDPATDLIPLCPNCHRAVHTRR 258
> UniRef100_B5Y2L5 HNH endonuclease domain protein n=1 Tax=Klebsiella
pneumoniae 342 RepID=B5Y2L5_KLEP3
Length=212
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query 167 KKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYL 225
+ T+ EG+ V V R Y RD + L+ C+ CG + A Y + G ++
Sbjct 103 QTTMEYVEGAAMQVVVNR----YERDRQARQAALRLHGCRCQVCGLDMASRYGDIGQGFI 158
Query 226 EVHHVIPLSSGGADTTDN----CVALCPNCHRELH 256
+HH+IPL D N + +CPNCH LH
Sbjct 159 HIHHLIPLYGIKQDYRLNPETDLIPVCPNCHAMLH 193
> UniRef100_D6U8M0 HNH endonuclease n=1 Tax=Ktedonobacter racemifer
DSM 44963 RepID=D6U8M0_9CHLR
Length=417
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query 195 VKAWILQQSKGICENC-GKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
KA++L + + C++C GK+ + LEVHH+I S G+D N + LC CH
Sbjct 189 TKAYVLTRDEYTCQHCRGKSK-------DRRLEVHHIIFRSQWGSDEEANLLTLCKTCHD 241
Query 254 ELH 256
LH
Sbjct 242 GLH 244
> UniRef100_Q82CY5 Putative uncharacterized protein n=1 Tax=Streptomyces
avermitilis RepID=Q82CY5_STRAW
Length=177
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query 184 RLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSG--GADTT 241
R+Q++ VRD V + G C+ CG DG PY E H+ PL G D
Sbjct 50 RIQRL-VRDAAVSRNVKDLYGGECQACGLR--LVGPDGRPYSEGAHIRPLGKPHCGPDVE 106
Query 242 DNCVALCPNCHREL 255
N + LCPNCH L
Sbjct 107 PNVLCLCPNCHVRL 120
> UniRef100_F0HLS5 HNH endonuclease domain protein n=1 Tax=Eggerthella
sp. HGA1 RepID=F0HLS5_9ACTN
Length=368
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query 182 VERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLS-SGGA- 238
VER Y R P + L+ C CG + + + + +EVHH+ PLS S G
Sbjct 268 VERRSVAYERSPQARRACLRHYGCKCSICGIDFGKEFGEEFSGVIEVHHLEPLSLSKGER 327
Query 239 --DTTDNCVALCPNCHRELH 256
D + V LCPNCH+ +H
Sbjct 328 EIDPIKDLVPLCPNCHKMVH 347
> UniRef100_A9B2D5 HNH endonuclease n=1 Tax=Herpetosiphon aurantiacus
DSM 785 RepID=A9B2D5_HERA2
Length=321
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
VK + Q+ +G C CG + YLE H+IP S GGA+T N LC C+
Sbjct 266 VKLAVWQRDQGKCTQCGDAS---------YLEFDHIIPHSKGGANTVGNVQLLCRKCN 314
> UniRef100_B9MNG3 HNH endonuclease n=1 Tax=Caldicellulosiruptor
bescii DSM 6725 RepID=B9MNG3_ANATD
Length=443
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VK ++L++ C CG G P LEV HVIP S GG D DN V C C+++
Sbjct 183 VKEYLLEKFNWRCVYCGAT-------GVP-LEVEHVIPKSRGGTDRVDNLVIACHGCNQK 234
Query 255 LHYSKNAKELIEMLYVNINRLQK 277
K K E Y I +L K
Sbjct 235 ----KGNKTAEEFGYPEIQKLVK 253
> UniRef100_E4SYR6 Paclitaxel/taxanoid biosynthesis susceptibility
protein TS1 n=1 Tax=Lactobacillus delbrueckii subsp. bulgaricus
ND02 RepID=E4SYR6_LACDN
Length=301
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query 196 KAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
K ++L + + C+ C K+ L VHH++ S GG D DN + LC NCH
Sbjct 51 KYYVLARDEYTCQLCHKHGE------GVKLVVHHIVYRSQGGTDRVDNLITLCTNCH 101
> UniRef100_B7GM48 Restriction endonuclease, McrA/HNH family, phage
related n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GM48_ANOFW
Length=92
Score = 42.7 bits (99), Expect = 0.069, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 13/73 (17%)
Query 204 KGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKE 263
KG+CE CG+ + L VHH+ P GG +T LC CH+++H +E
Sbjct 2 KGMCELCGRE--------DVVLTVHHLTPKEYGGTETAK----LCIPCHKQIHALYTNEE 49
Query 264 LIEMLYVNINRLQ 276
L LY I +LQ
Sbjct 50 LASRLY-TIEQLQ 61
> UniRef100_E9RVF4 Putative uncharacterized protein n=1 Tax=Lachnospiraceae
bacterium 4_1_37FAA RepID=E9RVF4_9FIRM
Length=124
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query 189 YVRDPMVKAWILQQSKGICENCGKNAPFY---LNDGN--PYLEVHHVIPLSSGGADTTDN 243
Y RDP V+ + K I ++ K PF G P EVHH +PL+ GG N
Sbjct 37 YDRDPAVRRRYGRVWKRIRDSYVKTHPFCELCFEKGVIVPVEEVHHKVPLAEGGTHDRSN 96
Query 244 CVALCPNCHRELHYSK 259
++LC +CH ++H +
Sbjct 97 LISLCKSCHAQIHAKR 112
> UniRef100_B5CRX9 Putative uncharacterized protein n=1 Tax=Ruminococcus
lactaris ATCC 29176 RepID=B5CRX9_9FIRM
Length=101
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 0/34 (0%)
Query 223 PYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
P E+HH +PLS GG N +ALC +CH ++H
Sbjct 59 PVEEIHHKLPLSEGGTHDRSNLIALCKSCHSQIH 92
> UniRef100_F5LC98 HNH endonuclease domain protein n=1 Tax=Paenibacillus
sp. HGF7 RepID=F5LC98_9BACL
Length=419
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query 195 VKAWILQQSKGICENC-GKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
V ++L + K IC+ C GK LN VHH+ +GG D DN + LC CH
Sbjct 182 VHEYVLFRDKHICQRCKGKKKDKILN-------VHHIESRKTGG-DRPDNLITLCETCHN 233
Query 254 ELH 256
E+H
Sbjct 234 EIH 236
> UniRef100_F2AIG2 HNH endonuclease n=1 Tax=Rhizobium etli CNPAF512
RepID=F2AIG2_RHIET
Length=301
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query 199 ILQQSKG-----ICENCGKN-APFYLNDGNPYLEVHHVIPLSSGGADTT----DNCVALC 248
I+Q +K ICE CG + Y G ++E HH+ PL+ D + LC
Sbjct 215 IVQMAKAAAKPLICEACGFDFEKVYGTHGKGFIEAHHINPLNEREGDNQPTGIQDFAMLC 274
Query 249 PNCHRELHYSKNAKELIEM 267
NCHR HY + E+
Sbjct 275 ANCHRMAHYGSECLTVAEL 293
> UniRef100_D5PH47 HNH endonuclease n=1 Tax=Mycobacterium parascrofulaceum
ATCC BAA-614 RepID=D5PH47_9MYCO
Length=166
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R PM +A ++ + + C CG A V HV+P S GG + +NCVA C
Sbjct 66 RVPMTRAALMHRDRFSCAYCGAKAD----------TVDHVVPRSRGGDHSWENCVACCST 115
Query 251 CHRELHYSKNAKELIEMLYV 270
C ++ K K L E+ +V
Sbjct 116 C----NHRKGDKLLTELGWV 131
> UniRef100_E6U9R5 HNH endonuclease n=1 Tax=Ethanoligenens harbinense
YUAN-3 RepID=E6U9R5_ETHHY
Length=117
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query 206 ICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
+CE C K + + EVHH++PLS GG + N ++LC +CH ++H
Sbjct 66 LCEMCLKQGRYVAVE-----EVHHIVPLSEGGTNDESNLMSLCRSCHEKIH 111
> UniRef100_C4K5N9 Group II intron encoded reverse transcriptase
n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum) RepID=C4K5N9_HAMD5
Length=570
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query 195 VKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRE 254
VK + ++ KG C C + D L VHH+ P + GG + N L NCHR+
Sbjct 496 VKVNLYKRQKGYCPLCDQEL-----DNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQ 550
Query 255 LHYSK 259
LH K
Sbjct 551 LHSKK 555
> UniRef100_B4SCA5 HNH nuclease n=1 Tax=Pelodictyon phaeoclathratiforme
BU-1 RepID=B4SCA5_PELPB
Length=340
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 6/118 (5%)
Query 142 RGELSELSQ-PTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERL---QKVYVRDPMVKA 197
+ EL SQ + E L IK+ + + +P + E + +K Y RD A
Sbjct 193 KFELPYCSQDEKEQEELAQFYKQAKIKEEILDELNNLQPSDSEEIIVNKKTYKRDNKTIA 252
Query 198 WILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHREL 255
I C+ CG D + Y+E H+ G +T DN + LCPN H+E
Sbjct 253 QIKILRDFKCQICG--VTITKKDRSKYIEAAHIKAKHQKGRETIDNIILLCPNHHKEF 308
> UniRef100_C3H0B3 Putative uncharacterized protein n=1 Tax=Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1 RepID=C3H0B3_BACTU
Length=130
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query 200 LQQSKGICENCGKNA-PFYLNDGNPYLEVHHVIPLSS---GGADTTDNCVALCPNCHREL 255
L K CE CG + Y G ++E HH +P+S G ++ + +C NCHR L
Sbjct 52 LHGGKLFCEVCGFDFYKAYGELGKDFIEGHHTVPVSELKEGSVTKVEDIIMVCANCHRVL 111
Query 256 HYSKN--AKELIEML 268
H K +KE +++L
Sbjct 112 HRKKPWLSKEELQLL 126
> UniRef100_E0RZ58 HNH endonuclease domain-containing protein n=1
Tax=Butyrivibrio proteoclasticus B316 RepID=E0RZ58_BUTPB
Length=100
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R +K +L ++ G+C CG+ PF + H IP GG D N + LC N
Sbjct 7 RKAEIKRIVLGKTDGVCARCGRPIPF------EKATIEHFIPKYRGGTDDERNLLPLCKN 60
Query 251 CHRE 254
C+++
Sbjct 61 CNKQ 64
> UniRef100_UPI0001FFE105 HNH endonuclease n=1 Tax=Pseudonocardia
sp. P1 RepID=UPI0001FFE105
Length=217
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 15/74 (20%)
Query 193 PMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
PM +A +L++ C C K A + HVIP S GGA + +NCVA C C+
Sbjct 121 PMTRAGVLRRDSRRCAYCTKRA----------DTIDHVIPRSRGGAHSWENCVAACKACN 170
Query 253 RELHYSKNAKELIE 266
S+ A L+E
Sbjct 171 -----SRKADRLVE 179
> UniRef100_UPI0001AF68B0 hypothetical protein MkanA1_16649 n=1
Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF68B0
Length=224
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 14/78 (17%)
Query 190 VRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCP 249
R PM +A ++ + + C CG A V HV+P S GG + +NCVA C
Sbjct 123 ARVPMTRAALMHRDRFCCAYCGAKAD----------TVDHVVPRSRGGEHSWENCVACCS 172
Query 250 NCHRELHYSKNAKELIEM 267
C ++ K K L E+
Sbjct 173 TC----NHRKGDKLLTEL 186
> UniRef100_D8FLX6 HNH endonuclease domain protein n=1 Tax=Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4 RepID=D8FLX6_LACDE
Length=442
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query 198 WILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
++L + + C+ C K+ L VHH++ S GG D DN + LC NCH
Sbjct 194 YVLARDEYTCQLCHKHGE------GVKLVVHHIVYRSQGGTDRVDNLITLCTNCH 242
> UniRef100_Q4C2H4 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4C2H4_CROWT
Length=95
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query 189 YVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALC 248
Y P A +L++ KGIC C ++ F +D +EV H+IP S GG D +N AL
Sbjct 6 YTGTPTRVAKLLKKQKGICPQCKQH--FTPDD---LIEVDHIIPKSKGGKDEFNNLQALH 60
Query 249 PNCH 252
+CH
Sbjct 61 RHCH 64
> UniRef100_E5CFK9 HNH endonuclease n=1 Tax=Bacteroides sp. D2
RepID=E5CFK9_9BACE
Length=198
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query 191 RDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLSSGGA----DTTDNCV 245
R+ ++ L+ C+ CG N Y G Y+EVHH+ P++ D +
Sbjct 108 RNQALRQLCLKHYGYTCQVCGMNFEAVYGKLGKNYIEVHHINPIAETDGEHVLDPKTGLI 167
Query 246 ALCPNCHRELHYSKNAKEL 264
LC NCH +H KN + L
Sbjct 168 PLCSNCHSMIHRGKNGRVL 186
> UniRef100_Q4C417 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4C417_CROWT
Length=104
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query 185 LQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNC 244
++ Y P + +L++ KGIC C ++ F D +EV H+IP S GG DT +N
Sbjct 11 IRGAYTGTPNRVSKLLKKQKGICPQCKQH--FTPED---LIEVDHIIPKSKGGKDTYNNL 65
Query 245 VALCPNCH 252
AL +CH
Sbjct 66 QALHRHCH 73
> UniRef100_Q4BUJ8 HNH endonuclease n=1 Tax=Crocosphaera watsonii
WH 8501 RepID=Q4BUJ8_CROWT
Length=116
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query 166 IKKTLSQPEGSRKPVE-----VERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLND 220
++ T +PE S P + + + Y P A +L++ KGIC C + F D
Sbjct 1 MRHTWVKPEAS--PYDGNWTYWSKRRGTYSGTPTRVAKLLKKQKGICPQCKQY--FTPED 56
Query 221 GNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+EV H+IP S GG DT +N AL +CH
Sbjct 57 ---LIEVDHIIPKSKGGKDTYNNLQALHRHCH 85
> UniRef100_Q21AN9 HNH endonuclease n=1 Tax=Rhodopseudomonas palustris
BisB18 RepID=Q21AN9_RHOPB
Length=200
Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 0/32 (0%)
Query 225 LEVHHVIPLSSGGADTTDNCVALCPNCHRELH 256
L++HH+ +S+GG D + N +ALCP CH H
Sbjct 39 LDMHHIWEVSAGGTDDSSNLIALCPTCHALYH 70
> UniRef100_D1A409 HNH endonuclease n=1 Tax=Thermomonospora curvata
DSM 43183 RepID=D1A409_THECD
Length=146
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
Query 191 RDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPN 250
R P + + + +G+C CGK P V H++PLS GG DT +N V C
Sbjct 65 RPPWSRRGVRLRDRGLCAYCGK----------PGNTVDHIVPLSRGGGDTWENTVLACGR 114
Query 251 CH 252
C+
Sbjct 115 CN 116
> UniRef100_F5L4X5 HNH endonuclease n=1 Tax=Caldalkalibacillus
thermarum TA2.A1 RepID=F5L4X5_9BACI
Length=283
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Query 195 VKAWILQQSKGICENCG-KNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR 253
VK ++L++ C C +N PF E+ HVIP S GG+D N V C +C+R
Sbjct 38 VKEYLLEKFGRRCVYCDVENVPF---------EIEHVIPRSKGGSDRVSNLVIACHDCNR 88
Query 254 ELHYSKNAKELIEML 268
E K+ + L E L
Sbjct 89 E----KDNRSLEEFL 99
> UniRef100_D6HN55 HNH endonuclease domain protein n=1 Tax=Erysipelotrichaceae
bacterium 5_2_54FAA RepID=D6HN55_9FIRM
Length=120
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query 180 VEVERLQKVYVRDPMVK-----AW-----ILQQSKGICENCGKNAPFYLNDGNPYLEVHH 229
E +R ++ Y RDP K AW + +CE C + + P E+HH
Sbjct 29 AEAKRYER-YERDPATKRRYGRAWKRIRDSYAAAHPLCEVCLEKGVY-----TPTEEIHH 82
Query 230 VIPLSSGGADTTDNCVALCPNCHRELH 256
+ PLS GG +N ALC CH +H
Sbjct 83 MKPLSQGGTHDRENLKALCKACHARIH 109
> UniRef100_B0N9V8 Putative uncharacterized protein n=1 Tax=Clostridium
scindens ATCC 35704 RepID=B0N9V8_EUBSP
Length=124
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query 180 VEVERLQKVYVRDPMVK-----AWI-----LQQSKGICENCGKNAPFYLNDGNPYLEVHH 229
+E +R +K Y RDP K AW + +CE C ++ + +VHH
Sbjct 29 LENQRYEK-YGRDPAAKRRYGRAWKRIRDRYMNAHPLCEQCQRDGRLVKAE-----QVHH 82
Query 230 VIPLSSGGADTTDNCVALCPNCHRELHYSKNAK 262
+ PL+ GG +N ++LC CH +H + +
Sbjct 83 IKPLAEGGTHEENNLLSLCKECHARIHAKRGER 115
> UniRef100_Q67M53 Conserved domain protein n=1 Tax=Symbiobacterium
thermophilum RepID=Q67M53_SYMTH
Length=270
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query 182 VERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIPLSS--GGA 238
VE + Y RDP + ++ C CG N Y G ++EVHHV PL + G A
Sbjct 159 VEYYGRRYERDPENRRRAIEIHGLNCVVCGFNFEEVYGPRGRDFIEVHHVKPLKAFEGVA 218
Query 239 DTTD---NCVALCPNCHRELH 256
D + V +C NCHR +H
Sbjct 219 QVVDPKVDLVPICANCHRMIH 239
> UniRef100_E8LX13 Putative uncharacterized protein n=1 Tax=Vibrio
brasiliensis LMG 20546 RepID=E8LX13_9VIBR
Length=253
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query 174 EGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKN-APFYLNDGNPYLEVHHVIP 232
EG+ K V V Y R+ + +++ C C N A FY + + ++ VHHV P
Sbjct 149 EGATKKVIVN----AYERNLEARNDCIKEHGVSCLVCDFNFADFYGPEASGFIHVHHVKP 204
Query 233 LSSGG----ADTTDNCVALCPNCHRELHYSKNAKELIEM 267
LS G D ++ + +CPNCH LH KNA + ++
Sbjct 205 LSEIGEEYKVDPINDLIPVCPNCHAMLH-RKNAPTVEQL 242
> UniRef100_D1NK18 HNH endonuclease n=1 Tax=Clostridium thermocellum
JW20 RepID=D1NK18_CLOTM
Length=119
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query 206 ICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH 252
+CE C K P EVHH+IPLS GG + N ++LC CH
Sbjct 64 LCEECQKYGSL-----TPAEEVHHIIPLSRGGTNADSNLMSLCKQCH 105
Lambda K H
0.318 0.137 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 461512430646
Database: uniref100
Posted date: Feb 1, 2012 5:10 AM
Number of letters in database: 5,427,816,372
Number of sequences in database: 15,272,341
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40